Rmu_sc0002773.1_g000008

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002773.1
OG0000349
Physical Location & Seq
Forward (+)
19163 .. 23302
4140 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002773.1_g000008.1.cds

Sequence Viewer

Length: 2124 bp
atgccaaacccgagtctgggccttgggctcaaacccgaactatccctcggcctttgtcagttgcagaagcaattctacaataaagcaccatttctcagaaaatccaggaaacccaaaaccccaatggaagcgacgacgatgactaatcggaaccctaatcgaagcctaaacgacctccccgacgaaatcctcctccacatcctgagcttcttcccgaccctcgacgccgtccagacctccctaatctcccgcaaatggcgacccctctggtcccgcctccgcttcctcaaattctcctacgagcacttccccctaaacgacccgccctccgataaccgcgacttcttcgccgagttcgtcgaccgcgccctcattctccggccccactcccccgtcgacctcttctccctctccttcatctaccacgaccgcttcggcttccacgtcgactcctgggtccgctgcgccgtcacgctcctccacgcgcgtgagctccacctcgacttcttcatcgaccgggagtaccaccagaccgacgagaccttcaaccacaagtacgatttccctttcgccgtcctcagaaatggcgccgtccgggtgttgaagctcacgcgcgtcgacctcaccttgccggcgagcatggccgccatggggctcgtctctctgagctcaatgtatctcgacgaggtctacttgacggaccagatggtgtgtgatttgatatcgggttgtccgaatctcgaggaattggagctccagaactgttggggaatggagaagatgaagatatgtagtaaaaagctgaagaagctggcgtttgcttatatatatgattcggataacaggaacacgattgagattgattgcccgaatttgtgttcgataagctttgataactgtagttttacacagtttgtgctcaagtttgcgccggccctggttgagtttagtgtcagcattgtgaggataatggagcaggactatggtttgtggagcaggattgtgaggctacttgagcaagcgccttatgtgaagcagcttaatttgcaaaattggtggtttaagcttcttacatcaatggatcctttctccaaaagttttatgcttcacaacctcaaccacttggagctgcgaacagggtatacccaatgtgatctgattggcttggcagcactgcttgagctttctcccaatctcaagaacatgactttagattatgtggaagatggtattttacctgaagagttctcaaacaaaccagatggattccacatgccaagtctgaggcaagtgaccatgaaatcatattctggaacaccagatgagaataattttgtaaatattttgaaaaagcatggggtggtcctagaaaagatagtaatccatcacatcaaagttggtgagaaatcattttctccggatacctgttcaataatcgatatgatgttagttcatcaggttatgaggaatatgattgaagaacttgccctctatgcctcctgtggtaacaagccttatgaccggtttcatttgtctcccagtgtattgaagtgtggttcattgaggagcctcacgttggaagctagagttagatatgagtcatcgaaattaatattacaaagactttttgggtttacaggagtcttcgctcgcttcactcctttgtttctaactaatgacgagttggttgtgcatttactttcgggctcttcattcccttgccttgggaaattgaccacaaacaagtgcaaaggaataatgagtactcctagctgtcctgggcatctcaaaatttgctgtcctcagctgaaagatgtacaagttgtgaaggtggtagataatctggagatatctggaatgggattggagaagttgcaagtcgaagaacgcttaagcaatggatcacccatctctgcccccaatcgagaatctctagattggatatttaatgaaatttttggtacatgttcagtcaagagcattgcatccctaagaagatgtcaaatatggttccctgcatccgcggctcatccgtcgagcttcggagtgctgttgatatcaatcatcttctcttctctcttccatatcccaagttcaacgcctttcgattcggaacgaccgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBD KIX_2

Protein Analysis

707

Amino Acids

80.74

Weight (kDa)

7.53

Isoelectric Point (pI)

42.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000349)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G43415
fragaria_vesca FvH4_1g28610 FvH4_6g43940 FvH4_6g43940 FvH4_6g43940 FvH4_6g43950 FvH4_6g43960 FvH4_6g43970 FvH4_6g43990 FvH4_6g44000 FvH4_7g14510
malus_domestica MD09G1101800.v1.1 MD17G1089200.v1.1 MD17G1089300.v1.1 MD17G1089400.v1.1 MD17G1089500.v1.1 MD17G1089600.v1.1
prunus_persica Prupe.3G223900_v2.0.a1 Prupe.3G223900_v2.0.a1 Prupe.3G224000_v2.0.a1 Prupe.3G224100_v2.0.a1 Prupe.3G224200_v2.0.a1
pyrus_communis pycom09g02550 pycom17g02610 pycom17g08610 pycom17g08620 pycom17g08630 pycom17g08640 pycom17g08670
rosa_chinensis RchiOBHm_Chr2g0160711 RchiOBHm_Chr2g0160721 RchiOBHm_Chr2g0160731 RchiOBHm_Chr2g0160741 RchiOBHm_Chr4g0433831 RchiOBHm_Chr7g0197991
rosa_laevigata RLG00000001614 RLG00000002340 RLG00000003895 RLG00000005223 RLG00000021235 RLG00000021236 RLG00000021237 RLG00000021238 RLG00000028664 RLG00000029542 RLG00000029654 RLG00000035034
rosa_multiflora Rmu_co8177938.1_g000001 Rmu_co8474907.1_g000002 Rmu_sc0000064.1_g000011 Rmu_sc0000221.1_g000038 Rmu_sc0002773.1_g000001 Rmu_sc0002773.1_g000004 Rmu_sc0002773.1_g000006 Rmu_sc0002773.1_g000008 Rmu_sc0003465.1_g000005 Rmu_sc0006325.1_g000010 Rmu_sc0024525.1_g000002 Rmu_sc0030848.1_g000001 Rmu_sc0030848.1_g000002 Rmu_sc0030848.1_g000004
rosa_roxburghii Rroxscaffold_2G00089410 Rroxscaffold_2G00089420 Rroxscaffold_2G00089430 Rroxscaffold_2G00089450 Rroxscaffold_2G00089460 Rroxscaffold_3G00258030 Rroxscaffold_5G00351500
rosa_rugosa Rorug02G0485200 Rorug02G0485400 Rorug02G0485500 Rorug02G0485600 Rorug06G0149200
rosa_samantha Rh1AG011000 Rh2AG501800 Rh2AG550200 Rh2AG550300 Rh2AG550400 Rh2AG550500 Rh2BG217000 Rh2BG564800 Rh2BG564900 Rh2BG565000 Rh2BG565100 Rh2BG607100 Rh2CG487700 Rh2CG534600 Rh2CG534700 Rh2CG534800 Rh2CG534900 Rh2DG573500 Rh2DG573600 Rh2DG574000 Rh2DG574100 Rh3CG290600 Rh7AG168600 Rh7BG171600 Rh7BG171700 Rh7CG178100 Rh7DG170700 Rh7DG170900
rosa_wichuraiana Rw2G022070 Rw2G045590 Rw2G045600 Rw2G045610 Rw2G045620 Rw3G021600 Rw7G014730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 455
AccB1I GGYRCC 1 cut(s) 587
AccI GTMKAC 6 cut(s) 360, 396, 447, 618, 690, 1142
AccII CGCG 7 cut(s) 339, 366, 485, 487, 613, 615, 2024
AccIII TCCGGA 1 cut(s) 1417
AclWI GGATC 3 cut(s) 1076, 1089, 1909
AcoI YGGCCR 1 cut(s) 642
AcsI RAATTY 4 cut(s) 290, 871, 1791, 1953
AcuI CTGAAG 2 cut(s) 824, 1260
AcyI GRCGYC 2 cut(s) 225, 588
AfaI GTAC 5 cut(s) 524, 557, 1765, 1818, 1963
AfiI CCNNNNNNNGG 6 cut(s) 16, 17, 255, 651, 1576, 1724
AflII CTTAAG 1 cut(s) 1891
AflIII ACRYGT 1 cut(s) 1964
AgeI ACCGGT 1 cut(s) 1521
AgsI TTSAA 7 cut(s) 547, 604, 1348, 1431, 1478, 1549, 2097
AjiI CACGTC 1 cut(s) 445
AjnI CCWGG 4 cut(s) 104, 452, 936, 1777
AleI CACNNNNGTG 1 cut(s) 486
Alw21I GWGCWC 5 cut(s) 306, 495, 671, 756, 921
Alw26I GTCTC 3 cut(s) 533, 664, 1539
AlwI GGATC 3 cut(s) 1076, 1089, 1909
Ama87I CYCGRG 2 cut(s) 10, 740
Aor13HI TCCGGA 1 cut(s) 1417
AoxI GGCC 5 cut(s) 19, 49, 380, 642, 933
ApeKI GCWGC 4 cut(s) 462, 1036, 1129, 1169
ApoI RAATTY 4 cut(s) 290, 871, 1791, 1953
AseI ATTAAT 1 cut(s) 1610
AsiGI ACCGGT 1 cut(s) 1521
Asp700I GAANNNNTTC 1 cut(s) 71
AspLEI GCGC 7 cut(s) 368, 467, 487, 590, 615, 931, 1024
AspS9I GGNCC 7 cut(s) 19, 270, 381, 457, 700, 934, 1363
AsuC2I CCSGG 2 cut(s) 518, 596
AsuHPI GGTGA 3 cut(s) 616, 1412, 1896
AvaI CYCGRG 2 cut(s) 10, 740
AvaII GGWCC 4 cut(s) 270, 457, 700, 1363
BamHI GGATCC 1 cut(s) 1081
BanI GGYRCC 1 cut(s) 587
BanII GRGCYC 6 cut(s) 30, 495, 657, 671, 756, 1709
BarI GAAGNNNNNNTAC 2 cut(s) 59, 91
BbsI GAAGAC 1 cut(s) 1636
Bbv12I GWGCWC 5 cut(s) 306, 495, 671, 756, 921
BbvCI CCTCAGC 1 cut(s) 1803
BbvI GCAGC 4 cut(s) 449, 1048, 1116, 1181
BccI CCATC 5 cut(s) 700, 1220, 1256, 1392, 1916
BceAI ACGGC 4 cut(s) 212, 452, 557, 575
BciT130I CCWGG 4 cut(s) 106, 454, 938, 1779
BciVI GTATCC 1 cut(s) 1414
BcnI CCSGG 2 cut(s) 518, 596
BcoDI GTCTC 3 cut(s) 533, 664, 1539
BfaI CTAG 4 cut(s) 1367, 1584, 1770, 1934
BfmI CTRYAG 1 cut(s) 898
BfoI RGCGCY 2 cut(s) 591, 1025
BfrI CTTAAG 1 cut(s) 1891
BfuI GTATCC 1 cut(s) 1414
BisI GCNGC 6 cut(s) 463, 645, 1037, 1130, 1170, 2025
BlsI GCNGC 6 cut(s) 464, 646, 1038, 1131, 1171, 2026
BmcAI AGTACT 1 cut(s) 1765
Bme1390I CCNGG 6 cut(s) 106, 454, 518, 596, 938, 1779
Bme18I GGWCC 4 cut(s) 270, 457, 700, 1363
BmeT110I CYCGRG 2 cut(s) 10, 740
BmgBI CACGTC 1 cut(s) 445
BmgT120I GGNCC 7 cut(s) 19, 270, 381, 457, 700, 934, 1363
BmiI GGNNCC 8 cut(s) 152, 272, 383, 458, 589, 1083, 1568, 2012
BmrFI CCNGG 6 cut(s) 106, 454, 518, 596, 938, 1779
BmrI ACTGGG 1 cut(s) 1533
BmsI GCATC 3 cut(s) 1792, 1994, 2027
BmuI ACTGGG 1 cut(s) 1533
BpiI GAAGAC 1 cut(s) 1636
BpmI CTGGAG 2 cut(s) 740, 1865
Bpu10I CCTNAGC 2 cut(s) 203, 1803
BpuEI CTTGAG 4 cut(s) 905, 1034, 1181, 1199
BpuMI CCSGG 2 cut(s) 518, 596
Bsa29I ATCGAT 1 cut(s) 1437
BsaBI GATNNNNATC 2 cut(s) 1379, 2060
BsaHI GRCGYC 2 cut(s) 225, 588
BsaI GGTCTC 1 cut(s) 533
BsaJI CCNNGG 8 cut(s) 22, 46, 453, 648, 936, 1723, 1778, 2022
BsaWI WCCGGW 2 cut(s) 1417, 1521
BsaXI ACNNNNNCTCC 6 cut(s) 311, 341, 389, 419, 434, 464
Bsc4I CCNNNNNNNGG 6 cut(s) 16, 17, 255, 651, 1576, 1724
Bse118I RCCGGY 3 cut(s) 631, 931, 1521
Bse1I ACTGG 1 cut(s) 1539
Bse3DI GCAATG 2 cut(s) 1903, 1980
Bse8I GATNNNNATC 2 cut(s) 1379, 2060
BseAI TCCGGA 1 cut(s) 1417
BseBI CCWGG 4 cut(s) 106, 454, 938, 1779
BseCI ATCGAT 1 cut(s) 1437
BseDI CCNNGG 8 cut(s) 22, 46, 453, 648, 936, 1723, 1778, 2022
BseGI GGATG 4 cut(s) 198, 1985, 2018, 2029
BseJI GATNNNNATC 2 cut(s) 1379, 2060
BseLI CCNNNNNNNGG 6 cut(s) 16, 17, 255, 651, 1576, 1724
BseMI GCAATG 2 cut(s) 1903, 1980
BseMII CTCAG 6 cut(s) 109, 194, 592, 656, 1274, 1817
BseNI ACTGG 1 cut(s) 1539
BseRI GAGGAG 3 cut(s) 182, 467, 1579
BseXI GCAGC 4 cut(s) 449, 1048, 1116, 1181
Bsh1236I CGCG 7 cut(s) 339, 366, 485, 487, 613, 615, 2024
Bsh1285I CGRYCG 4 cut(s) 364, 430, 517, 2120
BshFI GGCC 5 cut(s) 21, 51, 382, 644, 935
BshNI GGYRCC 1 cut(s) 587
BshTI ACCGGT 1 cut(s) 1521
BshVI ATCGAT 1 cut(s) 1437
BsiEI CGRYCG 4 cut(s) 364, 430, 517, 2120
BsiHKAI GWGCWC 5 cut(s) 306, 495, 671, 756, 921
BsiHKCI CYCGRG 2 cut(s) 10, 740
BsiSI CCGG 7 cut(s) 379, 517, 595, 632, 932, 1418, 1522
BslFI GGGAC 1 cut(s) 256
BslI CCNNNNNNNGG 6 cut(s) 16, 17, 255, 651, 1576, 1724
BsmAI GTCTC 3 cut(s) 533, 664, 1539
BsmBI CGTCTC 1 cut(s) 664
BsmFI GGGAC 1 cut(s) 256
BsnI GGCC 5 cut(s) 21, 51, 382, 644, 935
Bso31I GGTCTC 1 cut(s) 533
BsoBI CYCGRG 2 cut(s) 10, 740
Bsp1286I GDGCHC 8 cut(s) 30, 306, 495, 657, 671, 756, 921, 1709
Bsp13I TCCGGA 1 cut(s) 1417
Bsp1407I TGTACA 1 cut(s) 1816
Bsp143I GATC 3 cut(s) 1081, 1153, 1901
Bsp19I CCATGG 1 cut(s) 648
BspANI GGCC 5 cut(s) 21, 51, 382, 644, 935
BspCNI CTCAG 6 cut(s) 108, 195, 591, 657, 1275, 1816
BspDI ATCGAT 1 cut(s) 1437
BspEI TCCGGA 1 cut(s) 1417
BspFNI CGCG 7 cut(s) 339, 366, 485, 487, 613, 615, 2024
BspLI GGNNCC 8 cut(s) 152, 272, 383, 458, 589, 1083, 1568, 2012
BspPI GGATC 3 cut(s) 1076, 1089, 1909
BspQI GCTCTTC 1 cut(s) 1714
BspT107I GGYRCC 1 cut(s) 587
BspTI CTTAAG 1 cut(s) 1891
BspTNI GGTCTC 1 cut(s) 533
BsrDI GCAATG 2 cut(s) 1903, 1980
BsrFI RCCGGY 3 cut(s) 631, 931, 1521
BsrGI TGTACA 1 cut(s) 1816
BsrI ACTGG 1 cut(s) 1539
BssAI RCCGGY 3 cut(s) 631, 931, 1521
BssECI CCNNGG 8 cut(s) 22, 46, 453, 648, 936, 1723, 1778, 2022
BssMI GATC 3 cut(s) 1081, 1153, 1901
BssNAI GTATAC 1 cut(s) 1143
BssNI GRCGYC 2 cut(s) 225, 588
BssT1I CCWWGG 3 cut(s) 22, 648, 1723
Bst1107I GTATAC 1 cut(s) 1143
Bst2UI CCWGG 4 cut(s) 106, 454, 938, 1779
Bst4CI ACNGT 4 cut(s) 764, 899, 912, 2121
Bst6I CTCTTC 5 cut(s) 407, 1236, 1714, 2077, 2084
BstACI GRCGYC 2 cut(s) 225, 588
BstAFI CTTAAG 1 cut(s) 1891
BstAUI TGTACA 1 cut(s) 1816
BstC8I GCNNGC 6 cut(s) 633, 637, 813, 933, 1020, 1651
BstDEI CTNAG 7 cut(s) 95, 203, 578, 665, 1283, 1803, 1991
BstDSI CCRYGG 2 cut(s) 648, 2022
BstF5I GGATG 4 cut(s) 198, 1985, 2018, 2029
BstFNI CGCG 7 cut(s) 339, 366, 485, 487, 613, 615, 2024
BstH2I RGCGCY 2 cut(s) 591, 1025
BstHHI GCGC 7 cut(s) 368, 467, 487, 590, 615, 931, 1024
BstKTI GATC 3 cut(s) 1084, 1156, 1904
BstMAI GTCTC 3 cut(s) 533, 664, 1539
BstMBI GATC 3 cut(s) 1081, 1153, 1901
BstMCI CGRYCG 4 cut(s) 364, 430, 517, 2120
BstMWI GCNNNNNNNGC 6 cut(s) 641, 808, 1015, 1045, 1493, 2024
BstNI CCWGG 4 cut(s) 106, 454, 938, 1779
BstNSI RCATGY 2 cut(s) 1276, 1968
BstSCI CCNGG 6 cut(s) 104, 452, 516, 594, 936, 1777
BstSFI CTRYAG 1 cut(s) 898
BstUI CGCG 7 cut(s) 339, 366, 485, 487, 613, 615, 2024
BstV1I GCAGC 4 cut(s) 449, 1048, 1116, 1181
BstV2I GAAGAC 1 cut(s) 1636
BstX2I RGATCY 1 cut(s) 1081
BstYI RGATCY 1 cut(s) 1081
BstZ17I GTATAC 1 cut(s) 1143
Bsu15I ATCGAT 1 cut(s) 1437
BsuI GTATCC 1 cut(s) 1414
BsuRI GGCC 5 cut(s) 21, 51, 382, 644, 935
BsuTUI ATCGAT 1 cut(s) 1437
BtgI CCRYGG 2 cut(s) 648, 2022
BtrI CACGTC 1 cut(s) 445
BtsCI GGATG 4 cut(s) 198, 1985, 2018, 2029
BtsI GCAGTG 1 cut(s) 1172
BtsIMutI CAGTG 2 cut(s) 1172, 1546
Cac8I GCNNGC 6 cut(s) 633, 637, 813, 933, 1020, 1651
CfoI GCGC 7 cut(s) 368, 467, 487, 590, 615, 931, 1024
Cfr10I RCCGGY 3 cut(s) 631, 931, 1521
Cfr13I GGNCC 7 cut(s) 19, 270, 381, 457, 700, 934, 1363
Cfr42I CCGCGG 1 cut(s) 2025
ClaI ATCGAT 1 cut(s) 1437
CseI GACGC 2 cut(s) 233, 604
Csp6I GTAC 5 cut(s) 523, 556, 1764, 1817, 1962
CspAI ACCGGT 1 cut(s) 1521
CspCI CAANNNNNGTGG 2 cut(s) 1037, 1072
CviAII CATG 7 cut(s) 640, 649, 1204, 1273, 1297, 1355, 1965
CviQI GTAC 5 cut(s) 523, 556, 1764, 1817, 1962
DdeI CTNAG 7 cut(s) 95, 203, 578, 665, 1283, 1803, 1991
DinI GGCGCC 1 cut(s) 589
DpnI GATC 3 cut(s) 1083, 1155, 1903
DpnII GATC 3 cut(s) 1081, 1153, 1901
DrdI GACNNNNNNGTC 1 cut(s) 455
DseDI GACNNNNNNGTC 1 cut(s) 455
EaeI YGGCCR 1 cut(s) 642
Eam1104I CTCTTC 5 cut(s) 407, 1236, 1714, 2077, 2084
EarI CTCTTC 5 cut(s) 407, 1236, 1714, 2077, 2084
Ecl136II GAGCTC 3 cut(s) 493, 669, 754
Eco130I CCWWGG 3 cut(s) 22, 648, 1723
Eco24I GRGCYC 6 cut(s) 30, 495, 657, 671, 756, 1709
Eco31I GGTCTC 1 cut(s) 533
Eco32I GATATC 3 cut(s) 723, 1851, 2058
Eco47I GGWCC 4 cut(s) 270, 457, 700, 1363
Eco53kI GAGCTC 3 cut(s) 493, 669, 754
Eco57I CTGAAG 2 cut(s) 824, 1260
Eco88I CYCGRG 2 cut(s) 10, 740
EcoICRI GAGCTC 3 cut(s) 493, 669, 754
EcoRII CCWGG 4 cut(s) 104, 452, 936, 1777
EcoRV GATATC 3 cut(s) 723, 1851, 2058
EcoT14I CCWWGG 3 cut(s) 22, 648, 1723
EcoT38I GRGCYC 6 cut(s) 30, 495, 657, 671, 756, 1709
EgeI GGCGCC 1 cut(s) 589
EheI GGCGCC 1 cut(s) 589
ErhI CCWWGG 3 cut(s) 22, 648, 1723
Esp3I CGTCTC 1 cut(s) 664
FaeI CATG 7 cut(s) 643, 652, 1207, 1276, 1300, 1358, 1968
FaqI GGGAC 1 cut(s) 256
FatI CATG 7 cut(s) 639, 648, 1203, 1272, 1296, 1354, 1964
FauI CCCGC 3 cut(s) 257, 281, 330
FblI GTMKAC 6 cut(s) 360, 396, 447, 618, 690, 1142
Fnu4HI GCNGC 6 cut(s) 463, 645, 1037, 1130, 1170, 2025
FokI GGATG 4 cut(s) 185, 1972, 2005, 2016
FriOI GRGCYC 6 cut(s) 30, 495, 657, 671, 756, 1709
Fsp4HI GCNGC 6 cut(s) 463, 645, 1037, 1130, 1170, 2025
FspBI CTAG 4 cut(s) 1367, 1584, 1770, 1934
GlaI GCGC 7 cut(s) 367, 466, 486, 589, 614, 930, 1023
GluI GCNGC 6 cut(s) 463, 645, 1037, 1130, 1170, 2025
GsuI CTGGAG 2 cut(s) 740, 1865
HaeII RGCGCY 2 cut(s) 591, 1025
HaeIII GGCC 5 cut(s) 21, 51, 382, 644, 935
HapII CCGG 7 cut(s) 379, 517, 595, 632, 932, 1418, 1522
HgaI GACGC 2 cut(s) 233, 604
HhaI GCGC 7 cut(s) 368, 467, 487, 590, 615, 931, 1024
Hin1I GRCGYC 2 cut(s) 225, 588
Hin1II CATG 7 cut(s) 643, 652, 1207, 1276, 1300, 1358, 1968
Hin6I GCGC 7 cut(s) 366, 465, 485, 588, 613, 929, 1022
HinP1I GCGC 7 cut(s) 366, 465, 485, 588, 613, 929, 1022
HincII GTYRAC 4 cut(s) 361, 397, 448, 619
HindII GTYRAC 4 cut(s) 361, 397, 448, 619
HindIII AAGCTT 2 cut(s) 886, 1064
HinfI GANTC 9 cut(s) 13, 449, 736, 833, 1266, 1598, 1641, 1928, 2108
HpaII CCGG 7 cut(s) 379, 517, 595, 632, 932, 1418, 1522
HphI GGTGA 3 cut(s) 616, 1412, 1896
Hpy166II GTNNAC 7 cut(s) 361, 397, 448, 619, 691, 1143, 1635
Hpy8I GTNNAC 7 cut(s) 361, 397, 448, 619, 691, 1143, 1635
HpyAV CCTTC 3 cut(s) 424, 553, 1822
HpyCH4III ACNGT 4 cut(s) 764, 899, 912, 2121
HpyCH4IV ACGT 2 cut(s) 444, 1574
HpyCH4V TGCA 7 cut(s) 64, 1048, 1693, 1749, 1876, 1985, 2018
HpyF10VI GCNNNNNNNGC 6 cut(s) 641, 808, 1015, 1045, 1493, 2024
HpyF3I CTNAG 7 cut(s) 95, 203, 578, 665, 1283, 1803, 1991
HpySE526I ACGT 2 cut(s) 444, 1574
Hsp92I GRCGYC 2 cut(s) 225, 588
Hsp92II CATG 7 cut(s) 643, 652, 1207, 1276, 1300, 1358, 1968
HspAI GCGC 7 cut(s) 366, 465, 485, 588, 613, 929, 1022
KasI GGCGCC 1 cut(s) 587
Kpn2I TCCGGA 1 cut(s) 1417
KroI GCCGGC 2 cut(s) 631, 931
KroNI GCCGGC 2 cut(s) 633, 933
KspI CCGCGG 1 cut(s) 2025
Kzo9I GATC 3 cut(s) 1081, 1153, 1901
LguI GCTCTTC 1 cut(s) 1714
LmnI GCTCC 8 cut(s) 480, 498, 751, 759, 973, 993, 1126, 1566
Lsp1109I GCAGC 4 cut(s) 449, 1048, 1116, 1181
LweI GCATC 3 cut(s) 1792, 1994, 2027
MaeI CTAG 4 cut(s) 1367, 1584, 1770, 1934
MaeII ACGT 2 cut(s) 444, 1574
MaeIII GTNAC 3 cut(s) 469, 1291, 1505
MalI GATC 3 cut(s) 1083, 1155, 1903
MboI GATC 3 cut(s) 1081, 1153, 1901
MflI RGATCY 1 cut(s) 1081
MhlI GDGCHC 8 cut(s) 30, 306, 495, 657, 671, 756, 921, 1709
Mly113I GGCGCC 1 cut(s) 588
MlyI GAGTC 4 cut(s) 22, 443, 1607, 1650
MmeI TCCRAC 1 cut(s) 1557
MroI TCCGGA 1 cut(s) 1417
MroNI GCCGGC 2 cut(s) 631, 931
MroXI GAANNNNTTC 1 cut(s) 71
MseI TTAA 5 cut(s) 1041, 1062, 1610, 1892, 1947
MslI CAYNNNNRTG 1 cut(s) 486
MspA1I CMGCKG 3 cut(s) 462, 1807, 2024
MspCI CTTAAG 1 cut(s) 1891
MspI CCGG 7 cut(s) 379, 517, 595, 632, 932, 1418, 1522
MspR9I CCNGG 6 cut(s) 106, 454, 518, 596, 938, 1779
MvaI CCWGG 4 cut(s) 106, 454, 938, 1779
MvnI CGCG 7 cut(s) 339, 366, 485, 487, 613, 615, 2024
MwoI GCNNNNNNNGC 6 cut(s) 641, 808, 1015, 1045, 1493, 2024
NaeI GCCGGC 2 cut(s) 633, 933
NarI GGCGCC 1 cut(s) 588
NciI CCSGG 2 cut(s) 518, 596
NcoI CCATGG 1 cut(s) 648
NdeII GATC 3 cut(s) 1081, 1153, 1901
NgoMIV GCCGGC 2 cut(s) 631, 931
NlaIII CATG 7 cut(s) 643, 652, 1207, 1276, 1300, 1358, 1968
NlaIV GGNNCC 8 cut(s) 152, 272, 383, 458, 589, 1083, 1568, 2012
NmeAIII GCCGAG 2 cut(s) 27, 376
NmuCI GTSAC 2 cut(s) 469, 1291
NspI RCATGY 2 cut(s) 1276, 1968
OliI CACNNNNGTG 1 cut(s) 486
PaeR7I CTCGAG 1 cut(s) 740
PciI ACATGT 1 cut(s) 1964
PciSI GCTCTTC 1 cut(s) 1714
PcsI WCGNNNNNNNCGW 5 cut(s) 177, 354, 441, 731, 2117
PdiI GCCGGC 2 cut(s) 633, 933
PdmI GAANNNNTTC 1 cut(s) 71
PfeI GAWTC 5 cut(s) 736, 833, 1266, 1928, 2108
PflFI GACNNNGTC 2 cut(s) 227, 686
PfoI TCCNGGA 1 cut(s) 104
PinAI ACCGGT 1 cut(s) 1521
PkrI GCNGC 6 cut(s) 464, 646, 1038, 1131, 1171, 2026
PleI GAGTC 4 cut(s) 21, 443, 1606, 1649
PluTI GGCGCC 1 cut(s) 591
PpsI GAGTC 4 cut(s) 21, 443, 1606, 1649
PscI ACATGT 1 cut(s) 1964
PshBI ATTAAT 1 cut(s) 1610
Psp124BI GAGCTC 3 cut(s) 495, 671, 756
Psp6I CCWGG 4 cut(s) 104, 452, 936, 1777
PspGI CCWGG 4 cut(s) 104, 452, 936, 1777
PspN4I GGNNCC 8 cut(s) 152, 272, 383, 458, 589, 1083, 1568, 2012
PspPI GGNCC 7 cut(s) 19, 270, 381, 457, 700, 934, 1363
PsrI GAACNNNNNNTAC 2 cut(s) 1126, 1158
PsuI RGATCY 1 cut(s) 1081
PsyI GACNNNGTC 2 cut(s) 227, 686
PvuII CAGCTG 1 cut(s) 1807
RsaI GTAC 5 cut(s) 524, 557, 1765, 1818, 1963
RsaNI GTAC 5 cut(s) 523, 556, 1764, 1817, 1962
RseI CAYNNNNRTG 1 cut(s) 486
SacI GAGCTC 3 cut(s) 495, 671, 756
SacII CCGCGG 1 cut(s) 2025
SalI GTCGAC 4 cut(s) 359, 395, 446, 617
SapI GCTCTTC 1 cut(s) 1714
SaqAI TTAA 5 cut(s) 1041, 1062, 1610, 1892, 1947
SatI GCNGC 6 cut(s) 463, 645, 1037, 1130, 1170, 2025
Sau3AI GATC 3 cut(s) 1081, 1153, 1901
Sau96I GGNCC 7 cut(s) 19, 270, 381, 457, 700, 934, 1363
ScaI AGTACT 1 cut(s) 1765
SchI GAGTC 4 cut(s) 22, 443, 1607, 1650
ScrFI CCNGG 6 cut(s) 106, 454, 518, 596, 938, 1779
SduI GDGCHC 8 cut(s) 30, 306, 495, 657, 671, 756, 921, 1709
SfaNI GCATC 3 cut(s) 1792, 1994, 2027
SfcI CTRYAG 1 cut(s) 898
SfoI GGCGCC 1 cut(s) 589
Sfr274I CTCGAG 1 cut(s) 740
Sfr303I CCGCGG 1 cut(s) 2025
SgrBI CCGCGG 1 cut(s) 2025
SinI GGWCC 4 cut(s) 270, 457, 700, 1363
SlaI CTCGAG 1 cut(s) 740
SmiMI CAYNNNNRTG 1 cut(s) 486
SmlI CTYRAG 6 cut(s) 740, 920, 1013, 1178, 1196, 1891
SmoI CTYRAG 6 cut(s) 740, 920, 1013, 1178, 1196, 1891
SspDI GGCGCC 1 cut(s) 587
SspI AATATT 2 cut(s) 1342, 1614
SspMI CTAG 4 cut(s) 1367, 1584, 1770, 1934
SstI GAGCTC 3 cut(s) 495, 671, 756
StyD4I CCNGG 6 cut(s) 104, 452, 516, 594, 936, 1777
StyI CCWWGG 3 cut(s) 22, 648, 1723
TaaI ACNGT 4 cut(s) 764, 899, 912, 2121
TaiI ACGT 2 cut(s) 447, 1577
TaqII GACCGA 1 cut(s) 548
TatI WGTACW 2 cut(s) 1763, 1816
TauI GCSGC 2 cut(s) 647, 2027
TfiI GAWTC 5 cut(s) 736, 833, 1266, 1928, 2108
Tru1I TTAA 5 cut(s) 1041, 1062, 1610, 1892, 1947
Tru9I TTAA 5 cut(s) 1041, 1062, 1610, 1892, 1947
TscAI CASTG 2 cut(s) 1179, 1546
TseFI GTSAC 2 cut(s) 469, 1291
TseI GCWGC 4 cut(s) 462, 1036, 1129, 1169
Tsp45I GTSAC 2 cut(s) 469, 1291
TspDTI ATGAA 9 cut(s) 406, 499, 797, 1313, 1442, 1517, 1548, 1701, 1965
TspGWI ACGGA 2 cut(s) 713, 2022
TspRI CASTG 2 cut(s) 1179, 1546
Tth111I GACNNNGTC 2 cut(s) 227, 686
Vha464I CTTAAG 1 cut(s) 1891
VpaK11BI GGWCC 4 cut(s) 270, 457, 700, 1363
VspI ATTAAT 1 cut(s) 1610
XapI RAATTY 4 cut(s) 290, 871, 1791, 1953
XbaI TCTAGA 1 cut(s) 1933
XceI RCATGY 2 cut(s) 1276, 1968
XcmI CCANNNNNNNNNTGG 1 cut(s) 121
XhoI CTCGAG 1 cut(s) 740
XmiI GTMKAC 6 cut(s) 360, 396, 447, 618, 690, 1142
XmnI GAANNNNTTC 1 cut(s) 71
XspI CTAG 4 cut(s) 1367, 1584, 1770, 1934
ZrmI AGTACT 1 cut(s) 1765
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.