MD09G1101800.v1.1

F-box LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
OG0000349
Physical Location & Seq
Reverse (-)
7461389 .. 7464000
2612 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1101800.v1.1.491

Sequence Viewer

Length: 1467 bp
ATGGCAGAAACATTTTACAAGAGAGGGGAGATGGAAGAAGAGGCAAGCAATCAAAACCGAAGCCTCAGCGATCTGCCGGAGGACCTCCTCCTCCGCATCCTCTCCTTCCTCCCCACATTAGACTCCGTCCAAACCTCCCTCATCTCCCAAAAATGGCGCCCTCTCTGGTCCCTCGTCCCCTCCCTCGATTTCAGATTCGAACTCTTCCCGCCGCGCGAGCCGCCGTCGGACACTTGCCAGTTCTACGCCGAGTTCGTCGACCGCGTTCTGATTTCCCGCCCCAATTCTCCCGTCCACACTTTCCGTCTCACTTTCATCTTCCACGATCACTACCACTCCCACGTCGACTCCTGGGTGCGATCCGCCGTCACCCACCTCCGCGCCCGGGAGCTCCACCTCGACTTCTTCATCCACAGAGATTTTCACAACGACGAAACCCATAATCACCATTACGATTTCCCTTTCTCTTTTCTGAGAAATGGGTGTGTTGAGAAATTGAGCCTCACGCGGTGTTATCTCACTCAGCCGGCGAAATTGTCCACCATGCGATTTTGGACGATTCGGTCCTTGCTTCTCGATATGGTTTGTTTGGAGGACCAGATGATGAATGATTTGATATTGGGTTGCCCTAATTTGGAAGATATGGAGCTTCAAAACTGTTGGGGACATCATCACTTGAAGATATGTAGCAAAAGGCTGAAGAGGCTGGCATTTGGGTTCTTCTATGATTCCGAAATCAAAGAGACTGTTTCGATTGATTGCCCAAATCTTTGTTCGATTAGCTTTGATTGCTGTAGCTTTTACAGGTTTGCCCTGAAGAATGCTGAGTCTCTGGTTTATTTTCGTGTCCAGATTGTGAACATAGTGGAACGTTACTATGACTTGTGGAGTAGGACGGTTAAGCTAATTGAGCAAGCGCCTAATCTTAAGCATCTCGATGCATTAAATTGGTGGTTTAAGTTTTTGACATCAACGGACTCATTCCCTAAAAGTTTTATACTCCACAATCTGAAGCTCTTAGAGCTACAAACAGGATTTACCAAGCATGATCTCGTTGGCATGGCTGCACTGCTTAAACATTGTCCCAATCTGGAGACAATGATTCTAGAATACCCTTTCAAGTTCGGGGAAGATGAGAGTTTACCAGAAGAGTTGTCGGATAAATCAGCTGAGTTTAGCATTCCAAGTCTCAAGCAAGTTACAATCAAACCGTATACAGGAACAGAAGATGAAGGTAATTTTGTGAAAATCTTGACTGAGCAAGGAGTTGTCCTGGAAAAGATTGTACTTGTTCCTGGCCAAGTTGGCGAGAACGGAATAGTTCTGATGCAGGTTCCCCCAATCGTTCTGTATAAAAAGGATTCACAAAGTTGGAAGTACTCTCTCCTCCGCAACGCCAGATGTACTCTGAGCTTTAAATTGGGAATCCATCGGCTCAGCCAGTTTCCGTGTTATTTCTTAGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

489

Amino Acids

57.15

Weight (kDa)

6.14

Isoelectric Point (pI)

45.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 22 - 60 1.8e-07 F-box domain
LRR_At1g61320_AtMIF1 PF23622 98 - 405 8.8e-23 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 116 - 259 3.9e-11 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000349)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G43415
fragaria_vesca FvH4_1g28610 FvH4_6g43940 FvH4_6g43940 FvH4_6g43940 FvH4_6g43950 FvH4_6g43960 FvH4_6g43970 FvH4_6g43990 FvH4_6g44000 FvH4_7g14510
malus_domestica MD09G1101800.v1.1 MD17G1089200.v1.1 MD17G1089300.v1.1 MD17G1089400.v1.1 MD17G1089500.v1.1 MD17G1089600.v1.1
prunus_persica Prupe.3G223900_v2.0.a1 Prupe.3G223900_v2.0.a1 Prupe.3G224000_v2.0.a1 Prupe.3G224100_v2.0.a1 Prupe.3G224200_v2.0.a1
pyrus_communis pycom09g02550 pycom17g02610 pycom17g08610 pycom17g08620 pycom17g08630 pycom17g08640 pycom17g08670
rosa_chinensis RchiOBHm_Chr2g0160711 RchiOBHm_Chr2g0160721 RchiOBHm_Chr2g0160731 RchiOBHm_Chr2g0160741 RchiOBHm_Chr4g0433831 RchiOBHm_Chr7g0197991
rosa_laevigata RLG00000001614 RLG00000002340 RLG00000003895 RLG00000005223 RLG00000021235 RLG00000021236 RLG00000021237 RLG00000021238 RLG00000028664 RLG00000029542 RLG00000029654 RLG00000035034
rosa_multiflora Rmu_co8177938.1_g000001 Rmu_co8474907.1_g000002 Rmu_sc0000064.1_g000011 Rmu_sc0000221.1_g000038 Rmu_sc0002773.1_g000001 Rmu_sc0002773.1_g000004 Rmu_sc0002773.1_g000006 Rmu_sc0002773.1_g000008 Rmu_sc0003465.1_g000005 Rmu_sc0006325.1_g000010 Rmu_sc0024525.1_g000002 Rmu_sc0030848.1_g000001 Rmu_sc0030848.1_g000002 Rmu_sc0030848.1_g000004
rosa_roxburghii Rroxscaffold_2G00089410 Rroxscaffold_2G00089420 Rroxscaffold_2G00089430 Rroxscaffold_2G00089450 Rroxscaffold_2G00089460 Rroxscaffold_3G00258030 Rroxscaffold_5G00351500
rosa_rugosa Rorug02G0485200 Rorug02G0485400 Rorug02G0485500 Rorug02G0485600 Rorug06G0149200
rosa_samantha Rh1AG011000 Rh2AG501800 Rh2AG550200 Rh2AG550300 Rh2AG550400 Rh2AG550500 Rh2BG217000 Rh2BG564800 Rh2BG564900 Rh2BG565000 Rh2BG565100 Rh2BG607100 Rh2CG487700 Rh2CG534600 Rh2CG534700 Rh2CG534800 Rh2CG534900 Rh2DG573500 Rh2DG573600 Rh2DG574000 Rh2DG574100 Rh3CG290600 Rh7AG168600 Rh7BG171600 Rh7BG171700 Rh7CG178100 Rh7DG170700 Rh7DG170900
rosa_wichuraiana Rw2G022070 Rw2G045590 Rw2G045600 Rw2G045610 Rw2G045620 Rw3G021600 Rw7G014730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 562
Acc36I ACCTGC 1 cut(s) 1321
AccB1I GGYRCC 1 cut(s) 156
AccI GTMKAC 3 cut(s) 258, 345, 1214
AccII CGCG 5 cut(s) 214, 216, 264, 381, 508
AclI AACGTT 1 cut(s) 871
AclWI GGATC 1 cut(s) 354
AcoI YGGCCR 1 cut(s) 1297
AcuI CTGAAG 3 cut(s) 719, 836, 1031
AcyI GRCGYC 1 cut(s) 157
AdeI CACNNNGTG 1 cut(s) 510
AfaI GTAC 3 cut(s) 1287, 1379, 1405
AfiI CCNNNNNNNGG 4 cut(s) 153, 385, 634, 1217
AflII CTTAAG 1 cut(s) 926
AgsI TTSAA 3 cut(s) 653, 679, 1120
AjiI CACGTC 1 cut(s) 343
AjnI CCWGG 3 cut(s) 350, 1272, 1294
AjuI GAANNNNNNNTTGG 2 cut(s) 757, 789
AluBI AGCT 9 cut(s) 391, 649, 783, 798, 904, 1015, 1024, 1169, 1413
AluI AGCT 9 cut(s) 391, 649, 783, 798, 904, 1015, 1024, 1169, 1413
Alw21I GWGCWC 1 cut(s) 393
Alw26I GTCTC 5 cut(s) 311, 737, 834, 1088, 1193
AlwI GGATC 1 cut(s) 354
Ama87I CYCGRG 1 cut(s) 384
AoxI GGCC 1 cut(s) 1297
ApeKI GCWGC 1 cut(s) 1064
AspLEI GCGC 4 cut(s) 159, 216, 383, 919
AspS9I GGNCC 4 cut(s) 82, 168, 564, 595
AsuC2I CCSGG 2 cut(s) 385, 386
AsuHPI GGTGA 2 cut(s) 361, 437
AsuII TTCGAA 1 cut(s) 198
AvaI CYCGRG 1 cut(s) 384
AvaII GGWCC 4 cut(s) 82, 168, 564, 595
BalI TGGCCA 1 cut(s) 1299
BanI GGYRCC 1 cut(s) 156
BanII GRGCYC 1 cut(s) 393
Bbv12I GWGCWC 1 cut(s) 393
BbvCI CCTCAGC 1 cut(s) 65
BbvI GCAGC 1 cut(s) 1051
BccI CCATC 2 cut(s) 25, 1437
BceAI ACGGC 2 cut(s) 208, 350
BciT130I CCWGG 3 cut(s) 352, 1274, 1296
BcnI CCSGG 2 cut(s) 385, 386
BcoDI GTCTC 5 cut(s) 311, 737, 834, 1088, 1193
BfaI CTAG 1 cut(s) 1106
BfmI CTRYAG 1 cut(s) 793
BfoI RGCGCY 2 cut(s) 160, 920
BfrI CTTAAG 1 cut(s) 926
BfuAI ACCTGC 1 cut(s) 1321
BglI GCCNNNNNGGC 1 cut(s) 1305
BisI GCNGC 3 cut(s) 212, 221, 1065
BlpI GCTNAGC 1 cut(s) 1436
BlsI GCNGC 3 cut(s) 213, 222, 1066
BmcAI AGTACT 1 cut(s) 1379
Bme1390I CCNGG 5 cut(s) 352, 385, 386, 1274, 1296
Bme18I GGWCC 4 cut(s) 82, 168, 564, 595
BmeT110I CYCGRG 1 cut(s) 384
BmgBI CACGTC 1 cut(s) 343
BmgT120I GGNCC 4 cut(s) 82, 168, 564, 595
BmiI GGNNCC 3 cut(s) 158, 170, 1335
BmrFI CCNGG 5 cut(s) 352, 385, 386, 1274, 1296
BmsI GCATC 4 cut(s) 105, 928, 940, 1317
BpmI CTGGAG 1 cut(s) 1112
Bpu10I CCTNAGC 1 cut(s) 65
Bpu1102I GCTNAGC 1 cut(s) 1436
Bpu14I TTCGAA 1 cut(s) 198
BpuEI CTTGAG 1 cut(s) 1175
BpuMI CCSGG 2 cut(s) 385, 386
BsaHI GRCGYC 1 cut(s) 157
BsaJI CCNNGG 2 cut(s) 351, 384
BsaXI ACNNNNNCTCC 4 cut(s) 320, 332, 350, 362
Bsc4I CCNNNNNNNGG 4 cut(s) 153, 385, 634, 1217
Bse118I RCCGGY 1 cut(s) 526
Bse1I ACTGG 2 cut(s) 238, 1441
BseBI CCWGG 3 cut(s) 352, 1274, 1296
BseDI CCNNGG 2 cut(s) 351, 384
BseGI GGATG 2 cut(s) 96, 408
BseLI CCNNNNNNNGG 4 cut(s) 153, 385, 634, 1217
BseMII CTCAG 8 cut(s) 79, 464, 536, 816, 1161, 1248, 1400, 1450
BseNI ACTGG 2 cut(s) 238, 1441
BseRI GAGGAG 3 cut(s) 77, 80, 1376
BseXI GCAGC 1 cut(s) 1051
BsgI GTGCAG 1 cut(s) 1050
Bsh1236I CGCG 5 cut(s) 214, 216, 264, 381, 508
Bsh1285I CGRYCG 1 cut(s) 262
BshFI GGCC 1 cut(s) 1299
BshNI GGYRCC 1 cut(s) 156
BsiEI CGRYCG 1 cut(s) 262
BsiHKAI GWGCWC 1 cut(s) 393
BsiHKCI CYCGRG 1 cut(s) 384
BsiSI CCGG 3 cut(s) 77, 385, 527
BslFI GGGAC 4 cut(s) 154, 161, 678, 1068
BslI CCNNNNNNNGG 4 cut(s) 153, 385, 634, 1217
BsmAI GTCTC 5 cut(s) 311, 737, 834, 1088, 1193
BsmBI CGTCTC 1 cut(s) 311
BsmFI GGGAC 4 cut(s) 154, 161, 678, 1068
BsmI GAATGC 2 cut(s) 826, 1179
BsnI GGCC 1 cut(s) 1299
BsoBI CYCGRG 1 cut(s) 384
Bsp119I TTCGAA 1 cut(s) 198
Bsp1286I GDGCHC 1 cut(s) 393
Bsp143I GATC 4 cut(s) 70, 325, 359, 1048
Bsp1720I GCTNAGC 1 cut(s) 1436
BspANI GGCC 1 cut(s) 1299
BspCNI CTCAG 8 cut(s) 78, 465, 535, 817, 1162, 1249, 1401, 1449
BspFNI CGCG 5 cut(s) 214, 216, 264, 381, 508
BspLI GGNNCC 3 cut(s) 158, 170, 1335
BspMI ACCTGC 1 cut(s) 1321
BspPI GGATC 1 cut(s) 354
BspT104I TTCGAA 1 cut(s) 198
BspT107I GGYRCC 1 cut(s) 156
BspTI CTTAAG 1 cut(s) 926
BsrFI RCCGGY 1 cut(s) 526
BsrI ACTGG 2 cut(s) 238, 1441
BssAI RCCGGY 1 cut(s) 526
BssECI CCNNGG 2 cut(s) 351, 384
BssMI GATC 4 cut(s) 70, 325, 359, 1048
BssNAI GTATAC 1 cut(s) 1215
BssNI GRCGYC 1 cut(s) 157
Bst1107I GTATAC 1 cut(s) 1215
Bst2UI CCWGG 3 cut(s) 352, 1274, 1296
Bst4CI ACNGT 4 cut(s) 659, 748, 898, 1212
Bst6I CTCTTC 4 cut(s) 33, 209, 695, 1143
BstACI GRCGYC 1 cut(s) 157
BstAFI CTTAAG 1 cut(s) 926
BstBI TTCGAA 1 cut(s) 198
BstC8I GCNNGC 5 cut(s) 46, 218, 528, 708, 915
BstF5I GGATG 2 cut(s) 96, 408
BstFNI CGCG 5 cut(s) 214, 216, 264, 381, 508
BstH2I RGCGCY 2 cut(s) 160, 920
BstHHI GCGC 4 cut(s) 159, 216, 383, 919
BstKTI GATC 4 cut(s) 73, 328, 362, 1051
BstMAI GTCTC 5 cut(s) 311, 737, 834, 1088, 1193
BstMBI GATC 4 cut(s) 70, 325, 359, 1048
BstMCI CGRYCG 1 cut(s) 262
BstMWI GCNNNNNNNGC 7 cut(s) 217, 220, 703, 789, 910, 1021, 1305
BstNI CCWGG 3 cut(s) 352, 1274, 1296
BstSCI CCNGG 5 cut(s) 350, 383, 384, 1272, 1294
BstSFI CTRYAG 1 cut(s) 793
BstUI CGCG 5 cut(s) 214, 216, 264, 381, 508
BstV1I GCAGC 1 cut(s) 1051
BstZ17I GTATAC 1 cut(s) 1215
BsuRI GGCC 1 cut(s) 1299
BtrI CACGTC 1 cut(s) 343
BtsCI GGATG 2 cut(s) 96, 408
BtsI GCAGTG 1 cut(s) 1067
BtsIMutI CAGTG 1 cut(s) 1067
BveI ACCTGC 1 cut(s) 1321
Cac8I GCNNGC 5 cut(s) 46, 218, 528, 708, 915
CfoI GCGC 4 cut(s) 159, 216, 383, 919
Cfr10I RCCGGY 1 cut(s) 526
Cfr13I GGNCC 4 cut(s) 82, 168, 564, 595
Cfr9I CCCGGG 1 cut(s) 384
Csp6I GTAC 3 cut(s) 1286, 1378, 1404
CviAII CATG 3 cut(s) 544, 1046, 1060
CviQI GTAC 3 cut(s) 1286, 1378, 1404
DinI GGCGCC 1 cut(s) 158
DpnI GATC 4 cut(s) 72, 327, 361, 1050
DpnII GATC 4 cut(s) 70, 325, 359, 1048
DraI TTTAAA 1 cut(s) 1417
DraIII CACNNNGTG 1 cut(s) 510
DrdI GACNNNNNNGTC 1 cut(s) 562
DseDI GACNNNNNNGTC 1 cut(s) 562
EaeI YGGCCR 1 cut(s) 1297
Eam1104I CTCTTC 4 cut(s) 33, 209, 695, 1143
EarI CTCTTC 4 cut(s) 33, 209, 695, 1143
EciI GGCGGA 1 cut(s) 352
Ecl136II GAGCTC 1 cut(s) 391
Eco24I GRGCYC 1 cut(s) 393
Eco47I GGWCC 4 cut(s) 82, 168, 564, 595
Eco53kI GAGCTC 1 cut(s) 391
Eco57I CTGAAG 3 cut(s) 719, 836, 1031
Eco88I CYCGRG 1 cut(s) 384
EcoICRI GAGCTC 1 cut(s) 391
EcoO109I RGGNCCY 1 cut(s) 82
EcoRII CCWGG 3 cut(s) 350, 1272, 1294
EcoT22I ATGCAT 1 cut(s) 943
EcoT38I GRGCYC 1 cut(s) 393
EgeI GGCGCC 1 cut(s) 158
EheI GGCGCC 1 cut(s) 158
Esp3I CGTCTC 1 cut(s) 311
FaeI CATG 3 cut(s) 547, 1049, 1063
FaqI GGGAC 4 cut(s) 154, 161, 678, 1068
FatI CATG 3 cut(s) 543, 1045, 1059
FauI CCCGC 2 cut(s) 216, 284
FblI GTMKAC 3 cut(s) 258, 345, 1214
Fnu4HI GCNGC 3 cut(s) 212, 221, 1065
FokI GGATG 2 cut(s) 83, 395
FriOI GRGCYC 1 cut(s) 393
Fsp4HI GCNGC 3 cut(s) 212, 221, 1065
FspBI CTAG 1 cut(s) 1106
GlaI GCGC 4 cut(s) 158, 215, 382, 918
GluI GCNGC 3 cut(s) 212, 221, 1065
GsuI CTGGAG 1 cut(s) 1112
HaeII RGCGCY 2 cut(s) 160, 920
HaeIII GGCC 1 cut(s) 1299
HapII CCGG 3 cut(s) 77, 385, 527
HhaI GCGC 4 cut(s) 159, 216, 383, 919
Hin1I GRCGYC 1 cut(s) 157
Hin1II CATG 3 cut(s) 547, 1049, 1063
Hin6I GCGC 4 cut(s) 157, 214, 381, 917
HinP1I GCGC 4 cut(s) 157, 214, 381, 917
HincII GTYRAC 2 cut(s) 259, 346
HindII GTYRAC 2 cut(s) 259, 346
HpaII CCGG 3 cut(s) 77, 385, 527
HphI GGTGA 2 cut(s) 361, 437
Hpy166II GTNNAC 7 cut(s) 259, 295, 346, 540, 859, 1142, 1215
Hpy188I TCNGA 9 cut(s) 194, 229, 270, 474, 733, 1011, 1159, 1326, 1410
Hpy188III TCNNGA 6 cut(s) 575, 850, 935, 1091, 1106, 1252
Hpy8I GTNNAC 7 cut(s) 259, 295, 346, 540, 859, 1142, 1215
Hpy99I CGWCG 4 cut(s) 229, 260, 347, 434
HpyAV CCTTC 2 cut(s) 115, 1226
HpyCH4III ACNGT 4 cut(s) 659, 748, 898, 1212
HpyCH4IV ACGT 2 cut(s) 342, 871
HpyCH4V TGCA 3 cut(s) 941, 1067, 1330
HpyF10VI GCNNNNNNNGC 7 cut(s) 217, 220, 703, 789, 910, 1021, 1305
HpySE526I ACGT 2 cut(s) 342, 871
Hsp92I GRCGYC 1 cut(s) 157
Hsp92II CATG 3 cut(s) 547, 1049, 1063
HspAI GCGC 4 cut(s) 157, 214, 381, 917
KasI GGCGCC 1 cut(s) 156
KroI GCCGGC 1 cut(s) 526
KroNI GCCGGC 1 cut(s) 528
Kzo9I GATC 4 cut(s) 70, 325, 359, 1048
LmnI GCTCC 3 cut(s) 388, 396, 646
Lsp1109I GCAGC 1 cut(s) 1051
LweI GCATC 4 cut(s) 105, 928, 940, 1317
MaeI CTAG 1 cut(s) 1106
MaeII ACGT 2 cut(s) 342, 871
MaeIII GTNAC 3 cut(s) 367, 872, 1198
MalI GATC 4 cut(s) 72, 327, 361, 1050
MboI GATC 4 cut(s) 70, 325, 359, 1048
MhlI GDGCHC 1 cut(s) 393
MlsI TGGCCA 1 cut(s) 1299
MluCI AATT 8 cut(s) 283, 494, 533, 631, 906, 946, 1237, 1418
MluNI TGGCCA 1 cut(s) 1299
Mly113I GGCGCC 1 cut(s) 157
MlyI GAGTC 4 cut(s) 116, 341, 836, 971
MmeI TCCRAC 3 cut(s) 207, 1137, 1352
Mox20I TGGCCA 1 cut(s) 1299
Mph1103I ATGCAT 1 cut(s) 943
MroNI GCCGGC 1 cut(s) 526
MscI TGGCCA 1 cut(s) 1299
MseI TTAA 6 cut(s) 900, 927, 944, 957, 1074, 1416
MslI CAYNNNNRTG 1 cut(s) 936
Msp20I TGGCCA 1 cut(s) 1299
MspA1I CMGCKG 1 cut(s) 1169
MspCI CTTAAG 1 cut(s) 926
MspI CCGG 3 cut(s) 77, 385, 527
MspR9I CCNGG 5 cut(s) 352, 385, 386, 1274, 1296
Mva1269I GAATGC 2 cut(s) 826, 1179
MvaI CCWGG 3 cut(s) 352, 1274, 1296
MvnI CGCG 5 cut(s) 214, 216, 264, 381, 508
MwoI GCNNNNNNNGC 7 cut(s) 217, 220, 703, 789, 910, 1021, 1305
NaeI GCCGGC 1 cut(s) 528
NarI GGCGCC 1 cut(s) 157
NciI CCSGG 2 cut(s) 385, 386
NdeII GATC 4 cut(s) 70, 325, 359, 1048
NgoMIV GCCGGC 1 cut(s) 526
NlaIII CATG 3 cut(s) 547, 1049, 1063
NlaIV GGNNCC 3 cut(s) 158, 170, 1335
NmeAIII GCCGAG 1 cut(s) 274
NmuCI GTSAC 1 cut(s) 367
NsiI ATGCAT 1 cut(s) 943
NspV TTCGAA 1 cut(s) 198
PcsI WCGNNNNNNNCGW 2 cut(s) 252, 261
PctI GAATGC 2 cut(s) 826, 1179
PdiI GCCGGC 1 cut(s) 528
PfeI GAWTC 6 cut(s) 195, 559, 728, 1102, 1361, 1425
PflFI GACNNNGTC 1 cut(s) 125
PfoI TCCNGGA 1 cut(s) 1272
PkrI GCNGC 3 cut(s) 213, 222, 1066
PleI GAGTC 4 cut(s) 116, 341, 835, 971
PluTI GGCGCC 1 cut(s) 160
PpsI GAGTC 4 cut(s) 116, 341, 835, 971
PpuMI RGGWCCY 1 cut(s) 82
Psp124BI GAGCTC 1 cut(s) 393
Psp1406I AACGTT 1 cut(s) 871
Psp5II RGGWCCY 1 cut(s) 82
Psp6I CCWGG 3 cut(s) 350, 1272, 1294
PspGI CCWGG 3 cut(s) 350, 1272, 1294
PspN4I GGNNCC 3 cut(s) 158, 170, 1335
PspPI GGNCC 4 cut(s) 82, 168, 564, 595
PspPPI RGGWCCY 1 cut(s) 82
PsyI GACNNNGTC 1 cut(s) 125
PvuII CAGCTG 1 cut(s) 1169
RsaI GTAC 3 cut(s) 1287, 1379, 1405
RsaNI GTAC 3 cut(s) 1286, 1378, 1404
RseI CAYNNNNRTG 1 cut(s) 936
SacI GAGCTC 1 cut(s) 393
SalI GTCGAC 2 cut(s) 257, 344
SaqAI TTAA 6 cut(s) 900, 927, 944, 957, 1074, 1416
SatI GCNGC 3 cut(s) 212, 221, 1065
Sau3AI GATC 4 cut(s) 70, 325, 359, 1048
Sau96I GGNCC 4 cut(s) 82, 168, 564, 595
ScaI AGTACT 1 cut(s) 1379
SchI GAGTC 4 cut(s) 116, 341, 836, 971
ScrFI CCNGG 5 cut(s) 352, 385, 386, 1274, 1296
SduI GDGCHC 1 cut(s) 393
SfaNI GCATC 4 cut(s) 105, 928, 940, 1317
SfcI CTRYAG 1 cut(s) 793
SfoI GGCGCC 1 cut(s) 158
SfuI TTCGAA 1 cut(s) 198
SinI GGWCC 4 cut(s) 82, 168, 564, 595
SmaI CCCGGG 1 cut(s) 386
SmiMI CAYNNNNRTG 1 cut(s) 936
SmlI CTYRAG 2 cut(s) 926, 1190
SmoI CTYRAG 2 cut(s) 926, 1190
Sse9I AATT 8 cut(s) 283, 494, 533, 631, 906, 946, 1237, 1418
SspDI GGCGCC 1 cut(s) 156
SspMI CTAG 1 cut(s) 1106
SstI GAGCTC 1 cut(s) 393
StyD4I CCNGG 5 cut(s) 350, 383, 384, 1272, 1294
TaaI ACNGT 4 cut(s) 659, 748, 898, 1212
TaiI ACGT 2 cut(s) 345, 874
TaqI TCGA 9 cut(s) 186, 198, 258, 345, 399, 576, 752, 776, 936
TaqII GACCGA 1 cut(s) 552
TasI AATT 8 cut(s) 283, 494, 533, 631, 906, 946, 1237, 1418
TatI WGTACW 3 cut(s) 1285, 1377, 1403
TauI GCSGC 2 cut(s) 214, 223
TfiI GAWTC 6 cut(s) 195, 559, 728, 1102, 1361, 1425
Tru1I TTAA 6 cut(s) 900, 927, 944, 957, 1074, 1416
Tru9I TTAA 6 cut(s) 900, 927, 944, 957, 1074, 1416
TscAI CASTG 1 cut(s) 1074
TseFI GTSAC 1 cut(s) 367
TseI GCWGC 1 cut(s) 1064
Tsp45I GTSAC 1 cut(s) 367
TspDTI ATGAA 4 cut(s) 304, 397, 620, 1245
TspGWI ACGGA 5 cut(s) 115, 293, 989, 1329, 1437
TspMI CCCGGG 1 cut(s) 384
TspRI CASTG 1 cut(s) 1074
Tth111I GACNNNGTC 1 cut(s) 125
Vha464I CTTAAG 1 cut(s) 926
VpaK11BI GGWCC 4 cut(s) 82, 168, 564, 595
XbaI TCTAGA 1 cut(s) 1105
XmaI CCCGGG 1 cut(s) 384
XmiI GTMKAC 3 cut(s) 258, 345, 1214
XspI CTAG 1 cut(s) 1106
ZrmI AGTACT 1 cut(s) 1379
Zsp2I ATGCAT 1 cut(s) 943
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.