Rh2DG574100

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0000349
Physical Location & Seq
Forward (+)
80346257 .. 80349139
2883 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG574100.1

Sequence Viewer

Length: 1329 bp
ATGGAAGCGATGACGATGACTAATCGGAACCCTAATCGAAGCCTAAACGACCTCCCCGACGAAATCCTCCTCCACATCCTGAGCTTCTTCCCGACCCTCGACGCCGTCCAGACCTCCCTAATCTCCAGCAAATGGCGACCCCTCTGGTCCCGCCTTCGCTTCCTCAAATTCTCCTACGAGCACTTCCCCCTAAACGACCCGCCGTCCGATAACCGCGACTTCTTCGCCGAGTTCGTCGACCGCGCCCTCATTCTCCGGCCCCACTCCCCCATCGACCTCTTCTCCCTCTCCTTCATCTACCACGACCGCTTCGGCTTCCACGTCGACTCCTGGGTCCGCTGCGCCGTCACGCTCCTCCACGCGCGTGAGCTCCACCTCGACTTCTTCATCGACCGGGAGTACCACCAGACCGACGAGACCTTCAACCACAAGTACGATTTCCCTTTCGCCGTCCTCAGAAATGGCGCCGTCCAAGTGTTGAAGCTCACGCGCGTCGACCTCACCTTGCCGGCGAGCATGGCCGCCATGGGGCTCGTCTCTCTGAGCTCAATGTATCTCGACGAGGTCTATTTGACGGACCAGATGGTGTGTGATTTGATATCGGGTTGTCCGAATCTCGAGGAATTGGAGCTTCAGAACTGTTGGGGGATGGAGAAGATGAAGATATGTAGCAAAAAGCTGAAGAAGCTGGCGTTTGCTTATATTTATGATTCGGATAACAGGAACACGATTGAGATTGATTGCCCGAATTTGTGTTCGATAAGCTTTGATAACTGTAGTTTTACACAGTTTGTGCTCAAGTTTGCGCCGGCCCTGGTTGAGTTTAGTGTCAGCATTGTGAGGATAATGGAGCAGGACTATGGTTTGTGGAGCAGGATTGTGAGGCTACTTGAGCAAGCGCCTTATGTGAAGCAGCTTAATTTGCAAAATTGGTGGTTTAAGCTTCTTACATCAAAGGATCCTTTCTCCAAAAGTTTTATGCTTCACAACCTCAACCACTTGGAGCTGCGAACAGGGTATACCCAATGTGATCTGATTGGCTTGGCAGCACTGCTTGAGCTTTCTCCCAATCTCAAGAACATGACTTTAGATTATGTGGAAGATGGTATTTTACCTGAAGAGTTCTCAAATAAACCAGATGGATTCCACATGCCAAGTCTGAGGCAAGTGACCATGAAATCATATTCTGGAACACCAGATGAGAATAATTTTGTGAATATTTTGAAAAAGCATGGGGTGGTCCTAGAAAAGATAGTAATCCATCACATCAAAGTTGGTGAGAAATCATTTTCTCCGGTAGTTTTAAGTAAAATCCCTTGCAAAGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBD KIX_2

Protein Analysis

442

Amino Acids

51.2

Weight (kDa)

6.02

Isoelectric Point (pI)

37.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 15 - 56 1.6e-08 F-box domain
F-box-like PF12937 15 - 46 8.3e-06 F-box-like
LRR_At1g61320_AtMIF1 PF23622 84 - 372 1.2e-24 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 141 - 254 1.1e-09 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000349)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G43415
fragaria_vesca FvH4_1g28610 FvH4_6g43940 FvH4_6g43940 FvH4_6g43940 FvH4_6g43950 FvH4_6g43960 FvH4_6g43970 FvH4_6g43990 FvH4_6g44000 FvH4_7g14510
malus_domestica MD09G1101800.v1.1 MD17G1089200.v1.1 MD17G1089300.v1.1 MD17G1089400.v1.1 MD17G1089500.v1.1 MD17G1089600.v1.1
prunus_persica Prupe.3G223900_v2.0.a1 Prupe.3G223900_v2.0.a1 Prupe.3G224000_v2.0.a1 Prupe.3G224100_v2.0.a1 Prupe.3G224200_v2.0.a1
pyrus_communis pycom09g02550 pycom17g02610 pycom17g08610 pycom17g08620 pycom17g08630 pycom17g08640 pycom17g08670
rosa_chinensis RchiOBHm_Chr2g0160711 RchiOBHm_Chr2g0160721 RchiOBHm_Chr2g0160731 RchiOBHm_Chr2g0160741 RchiOBHm_Chr4g0433831 RchiOBHm_Chr7g0197991
rosa_laevigata RLG00000001614 RLG00000002340 RLG00000003895 RLG00000005223 RLG00000021235 RLG00000021236 RLG00000021237 RLG00000021238 RLG00000028664 RLG00000029542 RLG00000029654 RLG00000035034
rosa_multiflora Rmu_co8177938.1_g000001 Rmu_co8474907.1_g000002 Rmu_sc0000064.1_g000011 Rmu_sc0000221.1_g000038 Rmu_sc0002773.1_g000001 Rmu_sc0002773.1_g000004 Rmu_sc0002773.1_g000006 Rmu_sc0002773.1_g000008 Rmu_sc0003465.1_g000005 Rmu_sc0006325.1_g000010 Rmu_sc0024525.1_g000002 Rmu_sc0030848.1_g000001 Rmu_sc0030848.1_g000002 Rmu_sc0030848.1_g000004
rosa_roxburghii Rroxscaffold_2G00089410 Rroxscaffold_2G00089420 Rroxscaffold_2G00089430 Rroxscaffold_2G00089450 Rroxscaffold_2G00089460 Rroxscaffold_3G00258030 Rroxscaffold_5G00351500
rosa_rugosa Rorug02G0485200 Rorug02G0485400 Rorug02G0485500 Rorug02G0485600 Rorug06G0149200
rosa_samantha Rh1AG011000 Rh2AG501800 Rh2AG550200 Rh2AG550300 Rh2AG550400 Rh2AG550500 Rh2BG217000 Rh2BG564800 Rh2BG564900 Rh2BG565000 Rh2BG565100 Rh2BG607100 Rh2CG487700 Rh2CG534600 Rh2CG534700 Rh2CG534800 Rh2CG534900 Rh2DG573500 Rh2DG573600 Rh2DG574000 Rh2DG574100 Rh3CG290600 Rh7AG168600 Rh7BG171600 Rh7BG171700 Rh7CG178100 Rh7DG170700 Rh7DG170900
rosa_wichuraiana Rw2G022070 Rw2G045590 Rw2G045600 Rw2G045610 Rw2G045620 Rw3G021600 Rw7G014730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 332
AccB1I GGYRCC 1 cut(s) 464
AccB7I CCANNNNNTGG 1 cut(s) 132
AccI GTMKAC 4 cut(s) 237, 324, 495, 1019
AccII CGCG 6 cut(s) 216, 243, 362, 364, 490, 492
AciI CCGC 7 cut(s) 151, 200, 214, 241, 307, 337, 522
AclWI GGATC 2 cut(s) 953, 966
AcoI YGGCCR 1 cut(s) 519
AcsI RAATTY 2 cut(s) 167, 748
AcuI CTGAAG 3 cut(s) 617, 701, 1137
AcyI GRCGYC 2 cut(s) 102, 465
AfaI GTAC 2 cut(s) 401, 434
AfiI CCNNNNNNNGG 2 cut(s) 132, 528
AgsI TTSAA 3 cut(s) 424, 481, 1225
AhdI GACNNNNNGTC 1 cut(s) 202
AjiI CACGTC 1 cut(s) 322
AjnI CCWGG 2 cut(s) 329, 813
AleI CACNNNNGTG 1 cut(s) 363
Alw21I GWGCWC 4 cut(s) 183, 372, 548, 798
Alw26I GTCTC 2 cut(s) 410, 541
AlwI GGATC 2 cut(s) 953, 966
Ama87I CYCGRG 1 cut(s) 617
AoxI GGCC 3 cut(s) 257, 519, 810
ApeKI GCWGC 4 cut(s) 339, 913, 1006, 1046
ApoI RAATTY 2 cut(s) 167, 748
AspLEI GCGC 7 cut(s) 245, 344, 364, 467, 492, 808, 901
AspS9I GGNCC 6 cut(s) 147, 258, 334, 577, 811, 1240
AsuC2I CCSGG 1 cut(s) 395
AsuHPI GGTGA 2 cut(s) 493, 1289
AvaI CYCGRG 1 cut(s) 617
AvaII GGWCC 4 cut(s) 147, 334, 577, 1240
BamHI GGATCC 1 cut(s) 958
BanI GGYRCC 1 cut(s) 464
BanII GRGCYC 3 cut(s) 372, 534, 548
Bbv12I GWGCWC 4 cut(s) 183, 372, 548, 798
BbvI GCAGC 4 cut(s) 326, 925, 993, 1058
BccI CCATC 6 cut(s) 278, 577, 643, 1097, 1133, 1269
BceAI ACGGC 5 cut(s) 89, 187, 329, 434, 452
BciT130I CCWGG 2 cut(s) 331, 815
BcnI CCSGG 1 cut(s) 395
BcoDI GTCTC 2 cut(s) 410, 541
BfaI CTAG 1 cut(s) 1244
BfmI CTRYAG 1 cut(s) 775
BfoI RGCGCY 2 cut(s) 468, 902
BisI GCNGC 5 cut(s) 340, 522, 914, 1007, 1047
BlsI GCNGC 5 cut(s) 341, 523, 915, 1008, 1048
Bme1390I CCNGG 3 cut(s) 331, 395, 815
Bme18I GGWCC 4 cut(s) 147, 334, 577, 1240
BmeRI GACNNNNNGTC 1 cut(s) 202
BmeT110I CYCGRG 1 cut(s) 617
BmgBI CACGTC 1 cut(s) 322
BmgT120I GGNCC 6 cut(s) 147, 258, 334, 577, 811, 1240
BmiI GGNNCC 6 cut(s) 29, 149, 260, 335, 466, 960
BmrFI CCNGG 3 cut(s) 331, 395, 815
BpmI CTGGAG 1 cut(s) 109
Bpu10I CCTNAGC 1 cut(s) 80
BpuEI CTTGAG 4 cut(s) 782, 911, 1058, 1076
BpuMI CCSGG 1 cut(s) 395
BsaBI GATNNNNATC 1 cut(s) 1256
BsaHI GRCGYC 2 cut(s) 102, 465
BsaI GGTCTC 1 cut(s) 410
BsaJI CCNNGG 3 cut(s) 330, 525, 813
BsaWI WCCGGW 1 cut(s) 1294
BsaXI ACNNNNNCTCC 4 cut(s) 266, 296, 311, 341
Bsc4I CCNNNNNNNGG 2 cut(s) 132, 528
Bse118I RCCGGY 2 cut(s) 508, 808
Bse8I GATNNNNATC 1 cut(s) 1256
BseBI CCWGG 2 cut(s) 331, 815
BseDI CCNNGG 3 cut(s) 330, 525, 813
BseGI GGATG 2 cut(s) 75, 654
BseJI GATNNNNATC 1 cut(s) 1256
BseLI CCNNNNNNNGG 2 cut(s) 132, 528
BseMII CTCAG 4 cut(s) 71, 469, 533, 1151
BseRI GAGGAG 2 cut(s) 59, 344
BseXI GCAGC 4 cut(s) 326, 925, 993, 1058
Bsh1236I CGCG 6 cut(s) 216, 243, 362, 364, 490, 492
Bsh1285I CGRYCG 3 cut(s) 241, 307, 394
BshFI GGCC 3 cut(s) 259, 521, 812
BshNI GGYRCC 1 cut(s) 464
BsiEI CGRYCG 3 cut(s) 241, 307, 394
BsiHKAI GWGCWC 4 cut(s) 183, 372, 548, 798
BsiHKCI CYCGRG 1 cut(s) 617
BsiSI CCGG 5 cut(s) 256, 394, 509, 809, 1295
BslFI GGGAC 1 cut(s) 133
BslI CCNNNNNNNGG 2 cut(s) 132, 528
BsmAI GTCTC 2 cut(s) 410, 541
BsmBI CGTCTC 1 cut(s) 541
BsmFI GGGAC 1 cut(s) 133
BsnI GGCC 3 cut(s) 259, 521, 812
Bso31I GGTCTC 1 cut(s) 410
BsoBI CYCGRG 1 cut(s) 617
Bsp1286I GDGCHC 5 cut(s) 183, 372, 534, 548, 798
Bsp143I GATC 2 cut(s) 958, 1030
Bsp19I CCATGG 1 cut(s) 525
BspACI CCGC 7 cut(s) 151, 200, 214, 241, 307, 337, 522
BspANI GGCC 3 cut(s) 259, 521, 812
BspCNI CTCAG 4 cut(s) 72, 468, 534, 1152
BspFNI CGCG 6 cut(s) 216, 243, 362, 364, 490, 492
BspLI GGNNCC 6 cut(s) 29, 149, 260, 335, 466, 960
BspPI GGATC 2 cut(s) 953, 966
BspT107I GGYRCC 1 cut(s) 464
BspTNI GGTCTC 1 cut(s) 410
BsrFI RCCGGY 2 cut(s) 508, 808
BssAI RCCGGY 2 cut(s) 508, 808
BssECI CCNNGG 3 cut(s) 330, 525, 813
BssMI GATC 2 cut(s) 958, 1030
BssNAI GTATAC 1 cut(s) 1020
BssNI GRCGYC 2 cut(s) 102, 465
BssT1I CCWWGG 1 cut(s) 525
Bst1107I GTATAC 1 cut(s) 1020
Bst2UI CCWGG 2 cut(s) 331, 815
Bst4CI ACNGT 3 cut(s) 641, 776, 789
Bst6I CTCTTC 2 cut(s) 284, 1113
BstACI GRCGYC 2 cut(s) 102, 465
BstC8I GCNNGC 5 cut(s) 510, 514, 690, 810, 897
BstDEI CTNAG 4 cut(s) 80, 455, 542, 1160
BstDSI CCRYGG 1 cut(s) 525
BstF5I GGATG 2 cut(s) 75, 654
BstFNI CGCG 6 cut(s) 216, 243, 362, 364, 490, 492
BstH2I RGCGCY 2 cut(s) 468, 902
BstHHI GCGC 7 cut(s) 245, 344, 364, 467, 492, 808, 901
BstKTI GATC 2 cut(s) 961, 1033
BstMAI GTCTC 2 cut(s) 410, 541
BstMBI GATC 2 cut(s) 958, 1030
BstMCI CGRYCG 3 cut(s) 241, 307, 394
BstMWI GCNNNNNNNGC 4 cut(s) 518, 685, 892, 922
BstNI CCWGG 2 cut(s) 331, 815
BstNSI RCATGY 1 cut(s) 1153
BstSCI CCNGG 3 cut(s) 329, 393, 813
BstSFI CTRYAG 1 cut(s) 775
BstUI CGCG 6 cut(s) 216, 243, 362, 364, 490, 492
BstV1I GCAGC 4 cut(s) 326, 925, 993, 1058
BstX2I RGATCY 1 cut(s) 958
BstYI RGATCY 1 cut(s) 958
BstZ17I GTATAC 1 cut(s) 1020
BsuRI GGCC 3 cut(s) 259, 521, 812
BtgI CCRYGG 1 cut(s) 525
BtgZI GCGATG 1 cut(s) 23
BtrI CACGTC 1 cut(s) 322
BtsCI GGATG 2 cut(s) 75, 654
BtsI GCAGTG 1 cut(s) 1049
BtsIMutI CAGTG 1 cut(s) 1049
Cac8I GCNNGC 5 cut(s) 510, 514, 690, 810, 897
CfoI GCGC 7 cut(s) 245, 344, 364, 467, 492, 808, 901
Cfr10I RCCGGY 2 cut(s) 508, 808
Cfr13I GGNCC 6 cut(s) 147, 258, 334, 577, 811, 1240
CseI GACGC 2 cut(s) 110, 481
Csp6I GTAC 2 cut(s) 400, 433
CspCI CAANNNNNGTGG 2 cut(s) 914, 949
CviAII CATG 6 cut(s) 517, 526, 1081, 1150, 1174, 1232
CviQI GTAC 2 cut(s) 400, 433
DdeI CTNAG 4 cut(s) 80, 455, 542, 1160
DinI GGCGCC 1 cut(s) 466
DpnI GATC 2 cut(s) 960, 1032
DpnII GATC 2 cut(s) 958, 1030
DrdI GACNNNNNNGTC 1 cut(s) 332
DriI GACNNNNNGTC 1 cut(s) 202
DseDI GACNNNNNNGTC 1 cut(s) 332
EaeI YGGCCR 1 cut(s) 519
Eam1104I CTCTTC 2 cut(s) 284, 1113
Eam1105I GACNNNNNGTC 1 cut(s) 202
EarI CTCTTC 2 cut(s) 284, 1113
Ecl136II GAGCTC 2 cut(s) 370, 546
Eco130I CCWWGG 1 cut(s) 525
Eco24I GRGCYC 3 cut(s) 372, 534, 548
Eco31I GGTCTC 1 cut(s) 410
Eco32I GATATC 1 cut(s) 600
Eco47I GGWCC 4 cut(s) 147, 334, 577, 1240
Eco53kI GAGCTC 2 cut(s) 370, 546
Eco57I CTGAAG 3 cut(s) 617, 701, 1137
Eco88I CYCGRG 1 cut(s) 617
EcoICRI GAGCTC 2 cut(s) 370, 546
EcoRII CCWGG 2 cut(s) 329, 813
EcoRV GATATC 1 cut(s) 600
EcoT14I CCWWGG 1 cut(s) 525
EcoT38I GRGCYC 3 cut(s) 372, 534, 548
EgeI GGCGCC 1 cut(s) 466
EheI GGCGCC 1 cut(s) 466
ErhI CCWWGG 1 cut(s) 525
Esp3I CGTCTC 1 cut(s) 541
FaeI CATG 6 cut(s) 520, 529, 1084, 1153, 1177, 1235
FaqI GGGAC 1 cut(s) 133
FatI CATG 6 cut(s) 516, 525, 1080, 1149, 1173, 1231
FauI CCCGC 2 cut(s) 158, 207
FblI GTMKAC 4 cut(s) 237, 324, 495, 1019
Fnu4HI GCNGC 5 cut(s) 340, 522, 914, 1007, 1047
FokI GGATG 2 cut(s) 62, 661
FriOI GRGCYC 3 cut(s) 372, 534, 548
Fsp4HI GCNGC 5 cut(s) 340, 522, 914, 1007, 1047
FspBI CTAG 1 cut(s) 1244
GlaI GCGC 7 cut(s) 244, 343, 363, 466, 491, 807, 900
GluI GCNGC 5 cut(s) 340, 522, 914, 1007, 1047
GsuI CTGGAG 1 cut(s) 109
HaeII RGCGCY 2 cut(s) 468, 902
HaeIII GGCC 3 cut(s) 259, 521, 812
HapII CCGG 5 cut(s) 256, 394, 509, 809, 1295
HgaI GACGC 2 cut(s) 110, 481
HhaI GCGC 7 cut(s) 245, 344, 364, 467, 492, 808, 901
Hin1I GRCGYC 2 cut(s) 102, 465
Hin1II CATG 6 cut(s) 520, 529, 1084, 1153, 1177, 1235
Hin6I GCGC 7 cut(s) 243, 342, 362, 465, 490, 806, 899
HinP1I GCGC 7 cut(s) 243, 342, 362, 465, 490, 806, 899
HincII GTYRAC 3 cut(s) 238, 325, 496
HindII GTYRAC 3 cut(s) 238, 325, 496
HindIII AAGCTT 2 cut(s) 763, 941
HinfI GANTC 4 cut(s) 326, 613, 710, 1143
HpaII CCGG 5 cut(s) 256, 394, 509, 809, 1295
HphI GGTGA 2 cut(s) 493, 1289
Hpy166II GTNNAC 4 cut(s) 238, 325, 496, 1020
Hpy188I TCNGA 9 cut(s) 27, 208, 458, 543, 612, 636, 715, 1035, 1161
Hpy188III TCNNGA 7 cut(s) 79, 91, 109, 557, 617, 1075, 1188
Hpy8I GTNNAC 4 cut(s) 238, 325, 496, 1020
Hpy99I CGWCG 7 cut(s) 62, 104, 239, 326, 416, 497, 563
HpyAV CCTTC 3 cut(s) 164, 301, 430
HpyCH4III ACNGT 3 cut(s) 641, 776, 789
HpyCH4IV ACGT 1 cut(s) 321
HpyCH4V TGCA 2 cut(s) 925, 1320
HpyF10VI GCNNNNNNNGC 4 cut(s) 518, 685, 892, 922
HpyF3I CTNAG 4 cut(s) 80, 455, 542, 1160
HpySE526I ACGT 1 cut(s) 321
Hsp92I GRCGYC 2 cut(s) 102, 465
Hsp92II CATG 6 cut(s) 520, 529, 1084, 1153, 1177, 1235
HspAI GCGC 7 cut(s) 243, 342, 362, 465, 490, 806, 899
KasI GGCGCC 1 cut(s) 464
KroI GCCGGC 2 cut(s) 508, 808
KroNI GCCGGC 2 cut(s) 510, 810
Kzo9I GATC 2 cut(s) 958, 1030
LmnI GCTCC 6 cut(s) 357, 375, 628, 850, 870, 1003
Lsp1109I GCAGC 4 cut(s) 326, 925, 993, 1058
MaeI CTAG 1 cut(s) 1244
MaeII ACGT 1 cut(s) 321
MaeIII GTNAC 2 cut(s) 346, 1168
MalI GATC 2 cut(s) 960, 1032
MboI GATC 2 cut(s) 958, 1030
MboII GAAGA 9 cut(s) 79, 214, 271, 376, 667, 673, 694, 1112, 1130
MflI RGATCY 1 cut(s) 958
MhlI GDGCHC 5 cut(s) 183, 372, 534, 548, 798
MluCI AATT 6 cut(s) 167, 623, 748, 919, 928, 1207
Mly113I GGCGCC 1 cut(s) 465
MlyI GAGTC 1 cut(s) 320
MroNI GCCGGC 2 cut(s) 508, 808
MseI TTAA 4 cut(s) 918, 939, 1304, 1327
MslI CAYNNNNRTG 1 cut(s) 363
MspA1I CMGCKG 1 cut(s) 339
MspI CCGG 5 cut(s) 256, 394, 509, 809, 1295
MspR9I CCNGG 3 cut(s) 331, 395, 815
MvaI CCWGG 2 cut(s) 331, 815
MvnI CGCG 6 cut(s) 216, 243, 362, 364, 490, 492
MwoI GCNNNNNNNGC 4 cut(s) 518, 685, 892, 922
NaeI GCCGGC 2 cut(s) 510, 810
NarI GGCGCC 1 cut(s) 465
NciI CCSGG 1 cut(s) 395
NcoI CCATGG 1 cut(s) 525
NdeII GATC 2 cut(s) 958, 1030
NgoMIV GCCGGC 2 cut(s) 508, 808
NlaIII CATG 6 cut(s) 520, 529, 1084, 1153, 1177, 1235
NlaIV GGNNCC 6 cut(s) 29, 149, 260, 335, 466, 960
NmeAIII GCCGAG 1 cut(s) 253
NmuCI GTSAC 2 cut(s) 346, 1168
NspI RCATGY 1 cut(s) 1153
OliI CACNNNNGTG 1 cut(s) 363
PaeR7I CTCGAG 1 cut(s) 617
PcsI WCGNNNNNNNCGW 4 cut(s) 54, 231, 318, 608
PdiI GCCGGC 2 cut(s) 510, 810
PfeI GAWTC 3 cut(s) 613, 710, 1143
PflFI GACNNNGTC 2 cut(s) 104, 563
PflMI CCANNNNNTGG 1 cut(s) 132
PkrI GCNGC 5 cut(s) 341, 523, 915, 1008, 1048
PleI GAGTC 1 cut(s) 320
PluTI GGCGCC 1 cut(s) 468
PpsI GAGTC 1 cut(s) 320
Psp124BI GAGCTC 2 cut(s) 372, 548
Psp6I CCWGG 2 cut(s) 329, 813
PspGI CCWGG 2 cut(s) 329, 813
PspN4I GGNNCC 6 cut(s) 29, 149, 260, 335, 466, 960
PspPI GGNCC 6 cut(s) 147, 258, 334, 577, 811, 1240
PsrI GAACNNNNNNTAC 2 cut(s) 1003, 1035
PsuI RGATCY 1 cut(s) 958
PsyI GACNNNGTC 2 cut(s) 104, 563
RsaI GTAC 2 cut(s) 401, 434
RsaNI GTAC 2 cut(s) 400, 433
RseI CAYNNNNRTG 1 cut(s) 363
SacI GAGCTC 2 cut(s) 372, 548
SalI GTCGAC 3 cut(s) 236, 323, 494
SaqAI TTAA 4 cut(s) 918, 939, 1304, 1327
SatI GCNGC 5 cut(s) 340, 522, 914, 1007, 1047
Sau3AI GATC 2 cut(s) 958, 1030
Sau96I GGNCC 6 cut(s) 147, 258, 334, 577, 811, 1240
SchI GAGTC 1 cut(s) 320
ScrFI CCNGG 3 cut(s) 331, 395, 815
SduI GDGCHC 5 cut(s) 183, 372, 534, 548, 798
SfcI CTRYAG 1 cut(s) 775
SfoI GGCGCC 1 cut(s) 466
Sfr274I CTCGAG 1 cut(s) 617
SinI GGWCC 4 cut(s) 147, 334, 577, 1240
SlaI CTCGAG 1 cut(s) 617
SmiMI CAYNNNNRTG 1 cut(s) 363
SmlI CTYRAG 5 cut(s) 617, 797, 890, 1055, 1073
SmoI CTYRAG 5 cut(s) 617, 797, 890, 1055, 1073
Sse9I AATT 6 cut(s) 167, 623, 748, 919, 928, 1207
SsiI CCGC 7 cut(s) 151, 200, 214, 241, 307, 337, 522
SspDI GGCGCC 1 cut(s) 464
SspI AATATT 1 cut(s) 1219
SspMI CTAG 1 cut(s) 1244
SstI GAGCTC 2 cut(s) 372, 548
StyD4I CCNGG 3 cut(s) 329, 393, 813
StyI CCWWGG 1 cut(s) 525
TaaI ACNGT 3 cut(s) 641, 776, 789
TaiI ACGT 1 cut(s) 324
TaqII GACCGA 1 cut(s) 425
TasI AATT 6 cut(s) 167, 623, 748, 919, 928, 1207
TauI GCSGC 1 cut(s) 524
TfiI GAWTC 3 cut(s) 613, 710, 1143
Tru1I TTAA 4 cut(s) 918, 939, 1304, 1327
Tru9I TTAA 4 cut(s) 918, 939, 1304, 1327
TscAI CASTG 1 cut(s) 1056
TseFI GTSAC 2 cut(s) 346, 1168
TseI GCWGC 4 cut(s) 339, 913, 1006, 1046
Tsp45I GTSAC 2 cut(s) 346, 1168
TspDTI ATGAA 4 cut(s) 283, 376, 674, 1190
TspGWI ACGGA 1 cut(s) 590
TspRI CASTG 1 cut(s) 1056
Tth111I GACNNNGTC 2 cut(s) 104, 563
Van91I CCANNNNNTGG 1 cut(s) 132
VpaK11BI GGWCC 4 cut(s) 147, 334, 577, 1240
XapI RAATTY 2 cut(s) 167, 748
XceI RCATGY 1 cut(s) 1153
XhoI CTCGAG 1 cut(s) 617
XmiI GTMKAC 4 cut(s) 237, 324, 495, 1019
XspI CTAG 1 cut(s) 1244
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.