FvH4_6g44000

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000349
Physical Location & Seq
Forward (+)
33956208 .. 33959166
2959 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g44000.t1

Sequence Viewer

Length: 1341 bp
ATGGAAGCGACGGCGATCACTCATCGGAACCCAAACCAGACCCTAAACGACCTCCCGGACGAAATCCTCCTCCACATCCTGACCTTCTTCCCGACCCTCGACGCCGTCCAGACCTCCCTCATCTCCCGCAAATGGCGGCCCCTCTGGTCCCGCCTCCGCTTCCTCCGCTTCTCCTACGAGCACTTCCCCCTAAATGACCCTCCCTCCGATAACCGCGACTTCTTCGCCGAGTTCGTCGACCGCGCCCTCATCCTCCGTCCCCACCACCCCATCGACCTCTTCTCCCTCTCCTTCATCTACCATCACCGCTTCGGCCTCCACGTCGACTCCTGGGTCCGCTCCGCCGTCACGCACCTCCGCGCGCGTGAGCTCCACCTCGACTTCTTCATCGACCGCGAGTACCACCAGACCGACGAGTCCTTCAACCACAAGTACGACTTCCCCTTCGCCGTCCTCCGAAATGGCGCCGTCGCGGTCCTGAAGCTCACGCGCGTGGAGCTCACTCTCCCGGCGAGCATGGCCGCCATGGGGCTCGTCTCCCTGAGCTCAATGTACCTGGATGAGGTGTATCTGACGGACCAGAATGTTACTGATTTGATTTCTGGTTGTCCGAATCTTGAGGAATTGGAGCTTCAGCATTGTTGGGGGATGGAGAAGATGAAGATACGTAGCAAAAAGATGAAGAAGCTGGCGTTTGCTTACATTTACGACTCGGAATCCAGGAACAGTATTGAGATTGATTGCCCGAATTTGTGTTCGATAAGCTTTGATAACTGTAGTTTCACACAGTTTGTGCTTAAGTATGCGCCGGCCCTGGTTGAGTTTAGTGTTAGCATTGTGCAAATAGAGGAGCAGGATTATGATCTGTGGTGTAGGATTGTGAAGCTACTTGAGCAGGCGCCGTATGTGAAGCAGCTTAATTTGCAAAATTGGTGGTGTAAGCTTCTTACATCAAAGGATCCTTTGTCCAAAAGTTTTAAGCTTCACAACCTCAACCATTTGGAGCTGCAAACTGGGTATACCCATTGTGATCTGGTTGGCTTGGCAGCACTGCTTGAGCTTTCTCCCAATCTTGAGAACATGATTTTAGATTACGTTGACAATAATGCGAAAGATGGTATAGTACCTGAAGAGTTCTCAAATAAACCAGATAGATTCAACATGCCGAGTCTGAAGCAAGTGACCATGAAATCATATTCTGGAACTCCAGATGAAGCTAATTTTGTGAATATTTTGAAAAAGCATGCAGTGGTCCTAGAAAAGATAGTAATCCATCACATCGAAGTTGGTGAGAAATCATTCTCTCCGGTAGTTATAAGTAAAATCCCTTGCAAGGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBD KIX_2

Protein Analysis

447

Amino Acids

51.65

Weight (kDa)

6.02

Isoelectric Point (pI)

43.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 15 - 56 1.1e-08 F-box domain
F-box-like PF12937 15 - 46 8.7e-06 F-box-like
LRR_At1g61320_AtMIF1 PF23622 85 - 424 1.8e-27 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 109 - 254 7.6e-10 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000349)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G43415
fragaria_vesca FvH4_1g28610 FvH4_6g43940 FvH4_6g43940 FvH4_6g43940 FvH4_6g43950 FvH4_6g43960 FvH4_6g43970 FvH4_6g43990 FvH4_6g44000 FvH4_7g14510
malus_domestica MD09G1101800.v1.1 MD17G1089200.v1.1 MD17G1089300.v1.1 MD17G1089400.v1.1 MD17G1089500.v1.1 MD17G1089600.v1.1
prunus_persica Prupe.3G223900_v2.0.a1 Prupe.3G223900_v2.0.a1 Prupe.3G224000_v2.0.a1 Prupe.3G224100_v2.0.a1 Prupe.3G224200_v2.0.a1
pyrus_communis pycom09g02550 pycom17g02610 pycom17g08610 pycom17g08620 pycom17g08630 pycom17g08640 pycom17g08670
rosa_chinensis RchiOBHm_Chr2g0160711 RchiOBHm_Chr2g0160721 RchiOBHm_Chr2g0160731 RchiOBHm_Chr2g0160741 RchiOBHm_Chr4g0433831 RchiOBHm_Chr7g0197991
rosa_laevigata RLG00000001614 RLG00000002340 RLG00000003895 RLG00000005223 RLG00000021235 RLG00000021236 RLG00000021237 RLG00000021238 RLG00000028664 RLG00000029542 RLG00000029654 RLG00000035034
rosa_multiflora Rmu_co8177938.1_g000001 Rmu_co8474907.1_g000002 Rmu_sc0000064.1_g000011 Rmu_sc0000221.1_g000038 Rmu_sc0002773.1_g000001 Rmu_sc0002773.1_g000004 Rmu_sc0002773.1_g000006 Rmu_sc0002773.1_g000008 Rmu_sc0003465.1_g000005 Rmu_sc0006325.1_g000010 Rmu_sc0024525.1_g000002 Rmu_sc0030848.1_g000001 Rmu_sc0030848.1_g000002 Rmu_sc0030848.1_g000004
rosa_roxburghii Rroxscaffold_2G00089410 Rroxscaffold_2G00089420 Rroxscaffold_2G00089430 Rroxscaffold_2G00089450 Rroxscaffold_2G00089460 Rroxscaffold_3G00258030 Rroxscaffold_5G00351500
rosa_rugosa Rorug02G0485200 Rorug02G0485400 Rorug02G0485500 Rorug02G0485600 Rorug06G0149200
rosa_samantha Rh1AG011000 Rh2AG501800 Rh2AG550200 Rh2AG550300 Rh2AG550400 Rh2AG550500 Rh2BG217000 Rh2BG564800 Rh2BG564900 Rh2BG565000 Rh2BG565100 Rh2BG607100 Rh2CG487700 Rh2CG534600 Rh2CG534700 Rh2CG534800 Rh2CG534900 Rh2DG573500 Rh2DG573600 Rh2DG574000 Rh2DG574100 Rh3CG290600 Rh7AG168600 Rh7BG171600 Rh7BG171700 Rh7CG178100 Rh7DG170700 Rh7DG170900
rosa_wichuraiana Rw2G022070 Rw2G045590 Rw2G045600 Rw2G045610 Rw2G045620 Rw3G021600 Rw7G014730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1316
AasI GACNNNNNNGTC 2 cut(s) 332, 415
AccB1I GGYRCC 2 cut(s) 464, 898
AccBSI CCGCTC 1 cut(s) 339
AccI GTMKAC 3 cut(s) 237, 324, 1019
AccII CGCG 9 cut(s) 216, 243, 360, 362, 364, 396, 473, 490, 492
AclWI GGATC 2 cut(s) 953, 966
AcoI YGGCCR 1 cut(s) 519
AcsI RAATTY 1 cut(s) 748
AcuI CTGAAG 4 cut(s) 500, 617, 1149, 1193
AcyI GRCGYC 3 cut(s) 102, 465, 899
AfaI GTAC 4 cut(s) 401, 434, 554, 1125
AfiI CCNNNNNNNGG 4 cut(s) 132, 528, 562, 1333
AflII CTTAAG 1 cut(s) 797
AgsI TTSAA 3 cut(s) 424, 1159, 1237
AjiI CACGTC 1 cut(s) 322
AjnI CCWGG 4 cut(s) 329, 555, 719, 813
AleI CACNNNNGTG 1 cut(s) 491
Alw21I GWGCWC 4 cut(s) 183, 372, 501, 548
Alw26I GTCTC 1 cut(s) 541
AlwI GGATC 2 cut(s) 953, 966
AoxI GGCC 4 cut(s) 137, 313, 519, 810
ApeKI GCWGC 3 cut(s) 913, 1006, 1046
ApoI RAATTY 1 cut(s) 748
ArsI GACNNNNNNTTYG 2 cut(s) 428, 460
Asp700I GAANNNNTTC 1 cut(s) 1298
AspLEI GCGC 7 cut(s) 245, 362, 364, 467, 492, 808, 901
AspS9I GGNCC 7 cut(s) 138, 147, 334, 475, 577, 811, 1252
AsuC2I CCSGG 2 cut(s) 56, 509
AsuHPI GGTGA 2 cut(s) 296, 1301
AvaII GGWCC 5 cut(s) 147, 334, 475, 577, 1252
BamHI GGATCC 1 cut(s) 958
BanI GGYRCC 2 cut(s) 464, 898
BanII GRGCYC 4 cut(s) 372, 501, 534, 548
Bbv12I GWGCWC 4 cut(s) 183, 372, 501, 548
BbvI GCAGC 3 cut(s) 925, 993, 1058
BccI CCATC 5 cut(s) 278, 309, 643, 1109, 1281
BceAI ACGGC 6 cut(s) 27, 89, 329, 434, 452, 886
BciT130I CCWGG 4 cut(s) 331, 557, 721, 815
BcnI CCSGG 2 cut(s) 56, 509
BcoDI GTCTC 1 cut(s) 541
BfaI CTAG 1 cut(s) 1256
BfmI CTRYAG 1 cut(s) 775
BfoI RGCGCY 2 cut(s) 468, 902
BfrI CTTAAG 1 cut(s) 797
BisI GCNGC 5 cut(s) 137, 522, 914, 1007, 1047
BlsI GCNGC 5 cut(s) 138, 523, 915, 1008, 1048
Bme1390I CCNGG 6 cut(s) 56, 331, 509, 557, 721, 815
Bme18I GGWCC 5 cut(s) 147, 334, 475, 577, 1252
BmgBI CACGTC 1 cut(s) 322
BmgT120I GGNCC 7 cut(s) 138, 147, 334, 475, 577, 811, 1252
BmiI GGNNCC 7 cut(s) 29, 140, 149, 335, 466, 900, 960
BmrFI CCNGG 6 cut(s) 56, 331, 509, 557, 721, 815
BmrI ACTGGG 1 cut(s) 1023
BmuI ACTGGG 1 cut(s) 1023
BpmI CTGGAG 1 cut(s) 1191
Bpu10I CCTNAGC 1 cut(s) 542
BpuEI CTTGAG 4 cut(s) 638, 911, 1076, 1094
BpuMI CCSGG 2 cut(s) 56, 509
BsaAI YACGTR 1 cut(s) 668
BsaBI GATNNNNATC 2 cut(s) 861, 1268
BsaHI GRCGYC 3 cut(s) 102, 465, 899
BsaJI CCNNGG 3 cut(s) 330, 525, 813
BsaWI WCCGGW 1 cut(s) 1306
BsaXI ACNNNNNCTCC 6 cut(s) 188, 218, 266, 296, 311, 341
Bsc4I CCNNNNNNNGG 4 cut(s) 132, 528, 562, 1333
Bse118I RCCGGY 1 cut(s) 808
Bse1I ACTGG 1 cut(s) 1018
Bse8I GATNNNNATC 2 cut(s) 861, 1268
BseBI CCWGG 4 cut(s) 331, 557, 721, 815
BseDI CCNNGG 3 cut(s) 330, 525, 813
BseGI GGATG 4 cut(s) 75, 249, 565, 654
BseJI GATNNNNATC 2 cut(s) 861, 1268
BseLI CCNNNNNNNGG 4 cut(s) 132, 528, 562, 1333
BseMII CTCAG 1 cut(s) 533
BseNI ACTGG 1 cut(s) 1018
BsePI GCGCGC 1 cut(s) 360
BseRI GAGGAG 2 cut(s) 59, 863
BseXI GCAGC 3 cut(s) 925, 993, 1058
Bsh1236I CGCG 9 cut(s) 216, 243, 360, 362, 364, 396, 473, 490, 492
Bsh1285I CGRYCG 2 cut(s) 241, 394
BshFI GGCC 4 cut(s) 139, 315, 521, 812
BshNI GGYRCC 2 cut(s) 464, 898
BsiEI CGRYCG 2 cut(s) 241, 394
BsiHKAI GWGCWC 4 cut(s) 183, 372, 501, 548
BsiSI CCGG 4 cut(s) 56, 509, 809, 1307
BslFI GGGAC 2 cut(s) 133, 243
BslI CCNNNNNNNGG 4 cut(s) 132, 528, 562, 1333
BsmAI GTCTC 1 cut(s) 541
BsmBI CGTCTC 1 cut(s) 541
BsmFI GGGAC 2 cut(s) 133, 243
BsnI GGCC 4 cut(s) 139, 315, 521, 812
Bsp1286I GDGCHC 5 cut(s) 183, 372, 501, 534, 548
Bsp143I GATC 4 cut(s) 15, 862, 958, 1030
Bsp19I CCATGG 1 cut(s) 525
BspANI GGCC 4 cut(s) 139, 315, 521, 812
BspCNI CTCAG 1 cut(s) 534
BspFNI CGCG 9 cut(s) 216, 243, 360, 362, 364, 396, 473, 490, 492
BspLI GGNNCC 7 cut(s) 29, 140, 149, 335, 466, 900, 960
BspPI GGATC 2 cut(s) 953, 966
BspT107I GGYRCC 2 cut(s) 464, 898
BspTI CTTAAG 1 cut(s) 797
BsrBI CCGCTC 1 cut(s) 339
BsrFI RCCGGY 1 cut(s) 808
BsrI ACTGG 1 cut(s) 1018
BssAI RCCGGY 1 cut(s) 808
BssECI CCNNGG 3 cut(s) 330, 525, 813
BssHII GCGCGC 1 cut(s) 360
BssMI GATC 4 cut(s) 15, 862, 958, 1030
BssNAI GTATAC 1 cut(s) 1020
BssNI GRCGYC 3 cut(s) 102, 465, 899
BssT1I CCWWGG 1 cut(s) 525
Bst1107I GTATAC 1 cut(s) 1020
Bst2UI CCWGG 4 cut(s) 331, 557, 721, 815
Bst4CI ACNGT 3 cut(s) 728, 776, 789
Bst6I CTCTTC 2 cut(s) 284, 1125
BstACI GRCGYC 3 cut(s) 102, 465, 899
BstAFI CTTAAG 1 cut(s) 797
BstBAI YACGTR 1 cut(s) 668
BstC8I GCNNGC 6 cut(s) 362, 514, 690, 810, 897, 1245
BstDEI CTNAG 1 cut(s) 542
BstDSI CCRYGG 1 cut(s) 525
BstENI CCTNNNNNAGG 1 cut(s) 560
BstF5I GGATG 4 cut(s) 75, 249, 565, 654
BstFNI CGCG 9 cut(s) 216, 243, 360, 362, 364, 396, 473, 490, 492
BstH2I RGCGCY 2 cut(s) 468, 902
BstHHI GCGC 7 cut(s) 245, 362, 364, 467, 492, 808, 901
BstKTI GATC 4 cut(s) 18, 865, 961, 1033
BstMAI GTCTC 1 cut(s) 541
BstMBI GATC 4 cut(s) 15, 862, 958, 1030
BstMCI CGRYCG 2 cut(s) 241, 394
BstMWI GCNNNNNNNGC 5 cut(s) 165, 496, 518, 892, 922
BstNI CCWGG 4 cut(s) 331, 557, 721, 815
BstNSI RCATGY 2 cut(s) 1165, 1247
BstSCI CCNGG 6 cut(s) 54, 329, 507, 555, 719, 813
BstSFI CTRYAG 1 cut(s) 775
BstSNI TACGTA 1 cut(s) 668
BstUI CGCG 9 cut(s) 216, 243, 360, 362, 364, 396, 473, 490, 492
BstV1I GCAGC 3 cut(s) 925, 993, 1058
BstX2I RGATCY 1 cut(s) 958
BstYI RGATCY 1 cut(s) 958
BstZ17I GTATAC 1 cut(s) 1020
BsuRI GGCC 4 cut(s) 139, 315, 521, 812
BtgI CCRYGG 1 cut(s) 525
BtrI CACGTC 1 cut(s) 322
BtsCI GGATG 4 cut(s) 75, 249, 565, 654
BtsI GCAGTG 2 cut(s) 1049, 1254
BtsIMutI CAGTG 2 cut(s) 1049, 1254
Cac8I GCNNGC 6 cut(s) 362, 514, 690, 810, 897, 1245
CfoI GCGC 7 cut(s) 245, 362, 364, 467, 492, 808, 901
Cfr10I RCCGGY 1 cut(s) 808
Cfr13I GGNCC 7 cut(s) 138, 147, 334, 475, 577, 811, 1252
CseI GACGC 1 cut(s) 110
Csp6I GTAC 4 cut(s) 400, 433, 553, 1124
CspCI CAANNNNNGTGG 2 cut(s) 914, 949
CviAII CATG 6 cut(s) 517, 526, 1081, 1162, 1186, 1244
CviQI GTAC 4 cut(s) 400, 433, 553, 1124
DdeI CTNAG 1 cut(s) 542
DinI GGCGCC 2 cut(s) 466, 900
DpnI GATC 4 cut(s) 17, 864, 960, 1032
DpnII GATC 4 cut(s) 15, 862, 958, 1030
DrdI GACNNNNNNGTC 2 cut(s) 332, 415
DseDI GACNNNNNNGTC 2 cut(s) 332, 415
EaeI YGGCCR 1 cut(s) 519
Eam1104I CTCTTC 2 cut(s) 284, 1125
EarI CTCTTC 2 cut(s) 284, 1125
EciI GGCGGA 1 cut(s) 331
Ecl136II GAGCTC 3 cut(s) 370, 499, 546
Eco105I TACGTA 1 cut(s) 668
Eco130I CCWWGG 1 cut(s) 525
Eco24I GRGCYC 4 cut(s) 372, 501, 534, 548
Eco47I GGWCC 5 cut(s) 147, 334, 475, 577, 1252
Eco53kI GAGCTC 3 cut(s) 370, 499, 546
Eco57I CTGAAG 4 cut(s) 500, 617, 1149, 1193
EcoICRI GAGCTC 3 cut(s) 370, 499, 546
EcoNI CCTNNNNNAGG 1 cut(s) 560
EcoRII CCWGG 4 cut(s) 329, 555, 719, 813
EcoT14I CCWWGG 1 cut(s) 525
EcoT38I GRGCYC 4 cut(s) 372, 501, 534, 548
EgeI GGCGCC 2 cut(s) 466, 900
EheI GGCGCC 2 cut(s) 466, 900
ErhI CCWWGG 1 cut(s) 525
Esp3I CGTCTC 1 cut(s) 541
FaeI CATG 6 cut(s) 520, 529, 1084, 1165, 1189, 1247
FalI AAGNNNNNCTT 2 cut(s) 422, 454
FaqI GGGAC 2 cut(s) 133, 243
FatI CATG 6 cut(s) 516, 525, 1080, 1161, 1185, 1243
FauI CCCGC 2 cut(s) 134, 158
FblI GTMKAC 3 cut(s) 237, 324, 1019
Fnu4HI GCNGC 5 cut(s) 137, 522, 914, 1007, 1047
FokI GGATG 4 cut(s) 62, 236, 572, 661
FriOI GRGCYC 4 cut(s) 372, 501, 534, 548
Fsp4HI GCNGC 5 cut(s) 137, 522, 914, 1007, 1047
FspBI CTAG 1 cut(s) 1256
GlaI GCGC 7 cut(s) 244, 361, 363, 466, 491, 807, 900
GluI GCNGC 5 cut(s) 137, 522, 914, 1007, 1047
GsuI CTGGAG 1 cut(s) 1191
HaeII RGCGCY 2 cut(s) 468, 902
HaeIII GGCC 4 cut(s) 139, 315, 521, 812
HapII CCGG 4 cut(s) 56, 509, 809, 1307
HgaI GACGC 1 cut(s) 110
HhaI GCGC 7 cut(s) 245, 362, 364, 467, 492, 808, 901
Hin1I GRCGYC 3 cut(s) 102, 465, 899
Hin1II CATG 6 cut(s) 520, 529, 1084, 1165, 1189, 1247
Hin6I GCGC 7 cut(s) 243, 360, 362, 465, 490, 806, 899
HinP1I GCGC 7 cut(s) 243, 360, 362, 465, 490, 806, 899
HincII GTYRAC 3 cut(s) 238, 325, 1099
HindII GTYRAC 3 cut(s) 238, 325, 1099
HindIII AAGCTT 3 cut(s) 763, 941, 980
HinfI GANTC 7 cut(s) 326, 416, 613, 710, 716, 1155, 1168
HpaII CCGG 4 cut(s) 56, 509, 809, 1307
HphI GGTGA 2 cut(s) 296, 1301
Hpy166II GTNNAC 4 cut(s) 238, 325, 1020, 1099
Hpy188I TCNGA 7 cut(s) 27, 208, 458, 573, 612, 715, 1173
Hpy188III TCNNGA 8 cut(s) 79, 91, 109, 478, 617, 1073, 1200, 1208
Hpy8I GTNNAC 4 cut(s) 238, 325, 1020, 1099
Hpy99I CGWCG 6 cut(s) 13, 104, 239, 326, 416, 473
HpyAV CCTTC 4 cut(s) 94, 301, 430, 454
HpyCH4III ACNGT 3 cut(s) 728, 776, 789
HpyCH4IV ACGT 3 cut(s) 321, 667, 1095
HpyCH4V TGCA 5 cut(s) 841, 925, 1009, 1247, 1332
HpyF10VI GCNNNNNNNGC 5 cut(s) 165, 496, 518, 892, 922
HpyF3I CTNAG 1 cut(s) 542
HpySE526I ACGT 3 cut(s) 321, 667, 1095
Hsp92I GRCGYC 3 cut(s) 102, 465, 899
Hsp92II CATG 6 cut(s) 520, 529, 1084, 1165, 1189, 1247
HspAI GCGC 7 cut(s) 243, 360, 362, 465, 490, 806, 899
KasI GGCGCC 2 cut(s) 464, 898
KroI GCCGGC 1 cut(s) 808
KroNI GCCGGC 1 cut(s) 810
Kzo9I GATC 4 cut(s) 15, 862, 958, 1030
LmnI GCTCC 6 cut(s) 344, 375, 496, 628, 850, 1003
Lsp1109I GCAGC 3 cut(s) 925, 993, 1058
MaeI CTAG 1 cut(s) 1256
MaeII ACGT 3 cut(s) 321, 667, 1095
MaeIII GTNAC 3 cut(s) 346, 586, 1180
MalI GATC 4 cut(s) 17, 864, 960, 1032
MauBI CGCGCGCG 1 cut(s) 360
MbiI CCGCTC 1 cut(s) 339
MboI GATC 4 cut(s) 15, 862, 958, 1030
MboII GAAGA 8 cut(s) 79, 214, 271, 376, 667, 673, 694, 1142
MflI RGATCY 1 cut(s) 958
MhlI GDGCHC 5 cut(s) 183, 372, 501, 534, 548
MluCI AATT 5 cut(s) 623, 748, 919, 928, 1219
Mly113I GGCGCC 2 cut(s) 465, 899
MlyI GAGTC 4 cut(s) 320, 425, 704, 1177
MroNI GCCGGC 1 cut(s) 808
MroXI GAANNNNTTC 1 cut(s) 1298
MseI TTAA 4 cut(s) 798, 918, 978, 1339
MslI CAYNNNNRTG 1 cut(s) 491
MspCI CTTAAG 1 cut(s) 797
MspI CCGG 4 cut(s) 56, 509, 809, 1307
MspR9I CCNGG 6 cut(s) 56, 331, 509, 557, 721, 815
MvaI CCWGG 4 cut(s) 331, 557, 721, 815
MvnI CGCG 9 cut(s) 216, 243, 360, 362, 364, 396, 473, 490, 492
MwoI GCNNNNNNNGC 5 cut(s) 165, 496, 518, 892, 922
NaeI GCCGGC 1 cut(s) 810
NarI GGCGCC 2 cut(s) 465, 899
NciI CCSGG 2 cut(s) 56, 509
NcoI CCATGG 1 cut(s) 525
NdeII GATC 4 cut(s) 15, 862, 958, 1030
NgoMIV GCCGGC 1 cut(s) 808
NlaIII CATG 6 cut(s) 520, 529, 1084, 1165, 1189, 1247
NlaIV GGNNCC 7 cut(s) 29, 140, 149, 335, 466, 900, 960
NmeAIII GCCGAG 2 cut(s) 253, 1191
NmuCI GTSAC 2 cut(s) 346, 1180
NspI RCATGY 2 cut(s) 1165, 1247
OliI CACNNNNGTG 1 cut(s) 491
PaeI GCATGC 1 cut(s) 1247
PauI GCGCGC 1 cut(s) 360
PcsI WCGNNNNNNNCGW 2 cut(s) 231, 318
PdiI GCCGGC 1 cut(s) 810
PdmI GAANNNNTTC 1 cut(s) 1298
PfeI GAWTC 3 cut(s) 613, 716, 1155
PflFI GACNNNGTC 1 cut(s) 104
PfoI TCCNGGA 2 cut(s) 54, 719
PkrI GCNGC 5 cut(s) 138, 523, 915, 1008, 1048
PleI GAGTC 4 cut(s) 320, 424, 704, 1176
PluTI GGCGCC 2 cut(s) 468, 902
PpsI GAGTC 4 cut(s) 320, 424, 704, 1176
Ppu21I YACGTR 1 cut(s) 668
PsiI TTATAA 1 cut(s) 1316
Psp124BI GAGCTC 3 cut(s) 372, 501, 548
Psp6I CCWGG 4 cut(s) 329, 555, 719, 813
PspGI CCWGG 4 cut(s) 329, 555, 719, 813
PspN4I GGNNCC 7 cut(s) 29, 140, 149, 335, 466, 900, 960
PspPI GGNCC 7 cut(s) 138, 147, 334, 475, 577, 811, 1252
PsuI RGATCY 1 cut(s) 958
PsyI GACNNNGTC 1 cut(s) 104
PteI GCGCGC 1 cut(s) 360
RsaI GTAC 4 cut(s) 401, 434, 554, 1125
RsaNI GTAC 4 cut(s) 400, 433, 553, 1124
RseI CAYNNNNRTG 1 cut(s) 491
SacI GAGCTC 3 cut(s) 372, 501, 548
SalI GTCGAC 2 cut(s) 236, 323
SaqAI TTAA 4 cut(s) 798, 918, 978, 1339
SatI GCNGC 5 cut(s) 137, 522, 914, 1007, 1047
Sau3AI GATC 4 cut(s) 15, 862, 958, 1030
Sau96I GGNCC 7 cut(s) 138, 147, 334, 475, 577, 811, 1252
SchI GAGTC 4 cut(s) 320, 425, 704, 1177
ScrFI CCNGG 6 cut(s) 56, 331, 509, 557, 721, 815
SduI GDGCHC 5 cut(s) 183, 372, 501, 534, 548
SfcI CTRYAG 1 cut(s) 775
SfoI GGCGCC 2 cut(s) 466, 900
SinI GGWCC 5 cut(s) 147, 334, 475, 577, 1252
SmiMI CAYNNNNRTG 1 cut(s) 491
SmlI CTYRAG 5 cut(s) 617, 797, 890, 1055, 1073
SmoI CTYRAG 5 cut(s) 617, 797, 890, 1055, 1073
SnaBI TACGTA 1 cut(s) 668
SphI GCATGC 1 cut(s) 1247
Sse9I AATT 5 cut(s) 623, 748, 919, 928, 1219
SspDI GGCGCC 2 cut(s) 464, 898
SspI AATATT 1 cut(s) 1231
SspMI CTAG 1 cut(s) 1256
SstI GAGCTC 3 cut(s) 372, 501, 548
StyD4I CCNGG 6 cut(s) 54, 329, 507, 555, 719, 813
StyI CCWWGG 1 cut(s) 525
TaaI ACNGT 3 cut(s) 728, 776, 789
TaiI ACGT 3 cut(s) 324, 670, 1098
TaqI TCGA 8 cut(s) 99, 237, 273, 324, 378, 390, 758, 1281
TaqII GACCGA 1 cut(s) 425
TasI AATT 5 cut(s) 623, 748, 919, 928, 1219
TauI GCSGC 2 cut(s) 139, 524
TfiI GAWTC 3 cut(s) 613, 716, 1155
Tru1I TTAA 4 cut(s) 798, 918, 978, 1339
Tru9I TTAA 4 cut(s) 798, 918, 978, 1339
TscAI CASTG 2 cut(s) 1056, 1254
TseFI GTSAC 2 cut(s) 346, 1180
TseI GCWGC 3 cut(s) 913, 1006, 1046
Tsp45I GTSAC 2 cut(s) 346, 1180
TspDTI ATGAA 6 cut(s) 283, 376, 674, 695, 1202, 1227
TspGWI ACGGA 2 cut(s) 245, 590
TspRI CASTG 2 cut(s) 1056, 1254
Tth111I GACNNNGTC 1 cut(s) 104
Vha464I CTTAAG 1 cut(s) 797
VpaK11BI GGWCC 5 cut(s) 147, 334, 475, 577, 1252
XagI CCTNNNNNAGG 1 cut(s) 560
XapI RAATTY 1 cut(s) 748
XceI RCATGY 2 cut(s) 1165, 1247
XmiI GTMKAC 3 cut(s) 237, 324, 1019
XmnI GAANNNNTTC 1 cut(s) 1298
XspI CTAG 1 cut(s) 1256
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.