RLG00000021237

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000349
Physical Location & Seq
Forward (+)
73163266 .. 73167826
4561 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000021237

Sequence Viewer

Length: 1749 bp
ATGGCAGCAGAGACGAGCACTCAAGTCCTTCTCCTCCACGCCAAACGCCTCCGCGGCCCTAACCGGAGCCTCGACGACCTCCCCGACGAGATCCTCCTCCACATCCTATCCTTCCTCCCCACCCTCGACGCCGTCAACACCTCTCTCATCTCCCGCAGATGGCGACCGCTCTGGTCCCTCGTTCCCTCCTTGAACTTCTCCTACCACCTCTTCCCTCCCGCCCCCGAATCCGATCTCAACCCGACCCAGGCCCAGGCCCAATTCTTCGCCGACTTCGTCTATCGCACTCTCATTCTCCGCCCCGACTCTCCCATCCAAACCTTCCGCCTCTCCTTCGTCTTCCACCAAGGCTACCACATCCACGTCGACTCTTGGATCCTTTGCGCCGTCACGCGCCTCAAGGCGCGTCATCTCCACCTCGACTTCTTCATCGACGATAACTTTTATGATTTTCATCTCTCGTTGCTCAGACATGGATGTGTAGAAGTCCTGAGGCTCAAGCATTGCTTCCTCACATTGCCGGCTAACATGTCCGCAATGAATCTCTGCTCACTGAGGTCAATTTTTATCGAACGAATTGATCTGACGGATCAGATGGTCCGGGATTTGATTTCGGGGTGTCGGAATCTCGAGGACTTGGAGCTCCGGAGCTGTGTGGGGTTGAAGAATTTGATTATATGTAGCAGTAGGATAAAGACGCTAGCGCTTGGATATGATTATGATACTGAGTCCAAGCAGAGCATTGAGATTGATTGCCCAAATCTTTGTTCGTTGAGTTTTTGTGACTGTAGTTCTGCTCAGTTTGTGCTTAATGAAGCGCCGGCCCTGGTTGAGTTTCGTGTTGATTTTGCTTGCTTAACTGATAAGTACTTTGATTTGTGGAATAAGATTGTGAGGCTACTGGAGCAAGCGCCTCATGTTGAGAAGCTTAATGTGCAAAATTGGTGGTATAAGCTTCTAATATCAGAGGATCCTTTCCCTAAAGATTTTAAGCTCAATAATCTCAACCATTTAGAGCTACAGACTGGCCATCCTCAATATGATCTGGTTGGCATGGCTGCACTGCTAAAACTTTGTCCCAATCTCCAGACAATGGTTCTTGATTTCCTTGATGACAAGATGAAAGAAGATGAGAATTTACCGGAAGAGTTCTTAAATGAACTAGTTGAGTTCAACATGCCAAAGCTGAAGAAAGTTACAATCATAGCCATACTCGATGCCATCCACACCTCTCTCATCTCCCGCAAATGGCTAACCCTCTGGTCCCTCGTTCCCTCCTTGGACCACAAGCTCTCCCCTTGCTTTCTTCGCGAGACTGAACTCTTCGCTAAATTCGTCACTCGCGTTCTCGACACTCGCTGCCCCGACTCTCCGTTCATCCAAACCTTCCGCCTATGTTTCGACTACTTTGCGGGCTACGACTCCGACGTCGACTCTTGGATGCACTGCGCCGTCACCCTCCTCCGCGCGCATGAGCTCTACCTCGACTTCTCTGTCAGACATCTGTATGATCGCAAGTACAATTTTCCTTTTCCTGTGCCGCGTAATGGGAGCGTACAAGTCTTGAGCCTTAAAGGCTGCTCGTCTCTTACATTGCCGGCCGACATGTCCACCATGAATCTTTGCTCGTTGAGATCCATGTATCACAAAAGGATTGATTTGACGGACCAGATGGTCCCAGATATGATTATGGGGTGTCCCAATCTCGAGGATCTGAAGCTTAAATACTTGTGTGGGATGAACAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBD KIX_2

Protein Analysis

583

Amino Acids

67.38

Weight (kDa)

5.92

Isoelectric Point (pI)

52.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 24 - 62 1.9e-09 F-box domain
F-box-like PF12937 24 - 55 2.9e-08 F-box-like
LRR_At1g61320_AtMIF1 PF23622 107 - 403 8.9e-24 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 152 - 262 1e-05 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000349)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G43415
fragaria_vesca FvH4_1g28610 FvH4_6g43940 FvH4_6g43940 FvH4_6g43940 FvH4_6g43950 FvH4_6g43960 FvH4_6g43970 FvH4_6g43990 FvH4_6g44000 FvH4_7g14510
malus_domestica MD09G1101800.v1.1 MD17G1089200.v1.1 MD17G1089300.v1.1 MD17G1089400.v1.1 MD17G1089500.v1.1 MD17G1089600.v1.1
prunus_persica Prupe.3G223900_v2.0.a1 Prupe.3G223900_v2.0.a1 Prupe.3G224000_v2.0.a1 Prupe.3G224100_v2.0.a1 Prupe.3G224200_v2.0.a1
pyrus_communis pycom09g02550 pycom17g02610 pycom17g08610 pycom17g08620 pycom17g08630 pycom17g08640 pycom17g08670
rosa_chinensis RchiOBHm_Chr2g0160711 RchiOBHm_Chr2g0160721 RchiOBHm_Chr2g0160731 RchiOBHm_Chr2g0160741 RchiOBHm_Chr4g0433831 RchiOBHm_Chr7g0197991
rosa_laevigata RLG00000001614 RLG00000002340 RLG00000003895 RLG00000005223 RLG00000021235 RLG00000021236 RLG00000021237 RLG00000021238 RLG00000028664 RLG00000029542 RLG00000029654 RLG00000035034
rosa_multiflora Rmu_co8177938.1_g000001 Rmu_co8474907.1_g000002 Rmu_sc0000064.1_g000011 Rmu_sc0000221.1_g000038 Rmu_sc0002773.1_g000001 Rmu_sc0002773.1_g000004 Rmu_sc0002773.1_g000006 Rmu_sc0002773.1_g000008 Rmu_sc0003465.1_g000005 Rmu_sc0006325.1_g000010 Rmu_sc0024525.1_g000002 Rmu_sc0030848.1_g000001 Rmu_sc0030848.1_g000002 Rmu_sc0030848.1_g000004
rosa_roxburghii Rroxscaffold_2G00089410 Rroxscaffold_2G00089420 Rroxscaffold_2G00089430 Rroxscaffold_2G00089450 Rroxscaffold_2G00089460 Rroxscaffold_3G00258030 Rroxscaffold_5G00351500
rosa_rugosa Rorug02G0485200 Rorug02G0485400 Rorug02G0485500 Rorug02G0485600 Rorug06G0149200
rosa_samantha Rh1AG011000 Rh2AG501800 Rh2AG550200 Rh2AG550300 Rh2AG550400 Rh2AG550500 Rh2BG217000 Rh2BG564800 Rh2BG564900 Rh2BG565000 Rh2BG565100 Rh2BG607100 Rh2CG487700 Rh2CG534600 Rh2CG534700 Rh2CG534800 Rh2CG534900 Rh2DG573500 Rh2DG573600 Rh2DG574000 Rh2DG574100 Rh3CG290600 Rh7AG168600 Rh7BG171600 Rh7BG171700 Rh7CG178100 Rh7DG170700 Rh7DG170900
rosa_wichuraiana Rw2G022070 Rw2G045590 Rw2G045600 Rw2G045610 Rw2G045620 Rw3G021600 Rw7G014730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 3 cut(s) 1427, 1493, 1673
AatII GACGTC 1 cut(s) 1431
AccB7I CCANNNNNTGG 1 cut(s) 1093
AccBSI CCGCTC 1 cut(s) 169
AccI GTMKAC 2 cut(s) 366, 1431
AccII CGCG 8 cut(s) 54, 394, 406, 1311, 1344, 1467, 1469, 1543
AccIII TCCGGA 1 cut(s) 645
AclWI GGATC 8 cut(s) 85, 370, 383, 597, 965, 978, 1629, 1719
AcoI YGGCCR 2 cut(s) 1027, 1599
AcsI RAATTY 3 cut(s) 667, 1135, 1331
AcuI CTGAAG 2 cut(s) 1208, 1736
AcyI GRCGYC 2 cut(s) 129, 1428
AfaI GTAC 3 cut(s) 869, 1520, 1557
AfeI AGCGCT 1 cut(s) 705
AfiI CCNNNNNNNGG 6 cut(s) 159, 247, 253, 1093, 1248, 1547
AflIII ACRYGT 2 cut(s) 528, 1605
AgsI TTSAA 3 cut(s) 193, 664, 1174
AhlI ACTAGT 1 cut(s) 1162
AjiI CACGTC 1 cut(s) 364
AjnI CCWGG 3 cut(s) 246, 252, 825
AjuI GAANNNNNNNTTGG 2 cut(s) 751, 783
Alw21I GWGCWC 3 cut(s) 20, 645, 1479
Alw26I GTCTC 3 cut(s) 5, 1307, 1590
AlwI GGATC 8 cut(s) 85, 370, 383, 597, 965, 978, 1629, 1719
Ama87I CYCGRG 2 cut(s) 629, 1706
Aor13HI TCCGGA 1 cut(s) 645
Aor51HI AGCGCT 1 cut(s) 705
AoxI GGCC 6 cut(s) 55, 249, 255, 822, 1027, 1599
ApeKI GCWGC 4 cut(s) 5, 1058, 1359, 1578
ApoI RAATTY 3 cut(s) 667, 1135, 1331
AspLEI GCGC 9 cut(s) 386, 396, 406, 706, 820, 913, 1451, 1469, 1471
AsuC2I CCSGG 1 cut(s) 602
AsuHPI GGTGA 1 cut(s) 1447
AsuNHI GCTAGC 1 cut(s) 700
AvaI CYCGRG 2 cut(s) 629, 1706
AvaII GGWCC 6 cut(s) 174, 598, 1263, 1282, 1666, 1675
AxyI CCTNAGG 1 cut(s) 491
BalI TGGCCA 1 cut(s) 1029
BamHI GGATCC 2 cut(s) 375, 970
BanII GRGCYC 2 cut(s) 645, 1479
BarI GAAGNNNNNNTAC 2 cut(s) 1709, 1741
BbsI GAAGAC 1 cut(s) 331
Bbv12I GWGCWC 3 cut(s) 20, 645, 1479
BbvI GCAGC 4 cut(s) 17, 1045, 1346, 1565
BccI CCATC 6 cut(s) 153, 320, 589, 1038, 1229, 1666
BceAI ACGGC 3 cut(s) 116, 371, 1436
BcgI CGANNNNNNTGC 2 cut(s) 1391, 1425
BciT130I CCWGG 3 cut(s) 248, 254, 827
BcnI CCSGG 1 cut(s) 602
BcoDI GTCTC 3 cut(s) 5, 1307, 1590
BcuI ACTAGT 1 cut(s) 1162
BfaI CTAG 2 cut(s) 701, 1163
BfmI CTRYAG 2 cut(s) 787, 1019
BfoI RGCGCY 3 cut(s) 707, 821, 914
BglI GCCNNNNNGGC 2 cut(s) 54, 1575
BisI GCNGC 6 cut(s) 6, 55, 1059, 1360, 1541, 1579
BlsI GCNGC 6 cut(s) 7, 56, 1060, 1361, 1542, 1580
BmcAI AGTACT 1 cut(s) 869
Bme1390I CCNGG 4 cut(s) 248, 254, 602, 827
Bme18I GGWCC 6 cut(s) 174, 598, 1263, 1282, 1666, 1675
BmeT110I CYCGRG 2 cut(s) 629, 1706
BmgBI CACGTC 1 cut(s) 364
BmiI GGNNCC 6 cut(s) 68, 176, 377, 972, 1265, 1677
BmrFI CCNGG 4 cut(s) 248, 254, 602, 827
BmsI GCATC 2 cut(s) 1207, 1431
BmtI GCTAGC 1 cut(s) 704
BpiI GAAGAC 1 cut(s) 331
BpmI CTGGAG 2 cut(s) 923, 1070
BpuEI CTTGAG 4 cut(s) 6, 383, 482, 1585
BpuMI CCSGG 1 cut(s) 602
BsaBI GATNNNNATC 1 cut(s) 453
BsaHI GRCGYC 2 cut(s) 129, 1428
BsaJI CCNNGG 6 cut(s) 52, 246, 252, 346, 825, 1278
BsaWI WCCGGW 3 cut(s) 63, 645, 1141
BsaXI ACNNNNNCTCC 2 cut(s) 1277, 1307
Bsc4I CCNNNNNNNGG 6 cut(s) 159, 247, 253, 1093, 1248, 1547
Bse118I RCCGGY 3 cut(s) 520, 820, 1597
Bse1I ACTGG 2 cut(s) 906, 1030
Bse21I CCTNAGG 1 cut(s) 491
Bse3DI GCAATG 4 cut(s) 502, 515, 543, 1592
Bse8I GATNNNNATC 1 cut(s) 453
BseAI TCCGGA 1 cut(s) 645
BseBI CCWGG 3 cut(s) 248, 254, 827
BseDI CCNNGG 6 cut(s) 52, 246, 252, 346, 825, 1278
BseGI GGATG 9 cut(s) 102, 312, 357, 482, 1030, 1221, 1377, 1446, 1743
BseJI GATNNNNATC 1 cut(s) 453
BseLI CCNNNNNNNGG 6 cut(s) 159, 247, 253, 1093, 1248, 1547
BseMI GCAATG 4 cut(s) 502, 515, 543, 1592
BseMII CTCAG 5 cut(s) 481, 482, 545, 717, 812
BseNI ACTGG 2 cut(s) 906, 1030
BsePI GCGCGC 1 cut(s) 1467
BseRI GAGGAG 3 cut(s) 23, 86, 1451
BseX3I CGGCCG 1 cut(s) 1599
BseXI GCAGC 4 cut(s) 17, 1045, 1346, 1565
BsgI GTGCAG 1 cut(s) 1044
Bsh1236I CGCG 8 cut(s) 54, 394, 406, 1311, 1344, 1467, 1469, 1543
Bsh1285I CGRYCG 2 cut(s) 167, 1602
BshFI GGCC 6 cut(s) 57, 251, 257, 824, 1029, 1601
BsiEI CGRYCG 2 cut(s) 167, 1602
BsiHKAI GWGCWC 3 cut(s) 20, 645, 1479
BsiHKCI CYCGRG 2 cut(s) 629, 1706
BsiSI CCGG 7 cut(s) 64, 521, 601, 646, 821, 1142, 1598
BslFI GGGAC 5 cut(s) 160, 1062, 1249, 1661, 1683
BslI CCNNNNNNNGG 6 cut(s) 159, 247, 253, 1093, 1248, 1547
BsmAI GTCTC 3 cut(s) 5, 1307, 1590
BsmBI CGTCTC 2 cut(s) 5, 1590
BsmFI GGGAC 5 cut(s) 160, 1062, 1249, 1661, 1683
BsnI GGCC 6 cut(s) 57, 251, 257, 824, 1029, 1601
BsoBI CYCGRG 2 cut(s) 629, 1706
Bsp1286I GDGCHC 3 cut(s) 20, 645, 1479
Bsp13I TCCGGA 1 cut(s) 645
Bsp68I TCGCGA 1 cut(s) 1311
BspANI GGCC 6 cut(s) 57, 251, 257, 824, 1029, 1601
BspCNI CTCAG 5 cut(s) 480, 483, 546, 718, 811
BspEI TCCGGA 1 cut(s) 645
BspFNI CGCG 8 cut(s) 54, 394, 406, 1311, 1344, 1467, 1469, 1543
BspLI GGNNCC 6 cut(s) 68, 176, 377, 972, 1265, 1677
BspOI GCTAGC 1 cut(s) 704
BspPI GGATC 8 cut(s) 85, 370, 383, 597, 965, 978, 1629, 1719
BsrBI CCGCTC 1 cut(s) 169
BsrDI GCAATG 4 cut(s) 502, 515, 543, 1592
BsrFI RCCGGY 3 cut(s) 520, 820, 1597
BsrI ACTGG 2 cut(s) 906, 1030
BssAI RCCGGY 3 cut(s) 520, 820, 1597
BssECI CCNNGG 6 cut(s) 52, 246, 252, 346, 825, 1278
BssHII GCGCGC 1 cut(s) 1467
BssNI GRCGYC 2 cut(s) 129, 1428
BssT1I CCWWGG 2 cut(s) 346, 1278
Bst2UI CCWGG 3 cut(s) 248, 254, 827
Bst4CI ACNGT 1 cut(s) 788
Bst6I CTCTTC 3 cut(s) 215, 1140, 1328
BstACI GRCGYC 2 cut(s) 129, 1428
BstC8I GCNNGC 8 cut(s) 522, 702, 822, 853, 909, 1414, 1469, 1599
BstDEI CTNAG 5 cut(s) 467, 491, 554, 726, 798
BstDSI CCRYGG 1 cut(s) 52
BstF5I GGATG 9 cut(s) 102, 312, 357, 482, 1030, 1221, 1377, 1446, 1743
BstFNI CGCG 8 cut(s) 54, 394, 406, 1311, 1344, 1467, 1469, 1543
BstH2I RGCGCY 3 cut(s) 707, 821, 914
BstHHI GCGC 9 cut(s) 386, 396, 406, 706, 820, 913, 1451, 1469, 1471
BstMAI GTCTC 3 cut(s) 5, 1307, 1590
BstMCI CGRYCG 2 cut(s) 167, 1602
BstMWI GCNNNNNNNGC 5 cut(s) 54, 904, 934, 1308, 1575
BstNI CCWGG 3 cut(s) 248, 254, 827
BstNSI RCATGY 3 cut(s) 532, 1180, 1609
BstSCI CCNGG 4 cut(s) 246, 252, 600, 825
BstSFI CTRYAG 2 cut(s) 787, 1019
BstUI CGCG 8 cut(s) 54, 394, 406, 1311, 1344, 1467, 1469, 1543
BstV1I GCAGC 4 cut(s) 17, 1045, 1346, 1565
BstV2I GAAGAC 1 cut(s) 331
BstX2I RGATCY 5 cut(s) 90, 375, 970, 1634, 1711
BstYI RGATCY 5 cut(s) 90, 375, 970, 1634, 1711
BstZI CGGCCG 1 cut(s) 1599
Bsu36I CCTNAGG 1 cut(s) 491
BsuRI GGCC 6 cut(s) 57, 251, 257, 824, 1029, 1601
BtgI CCRYGG 1 cut(s) 52
BtrI CACGTC 1 cut(s) 364
BtsCI GGATG 9 cut(s) 102, 312, 357, 482, 1030, 1221, 1377, 1446, 1743
BtsI GCAGTG 2 cut(s) 1061, 1444
BtsIMutI CAGTG 3 cut(s) 551, 1061, 1444
BtuMI TCGCGA 1 cut(s) 1311
Cac8I GCNNGC 8 cut(s) 522, 702, 822, 853, 909, 1414, 1469, 1599
CfoI GCGC 9 cut(s) 386, 396, 406, 706, 820, 913, 1451, 1469, 1471
Cfr10I RCCGGY 3 cut(s) 520, 820, 1597
Cfr42I CCGCGG 1 cut(s) 55
CseI GACGC 3 cut(s) 137, 395, 706
Csp6I GTAC 3 cut(s) 868, 1519, 1556
CspCI CAANNNNNGTGG 2 cut(s) 926, 961
CviAII CATG 9 cut(s) 473, 529, 917, 1054, 1177, 1472, 1606, 1615, 1639
CviQI GTAC 3 cut(s) 868, 1519, 1556
DdeI CTNAG 5 cut(s) 467, 491, 554, 726, 798
DrdI GACNNNNNNGTC 3 cut(s) 1427, 1493, 1673
DseDI GACNNNNNNGTC 3 cut(s) 1427, 1493, 1673
EaeI YGGCCR 2 cut(s) 1027, 1599
EagI CGGCCG 1 cut(s) 1599
Eam1104I CTCTTC 3 cut(s) 215, 1140, 1328
EarI CTCTTC 3 cut(s) 215, 1140, 1328
EciI GGCGGA 3 cut(s) 287, 314, 1379
Ecl136II GAGCTC 2 cut(s) 643, 1477
EclXI CGGCCG 1 cut(s) 1599
Eco130I CCWWGG 2 cut(s) 346, 1278
Eco24I GRGCYC 2 cut(s) 645, 1479
Eco47I GGWCC 6 cut(s) 174, 598, 1263, 1282, 1666, 1675
Eco47III AGCGCT 1 cut(s) 705
Eco52I CGGCCG 1 cut(s) 1599
Eco53kI GAGCTC 2 cut(s) 643, 1477
Eco57I CTGAAG 2 cut(s) 1208, 1736
Eco81I CCTNAGG 1 cut(s) 491
Eco88I CYCGRG 2 cut(s) 629, 1706
EcoICRI GAGCTC 2 cut(s) 643, 1477
EcoRII CCWGG 3 cut(s) 246, 252, 825
EcoT14I CCWWGG 2 cut(s) 346, 1278
EcoT38I GRGCYC 2 cut(s) 645, 1479
ErhI CCWWGG 2 cut(s) 346, 1278
Esp3I CGTCTC 2 cut(s) 5, 1590
FaeI CATG 9 cut(s) 476, 532, 920, 1057, 1180, 1475, 1609, 1618, 1642
FalI AAGNNNNNCTT 2 cut(s) 491, 523
FaqI GGGAC 5 cut(s) 160, 1062, 1249, 1661, 1683
FatI CATG 9 cut(s) 472, 528, 916, 1053, 1176, 1471, 1605, 1614, 1638
FauI CCCGC 4 cut(s) 161, 226, 1250, 1405
FblI GTMKAC 2 cut(s) 366, 1431
Fnu4HI GCNGC 6 cut(s) 6, 55, 1059, 1360, 1541, 1579
FokI GGATG 8 cut(s) 89, 299, 344, 489, 1017, 1208, 1364, 1453
FriOI GRGCYC 2 cut(s) 645, 1479
Fsp4HI GCNGC 6 cut(s) 6, 55, 1059, 1360, 1541, 1579
FspBI CTAG 2 cut(s) 701, 1163
GlaI GCGC 9 cut(s) 385, 395, 405, 705, 819, 912, 1450, 1468, 1470
GluI GCNGC 6 cut(s) 6, 55, 1059, 1360, 1541, 1579
GsuI CTGGAG 2 cut(s) 923, 1070
HaeII RGCGCY 3 cut(s) 707, 821, 914
HaeIII GGCC 6 cut(s) 57, 251, 257, 824, 1029, 1601
HapII CCGG 7 cut(s) 64, 521, 601, 646, 821, 1142, 1598
HgaI GACGC 3 cut(s) 137, 395, 706
HhaI GCGC 9 cut(s) 386, 396, 406, 706, 820, 913, 1451, 1469, 1471
Hin1I GRCGYC 2 cut(s) 129, 1428
Hin1II CATG 9 cut(s) 476, 532, 920, 1057, 1180, 1475, 1609, 1618, 1642
Hin6I GCGC 9 cut(s) 384, 394, 404, 704, 818, 911, 1449, 1467, 1469
HinP1I GCGC 9 cut(s) 384, 394, 404, 704, 818, 911, 1449, 1467, 1469
HincII GTYRAC 3 cut(s) 136, 367, 1432
HindII GTYRAC 3 cut(s) 136, 367, 1432
HindIII AAGCTT 3 cut(s) 926, 953, 1718
HpaII CCGG 7 cut(s) 64, 521, 601, 646, 821, 1142, 1598
HphI GGTGA 1 cut(s) 1447
Hpy166II GTNNAC 4 cut(s) 136, 367, 1432, 1611
Hpy188I TCNGA 9 cut(s) 232, 470, 585, 594, 624, 967, 1426, 1499, 1716
Hpy188III TCNNGA 9 cut(s) 490, 629, 646, 1087, 1100, 1310, 1349, 1564, 1706
Hpy8I GTNNAC 4 cut(s) 136, 367, 1432, 1611
Hpy99I CGWCG 7 cut(s) 77, 89, 131, 368, 437, 1430, 1433
HpyAV CCTTC 5 cut(s) 38, 121, 331, 343, 1396
HpyCH4III ACNGT 1 cut(s) 788
HpyCH4IV ACGT 2 cut(s) 363, 1428
HpyCH4V TGCA 3 cut(s) 937, 1061, 1444
HpyF10VI GCNNNNNNNGC 5 cut(s) 54, 904, 934, 1308, 1575
HpyF3I CTNAG 5 cut(s) 467, 491, 554, 726, 798
HpySE526I ACGT 2 cut(s) 363, 1428
Hsp92I GRCGYC 2 cut(s) 129, 1428
Hsp92II CATG 9 cut(s) 476, 532, 920, 1057, 1180, 1475, 1609, 1618, 1642
HspAI GCGC 9 cut(s) 384, 394, 404, 704, 818, 911, 1449, 1467, 1469
Kpn2I TCCGGA 1 cut(s) 645
KroI GCCGGC 3 cut(s) 520, 820, 1597
KroNI GCCGGC 3 cut(s) 522, 822, 1599
KspI CCGCGG 1 cut(s) 55
LmnI GCTCC 6 cut(s) 66, 640, 648, 648, 904, 1551
Lsp1109I GCAGC 4 cut(s) 17, 1045, 1346, 1565
LweI GCATC 2 cut(s) 1207, 1431
MaeI CTAG 2 cut(s) 701, 1163
MaeII ACGT 2 cut(s) 363, 1428
MaeIII GTNAC 5 cut(s) 388, 782, 1195, 1336, 1453
MbiI CCGCTC 1 cut(s) 169
MflI RGATCY 5 cut(s) 90, 375, 970, 1634, 1711
MhlI GDGCHC 3 cut(s) 20, 645, 1479
MlsI TGGCCA 1 cut(s) 1029
MluCI AATT 8 cut(s) 260, 561, 576, 667, 940, 1135, 1331, 1522
MluNI TGGCCA 1 cut(s) 1029
MlyI GAGTC 6 cut(s) 299, 362, 737, 1361, 1415, 1427
MmeI TCCRAC 2 cut(s) 602, 1449
Mox20I TGGCCA 1 cut(s) 1029
MroI TCCGGA 1 cut(s) 645
MroNI GCCGGC 3 cut(s) 520, 820, 1597
MscI TGGCCA 1 cut(s) 1029
MseI TTAA 7 cut(s) 810, 857, 930, 990, 1154, 1572, 1722
MslI CAYNNNNRTG 2 cut(s) 477, 1506
Msp20I TGGCCA 1 cut(s) 1029
MspA1I CMGCKG 1 cut(s) 54
MspI CCGG 7 cut(s) 64, 521, 601, 646, 821, 1142, 1598
MspR9I CCNGG 4 cut(s) 248, 254, 602, 827
MvaI CCWGG 3 cut(s) 248, 254, 827
MvnI CGCG 8 cut(s) 54, 394, 406, 1311, 1344, 1467, 1469, 1543
MwoI GCNNNNNNNGC 5 cut(s) 54, 904, 934, 1308, 1575
NaeI GCCGGC 3 cut(s) 522, 822, 1599
NciI CCSGG 1 cut(s) 602
NgoMIV GCCGGC 3 cut(s) 520, 820, 1597
NheI GCTAGC 1 cut(s) 700
NlaIII CATG 9 cut(s) 476, 532, 920, 1057, 1180, 1475, 1609, 1618, 1642
NlaIV GGNNCC 6 cut(s) 68, 176, 377, 972, 1265, 1677
NmuCI GTSAC 4 cut(s) 388, 782, 1336, 1453
NruI TCGCGA 1 cut(s) 1311
NspI RCATGY 3 cut(s) 532, 1180, 1609
PaeR7I CTCGAG 2 cut(s) 629, 1706
PauI GCGCGC 1 cut(s) 1467
PciI ACATGT 2 cut(s) 528, 1605
PcsI WCGNNNNNNNCGW 5 cut(s) 81, 273, 1332, 1341, 1425
PdiI GCCGGC 3 cut(s) 522, 822, 1599
PfeI GAWTC 4 cut(s) 227, 541, 625, 1618
PflFI GACNNNGTC 2 cut(s) 131, 275
PflMI CCANNNNNTGG 1 cut(s) 1093
PfoI TCCNGGA 1 cut(s) 600
PkrI GCNGC 6 cut(s) 7, 56, 1060, 1361, 1542, 1580
PleI GAGTC 6 cut(s) 299, 362, 736, 1361, 1415, 1427
PpsI GAGTC 6 cut(s) 299, 362, 736, 1361, 1415, 1427
PscI ACATGT 2 cut(s) 528, 1605
Psp124BI GAGCTC 2 cut(s) 645, 1479
Psp6I CCWGG 3 cut(s) 246, 252, 825
PspGI CCWGG 3 cut(s) 246, 252, 825
PspN4I GGNNCC 6 cut(s) 68, 176, 377, 972, 1265, 1677
PsrI GAACNNNNNNTAC 2 cut(s) 185, 217
PsuI RGATCY 5 cut(s) 90, 375, 970, 1634, 1711
PsyI GACNNNGTC 2 cut(s) 131, 275
PteI GCGCGC 1 cut(s) 1467
RruI TCGCGA 1 cut(s) 1311
RsaI GTAC 3 cut(s) 869, 1520, 1557
RsaNI GTAC 3 cut(s) 868, 1519, 1556
RseI CAYNNNNRTG 2 cut(s) 477, 1506
SacI GAGCTC 2 cut(s) 645, 1479
SacII CCGCGG 1 cut(s) 55
SalI GTCGAC 2 cut(s) 365, 1430
SaqAI TTAA 7 cut(s) 810, 857, 930, 990, 1154, 1572, 1722
SatI GCNGC 6 cut(s) 6, 55, 1059, 1360, 1541, 1579
ScaI AGTACT 1 cut(s) 869
SchI GAGTC 6 cut(s) 299, 362, 737, 1361, 1415, 1427
ScrFI CCNGG 4 cut(s) 248, 254, 602, 827
SduI GDGCHC 3 cut(s) 20, 645, 1479
SfaNI GCATC 2 cut(s) 1207, 1431
SfcI CTRYAG 2 cut(s) 787, 1019
Sfr274I CTCGAG 2 cut(s) 629, 1706
Sfr303I CCGCGG 1 cut(s) 55
SgrBI CCGCGG 1 cut(s) 55
SinI GGWCC 6 cut(s) 174, 598, 1263, 1282, 1666, 1675
SlaI CTCGAG 2 cut(s) 629, 1706
SmiMI CAYNNNNRTG 2 cut(s) 477, 1506
SmlI CTYRAG 6 cut(s) 21, 398, 497, 629, 1564, 1706
SmoI CTYRAG 6 cut(s) 21, 398, 497, 629, 1564, 1706
SpeI ACTAGT 1 cut(s) 1162
Sse9I AATT 8 cut(s) 260, 561, 576, 667, 940, 1135, 1331, 1522
SspMI CTAG 2 cut(s) 701, 1163
SstI GAGCTC 2 cut(s) 645, 1479
StyD4I CCNGG 4 cut(s) 246, 252, 600, 825
StyI CCWWGG 2 cut(s) 346, 1278
TaaI ACNGT 1 cut(s) 788
TaiI ACGT 2 cut(s) 366, 1431
TasI AATT 8 cut(s) 260, 561, 576, 667, 940, 1135, 1331, 1522
TatI WGTACW 2 cut(s) 867, 1518
TauI GCSGC 2 cut(s) 57, 1543
TfiI GAWTC 4 cut(s) 227, 541, 625, 1618
Tru1I TTAA 7 cut(s) 810, 857, 930, 990, 1154, 1572, 1722
Tru9I TTAA 7 cut(s) 810, 857, 930, 990, 1154, 1572, 1722
TscAI CASTG 3 cut(s) 558, 1068, 1451
TseFI GTSAC 4 cut(s) 388, 782, 1336, 1453
TseI GCWGC 4 cut(s) 5, 1058, 1359, 1578
Tsp45I GTSAC 4 cut(s) 388, 782, 1336, 1453
TspDTI ATGAA 8 cut(s) 418, 443, 554, 828, 1136, 1173, 1366, 1631
TspGWI ACGGA 3 cut(s) 602, 1362, 1679
TspRI CASTG 3 cut(s) 558, 1068, 1451
Tth111I GACNNNGTC 2 cut(s) 131, 275
Van91I CCANNNNNTGG 1 cut(s) 1093
VpaK11BI GGWCC 6 cut(s) 174, 598, 1263, 1282, 1666, 1675
XapI RAATTY 3 cut(s) 667, 1135, 1331
XceI RCATGY 3 cut(s) 532, 1180, 1609
XhoI CTCGAG 2 cut(s) 629, 1706
XmiI GTMKAC 2 cut(s) 366, 1431
XspI CTAG 2 cut(s) 701, 1163
ZraI GACGTC 1 cut(s) 1429
ZrmI AGTACT 1 cut(s) 869
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.