Rw2G045610

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0000349
Physical Location & Seq
Forward (+)
72614822 .. 72617671
2850 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G045610.1

Sequence Viewer

Length: 1422 bp
ATGGCAGCAGAGACGAGCACTCAAGTCCTTCTCCTCCACGCCAAACGCCTCCGCGGCCCTAACCGGAGTCTCAACGACCTCCCCGACGAGATCCTCCTCCACATCCTCTCCTTCCTCCCCACCCTCGACGCCGTCAACACCTCTCTCATCTCCCGCAGATGGCGACCCCTCTGGTCCCTCGTTCCCTCCTTGAACTTCTCCTACCACCTCTTCCCTCCCGCCCCCCAATCCGATCTCAACCCGACCCAGGACCAGCCCCAATTCTTCGCCGACTTCATCGATCGCGCTCTCATTCTCCGCCCCGACTCCCCCATCCAAACCTTCCGCCTCTCCTTCATCTTCCACCAAGGCTACCACGTCCACGTCGACTCTTGGATCCGCTGCGCCGTCACGCGCCTCAAGGCGCGTCAGCTCCACCTCGACTTCTTCATCGACGATAACTACCACGACGGAGACACCTGGCTTTATGATTTTCATCTCTCGTTGCTCAGACATGGATGCGTAGAAGTCTTGAGGCTCACGCGTTGCTTCGTCACATTGCCGGCGAACATGTCCGCCATGAATCTCTGCTCGCTGAGGTCAATTTTTATCGAACGGATTGATCTGACGGATGAGATGGTCCGGGATTTGATTTCGGGGTGTCCGAATCTCGAGGACTTGGAGCTTAGAAGCTGTGTAGGGTTGAAGAATTTGAATATATGTAGCAGTAGGATTAAGAAGCTAGCGCTTGGGTATGATTATGATAGTGAGTCCAAGCAGAGCATTGAGATTGATTGCCCGAATCTTTGTTCGTTGATTTTTAGTGACTGTAGTTCTGCTCAGTTTGTGCTTAAGGAAGCGCCGGCCCTGGTTGAGTTTCGTGTTGATTTTGCTTGCTTAACTGATAAGTACTTTGATTTGTGGAGTAAGATTGTGAGGCTACTGGAGCAAGCGCCTCATGTTGAGAAGCTTAATGTGCCAAATTGGTGGTATAAGCTTCTAATATCAGAGGATCCTTTCCCAAAAGATTTTAAGCTCAATAATCTCAACCATTTAGAGCTACGGACTGGCCATACTCAATATGATCTGGTTGGCATGGCTGCACTGCTTAAACTTTGTCCCAATCTCCAGACAATGGTTCTTGATTACCTTGACACGATGAAAGAAGATGAGGGTTTACCAGAAGAGTTCCCAAACAAATCAGTTCAATTCAAAATCCCAAGACTCAAGCAAGTTACGATGAAATGTTATTCTGGAAGAGACGATCAACGTAATTTTGTGACTATCTTGAAAATGCAAAGAGTGGTCTTGCAAAAGATTGTACGTGTTCCCTCTCGGCATGGTGAAGAGAACATTGTAATTTTCCTGTCAAAGGTTAAACCATTTATATCCTCCGATAGTTGCATGTTGAAACTTGAATTCCTCTTAAGTGTGTTTGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBD KIX_2

Protein Analysis

473

Amino Acids

54.71

Weight (kDa)

6.4

Isoelectric Point (pI)

50.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 24 - 62 1.8e-09 F-box domain
F-box-like PF12937 24 - 55 2.2e-08 F-box-like
LRR_At1g61320_AtMIF1 PF23622 107 - 407 8.1e-22 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 158 - 270 1.6e-09 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000349)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G43415
fragaria_vesca FvH4_1g28610 FvH4_6g43940 FvH4_6g43940 FvH4_6g43940 FvH4_6g43950 FvH4_6g43960 FvH4_6g43970 FvH4_6g43990 FvH4_6g44000 FvH4_7g14510
malus_domestica MD09G1101800.v1.1 MD17G1089200.v1.1 MD17G1089300.v1.1 MD17G1089400.v1.1 MD17G1089500.v1.1 MD17G1089600.v1.1
prunus_persica Prupe.3G223900_v2.0.a1 Prupe.3G223900_v2.0.a1 Prupe.3G224000_v2.0.a1 Prupe.3G224100_v2.0.a1 Prupe.3G224200_v2.0.a1
pyrus_communis pycom09g02550 pycom17g02610 pycom17g08610 pycom17g08620 pycom17g08630 pycom17g08640 pycom17g08670
rosa_chinensis RchiOBHm_Chr2g0160711 RchiOBHm_Chr2g0160721 RchiOBHm_Chr2g0160731 RchiOBHm_Chr2g0160741 RchiOBHm_Chr4g0433831 RchiOBHm_Chr7g0197991
rosa_laevigata RLG00000001614 RLG00000002340 RLG00000003895 RLG00000005223 RLG00000021235 RLG00000021236 RLG00000021237 RLG00000021238 RLG00000028664 RLG00000029542 RLG00000029654 RLG00000035034
rosa_multiflora Rmu_co8177938.1_g000001 Rmu_co8474907.1_g000002 Rmu_sc0000064.1_g000011 Rmu_sc0000221.1_g000038 Rmu_sc0002773.1_g000001 Rmu_sc0002773.1_g000004 Rmu_sc0002773.1_g000006 Rmu_sc0002773.1_g000008 Rmu_sc0003465.1_g000005 Rmu_sc0006325.1_g000010 Rmu_sc0024525.1_g000002 Rmu_sc0030848.1_g000001 Rmu_sc0030848.1_g000002 Rmu_sc0030848.1_g000004
rosa_roxburghii Rroxscaffold_2G00089410 Rroxscaffold_2G00089420 Rroxscaffold_2G00089430 Rroxscaffold_2G00089450 Rroxscaffold_2G00089460 Rroxscaffold_3G00258030 Rroxscaffold_5G00351500
rosa_rugosa Rorug02G0485200 Rorug02G0485400 Rorug02G0485500 Rorug02G0485600 Rorug06G0149200
rosa_samantha Rh1AG011000 Rh2AG501800 Rh2AG550200 Rh2AG550300 Rh2AG550400 Rh2AG550500 Rh2BG217000 Rh2BG564800 Rh2BG564900 Rh2BG565000 Rh2BG565100 Rh2BG607100 Rh2CG487700 Rh2CG534600 Rh2CG534700 Rh2CG534800 Rh2CG534900 Rh2DG573500 Rh2DG573600 Rh2DG574000 Rh2DG574100 Rh3CG290600 Rh7AG168600 Rh7BG171600 Rh7BG171700 Rh7CG178100 Rh7DG170700 Rh7DG170900
rosa_wichuraiana Rw2G022070 Rw2G045590 Rw2G045600 Rw2G045610 Rw2G045620 Rw3G021600 Rw7G014730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1114
AccI GTMKAC 1 cut(s) 366
AccII CGCG 5 cut(s) 54, 285, 394, 406, 523
AciI CCGC 8 cut(s) 52, 54, 154, 219, 298, 325, 379, 555
AclWI GGATC 5 cut(s) 85, 370, 383, 986, 999
AcoI YGGCCR 1 cut(s) 1048
AcsI RAATTY 2 cut(s) 688, 1397
AcyI GRCGYC 1 cut(s) 129
AfaI GTAC 2 cut(s) 890, 1302
AfeI AGCGCT 1 cut(s) 726
AfiI CCNNNNNNNGG 4 cut(s) 159, 247, 1114, 1351
AflII CTTAAG 2 cut(s) 830, 1405
AflIII ACRYGT 3 cut(s) 521, 549, 1303
AgsI TTSAA 8 cut(s) 193, 685, 694, 1187, 1192, 1270, 1390, 1397
AjiI CACGTC 2 cut(s) 358, 364
AjnI CCWGG 3 cut(s) 246, 458, 846
AluBI AGCT 8 cut(s) 412, 664, 672, 721, 949, 976, 1015, 1039
AluI AGCT 8 cut(s) 412, 664, 672, 721, 949, 976, 1015, 1039
Alw21I GWGCWC 1 cut(s) 20
Alw26I GTCTC 4 cut(s) 5, 74, 447, 1233
AlwI GGATC 5 cut(s) 85, 370, 383, 986, 999
Ama87I CYCGRG 1 cut(s) 650
Aor51HI AGCGCT 1 cut(s) 726
AoxI GGCC 3 cut(s) 55, 843, 1048
ApeKI GCWGC 3 cut(s) 5, 381, 1079
ApoI RAATTY 2 cut(s) 688, 1397
AspLEI GCGC 7 cut(s) 287, 386, 396, 406, 727, 841, 934
AspS9I GGNCC 5 cut(s) 56, 174, 250, 619, 844
AsuC2I CCSGG 1 cut(s) 623
AsuHPI GGTGA 1 cut(s) 1334
AsuNHI GCTAGC 1 cut(s) 721
AvaI CYCGRG 1 cut(s) 650
AvaII GGWCC 3 cut(s) 174, 250, 619
BalI TGGCCA 1 cut(s) 1050
BamHI GGATCC 2 cut(s) 375, 991
Bbv12I GWGCWC 1 cut(s) 20
BbvCI CCTCAGC 1 cut(s) 575
BbvI GCAGC 3 cut(s) 17, 368, 1066
BccI CCATC 3 cut(s) 153, 320, 610
BceAI ACGGC 2 cut(s) 116, 371
BciT130I CCWGG 3 cut(s) 248, 460, 848
BcnI CCSGG 1 cut(s) 623
BcoDI GTCTC 4 cut(s) 5, 74, 447, 1233
BfaI CTAG 1 cut(s) 722
BfmI CTRYAG 1 cut(s) 808
BfoI RGCGCY 3 cut(s) 728, 842, 935
BfrI CTTAAG 2 cut(s) 830, 1405
BglI GCCNNNNNGGC 1 cut(s) 54
BisI GCNGC 4 cut(s) 6, 55, 382, 1080
BlsI GCNGC 4 cut(s) 7, 56, 383, 1081
BmcAI AGTACT 1 cut(s) 890
Bme1390I CCNGG 4 cut(s) 248, 460, 623, 848
Bme18I GGWCC 3 cut(s) 174, 250, 619
BmeT110I CYCGRG 1 cut(s) 650
BmgBI CACGTC 2 cut(s) 358, 364
BmgT120I GGNCC 5 cut(s) 56, 174, 250, 619, 844
BmiI GGNNCC 3 cut(s) 176, 377, 993
BmrFI CCNGG 4 cut(s) 248, 460, 623, 848
BmsI GCATC 1 cut(s) 488
BmtI GCTAGC 1 cut(s) 725
BpmI CTGGAG 2 cut(s) 944, 1091
Bpu10I CCTNAGC 1 cut(s) 575
BpuEI CTTGAG 4 cut(s) 6, 383, 532, 1190
BpuMI CCSGG 1 cut(s) 623
Bsa29I ATCGAT 1 cut(s) 279
BsaAI YACGTR 1 cut(s) 1304
BsaBI GATNNNNATC 1 cut(s) 474
BsaHI GRCGYC 1 cut(s) 129
BsaJI CCNNGG 4 cut(s) 52, 246, 346, 846
BsaWI WCCGGW 1 cut(s) 63
BsaXI ACNNNNNCTCC 2 cut(s) 92, 122
Bsc4I CCNNNNNNNGG 4 cut(s) 159, 247, 1114, 1351
Bse118I RCCGGY 2 cut(s) 541, 841
Bse1I ACTGG 2 cut(s) 927, 1051
Bse3DI GCAATG 1 cut(s) 536
Bse8I GATNNNNATC 1 cut(s) 474
BseBI CCWGG 3 cut(s) 248, 460, 848
BseCI ATCGAT 1 cut(s) 279
BseDI CCNNGG 4 cut(s) 52, 246, 346, 846
BseGI GGATG 4 cut(s) 102, 312, 503, 616
BseJI GATNNNNATC 1 cut(s) 474
BseLI CCNNNNNNNGG 4 cut(s) 159, 247, 1114, 1351
BseMI GCAATG 1 cut(s) 536
BseMII CTCAG 3 cut(s) 502, 566, 833
BseNI ACTGG 2 cut(s) 927, 1051
BseRI GAGGAG 2 cut(s) 23, 86
BseXI GCAGC 3 cut(s) 17, 368, 1066
BsgI GTGCAG 1 cut(s) 1065
Bsh1236I CGCG 5 cut(s) 54, 285, 394, 406, 523
Bsh1285I CGRYCG 1 cut(s) 283
BshFI GGCC 3 cut(s) 57, 845, 1050
BshVI ATCGAT 1 cut(s) 279
BsiEI CGRYCG 1 cut(s) 283
BsiHKAI GWGCWC 1 cut(s) 20
BsiHKCI CYCGRG 1 cut(s) 650
BsiSI CCGG 4 cut(s) 64, 542, 622, 842
BslFI GGGAC 2 cut(s) 160, 1083
BslI CCNNNNNNNGG 4 cut(s) 159, 247, 1114, 1351
BsmAI GTCTC 4 cut(s) 5, 74, 447, 1233
BsmBI CGTCTC 2 cut(s) 5, 1233
BsmFI GGGAC 2 cut(s) 160, 1083
BsnI GGCC 3 cut(s) 57, 845, 1050
BsoBI CYCGRG 1 cut(s) 650
Bsp1286I GDGCHC 1 cut(s) 20
Bsp143I GATC 8 cut(s) 90, 232, 280, 375, 601, 991, 1063, 1243
BspACI CCGC 8 cut(s) 52, 54, 154, 219, 298, 325, 379, 555
BspANI GGCC 3 cut(s) 57, 845, 1050
BspCNI CTCAG 3 cut(s) 501, 567, 832
BspDI ATCGAT 1 cut(s) 279
BspFNI CGCG 5 cut(s) 54, 285, 394, 406, 523
BspLI GGNNCC 3 cut(s) 176, 377, 993
BspOI GCTAGC 1 cut(s) 725
BspPI GGATC 5 cut(s) 85, 370, 383, 986, 999
BspTI CTTAAG 2 cut(s) 830, 1405
BsrDI GCAATG 1 cut(s) 536
BsrFI RCCGGY 2 cut(s) 541, 841
BsrI ACTGG 2 cut(s) 927, 1051
BssAI RCCGGY 2 cut(s) 541, 841
BssECI CCNNGG 4 cut(s) 52, 246, 346, 846
BssMI GATC 8 cut(s) 90, 232, 280, 375, 601, 991, 1063, 1243
BssNI GRCGYC 1 cut(s) 129
BssT1I CCWWGG 1 cut(s) 346
Bst2UI CCWGG 3 cut(s) 248, 460, 848
Bst4CI ACNGT 1 cut(s) 809
Bst6I CTCTTC 4 cut(s) 215, 1158, 1231, 1320
BstACI GRCGYC 1 cut(s) 129
BstAFI CTTAAG 2 cut(s) 830, 1405
BstBAI YACGTR 1 cut(s) 1304
BstC8I GCNNGC 6 cut(s) 543, 572, 723, 843, 874, 930
BstDEI CTNAG 4 cut(s) 488, 575, 665, 819
BstDSI CCRYGG 1 cut(s) 52
BstENI CCTNNNNNAGG 1 cut(s) 1349
BstF5I GGATG 4 cut(s) 102, 312, 503, 616
BstFNI CGCG 5 cut(s) 54, 285, 394, 406, 523
BstH2I RGCGCY 3 cut(s) 728, 842, 935
BstHHI GCGC 7 cut(s) 287, 386, 396, 406, 727, 841, 934
BstKTI GATC 8 cut(s) 93, 235, 283, 378, 604, 994, 1066, 1246
BstMAI GTCTC 4 cut(s) 5, 74, 447, 1233
BstMBI GATC 8 cut(s) 90, 232, 280, 375, 601, 991, 1063, 1243
BstMCI CGRYCG 1 cut(s) 283
BstMWI GCNNNNNNNGC 3 cut(s) 54, 925, 955
BstNI CCWGG 3 cut(s) 248, 460, 848
BstNSI RCATGY 2 cut(s) 553, 1387
BstSCI CCNGG 4 cut(s) 246, 458, 621, 846
BstSFI CTRYAG 1 cut(s) 808
BstUI CGCG 5 cut(s) 54, 285, 394, 406, 523
BstV1I GCAGC 3 cut(s) 17, 368, 1066
BstX2I RGATCY 3 cut(s) 90, 375, 991
BstXI CCANNNNNNTGG 1 cut(s) 966
BstYI RGATCY 3 cut(s) 90, 375, 991
Bsu15I ATCGAT 1 cut(s) 279
BsuRI GGCC 3 cut(s) 57, 845, 1050
BsuTUI ATCGAT 1 cut(s) 279
BtgI CCRYGG 1 cut(s) 52
BtrI CACGTC 2 cut(s) 358, 364
BtsCI GGATG 4 cut(s) 102, 312, 503, 616
BtsI GCAGTG 1 cut(s) 1082
BtsIMutI CAGTG 1 cut(s) 1082
Cac8I GCNNGC 6 cut(s) 543, 572, 723, 843, 874, 930
CfoI GCGC 7 cut(s) 287, 386, 396, 406, 727, 841, 934
Cfr10I RCCGGY 2 cut(s) 541, 841
Cfr13I GGNCC 5 cut(s) 56, 174, 250, 619, 844
Cfr42I CCGCGG 1 cut(s) 55
ClaI ATCGAT 1 cut(s) 279
CseI GACGC 2 cut(s) 137, 395
Csp6I GTAC 2 cut(s) 889, 1301
CviAII CATG 7 cut(s) 494, 550, 559, 938, 1075, 1319, 1384
CviQI GTAC 2 cut(s) 889, 1301
DdeI CTNAG 4 cut(s) 488, 575, 665, 819
DpnI GATC 8 cut(s) 92, 234, 282, 377, 603, 993, 1065, 1245
DpnII GATC 8 cut(s) 90, 232, 280, 375, 601, 991, 1063, 1243
EaeI YGGCCR 1 cut(s) 1048
Eam1104I CTCTTC 4 cut(s) 215, 1158, 1231, 1320
EarI CTCTTC 4 cut(s) 215, 1158, 1231, 1320
EciI GGCGGA 3 cut(s) 287, 314, 544
Eco130I CCWWGG 1 cut(s) 346
Eco47I GGWCC 3 cut(s) 174, 250, 619
Eco47III AGCGCT 1 cut(s) 726
Eco88I CYCGRG 1 cut(s) 650
EcoNI CCTNNNNNAGG 1 cut(s) 1349
EcoRI GAATTC 1 cut(s) 1397
EcoRII CCWGG 3 cut(s) 246, 458, 846
EcoT14I CCWWGG 1 cut(s) 346
ErhI CCWWGG 1 cut(s) 346
Esp3I CGTCTC 2 cut(s) 5, 1233
FaeI CATG 7 cut(s) 497, 553, 562, 941, 1078, 1322, 1387
FaqI GGGAC 2 cut(s) 160, 1083
FatI CATG 7 cut(s) 493, 549, 558, 937, 1074, 1318, 1383
FauI CCCGC 2 cut(s) 161, 226
FblI GTMKAC 1 cut(s) 366
Fnu4HI GCNGC 4 cut(s) 6, 55, 382, 1080
FokI GGATG 4 cut(s) 89, 299, 510, 623
Fsp4HI GCNGC 4 cut(s) 6, 55, 382, 1080
FspBI CTAG 1 cut(s) 722
GlaI GCGC 7 cut(s) 286, 385, 395, 405, 726, 840, 933
GluI GCNGC 4 cut(s) 6, 55, 382, 1080
GsuI CTGGAG 2 cut(s) 944, 1091
HaeII RGCGCY 3 cut(s) 728, 842, 935
HaeIII GGCC 3 cut(s) 57, 845, 1050
HapII CCGG 4 cut(s) 64, 542, 622, 842
HgaI GACGC 2 cut(s) 137, 395
HhaI GCGC 7 cut(s) 287, 386, 396, 406, 727, 841, 934
Hin1I GRCGYC 1 cut(s) 129
Hin1II CATG 7 cut(s) 497, 553, 562, 941, 1078, 1322, 1387
Hin6I GCGC 7 cut(s) 285, 384, 394, 404, 725, 839, 932
HinP1I GCGC 7 cut(s) 285, 384, 394, 404, 725, 839, 932
HincII GTYRAC 2 cut(s) 136, 367
HindII GTYRAC 2 cut(s) 136, 367
HindIII AAGCTT 2 cut(s) 947, 974
HinfI GANTC 8 cut(s) 67, 305, 368, 562, 646, 749, 781, 1203
HpaII CCGG 4 cut(s) 64, 542, 622, 842
HphI GGTGA 1 cut(s) 1334
Hpy166II GTNNAC 4 cut(s) 136, 361, 367, 1157
Hpy188I TCNGA 6 cut(s) 232, 491, 606, 645, 988, 1375
Hpy188III TCNNGA 6 cut(s) 511, 650, 1108, 1121, 1233, 1267
Hpy8I GTNNAC 4 cut(s) 136, 361, 367, 1157
Hpy99I CGWCG 5 cut(s) 89, 131, 368, 437, 452
HpyAV CCTTC 4 cut(s) 38, 121, 331, 343
HpyCH4III ACNGT 1 cut(s) 809
HpyCH4IV ACGT 4 cut(s) 357, 363, 1249, 1303
HpyCH4V TGCA 4 cut(s) 1082, 1276, 1291, 1383
HpyF10VI GCNNNNNNNGC 3 cut(s) 54, 925, 955
HpyF3I CTNAG 4 cut(s) 488, 575, 665, 819
HpySE526I ACGT 4 cut(s) 357, 363, 1249, 1303
Hsp92I GRCGYC 1 cut(s) 129
Hsp92II CATG 7 cut(s) 497, 553, 562, 941, 1078, 1322, 1387
HspAI GCGC 7 cut(s) 285, 384, 394, 404, 725, 839, 932
KroI GCCGGC 2 cut(s) 541, 841
KroNI GCCGGC 2 cut(s) 543, 843
KspI CCGCGG 1 cut(s) 55
Kzo9I GATC 8 cut(s) 90, 232, 280, 375, 601, 991, 1063, 1243
LmnI GCTCC 3 cut(s) 417, 661, 925
Lsp1109I GCAGC 3 cut(s) 17, 368, 1066
LweI GCATC 1 cut(s) 488
MaeI CTAG 1 cut(s) 722
MaeII ACGT 4 cut(s) 357, 363, 1249, 1303
MaeIII GTNAC 5 cut(s) 388, 532, 803, 1213, 1258
MalI GATC 8 cut(s) 92, 234, 282, 377, 603, 993, 1065, 1245
MboI GATC 8 cut(s) 90, 232, 280, 375, 601, 991, 1063, 1243
MboII GAAGA 9 cut(s) 202, 256, 331, 418, 697, 1157, 1175, 1248, 1337
MflI RGATCY 3 cut(s) 90, 375, 991
MhlI GDGCHC 1 cut(s) 20
MlsI TGGCCA 1 cut(s) 1050
MluCI AATT 8 cut(s) 260, 582, 688, 961, 1187, 1252, 1338, 1397
MluI ACGCGT 1 cut(s) 521
MluNI TGGCCA 1 cut(s) 1050
MlyI GAGTC 5 cut(s) 76, 299, 362, 758, 1197
Mox20I TGGCCA 1 cut(s) 1050
MroNI GCCGGC 2 cut(s) 541, 841
MscI TGGCCA 1 cut(s) 1050
MseI TTAA 8 cut(s) 714, 831, 878, 951, 1011, 1089, 1356, 1406
Msp20I TGGCCA 1 cut(s) 1050
MspA1I CMGCKG 2 cut(s) 54, 381
MspCI CTTAAG 2 cut(s) 830, 1405
MspI CCGG 4 cut(s) 64, 542, 622, 842
MspR9I CCNGG 4 cut(s) 248, 460, 623, 848
MvaI CCWGG 3 cut(s) 248, 460, 848
MvnI CGCG 5 cut(s) 54, 285, 394, 406, 523
MwoI GCNNNNNNNGC 3 cut(s) 54, 925, 955
NaeI GCCGGC 2 cut(s) 543, 843
NciI CCSGG 1 cut(s) 623
NdeII GATC 8 cut(s) 90, 232, 280, 375, 601, 991, 1063, 1243
NgoMIV GCCGGC 2 cut(s) 541, 841
NheI GCTAGC 1 cut(s) 721
NlaIII CATG 7 cut(s) 497, 553, 562, 941, 1078, 1322, 1387
NlaIV GGNNCC 3 cut(s) 176, 377, 993
NmeAIII GCCGAG 1 cut(s) 1294
NmuCI GTSAC 4 cut(s) 388, 532, 803, 1258
NspI RCATGY 2 cut(s) 553, 1387
PaeR7I CTCGAG 1 cut(s) 650
PciI ACATGT 1 cut(s) 549
PcsI WCGNNNNNNNCGW 3 cut(s) 81, 363, 641
PdiI GCCGGC 2 cut(s) 543, 843
PfeI GAWTC 3 cut(s) 562, 646, 781
PflFI GACNNNGTC 1 cut(s) 131
PflMI CCANNNNNTGG 1 cut(s) 1114
PfoI TCCNGGA 1 cut(s) 621
PkrI GCNGC 4 cut(s) 7, 56, 383, 1081
Ple19I CGATCG 1 cut(s) 283
PleI GAGTC 5 cut(s) 75, 299, 362, 757, 1197
PpsI GAGTC 5 cut(s) 75, 299, 362, 757, 1197
Ppu21I YACGTR 1 cut(s) 1304
PscI ACATGT 1 cut(s) 549
Psp6I CCWGG 3 cut(s) 246, 458, 846
PspGI CCWGG 3 cut(s) 246, 458, 846
PspN4I GGNNCC 3 cut(s) 176, 377, 993
PspPI GGNCC 5 cut(s) 56, 174, 250, 619, 844
PsrI GAACNNNNNNTAC 2 cut(s) 185, 217
PsuI RGATCY 3 cut(s) 90, 375, 991
PsyI GACNNNGTC 1 cut(s) 131
PvuI CGATCG 1 cut(s) 283
RsaI GTAC 2 cut(s) 890, 1302
RsaNI GTAC 2 cut(s) 889, 1301
SacII CCGCGG 1 cut(s) 55
SalI GTCGAC 1 cut(s) 365
SaqAI TTAA 8 cut(s) 714, 831, 878, 951, 1011, 1089, 1356, 1406
SatI GCNGC 4 cut(s) 6, 55, 382, 1080
Sau3AI GATC 8 cut(s) 90, 232, 280, 375, 601, 991, 1063, 1243
Sau96I GGNCC 5 cut(s) 56, 174, 250, 619, 844
ScaI AGTACT 1 cut(s) 890
SchI GAGTC 5 cut(s) 76, 299, 362, 758, 1197
ScrFI CCNGG 4 cut(s) 248, 460, 623, 848
SduI GDGCHC 1 cut(s) 20
SfaNI GCATC 1 cut(s) 488
SfcI CTRYAG 1 cut(s) 808
Sfr274I CTCGAG 1 cut(s) 650
Sfr303I CCGCGG 1 cut(s) 55
SgrBI CCGCGG 1 cut(s) 55
SinI GGWCC 3 cut(s) 174, 250, 619
SlaI CTCGAG 1 cut(s) 650
SmlI CTYRAG 7 cut(s) 21, 398, 511, 650, 830, 1205, 1405
SmoI CTYRAG 7 cut(s) 21, 398, 511, 650, 830, 1205, 1405
Sse9I AATT 8 cut(s) 260, 582, 688, 961, 1187, 1252, 1338, 1397
SsiI CCGC 8 cut(s) 52, 54, 154, 219, 298, 325, 379, 555
SspMI CTAG 1 cut(s) 722
StyD4I CCNGG 4 cut(s) 246, 458, 621, 846
StyI CCWWGG 1 cut(s) 346
TaaI ACNGT 1 cut(s) 809
TaiI ACGT 4 cut(s) 360, 366, 1252, 1306
TaqI TCGA 7 cut(s) 126, 279, 366, 420, 432, 591, 651
TasI AATT 8 cut(s) 260, 582, 688, 961, 1187, 1252, 1338, 1397
TatI WGTACW 1 cut(s) 888
TauI GCSGC 1 cut(s) 57
TfiI GAWTC 3 cut(s) 562, 646, 781
Tru1I TTAA 8 cut(s) 714, 831, 878, 951, 1011, 1089, 1356, 1406
Tru9I TTAA 8 cut(s) 714, 831, 878, 951, 1011, 1089, 1356, 1406
TscAI CASTG 1 cut(s) 1089
TseFI GTSAC 4 cut(s) 388, 532, 803, 1258
TseI GCWGC 3 cut(s) 5, 381, 1079
Tsp45I GTSAC 4 cut(s) 388, 532, 803, 1258
TspDTI ATGAA 7 cut(s) 265, 325, 418, 464, 575, 1154, 1235
TspGWI ACGGA 4 cut(s) 465, 610, 623, 1057
TspRI CASTG 1 cut(s) 1089
Tth111I GACNNNGTC 1 cut(s) 131
Van91I CCANNNNNTGG 1 cut(s) 1114
Vha464I CTTAAG 2 cut(s) 830, 1405
VpaK11BI GGWCC 3 cut(s) 174, 250, 619
XagI CCTNNNNNAGG 1 cut(s) 1349
XapI RAATTY 2 cut(s) 688, 1397
XceI RCATGY 2 cut(s) 553, 1387
XhoI CTCGAG 1 cut(s) 650
XmiI GTMKAC 1 cut(s) 366
XspI CTAG 1 cut(s) 722
ZrmI AGTACT 1 cut(s) 890
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.