Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0000571

Physical Location & Seq

Genomic Coordinates Reverse (-)

6054759 .. 6057755

Gene Structure 2997 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g07360.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1944 bp

ATGTATCTGAACAATGAAACCTCTCGAGTCAAAAACCCTCTAGTTTCGCAAAATCAAGTCTCAGCCAGAACAATGAAACCTCACAGACTCCTAAACCCTCACACTCTTAAACCCCAGAACCTCAGATCTCCTTTCTCCTCACTAACCCAACCCTCCCCTCCTCCTCCTCCTCCGCCCATTACCCACCTCTCCCTCCTCAACTCCATCCAAACCTCTCACTGGCATTTCATCCAACACCTCCCACCCAACCTCCCATCCTCTCTAGTCTCCCAAACCCTCTTCTCCCTCCACCAAACCCCTCACCTCGTCCACCGCTTCACCTCCCATTTCGACCTCCGCCGCCTCGACACCGACACCCAATGCCTCGCCGCCGCCATCCTCGCCGCCCTCCCCTCCCCAAAACCCTCCATCGCTCTCCTCAAGCAGCTCCTCGGCTCCGGCATTGCTCCAATTCGAGACGTCTTCGACTCGCTGGCTAAAGCCCGAACGCGCCTGGGTGCGCAGAGCGGCGTCGTTTTGGACCTCCTGGTGAGTGCTTGCTGTGAATTGAAGAGAGCTGATGAGGGTTTTCAATGCTTTAGGTCGATGACGAGTGCGAATGTGATGCCGAAAACCAGGACTTGTAATGAGCTGTTGAGCTTGTTTTCGAAGATGAATCGGACCGAGACGGCGTGGGTTTTGTATGCTGAGATGTTTAGGTTGAAGATCAAGTCGAGTGTTTGTACTTTTAATATTATGATCAATGTGTTGTGTAAAGAAGGGAAGCTGAAGAAGGCCAAGGAGTTTCTCGGGTTGATGGAGCTTTTGGGGGTTAAGCCGAGTGTTGTTACTTATAATACTATCATTCATGGGTTTTGTGTGAGAGGGAGAGTTGGAGGGGCTCAGTTGATTTTGAGTGATATGAAAGGGAGAGGAGTTAAGCCGGATTCGTACACCTATGGATTGCTTATTAGTGGGATGTGTAAGGAGAGAAGGCTTGACGAGGCGTCTGGTCTTTTTGATAAAATGCTGGAAATTGGGCTGGTTCCGAGTGCTGTGACTTATAACATTCTGATTGATGGTTATTGCAATAAGGGTGATCTGGACAGGGCTTTTGGTTATAGAGATGAGATGGTGAAGAAGGGTATCATGCCGACTGTGTTGACTTACAATTTGTTGATTCATGAGTTGTTTATGGAAGGTAGGGTGAGCGAAGCTGAGGGTATGGTTAGAGAGATGGAAGAGAAAGGGATGGCTCCTGATGCCATTACCTATAATATTTTGATTAATGGGTACTGCAGGTCTGGCAATGCGAAGAAGGCGTTTATCCTTCGCGATGAAATGTTGAGTAAAGAGATAGAGCCTACTAAGGAAACTTATACGTCACTTATTTATGTTTTGAGTAAAAGGAATAGGATGAATGAGGCAGATGACTTGTTTGAGAAGATACAGCGTAAGGATGTTCTGCCGGATCTTGTGATGTTCAATGCTTTGATTGATGGTCATTGTGCTAATGGTAATATGGAGCGTGCATTTTCGCTTTTGAGTGAGATGGATAAAATGAAGGTTCATCCAGATGAAGTGACTTACAATACCCTAATGCAAGGCCGCTGCAGGGAAGGGAAAGTTGAGGAAGCTCGGGAACTTCTGGATGAGATGAAGAGAAGGGGAATCAAGCCTGATTTCATTAGTTACAACACCCTCATTAGTGGACATAGTAAACGAGGTGATATGAATGATGCCTTCAAAGTTCGAGATGAGATGTTGAGTATAGGTTTCAATCCTACACTTCTAACGTACAATGCTCTTATCAAAGGTCTATGCAAAAACCAAAACGGTGATGTTGCTCAAGAGCTCCTTAAAGAGATGGTGAGCAGAGGGATTACTCCTGATGACAACACATATTATTATCTGATCGAGGGGATTGAGAATGTTGAGGAATTTCTCAAAAAGGGTGAGTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3 PPR_long

Protein Analysis

648

Amino Acids

72.87

Weight (kDa)

8.65

Isoelectric Point (pI)

34.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	203 - 252	1.3e-10	PPR repeat family
PPR_3	PF13812	227 - 283	5.1e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	237 - 267	1.4e-08	PPR repeat
PPR_2	PF13041	239 - 286	7.9e-15	PPR repeat family
PPR	PF01535	242 - 271	2.5e-06	PPR repeat
PPR_1	PF12854	270 - 302	5e-10	PPR repeat
PPR_2	PF13041	273 - 322	2.2e-17	PPR repeat family
PPR_3	PF13812	297 - 353	3.8e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	304 - 336	1.1e-11	PPR repeat
PPR	PF01535	311 - 341	8.5e-07	PPR repeat
PPR_2	PF13041	314 - 357	5.8e-13	PPR repeat family
PPR_1	PF12854	340 - 372	4.1e-12	PPR repeat
PPR_2	PF13041	343 - 390	4e-16	PPR repeat family
PPR	PF01535	346 - 376	4.7e-09	PPR repeat
PPR_3	PF13812	346 - 387	4e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	374 - 407	3.5e-08	PPR repeat
PPR_2	PF13041	378 - 427	6.7e-16	PPR repeat family
PPR_long	PF17177	397 - 459	8.4e-07	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	403 - 462	4e-09	Pentatricopeptide repeat domain
TPR_24	PF23276	404 - 478	8.9e-06	Fungal tetratrico peptide repeats
PPR_1	PF12854	409 - 441	1.6e-12	PPR repeat
PPR_2	PF13041	413 - 461	5.1e-15	PPR repeat family
PPR	PF01535	416 - 445	8.7e-08	PPR repeat
PPR_long	PF17177	440 - 537	2.1e-08	Pentacotripeptide-repeat region of PRORP
PPR_long	PF17177	462 - 598	5.2e-10	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	472 - 528	1.7e-10	Pentatricopeptide repeat domain
TPR_24	PF23276	477 - 577	8.8e-09	Fungal tetratrico peptide repeats
PPR_1	PF12854	480 - 511	5.5e-10	PPR repeat
PPR_2	PF13041	483 - 531	1.1e-16	PPR repeat family
PPR	PF01535	486 - 515	3.8e-07	PPR repeat
PPR_1	PF12854	516 - 547	1.1e-12	PPR repeat
PPR_2	PF13041	518 - 564	1.4e-18	PPR repeat family
PPR	PF01535	521 - 551	5.6e-09	PPR repeat
PPR_long	PF17177	536 - 632	2.4e-07	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	542 - 599	8.2e-14	Pentatricopeptide repeat domain
PPR_1	PF12854	549 - 581	1e-10	PPR repeat
PPR_2	PF13041	553 - 602	8e-16	PPR repeat family
PPR	PF01535	556 - 586	4.4e-07	PPR repeat
PPR_1	PF12854	585 - 617	8.3e-09	PPR repeat
PPR_2	PF13041	588 - 634	9.5e-13	PPR repeat family
PPR	PF01535	592 - 621	3.2e-07	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0000571)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G15630
fragaria_vesca	FvH4_2g07360
malus_domestica	MD02G1234600.v1.1
prunus_persica	Prupe.8G019300_v2.0.a1
pyrus_communis	pycom02g20240 pycom05g06440 pycom10g06900
rosa_chinensis	RchiOBHm_Chr2g0106031 RchiOBHm_Chr2g0124301 RchiOBHm_Chr2g0124591 RchiOBHm_Chr5g0034701 RchiOBHm_Chr6g0257571 RchiOBHm_Chr6g0259961 RchiOBHm_Chr6g0260151 RchiOBHm_Chr6g0260161 RchiOBHm_Chr6g0260361 RchiOBHm_Chr6g0260391 RchiOBHm_Chr6g0260531 RchiOBHm_Chr6g0260541 RchiOBHm_Chr6g0260661 RchiOBHm_Chr6g0260761 RchiOBHm_Chr6g0266771 RchiOBHm_Chr7g0210581 RchiOBHm_Chr7g0225201 RchiOBHm_Chr7g0225221
rosa_laevigata	RLG00000001833 RLG00000001834 RLG00000014081 RLG00000014490 RLG00000014495 RLG00000015073 RLG00000034098
rosa_multiflora	Rmu_sc0000414.1_g000008 Rmu_sc0000546.1_g000067 Rmu_sc0000588.1_g000057 Rmu_sc0000861.1_g000058 Rmu_sc0000861.1_g000059 Rmu_sc0002766.1_g000023 Rmu_sc0002968.1_g000001 Rmu_sc0003786.1_g000024 Rmu_sc0005472.1_g000021 Rmu_sc0010278.1_g000006 Rmu_sc0014629.1_g000014 Rmu_sc0036189.1_g000001
rosa_roxburghii	Rroxscaffold_3G00234010 Rroxscaffold_5G00368980 Rroxscaffold_7G00201460 Rroxscaffold_7G00207310 Rroxscaffold_7G00207360 Rroxscaffold_7G00207370 Rroxscaffold_7G00210730
rosa_rugosa	Rorug05G0196300 Rorug05G0359600 Rorug05G0591800 Rorug05G0592300 Rorug05G0592700 Rorug06G0023500 Rorug07G0228100
rosa_samantha	Rh2CG188200 Rh2DG333800 Rh4DG026900 Rh5CG249600 Rh6BG104200 Rh6BG104500 Rh6BG105900 Rh6BG106000 Rh6CG076700 Rh6CG097500 Rh6CG098200 Rh6CG100800 Rh6CG101000 Rh6CG101200 Rh6CG102400 Rh6CG144100 Rh6DG093200 Rh7AG375200 Rh7AG375300 Rh7BG360300
rosa_wichuraiana	Rw0G020720 Rw5G026430 Rw6G009370 Rw6G009450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	834, 1044
AatII	GACGTC	1 cut(s)	462
Acc16I	TGCGCA	1 cut(s)	501
Acc36I	ACCTGC	1 cut(s)	1269
AccBSI	CCGCTC	1 cut(s)	507
AccII	CGCG	2 cut(s)	490, 1314
AciI	CCGC	9 cut(s)	173, 313, 337, 340, 369, 372, 384, 507, 1588
AclWI	GGATC	1 cut(s)	1458
AcsI	RAATTY	1 cut(s)	1919
AcuI	CTGAAG	1 cut(s)	788
AcyI	GRCGYC	3 cut(s)	459, 510, 986
AfaI	GTAC	4 cut(s)	724, 932, 1274, 1778
AfiI	CCNNNNNNNGG	2 cut(s)	219, 1594
AgsI	TTSAA	6 cut(s)	550, 572, 703, 1465, 1726, 1759
AhdI	GACNNNNNGTC	1 cut(s)	985
AjnI	CCWGG	3 cut(s)	492, 525, 614
AluBI	AGCT	9 cut(s)	427, 557, 631, 639, 766, 802, 1196, 1616, 1834
AluI	AGCT	9 cut(s)	427, 557, 631, 639, 766, 802, 1196, 1616, 1834
Alw21I	GWGCWC	1 cut(s)	1836
Alw26I	GTCTC	4 cut(s)	64, 271, 450, 659
AlwI	GGATC	1 cut(s)	1458
Ama87I	CYCGRG	3 cut(s)	24, 788, 1617
AoxI	GGCC	2 cut(s)	774, 1585
ApeKI	GCWGC	2 cut(s)	424, 1590
ApoI	RAATTY	1 cut(s)	1919
ArsI	GACNNNNNNTTYG	4 cut(s)	1076, 1108, 1135, 1167
AseI	ATTAAT	1 cut(s)	1266
AspLEI	GCGC	2 cut(s)	492, 502
AspS9I	GGNCC	2 cut(s)	520, 660
AsuHPI	GGTGA	9 cut(s)	293, 310, 541, 1088, 1126, 1198, 1718, 1829, 1861
AsuII	TTCGAA	1 cut(s)	647
AvaI	CYCGRG	3 cut(s)	24, 788, 1617
AvaII	GGWCC	2 cut(s)	520, 660
BanII	GRGCYC	2 cut(s)	883, 1836
BbsI	GAAGAC	1 cut(s)	454
Bbv12I	GWGCWC	1 cut(s)	1836
BbvCI	CCTCAGC	1 cut(s)	1197
BbvI	GCAGC	2 cut(s)	436, 1577
BceAI	ACGGC	1 cut(s)	684
BcgI	CGANNNNNNTGC	2 cut(s)	586, 620
BciT130I	CCWGG	3 cut(s)	494, 527, 616
BclI	TGATCA	1 cut(s)	738
BcoDI	GTCTC	4 cut(s)	64, 271, 450, 659
BfaI	CTAG	2 cut(s)	41, 263
BfmI	CTRYAG	2 cut(s)	1276, 1591
BfuAI	ACCTGC	1 cut(s)	1269
BglII	AGATCT	1 cut(s)	125
BisI	GCNGC	8 cut(s)	340, 369, 372, 384, 425, 508, 1588, 1591
BlsI	GCNGC	8 cut(s)	341, 370, 373, 385, 426, 509, 1589, 1592
Bme1390I	CCNGG	3 cut(s)	494, 527, 616
Bme18I	GGWCC	2 cut(s)	520, 660
BmeRI	GACNNNNNGTC	1 cut(s)	985
BmeT110I	CYCGRG	3 cut(s)	24, 788, 1617
BmgT120I	GGNCC	2 cut(s)	520, 660
BmiI	GGNNCC	3 cut(s)	436, 1026, 1236
BmrFI	CCNGG	3 cut(s)	494, 527, 616
BmsI	GCATC	3 cut(s)	594, 1231, 1708
BpiI	GAAGAC	1 cut(s)	454
Bpu10I	CCTNAGC	1 cut(s)	1197
Bpu14I	TTCGAA	1 cut(s)	647
BpuEI	CTTGAG	2 cut(s)	404, 1812
BsaHI	GRCGYC	3 cut(s)	459, 510, 986
BsaJI	CCNNGG	3 cut(s)	430, 493, 777
BsaXI	ACNNNNNCTCC	2 cut(s)	234, 264
Bsc4I	CCNNNNNNNGG	2 cut(s)	219, 1594
Bse1I	ACTGG	1 cut(s)	224
Bse3DI	GCAATG	2 cut(s)	441, 1294
BseBI	CCWGG	3 cut(s)	494, 527, 616
BseDI	CCNNGG	3 cut(s)	430, 493, 777
BseLI	CCNNNNNNNGG	2 cut(s)	219, 1594
BseMI	GCAATG	2 cut(s)	441, 1294
BseMII	CTCAG	5 cut(s)	75, 136, 678, 896, 1188
BseNI	ACTGG	1 cut(s)	224
BseRI	GAGGAG	9 cut(s)	127, 150, 153, 156, 159, 185, 407, 419, 927
BseXI	GCAGC	2 cut(s)	436, 1577
Bsh1236I	CGCG	2 cut(s)	490, 1314
BshFI	GGCC	2 cut(s)	776, 1587
BsiHKAI	GWGCWC	1 cut(s)	1836
BsiHKCI	CYCGRG	3 cut(s)	24, 788, 1617
BsiSI	CCGG	3 cut(s)	438, 923, 1448
BslI	CCNNNNNNNGG	2 cut(s)	219, 1594
BsmAI	GTCTC	4 cut(s)	64, 271, 450, 659
BsmBI	CGTCTC	2 cut(s)	450, 659
BsnI	GGCC	2 cut(s)	776, 1587
BsoBI	CYCGRG	3 cut(s)	24, 788, 1617
Bsp119I	TTCGAA	1 cut(s)	647
Bsp1286I	GDGCHC	2 cut(s)	883, 1836
Bsp143I	GATC	6 cut(s)	125, 705, 738, 1078, 1450, 1893
Bsp68I	TCGCGA	1 cut(s)	1314
BspACI	CCGC	9 cut(s)	173, 313, 337, 340, 369, 372, 384, 507, 1588
BspANI	GGCC	2 cut(s)	776, 1587
BspCNI	CTCAG	5 cut(s)	74, 135, 679, 895, 1189
BspFNI	CGCG	2 cut(s)	490, 1314
BspHI	TCATGA	2 cut(s)	1162, 1940
BspLI	GGNNCC	3 cut(s)	436, 1026, 1236
BspMAI	CTGCAG	2 cut(s)	1280, 1595
BspMI	ACCTGC	1 cut(s)	1269
BspPI	GGATC	1 cut(s)	1458
BspT104I	TTCGAA	1 cut(s)	647
BsrBI	CCGCTC	1 cut(s)	507
BsrDI	GCAATG	2 cut(s)	441, 1294
BsrI	ACTGG	1 cut(s)	224
BssECI	CCNNGG	3 cut(s)	430, 493, 777
BssMI	GATC	6 cut(s)	125, 705, 738, 1078, 1450, 1893
BssNI	GRCGYC	3 cut(s)	459, 510, 986
BssT1I	CCWWGG	1 cut(s)	777
Bst2UI	CCWGG	3 cut(s)	494, 527, 616
Bst4CI	ACNGT	2 cut(s)	1138, 1817
Bst6I	CTCTTC	4 cut(s)	284, 545, 1215, 1634
BstACI	GRCGYC	3 cut(s)	459, 510, 986
BstBI	TTCGAA	1 cut(s)	647
BstC8I	GCNNGC	3 cut(s)	474, 538, 1509
BstDEI	CTNAG	6 cut(s)	61, 122, 687, 882, 1197, 1347
BstFNI	CGCG	2 cut(s)	490, 1314
BstHHI	GCGC	2 cut(s)	492, 502
BstKTI	GATC	6 cut(s)	128, 708, 741, 1081, 1453, 1896
BstMAI	GTCTC	4 cut(s)	64, 271, 450, 659
BstMBI	GATC	6 cut(s)	125, 705, 738, 1078, 1450, 1893
BstMWI	GCNNNNNNNGC	4 cut(s)	380, 1241, 1284, 1298
BstNI	CCWGG	3 cut(s)	494, 527, 616
BstSCI	CCNGG	3 cut(s)	492, 525, 614
BstSFI	CTRYAG	2 cut(s)	1276, 1591
BstUI	CGCG	2 cut(s)	490, 1314
BstV1I	GCAGC	2 cut(s)	436, 1577
BstV2I	GAAGAC	1 cut(s)	454
BstX2I	RGATCY	2 cut(s)	125, 1450
BstYI	RGATCY	2 cut(s)	125, 1450
BsuRI	GGCC	2 cut(s)	776, 1587
BtgZI	GCGATG	2 cut(s)	394, 1329
BtsIMutI	CAGTG	1 cut(s)	217
BtuMI	TCGCGA	1 cut(s)	1314
BveI	ACCTGC	1 cut(s)	1269
Cac8I	GCNNGC	3 cut(s)	474, 538, 1509
CciI	TCATGA	2 cut(s)	1162, 1940
CfoI	GCGC	2 cut(s)	492, 502
Cfr13I	GGNCC	2 cut(s)	520, 660
CpoI	CGGWCCG	1 cut(s)	660
CseI	GACGC	2 cut(s)	499, 975
Csp6I	GTAC	4 cut(s)	723, 931, 1273, 1777
CspI	CGGWCCG	1 cut(s)	660
CviAII	CATG	4 cut(s)	848, 1129, 1163, 1941
CviQI	GTAC	4 cut(s)	723, 931, 1273, 1777
DdeI	CTNAG	6 cut(s)	61, 122, 687, 882, 1197, 1347
DpnI	GATC	6 cut(s)	127, 707, 740, 1080, 1452, 1895
DpnII	GATC	6 cut(s)	125, 705, 738, 1078, 1450, 1893
DriI	GACNNNNNGTC	1 cut(s)	985
Eam1104I	CTCTTC	4 cut(s)	284, 545, 1215, 1634
Eam1105I	GACNNNNNGTC	1 cut(s)	985
EarI	CTCTTC	4 cut(s)	284, 545, 1215, 1634
EciI	GGCGGA	2 cut(s)	162, 326
Ecl136II	GAGCTC	1 cut(s)	1834
Eco130I	CCWWGG	1 cut(s)	777
Eco24I	GRGCYC	2 cut(s)	883, 1836
Eco47I	GGWCC	2 cut(s)	520, 660
Eco53kI	GAGCTC	1 cut(s)	1834
Eco57I	CTGAAG	1 cut(s)	788
Eco88I	CYCGRG	3 cut(s)	24, 788, 1617
EcoICRI	GAGCTC	1 cut(s)	1834
EcoRII	CCWGG	3 cut(s)	492, 525, 614
EcoT14I	CCWWGG	1 cut(s)	777
EcoT38I	GRGCYC	2 cut(s)	883, 1836
ErhI	CCWWGG	1 cut(s)	777
Esp3I	CGTCTC	2 cut(s)	450, 659
FaeI	CATG	4 cut(s)	851, 1132, 1166, 1944
FalI	AAGNNNNNCTT	2 cut(s)	1821, 1853
FatI	CATG	4 cut(s)	847, 1128, 1162, 1940
FbaI	TGATCA	1 cut(s)	738
Fnu4HI	GCNGC	8 cut(s)	340, 369, 372, 384, 425, 508, 1588, 1591
FriOI	GRGCYC	2 cut(s)	883, 1836
Fsp4HI	GCNGC	8 cut(s)	340, 369, 372, 384, 425, 508, 1588, 1591
FspBI	CTAG	2 cut(s)	41, 263
FspI	TGCGCA	1 cut(s)	501
GlaI	GCGC	2 cut(s)	491, 501
GluI	GCNGC	8 cut(s)	340, 369, 372, 384, 425, 508, 1588, 1591
HaeIII	GGCC	2 cut(s)	776, 1587
HapII	CCGG	3 cut(s)	438, 923, 1448
HgaI	GACGC	2 cut(s)	499, 975
HhaI	GCGC	2 cut(s)	492, 502
Hin1I	GRCGYC	3 cut(s)	459, 510, 986
Hin1II	CATG	4 cut(s)	851, 1132, 1166, 1944
Hin6I	GCGC	2 cut(s)	490, 500
HinP1I	GCGC	2 cut(s)	490, 500
HincII	GTYRAC	1 cut(s)	1143
HindII	GTYRAC	1 cut(s)	1143
HinfI	GANTC	8 cut(s)	27, 87, 467, 655, 926, 1159, 1650, 1937
HpaII	CCGG	3 cut(s)	438, 923, 1448
HphI	GGTGA	9 cut(s)	293, 310, 541, 1088, 1126, 1198, 1718, 1829, 1861
Hpy166II	GTNNAC	5 cut(s)	310, 933, 1143, 1691, 1700
Hpy188I	TCNGA	6 cut(s)	9, 125, 660, 1029, 1053, 1893
Hpy8I	GTNNAC	5 cut(s)	310, 933, 1143, 1691, 1700
Hpy99I	CGWCG	1 cut(s)	515
HpyCH4III	ACNGT	2 cut(s)	1138, 1817
HpyCH4IV	ACGT	3 cut(s)	459, 1361, 1775
HpyCH4V	TGCA	6 cut(s)	1068, 1278, 1511, 1582, 1593, 1803
HpyF10VI	GCNNNNNNNGC	4 cut(s)	380, 1241, 1284, 1298
HpyF3I	CTNAG	6 cut(s)	61, 122, 687, 882, 1197, 1347
HpySE526I	ACGT	3 cut(s)	459, 1361, 1775
Hsp92I	GRCGYC	3 cut(s)	459, 510, 986
Hsp92II	CATG	4 cut(s)	851, 1132, 1166, 1944
HspAI	GCGC	2 cut(s)	490, 500
Ksp22I	TGATCA	1 cut(s)	738
Kzo9I	GATC	6 cut(s)	125, 705, 738, 1078, 1450, 1893
LmnI	GCTCC	7 cut(s)	432, 440, 451, 799, 1240, 1504, 1839
Lsp1109I	GCAGC	2 cut(s)	436, 1577
LweI	GCATC	3 cut(s)	594, 1231, 1708
MaeI	CTAG	2 cut(s)	41, 263
MaeII	ACGT	3 cut(s)	459, 1361, 1775
MaeIII	GTNAC	5 cut(s)	826, 1036, 1362, 1561, 1670
MalI	GATC	6 cut(s)	127, 707, 740, 1080, 1452, 1895
MbiI	CCGCTC	1 cut(s)	507
MboI	GATC	6 cut(s)	125, 705, 738, 1078, 1450, 1893
MflI	RGATCY	2 cut(s)	125, 1450
MhlI	GDGCHC	2 cut(s)	883, 1836
MluCI	AATT	5 cut(s)	450, 545, 1014, 1150, 1919
MlyI	GAGTC	3 cut(s)	36, 81, 461
MmeI	TCCRAC	2 cut(s)	256, 853
MseI	TTAA	6 cut(s)	108, 729, 813, 918, 1266, 1839
MslI	CAYNNNNRTG	1 cut(s)	1554
MspA1I	CMGCKG	1 cut(s)	1590
MspI	CCGG	3 cut(s)	438, 923, 1448
MspR9I	CCNGG	3 cut(s)	494, 527, 616
MvaI	CCWGG	3 cut(s)	494, 527, 616
MvnI	CGCG	2 cut(s)	490, 1314
MwoI	GCNNNNNNNGC	4 cut(s)	380, 1241, 1284, 1298
NdeII	GATC	6 cut(s)	125, 705, 738, 1078, 1450, 1893
NlaIII	CATG	4 cut(s)	851, 1132, 1166, 1944
NlaIV	GGNNCC	3 cut(s)	436, 1026, 1236
NmeAIII	GCCGAG	2 cut(s)	411, 843
NmuCI	GTSAC	3 cut(s)	1036, 1362, 1561
NruI	TCGCGA	1 cut(s)	1314
NsbI	TGCGCA	1 cut(s)	501
NspV	TTCGAA	1 cut(s)	647
PaeR7I	CTCGAG	1 cut(s)	24
PagI	TCATGA	2 cut(s)	1162, 1940
PfeI	GAWTC	4 cut(s)	655, 926, 1159, 1650
PkrI	GCNGC	8 cut(s)	341, 370, 373, 385, 426, 509, 1589, 1592
PleI	GAGTC	3 cut(s)	35, 81, 461
PpsI	GAGTC	3 cut(s)	35, 81, 461
PshBI	ATTAAT	1 cut(s)	1266
PsiI	TTATAA	2 cut(s)	834, 1044
Psp124BI	GAGCTC	1 cut(s)	1836
Psp6I	CCWGG	3 cut(s)	492, 525, 614
PspGI	CCWGG	3 cut(s)	492, 525, 614
PspN4I	GGNNCC	3 cut(s)	436, 1026, 1236
PspPI	GGNCC	2 cut(s)	520, 660
PstI	CTGCAG	2 cut(s)	1280, 1595
PsuI	RGATCY	2 cut(s)	125, 1450
RruI	TCGCGA	1 cut(s)	1314
RsaI	GTAC	4 cut(s)	724, 932, 1274, 1778
RsaNI	GTAC	4 cut(s)	723, 931, 1273, 1777
RseI	CAYNNNNRTG	1 cut(s)	1554
Rsr2I	CGGWCCG	1 cut(s)	660
RsrII	CGGWCCG	1 cut(s)	660
SacI	GAGCTC	1 cut(s)	1836
SaqAI	TTAA	6 cut(s)	108, 729, 813, 918, 1266, 1839
SatI	GCNGC	8 cut(s)	340, 369, 372, 384, 425, 508, 1588, 1591
Sau3AI	GATC	6 cut(s)	125, 705, 738, 1078, 1450, 1893
Sau96I	GGNCC	2 cut(s)	520, 660
SchI	GAGTC	3 cut(s)	36, 81, 461
ScrFI	CCNGG	3 cut(s)	494, 527, 616
SduI	GDGCHC	2 cut(s)	883, 1836
SfaNI	GCATC	3 cut(s)	594, 1231, 1708
SfcI	CTRYAG	2 cut(s)	1276, 1591
Sfr274I	CTCGAG	1 cut(s)	24
SfuI	TTCGAA	1 cut(s)	647
SinI	GGWCC	2 cut(s)	520, 660
SlaI	CTCGAG	1 cut(s)	24
SmiMI	CAYNNNNRTG	1 cut(s)	1554
SmlI	CTYRAG	3 cut(s)	24, 419, 1827
SmoI	CTYRAG	3 cut(s)	24, 419, 1827
Sse9I	AATT	5 cut(s)	450, 545, 1014, 1150, 1919
SsiI	CCGC	9 cut(s)	173, 313, 337, 340, 369, 372, 384, 507, 1588
SspI	AATATT	2 cut(s)	733, 1258
SspMI	CTAG	2 cut(s)	41, 263
SstI	GAGCTC	1 cut(s)	1836
StyD4I	CCNGG	3 cut(s)	492, 525, 614
StyI	CCWWGG	1 cut(s)	777
TaaI	ACNGT	2 cut(s)	1138, 1817
TaiI	ACGT	3 cut(s)	462, 1364, 1778
TaqII	GACCGA	1 cut(s)	677
TasI	AATT	5 cut(s)	450, 545, 1014, 1150, 1919
TatI	WGTACW	1 cut(s)	722
TauI	GCSGC	6 cut(s)	342, 371, 374, 386, 510, 1590
TfiI	GAWTC	4 cut(s)	655, 926, 1159, 1650
Tru1I	TTAA	6 cut(s)	108, 729, 813, 918, 1266, 1839
Tru9I	TTAA	6 cut(s)	108, 729, 813, 918, 1266, 1839
TscAI	CASTG	1 cut(s)	224
TseFI	GTSAC	3 cut(s)	1036, 1362, 1561
TseI	GCWGC	2 cut(s)	424, 1590
Tsp45I	GTSAC	3 cut(s)	1036, 1362, 1561
TspRI	CASTG	1 cut(s)	224
VpaK11BI	GGWCC	2 cut(s)	520, 660
VspI	ATTAAT	1 cut(s)	1266
XapI	RAATTY	1 cut(s)	1919
XhoI	CTCGAG	1 cut(s)	24
XspI	CTAG	2 cut(s)	41, 263
ZraI	GACGTC	1 cut(s)	460

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.