Pentatricopeptide repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 5 cut(s) | 25, 79, 148, 167, 498 |
| AcsI | RAATTY | 1 cut(s) | 315 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 572 |
| AgsI | TTSAA | 1 cut(s) | 515 |
| AluBI | AGCT | 1 cut(s) | 56 |
| AluI | AGCT | 1 cut(s) | 56 |
| Alw21I | GWGCWC | 1 cut(s) | 58 |
| Ama87I | CYCGRG | 1 cut(s) | 124 |
| ApeKI | GCWGC | 1 cut(s) | 76 |
| ApoI | RAATTY | 1 cut(s) | 315 |
| AseI | ATTAAT | 2 cut(s) | 251, 570 |
| AspLEI | GCGC | 1 cut(s) | 133 |
| AsuC2I | CCSGG | 2 cut(s) | 51, 291 |
| AsuHPI | GGTGA | 4 cut(s) | 5, 103, 389, 427 |
| AvaI | CYCGRG | 1 cut(s) | 124 |
| BaeGI | GKGCMC | 1 cut(s) | 125 |
| BanII | GRGCYC | 2 cut(s) | 58, 185 |
| BauI | CACGAG | 1 cut(s) | 118 |
| BbsI | GAAGAC | 1 cut(s) | 279 |
| Bbv12I | GWGCWC | 1 cut(s) | 58 |
| BbvI | GCAGC | 1 cut(s) | 88 |
| BccI | CCATC | 1 cut(s) | 406 |
| BcnI | CCSGG | 2 cut(s) | 51, 291 |
| BisI | GCNGC | 4 cut(s) | 25, 77, 168, 498 |
| BlsI | GCNGC | 4 cut(s) | 26, 78, 169, 499 |
| Bme1390I | CCNGG | 2 cut(s) | 51, 291 |
| BmeT110I | CYCGRG | 1 cut(s) | 124 |
| BmiI | GGNNCC | 1 cut(s) | 540 |
| BmrFI | CCNGG | 2 cut(s) | 51, 291 |
| BmsI | GCATC | 2 cut(s) | 535, 599 |
| BpiI | GAAGAC | 1 cut(s) | 279 |
| BpuMI | CCSGG | 2 cut(s) | 51, 291 |
| BsaAI | YACGTR | 1 cut(s) | 555 |
| BsaJI | CCNNGG | 2 cut(s) | 49, 71 |
| BsaWI | WCCGGW | 1 cut(s) | 89 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 572 |
| Bse118I | RCCGGY | 1 cut(s) | 113 |
| Bse3DI | GCAATG | 1 cut(s) | 610 |
| BseDI | CCNNGG | 2 cut(s) | 49, 71 |
| BseGI | GGATG | 1 cut(s) | 263 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 572 |
| BseMI | GCAATG | 1 cut(s) | 610 |
| BseRI | GAGGAG | 2 cut(s) | 60, 227 |
| BseSI | GKGCMC | 1 cut(s) | 125 |
| BseXI | GCAGC | 1 cut(s) | 88 |
| BsiHKAI | GWGCWC | 1 cut(s) | 58 |
| BsiHKCI | CYCGRG | 1 cut(s) | 124 |
| BsiSI | CCGG | 5 cut(s) | 51, 90, 114, 223, 290 |
| BslFI | GGGAC | 1 cut(s) | 111 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 572 |
| BsmFI | GGGAC | 1 cut(s) | 111 |
| BsmI | GAATGC | 1 cut(s) | 583 |
| BsoBI | CYCGRG | 1 cut(s) | 124 |
| Bsp1286I | GDGCHC | 3 cut(s) | 58, 125, 185 |
| Bsp143I | GATC | 3 cut(s) | 136, 189, 379 |
| BspACI | CCGC | 5 cut(s) | 25, 79, 148, 167, 498 |
| BspHI | TCATGA | 1 cut(s) | 463 |
| BspLI | GGNNCC | 1 cut(s) | 540 |
| BsrDI | GCAATG | 1 cut(s) | 610 |
| BsrFI | RCCGGY | 1 cut(s) | 113 |
| BssAI | RCCGGY | 1 cut(s) | 113 |
| BssECI | CCNNGG | 2 cut(s) | 49, 71 |
| BssMI | GATC | 3 cut(s) | 136, 189, 379 |
| BssSI | CACGAG | 1 cut(s) | 118 |
| Bst2BI | CACGAG | 1 cut(s) | 118 |
| Bst4CI | ACNGT | 3 cut(s) | 362, 377, 439 |
| Bst6I | CTCTTC | 2 cut(s) | 519, 674 |
| BstBAI | YACGTR | 1 cut(s) | 555 |
| BstDEI | CTNAG | 1 cut(s) | 636 |
| BstF5I | GGATG | 1 cut(s) | 263 |
| BstHHI | GCGC | 1 cut(s) | 133 |
| BstKTI | GATC | 3 cut(s) | 139, 192, 382 |
| BstMBI | GATC | 3 cut(s) | 136, 189, 379 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 62, 587 |
| BstSCI | CCNGG | 2 cut(s) | 49, 289 |
| BstSLI | GKGCMC | 1 cut(s) | 125 |
| BstSNI | TACGTA | 1 cut(s) | 555 |
| BstV1I | GCAGC | 1 cut(s) | 88 |
| BstV2I | GAAGAC | 1 cut(s) | 279 |
| BtgZI | GCGATG | 1 cut(s) | 636 |
| BtsCI | GGATG | 1 cut(s) | 263 |
| CciI | TCATGA | 1 cut(s) | 463 |
| CfoI | GCGC | 1 cut(s) | 133 |
| Cfr10I | RCCGGY | 1 cut(s) | 113 |
| CseI | GACGC | 1 cut(s) | 275 |
| CviAII | CATG | 1 cut(s) | 464 |
| CviJI | RGCY | 6 cut(s) | 56, 117, 183, 222, 392, 497 |
| CviKI_1 | RGCY | 6 cut(s) | 56, 117, 183, 222, 392, 497 |
| DdeI | CTNAG | 1 cut(s) | 636 |
| DpnI | GATC | 3 cut(s) | 138, 191, 381 |
| DpnII | GATC | 3 cut(s) | 136, 189, 379 |
| Eam1104I | CTCTTC | 2 cut(s) | 519, 674 |
| EarI | CTCTTC | 2 cut(s) | 519, 674 |
| Ecl136II | GAGCTC | 1 cut(s) | 56 |
| Eco105I | TACGTA | 1 cut(s) | 555 |
| Eco24I | GRGCYC | 2 cut(s) | 58, 185 |
| Eco53kI | GAGCTC | 1 cut(s) | 56 |
| Eco88I | CYCGRG | 1 cut(s) | 124 |
| EcoICRI | GAGCTC | 1 cut(s) | 56 |
| EcoT38I | GRGCYC | 2 cut(s) | 58, 185 |
| FaeI | CATG | 1 cut(s) | 467 |
| FaqI | GGGAC | 1 cut(s) | 111 |
| FatI | CATG | 1 cut(s) | 463 |
| FauI | CCCGC | 1 cut(s) | 72 |
| FauNDI | CATATG | 1 cut(s) | 237 |
| Fnu4HI | GCNGC | 4 cut(s) | 25, 77, 168, 498 |
| FokI | GGATG | 1 cut(s) | 270 |
| FriOI | GRGCYC | 2 cut(s) | 58, 185 |
| Fsp4HI | GCNGC | 4 cut(s) | 25, 77, 168, 498 |
| GlaI | GCGC | 1 cut(s) | 132 |
| GluI | GCNGC | 4 cut(s) | 25, 77, 168, 498 |
| HapII | CCGG | 5 cut(s) | 51, 90, 114, 223, 290 |
| HgaI | GACGC | 1 cut(s) | 275 |
| HhaI | GCGC | 1 cut(s) | 133 |
| Hin1II | CATG | 1 cut(s) | 467 |
| Hin6I | GCGC | 1 cut(s) | 131 |
| HinP1I | GCGC | 1 cut(s) | 131 |
| HincII | GTYRAC | 1 cut(s) | 444 |
| HindII | GTYRAC | 1 cut(s) | 444 |
| HinfI | GANTC | 3 cut(s) | 108, 226, 460 |
| HpaII | CCGG | 5 cut(s) | 51, 90, 114, 223, 290 |
| HphI | GGTGA | 4 cut(s) | 5, 103, 389, 427 |
| Hpy166II | GTNNAC | 1 cut(s) | 444 |
| Hpy188I | TCNGA | 1 cut(s) | 330 |
| Hpy188III | TCNNGA | 6 cut(s) | 59, 96, 464, 515, 542, 565 |
| Hpy8I | GTNNAC | 1 cut(s) | 444 |
| Hpy99I | CGWCG | 1 cut(s) | 439 |
| HpyAV | CCTTC | 5 cut(s) | 43, 415, 473, 523, 608 |
| HpyCH4III | ACNGT | 3 cut(s) | 362, 377, 439 |
| HpyCH4IV | ACGT | 1 cut(s) | 554 |
| HpyCH4V | TGCA | 2 cut(s) | 369, 581 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 62, 587 |
| HpyF3I | CTNAG | 1 cut(s) | 636 |
| HpySE526I | ACGT | 1 cut(s) | 554 |
| Hsp92II | CATG | 1 cut(s) | 467 |
| HspAI | GCGC | 1 cut(s) | 131 |
| Kzo9I | GATC | 3 cut(s) | 136, 189, 379 |
| LmnI | GCTCC | 3 cut(s) | 53, 61, 92 |
| LpnPI | CCDG | 7 cut(s) | 64, 103, 127, 236, 296, 303, 373 |
| Lsp1109I | GCAGC | 1 cut(s) | 88 |
| LweI | GCATC | 2 cut(s) | 535, 599 |
| MaeII | ACGT | 1 cut(s) | 554 |
| MaeIII | GTNAC | 3 cut(s) | 11, 337, 344 |
| MalI | GATC | 3 cut(s) | 138, 191, 381 |
| MboI | GATC | 3 cut(s) | 136, 189, 379 |
| MboII | GAAGA | 4 cut(s) | 284, 430, 536, 691 |
| MhlI | GDGCHC | 3 cut(s) | 58, 125, 185 |
| MluCI | AATT | 3 cut(s) | 315, 451, 467 |
| MlyI | GAGTC | 1 cut(s) | 102 |
| MmeI | TCCRAC | 1 cut(s) | 155 |
| MnlI | CCTC | 7 cut(s) | 15, 39, 56, 81, 171, 205, 685 |
| MseI | TTAA | 3 cut(s) | 251, 282, 570 |
| MspA1I | CMGCKG | 1 cut(s) | 79 |
| MspI | CCGG | 5 cut(s) | 51, 90, 114, 223, 290 |
| MspR9I | CCNGG | 2 cut(s) | 51, 291 |
| Mva1269I | GAATGC | 1 cut(s) | 583 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 62, 587 |
| NciI | CCSGG | 2 cut(s) | 51, 291 |
| NdeI | CATATG | 1 cut(s) | 237 |
| NdeII | GATC | 3 cut(s) | 136, 189, 379 |
| NlaIII | CATG | 1 cut(s) | 467 |
| NlaIV | GGNNCC | 1 cut(s) | 540 |
| NmeAIII | GCCGAG | 1 cut(s) | 52 |
| NmuCI | GTSAC | 1 cut(s) | 11 |
| PagI | TCATGA | 1 cut(s) | 463 |
| PctI | GAATGC | 1 cut(s) | 583 |
| PfeI | GAWTC | 2 cut(s) | 226, 460 |
| PflFI | GACNNNGTC | 1 cut(s) | 439 |
| PkrI | GCNGC | 4 cut(s) | 26, 78, 169, 499 |
| PleI | GAGTC | 1 cut(s) | 102 |
| PpsI | GAGTC | 1 cut(s) | 102 |
| Ppu21I | YACGTR | 1 cut(s) | 555 |
| PshBI | ATTAAT | 2 cut(s) | 251, 570 |
| Psp124BI | GAGCTC | 1 cut(s) | 58 |
| PspN4I | GGNNCC | 1 cut(s) | 540 |
| PsyI | GACNNNGTC | 1 cut(s) | 439 |
| SacI | GAGCTC | 1 cut(s) | 58 |
| SaqAI | TTAA | 3 cut(s) | 251, 282, 570 |
| SatI | GCNGC | 4 cut(s) | 25, 77, 168, 498 |
| Sau3AI | GATC | 3 cut(s) | 136, 189, 379 |
| SchI | GAGTC | 1 cut(s) | 102 |
| ScrFI | CCNGG | 2 cut(s) | 51, 291 |
| SduI | GDGCHC | 3 cut(s) | 58, 125, 185 |
| SetI | ASST | 3 cut(s) | 58, 484, 557 |
| SfaNI | GCATC | 2 cut(s) | 535, 599 |
| SnaBI | TACGTA | 1 cut(s) | 555 |
| Sse9I | AATT | 3 cut(s) | 315, 451, 467 |
| SsiI | CCGC | 5 cut(s) | 25, 79, 148, 167, 498 |
| SstI | GAGCTC | 1 cut(s) | 58 |
| StyD4I | CCNGG | 2 cut(s) | 49, 289 |
| TaaI | ACNGT | 3 cut(s) | 362, 377, 439 |
| TaiI | ACGT | 1 cut(s) | 557 |
| TaqI | TCGA | 2 cut(s) | 106, 185 |
| TasI | AATT | 3 cut(s) | 315, 451, 467 |
| TauI | GCSGC | 3 cut(s) | 27, 170, 500 |
| TfiI | GAWTC | 2 cut(s) | 226, 460 |
| Tru1I | TTAA | 3 cut(s) | 251, 282, 570 |
| Tru9I | TTAA | 3 cut(s) | 251, 282, 570 |
| TseFI | GTSAC | 1 cut(s) | 11 |
| TseI | GCWGC | 1 cut(s) | 76 |
| Tsp45I | GTSAC | 1 cut(s) | 11 |
| TspDTI | ATGAA | 5 cut(s) | 218, 452, 480, 621, 701 |
| Tth111I | GACNNNGTC | 1 cut(s) | 439 |
| VspI | ATTAAT | 2 cut(s) | 251, 570 |
| XapI | RAATTY | 1 cut(s) | 315 |