Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0000571

Physical Location & Seq

Genomic Coordinates Reverse (-)

15669660 .. 15671543

Gene Structure 1884 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G009370.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1884 bp

ATGAAACCTTACGGACTCCTAAACCCTCAGACCCTTAAAACCCAAAATCTCAGACCCATTTTCCTCACAACCCAATCCCCATCTCTCTCTTCACTCACCAAACCAGACCCTCCACCCATCACCCACCACGCTCTCCTCAACTCCATCCAAGCTTCTCAGTGGCAATTCATCGAACACCTCCCCCCAAACCTTCCCTCTTCTCTAATCTCCCAAACCCTCTTCCATCTCCACAAAACCCCCCACCTTGTCCATCAATTCACATCCCACATCGACATTCTCCGCCTCGAAATCCAAACCCAATGCCTCGCCGTCGCCATTGTCGCCGCCCTGCCTTCCCCAAACCCCTCCCTGGAGCTCCTGAAGCAAGTCCTCGGCAGCAGCATTGCTCCGATCCGAGACGTTTTCGACTCGCTGGCTCGTGCCCGAGTGCGTTTGGGTGCCCAAAGCGGCGTCGTTCTGGACTTGCTGGTAAGTGCTTGCTGTGAGATGAAGAGGGCTGATGACGCTTTTGAGTGCTTTAAATTGATGACGAGTGGAAATGTCATGCCTAGGACTAAGACTTGTAATGAATTGTTGGGTTTGTTTTCGAAATTGAATCGAACCGAGAGGGCTTGGGTTTTGTATGCTGACATGTTTAGGTTGAAGATCAAGTCCAGTGTTTGTACTTTTAACATAATGATTAATGTGTTGTGCAAAGAAGGCAAGTTAAAGAAGGCAAAGGAGTTTCTTGGGTTTATGGAGATTTTGGGGATTAAGCCTACTGTCGTTACTTACAATACTATCATTCATGGGTTTTGTTTGAGAGGAAGAGTTGGAGGGGCTCAGATGATCTTTAGTGCTATGAAAGGGAGAGGAGTTAAGCCAGATTCTTACACGTATGGATTGCTTATTAGTGGGATGTGTAAGGAGAGAAGGCTTGATGAAGCGTCTGGTCTTTTTGATAAAATGCTGGAAATTGGGTTGCTTCCGAGTGCTGTTACTTATAATACCCTGATTGATGGTTATTGCAATAAGGGTGATCTGGATAGGGCCTACGGTTATAGAGATGAGATGGTGAAGAAGGGTATAATGCCGACGGTGTCAACTTACAATTTGTTGATTCATGAATTGTTTATGGAAGGTAGGGTGAATGAAGCTGATTGTATGGTTAGAGAAATGGAAGAGAAGGGAATGGTTCCTGATGCCATTACGTATAATATCCTGATTAATGGCTTTTGCAGGTCTGGGAATGCAAAGAAAGCATTTATCCTTCACGATGAAATGTTGAGCAAAGGGATAGAGCCCACTAAGGAAACTTATACATCACTTATTTATGTTTTGAGTAAAAGGAAGAGAATGAATGAGGCAGATGACTTGTTTGAGAAGATACTGCGTAAGGGTGTTCTACCAGATCTTGTGATGTTCAATGCCTTGATTGATGGTCATTGTGCTAATGGGAATATGGAGCGTGCATTTTCGCTTTTGAGGGAGATGGATAAAATGAAGGTTAATCCAGATGAAGTCACTTACAATACCCTAATGCAAGGGCGCTGCAGGACAGGGAAAGTTGAGGAAGCTCGGGAACTTCTGGATGAGATGAAGAGAAGAGGAATTAAGCCTGATTACATTAGTTACAACACCCTCATTAGTGGACATAGTAAACGAGGTGATATGAATGATGCCTTCAAAGTTCGAGACGAGATGTTGAGTAGAGGTTTCAATCCTACACTTCTAACGTACAATGCTCTTATAAAAGGTCTATGCAAAAACCAAGAAGGTGAGCTTGCTCAAGAGCTCCTTAAAGAAATGGTGAGCAGAGGGATTACTCCCGATGACAGCACATATTACTCTCTGATTGAGGGAATTGAGAATGTTGAGGAATTTCTCAAAAAGGGCGATTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3 PPR_long

Protein Analysis

627

Amino Acids

70.6

Weight (kDa)

8.54

Isoelectric Point (pI)

32.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_long	PF17177	158 - 293	1.9e-06	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	184 - 232	5.1e-10	PPR repeat family
PPR_3	PF13812	207 - 263	4.3e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	217 - 247	1.1e-08	PPR repeat
PPR_2	PF13041	219 - 266	1.1e-14	PPR repeat family
PPR	PF01535	222 - 251	9.8e-06	PPR repeat
PPR_1	PF12854	250 - 282	2.8e-11	PPR repeat
PPR_2	PF13041	253 - 302	1.6e-17	PPR repeat family
PPR	PF01535	256 - 286	8.3e-06	PPR repeat
PPR_long	PF17177	276 - 368	6.5e-07	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	277 - 333	6.6e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	284 - 316	1.1e-11	PPR repeat
PPR	PF01535	291 - 321	8.1e-07	PPR repeat
PPR_2	PF13041	296 - 329	9.2e-07	PPR repeat family
PPR_3	PF13812	312 - 367	5.3e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	320 - 352	6.6e-12	PPR repeat
PPR_2	PF13041	323 - 370	6.3e-16	PPR repeat family
PPR	PF01535	326 - 356	4.5e-09	PPR repeat
PPR_1	PF12854	354 - 387	3.8e-06	PPR repeat
PPR_2	PF13041	358 - 407	2e-16	PPR repeat family
PPR_long	PF17177	376 - 439	5.8e-07	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	383 - 442	2.2e-09	Pentatricopeptide repeat domain
TPR_24	PF23276	386 - 447	3.7e-06	Fungal tetratrico peptide repeats
PPR_1	PF12854	389 - 421	8.1e-13	PPR repeat
PPR_2	PF13041	393 - 441	8.9e-16	PPR repeat family
PPR	PF01535	396 - 426	8.9e-09	PPR repeat
PPR_long	PF17177	420 - 527	1.5e-09	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	452 - 508	6.6e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	459 - 491	3.1e-11	PPR repeat
TPR_24	PF23276	460 - 557	1e-08	Fungal tetratrico peptide repeats
PPR_2	PF13041	463 - 511	1.5e-16	PPR repeat family
PPR	PF01535	466 - 495	2e-07	PPR repeat
PPR_1	PF12854	496 - 527	1.5e-11	PPR repeat
PPR_2	PF13041	498 - 544	6.6e-18	PPR repeat family
PPR	PF01535	501 - 531	9.8e-09	PPR repeat
PPR_long	PF17177	517 - 613	1.8e-07	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	522 - 579	3.1e-14	Pentatricopeptide repeat domain
PPR_1	PF12854	529 - 561	6.7e-10	PPR repeat
PPR_2	PF13041	533 - 582	1.2e-17	PPR repeat family
PPR	PF01535	536 - 566	9.4e-08	PPR repeat
PPR_1	PF12854	564 - 597	5.3e-08	PPR repeat
PPR_2	PF13041	568 - 614	3.5e-13	PPR repeat family
PPR	PF01535	572 - 601	2.6e-07	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0000571)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G15630
fragaria_vesca	FvH4_2g07360
malus_domestica	MD02G1234600.v1.1
prunus_persica	Prupe.8G019300_v2.0.a1
pyrus_communis	pycom02g20240 pycom05g06440 pycom10g06900
rosa_chinensis	RchiOBHm_Chr2g0106031 RchiOBHm_Chr2g0124301 RchiOBHm_Chr2g0124591 RchiOBHm_Chr5g0034701 RchiOBHm_Chr6g0257571 RchiOBHm_Chr6g0259961 RchiOBHm_Chr6g0260151 RchiOBHm_Chr6g0260161 RchiOBHm_Chr6g0260361 RchiOBHm_Chr6g0260391 RchiOBHm_Chr6g0260531 RchiOBHm_Chr6g0260541 RchiOBHm_Chr6g0260661 RchiOBHm_Chr6g0260761 RchiOBHm_Chr6g0266771 RchiOBHm_Chr7g0210581 RchiOBHm_Chr7g0225201 RchiOBHm_Chr7g0225221
rosa_laevigata	RLG00000001833 RLG00000001834 RLG00000014081 RLG00000014490 RLG00000014495 RLG00000015073 RLG00000034098
rosa_multiflora	Rmu_sc0000414.1_g000008 Rmu_sc0000546.1_g000067 Rmu_sc0000588.1_g000057 Rmu_sc0000861.1_g000058 Rmu_sc0000861.1_g000059 Rmu_sc0002766.1_g000023 Rmu_sc0002968.1_g000001 Rmu_sc0003786.1_g000024 Rmu_sc0005472.1_g000021 Rmu_sc0010278.1_g000006 Rmu_sc0014629.1_g000014 Rmu_sc0036189.1_g000001
rosa_roxburghii	Rroxscaffold_3G00234010 Rroxscaffold_5G00368980 Rroxscaffold_7G00201460 Rroxscaffold_7G00207310 Rroxscaffold_7G00207360 Rroxscaffold_7G00207370 Rroxscaffold_7G00210730
rosa_rugosa	Rorug05G0196300 Rorug05G0359600 Rorug05G0591800 Rorug05G0592300 Rorug05G0592700 Rorug06G0023500 Rorug07G0228100
rosa_samantha	Rh2CG188200 Rh2DG333800 Rh4DG026900 Rh5CG249600 Rh6BG104200 Rh6BG104500 Rh6BG105900 Rh6BG106000 Rh6CG076700 Rh6CG097500 Rh6CG098200 Rh6CG100800 Rh6CG101000 Rh6CG101200 Rh6CG102400 Rh6CG144100 Rh6DG093200 Rh7AG375200 Rh7AG375300 Rh7BG360300
rosa_wichuraiana	Rw0G020720 Rw5G026430 Rw6G009370 Rw6G009450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	984, 1730
Acc36I	ACCTGC	1 cut(s)	1209
AccB1I	GGYRCC	1 cut(s)	437
AciI	CCGC	3 cut(s)	280, 324, 447
AclWI	GGATC	1 cut(s)	385
AcsI	RAATTY	1 cut(s)	1859
AcuI	CTGAAG	1 cut(s)	380
AcyI	GRCGYC	1 cut(s)	450
AfaI	GTAC	2 cut(s)	664, 1718
AfiI	CCNNNNNNNGG	1 cut(s)	349
AflIII	ACRYGT	2 cut(s)	630, 873
AgsI	TTSAA	5 cut(s)	595, 643, 1405, 1666, 1699
AjnI	CCWGG	1 cut(s)	348
AluBI	AGCT	6 cut(s)	152, 355, 1136, 1556, 1762, 1774
AluI	AGCT	6 cut(s)	152, 355, 1136, 1556, 1762, 1774
Alw21I	GWGCWC	2 cut(s)	357, 1776
Alw26I	GTCTC	2 cut(s)	390, 1668
AlwI	GGATC	1 cut(s)	385
Ama87I	CYCGRG	2 cut(s)	423, 1557
AoxI	GGCC	1 cut(s)	1029
ApeKI	GCWGC	3 cut(s)	375, 378, 1530
ApoI	RAATTY	1 cut(s)	1859
AseI	ATTAAT	2 cut(s)	681, 1206
AspA2I	CCTAGG	1 cut(s)	548
AspLEI	GCGC	1 cut(s)	1530
AspS9I	GGNCC	1 cut(s)	1029
AsuHPI	GGTGA	8 cut(s)	88, 112, 1028, 1066, 1138, 1658, 1769, 1801
AsuII	TTCGAA	1 cut(s)	587
AvaI	CYCGRG	2 cut(s)	423, 1557
AvrII	CCTAGG	1 cut(s)	548
BaeGI	GKGCMC	2 cut(s)	424, 442
BanI	GGYRCC	1 cut(s)	437
BanII	GRGCYC	4 cut(s)	357, 823, 1284, 1776
BauI	CACGAG	1 cut(s)	417
Bbv12I	GWGCWC	2 cut(s)	357, 1776
BbvI	GCAGC	3 cut(s)	387, 390, 1517
BccI	CCATC	9 cut(s)	88, 125, 152, 231, 258, 992, 1045, 1412, 1465
BceAI	ACGGC	1 cut(s)	293
BciT130I	CCWGG	1 cut(s)	350
BcoDI	GTCTC	2 cut(s)	390, 1668
BfaI	CTAG	1 cut(s)	549
BfmI	CTRYAG	1 cut(s)	1531
BfoI	RGCGCY	1 cut(s)	1531
BfuAI	ACCTGC	1 cut(s)	1209
BglII	AGATCT	1 cut(s)	1390
BisI	GCNGC	5 cut(s)	324, 376, 379, 448, 1531
BlnI	CCTAGG	1 cut(s)	548
BlsI	GCNGC	5 cut(s)	325, 377, 380, 449, 1532
Bme1390I	CCNGG	1 cut(s)	350
BmeT110I	CYCGRG	2 cut(s)	423, 1557
BmgT120I	GGNCC	1 cut(s)	1029
BmiI	GGNNCC	2 cut(s)	439, 1176
BmrFI	CCNGG	1 cut(s)	350
BmsI	GCATC	2 cut(s)	1171, 1648
BpmI	CTGGAG	1 cut(s)	371
Bpu14I	TTCGAA	1 cut(s)	587
BpuEI	CTTGAG	1 cut(s)	1752
BsaAI	YACGTR	2 cut(s)	876, 1191
BsaHI	GRCGYC	1 cut(s)	450
BsaJI	CCNNGG	3 cut(s)	348, 370, 548
Bsc4I	CCNNNNNNNGG	1 cut(s)	349
Bse1I	ACTGG	1 cut(s)	654
Bse3DI	GCAATG	1 cut(s)	381
BseBI	CCWGG	1 cut(s)	350
BseDI	CCNNGG	3 cut(s)	348, 370, 548
BseGI	GGATG	4 cut(s)	144, 260, 903, 1576
BseLI	CCNNNNNNNGG	1 cut(s)	349
BseMI	GCAATG	1 cut(s)	381
BseMII	CTCAG	4 cut(s)	41, 64, 170, 836
BseNI	ACTGG	1 cut(s)	654
BseRI	GAGGAG	2 cut(s)	125, 867
BseSI	GKGCMC	2 cut(s)	424, 442
BseXI	GCAGC	3 cut(s)	387, 390, 1517
BshFI	GGCC	1 cut(s)	1031
BshNI	GGYRCC	1 cut(s)	437
BsiHKAI	GWGCWC	2 cut(s)	357, 1776
BsiHKCI	CYCGRG	2 cut(s)	423, 1557
BslI	CCNNNNNNNGG	1 cut(s)	349
BsmAI	GTCTC	2 cut(s)	390, 1668
BsmBI	CGTCTC	2 cut(s)	390, 1668
BsmI	GAATGC	1 cut(s)	1234
BsnI	GGCC	1 cut(s)	1031
BsoBI	CYCGRG	2 cut(s)	423, 1557
Bsp119I	TTCGAA	1 cut(s)	587
Bsp1286I	GDGCHC	6 cut(s)	357, 424, 442, 823, 1284, 1776
Bsp143I	GATC	5 cut(s)	390, 645, 828, 1018, 1390
BspACI	CCGC	3 cut(s)	280, 324, 447
BspANI	GGCC	1 cut(s)	1031
BspCNI	CTCAG	4 cut(s)	40, 63, 169, 835
BspHI	TCATGA	2 cut(s)	1102, 1880
BspLI	GGNNCC	2 cut(s)	439, 1176
BspMAI	CTGCAG	1 cut(s)	1535
BspMI	ACCTGC	1 cut(s)	1209
BspPI	GGATC	1 cut(s)	385
BspT104I	TTCGAA	1 cut(s)	587
BspT107I	GGYRCC	1 cut(s)	437
BsrDI	GCAATG	1 cut(s)	381
BsrI	ACTGG	1 cut(s)	654
BssECI	CCNNGG	3 cut(s)	348, 370, 548
BssMI	GATC	5 cut(s)	390, 645, 828, 1018, 1390
BssNI	GRCGYC	1 cut(s)	450
BssSI	CACGAG	1 cut(s)	417
BssT1I	CCWWGG	1 cut(s)	548
Bst2BI	CACGAG	1 cut(s)	417
Bst2UI	CCWGG	1 cut(s)	350
Bst4CI	ACNGT	3 cut(s)	763, 1037, 1078
Bst6I	CTCTTC	9 cut(s)	94, 202, 224, 485, 802, 1155, 1325, 1574, 1579
BstACI	GRCGYC	1 cut(s)	450
BstBAI	YACGTR	2 cut(s)	876, 1191
BstBI	TTCGAA	1 cut(s)	587
BstC8I	GCNNGC	4 cut(s)	414, 478, 1449, 1764
BstDEI	CTNAG	6 cut(s)	27, 50, 156, 555, 822, 1287
BstF5I	GGATG	4 cut(s)	144, 260, 903, 1576
BstH2I	RGCGCY	1 cut(s)	1531
BstHHI	GCGC	1 cut(s)	1530
BstKTI	GATC	5 cut(s)	393, 648, 831, 1021, 1393
BstMAI	GTCTC	2 cut(s)	390, 1668
BstMBI	GATC	5 cut(s)	390, 645, 828, 1018, 1390
BstMWI	GCNNNNNNNGC	5 cut(s)	320, 361, 503, 699, 1238
BstNI	CCWGG	1 cut(s)	350
BstNSI	RCATGY	1 cut(s)	634
BstSCI	CCNGG	1 cut(s)	348
BstSFI	CTRYAG	1 cut(s)	1531
BstSLI	GKGCMC	2 cut(s)	424, 442
BstSNI	TACGTA	1 cut(s)	1191
BstV1I	GCAGC	3 cut(s)	387, 390, 1517
BstX2I	RGATCY	1 cut(s)	1390
BstYI	RGATCY	1 cut(s)	1390
BsuRI	GGCC	1 cut(s)	1031
BtsCI	GGATG	4 cut(s)	144, 260, 903, 1576
BtsIMutI	CAGTG	2 cut(s)	164, 661
BveI	ACCTGC	1 cut(s)	1209
Cac8I	GCNNGC	4 cut(s)	414, 478, 1449, 1764
CciI	TCATGA	2 cut(s)	1102, 1880
CfoI	GCGC	1 cut(s)	1530
Cfr13I	GGNCC	1 cut(s)	1029
CseI	GACGC	3 cut(s)	439, 512, 915
Csp6I	GTAC	2 cut(s)	663, 1717
CviAII	CATG	5 cut(s)	544, 631, 788, 1103, 1881
CviQI	GTAC	2 cut(s)	663, 1717
DdeI	CTNAG	6 cut(s)	27, 50, 156, 555, 822, 1287
DpnI	GATC	5 cut(s)	392, 647, 830, 1020, 1392
DpnII	GATC	5 cut(s)	390, 645, 828, 1018, 1390
DraI	TTTAAA	1 cut(s)	520
Eam1104I	CTCTTC	9 cut(s)	94, 202, 224, 485, 802, 1155, 1325, 1574, 1579
EarI	CTCTTC	9 cut(s)	94, 202, 224, 485, 802, 1155, 1325, 1574, 1579
EciI	GGCGGA	1 cut(s)	269
Ecl136II	GAGCTC	2 cut(s)	355, 1774
Eco105I	TACGTA	1 cut(s)	1191
Eco130I	CCWWGG	1 cut(s)	548
Eco24I	GRGCYC	4 cut(s)	357, 823, 1284, 1776
Eco53kI	GAGCTC	2 cut(s)	355, 1774
Eco57I	CTGAAG	1 cut(s)	380
Eco88I	CYCGRG	2 cut(s)	423, 1557
EcoICRI	GAGCTC	2 cut(s)	355, 1774
EcoO109I	RGGNCCY	1 cut(s)	1029
EcoRII	CCWGG	1 cut(s)	348
EcoT14I	CCWWGG	1 cut(s)	548
EcoT38I	GRGCYC	4 cut(s)	357, 823, 1284, 1776
ErhI	CCWWGG	1 cut(s)	548
Esp3I	CGTCTC	2 cut(s)	390, 1668
FaeI	CATG	5 cut(s)	547, 634, 791, 1106, 1884
FalI	AAGNNNNNCTT	4 cut(s)	1746, 1778, 1761, 1793
FatI	CATG	5 cut(s)	543, 630, 787, 1102, 1880
Fnu4HI	GCNGC	5 cut(s)	324, 376, 379, 448, 1531
FokI	GGATG	4 cut(s)	131, 247, 910, 1583
FriOI	GRGCYC	4 cut(s)	357, 823, 1284, 1776
Fsp4HI	GCNGC	5 cut(s)	324, 376, 379, 448, 1531
FspBI	CTAG	1 cut(s)	549
GlaI	GCGC	1 cut(s)	1529
GluI	GCNGC	5 cut(s)	324, 376, 379, 448, 1531
GsuI	CTGGAG	1 cut(s)	371
HaeII	RGCGCY	1 cut(s)	1531
HaeIII	GGCC	1 cut(s)	1031
HgaI	GACGC	3 cut(s)	439, 512, 915
HhaI	GCGC	1 cut(s)	1530
Hin1I	GRCGYC	1 cut(s)	450
Hin1II	CATG	5 cut(s)	547, 634, 791, 1106, 1884
Hin6I	GCGC	1 cut(s)	1528
HinP1I	GCGC	1 cut(s)	1528
HincII	GTYRAC	1 cut(s)	1083
HindII	GTYRAC	1 cut(s)	1083
HindIII	AAGCTT	1 cut(s)	150
HinfI	GANTC	6 cut(s)	15, 407, 595, 866, 1099, 1877
HphI	GGTGA	8 cut(s)	88, 112, 1028, 1066, 1138, 1658, 1769, 1801
Hpy166II	GTNNAC	3 cut(s)	1083, 1631, 1640
Hpy188I	TCNGA	7 cut(s)	30, 53, 390, 395, 825, 969, 1833
Hpy8I	GTNNAC	3 cut(s)	1083, 1631, 1640
Hpy99I	CGWCG	3 cut(s)	314, 455, 1078
HpyCH4III	ACNGT	3 cut(s)	763, 1037, 1078
HpyCH4IV	ACGT	4 cut(s)	399, 875, 1190, 1715
HpyCH4V	TGCA	8 cut(s)	693, 1008, 1218, 1232, 1451, 1522, 1533, 1743
HpyF10VI	GCNNNNNNNGC	5 cut(s)	320, 361, 503, 699, 1238
HpyF3I	CTNAG	6 cut(s)	27, 50, 156, 555, 822, 1287
HpySE526I	ACGT	4 cut(s)	399, 875, 1190, 1715
Hsp92I	GRCGYC	1 cut(s)	450
Hsp92II	CATG	5 cut(s)	547, 634, 791, 1106, 1884
HspAI	GCGC	1 cut(s)	1528
Kzo9I	GATC	5 cut(s)	390, 645, 828, 1018, 1390
LmnI	GCTCC	5 cut(s)	352, 360, 391, 1444, 1779
Lsp1109I	GCAGC	3 cut(s)	387, 390, 1517
LweI	GCATC	2 cut(s)	1171, 1648
MaeI	CTAG	1 cut(s)	549
MaeII	ACGT	4 cut(s)	399, 875, 1190, 1715
MaeIII	GTNAC	4 cut(s)	766, 976, 1501, 1610
MalI	GATC	5 cut(s)	392, 647, 830, 1020, 1392
MboI	GATC	5 cut(s)	390, 645, 828, 1018, 1390
MflI	RGATCY	1 cut(s)	1390
MhlI	GDGCHC	6 cut(s)	357, 424, 442, 823, 1284, 1776
MlyI	GAGTC	2 cut(s)	9, 401
MmeI	TCCRAC	1 cut(s)	793
MspR9I	CCNGG	1 cut(s)	350
Mva1269I	GAATGC	1 cut(s)	1234
MvaI	CCWGG	1 cut(s)	350
MwoI	GCNNNNNNNGC	5 cut(s)	320, 361, 503, 699, 1238
NdeII	GATC	5 cut(s)	390, 645, 828, 1018, 1390
NlaIII	CATG	5 cut(s)	547, 634, 791, 1106, 1884
NlaIV	GGNNCC	2 cut(s)	439, 1176
NmeAIII	GCCGAG	1 cut(s)	351
NmuCI	GTSAC	1 cut(s)	1501
NspI	RCATGY	1 cut(s)	634
NspV	TTCGAA	1 cut(s)	587
PagI	TCATGA	2 cut(s)	1102, 1880
PciI	ACATGT	1 cut(s)	630
PctI	GAATGC	1 cut(s)	1234
PfeI	GAWTC	4 cut(s)	595, 866, 1099, 1877
PflFI	GACNNNGTC	1 cut(s)	1078
PkrI	GCNGC	5 cut(s)	325, 377, 380, 449, 1532
PleI	GAGTC	2 cut(s)	9, 401
PpsI	GAGTC	2 cut(s)	9, 401
Ppu21I	YACGTR	2 cut(s)	876, 1191
PscI	ACATGT	1 cut(s)	630
PshBI	ATTAAT	2 cut(s)	681, 1206
PsiI	TTATAA	2 cut(s)	984, 1730
Psp124BI	GAGCTC	2 cut(s)	357, 1776
Psp6I	CCWGG	1 cut(s)	348
PspGI	CCWGG	1 cut(s)	348
PspN4I	GGNNCC	2 cut(s)	439, 1176
PspPI	GGNCC	1 cut(s)	1029
PstI	CTGCAG	1 cut(s)	1535
PsuI	RGATCY	1 cut(s)	1390
PsyI	GACNNNGTC	1 cut(s)	1078
RsaI	GTAC	2 cut(s)	664, 1718
RsaNI	GTAC	2 cut(s)	663, 1717
SacI	GAGCTC	2 cut(s)	357, 1776
SatI	GCNGC	5 cut(s)	324, 376, 379, 448, 1531
Sau3AI	GATC	5 cut(s)	390, 645, 828, 1018, 1390
Sau96I	GGNCC	1 cut(s)	1029
SchI	GAGTC	2 cut(s)	9, 401
ScrFI	CCNGG	1 cut(s)	350
SduI	GDGCHC	6 cut(s)	357, 424, 442, 823, 1284, 1776
SfaNI	GCATC	2 cut(s)	1171, 1648
SfcI	CTRYAG	1 cut(s)	1531
SfuI	TTCGAA	1 cut(s)	587
SmlI	CTYRAG	1 cut(s)	1767
SmoI	CTYRAG	1 cut(s)	1767
SnaBI	TACGTA	1 cut(s)	1191
SsiI	CCGC	3 cut(s)	280, 324, 447
SspMI	CTAG	1 cut(s)	549
SstI	GAGCTC	2 cut(s)	357, 1776
StyD4I	CCNGG	1 cut(s)	348
StyI	CCWWGG	1 cut(s)	548
TaaI	ACNGT	3 cut(s)	763, 1037, 1078
TaiI	ACGT	4 cut(s)	402, 878, 1193, 1718
TaqI	TCGA	7 cut(s)	171, 270, 285, 405, 587, 598, 1672
TatI	WGTACW	1 cut(s)	662
TauI	GCSGC	2 cut(s)	326, 450
TfiI	GAWTC	4 cut(s)	595, 866, 1099, 1877
TscAI	CASTG	2 cut(s)	164, 661
TseFI	GTSAC	1 cut(s)	1501
TseI	GCWGC	3 cut(s)	375, 378, 1530
Tsp45I	GTSAC	1 cut(s)	1501
TspGWI	ACGGA	1 cut(s)	27
TspRI	CASTG	2 cut(s)	164, 661
Tth111I	GACNNNGTC	1 cut(s)	1078
VspI	ATTAAT	2 cut(s)	681, 1206
XapI	RAATTY	1 cut(s)	1859
XceI	RCATGY	1 cut(s)	634
XmaJI	CCTAGG	1 cut(s)	548
XspI	CTAG	1 cut(s)	549

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.