Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0000571

Physical Location & Seq

Genomic Coordinates Forward (+)

53994438 .. 53997386

Gene Structure 2949 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000014495

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1872 bp

ATGAAATCTCACAAACTCCTAAACCCTCAGACCCTTAAACCCCAAAATCTCAGACCCATCCAAACCCAATCTCTCTGTTCACTCACCCAACCAGACCCTCCACCCATCACCCACCACTCTCTCCTCAACTCCATCCAAACTTCTCACTGGCAATTCATCGAACACCTTCCGCCCAGCCTTCCCTCCTCTCTTGTTTCCCAAACCCTTCTCCATCTCCACCAAAGCCCTCACCTTGTCCATCAATTCACATCCCACATCGACTTTCTCCGCCTCGAAATCGAAACCCAATGCCTCGCCGTCGCCATTCTCGCCGCCCTGCCTTCCCCAAAATCCTCCCTGGACCTCCTGAAGCAACTCCTCGGCAGCAGCATTGCTCCGATTCGAGACGTTTTCGACTCGCTGGCTCGTGCCCGAGTGCGTTTGGGTGCGCAAAGCGGCGTCGTTTTGGACTTGCTGGTAAGTGCTTGCTGTGAATTGAAGAGGGCTGATGACGCTTTTCAGTGCTTTAGCTTGATGACGAGTGACAATGTTATGCCTAGGACTAAGACTTGTAATGACTTGTTGAGTTTGTTTTCGAAATTGAATCGAACCGAGAGGGCTTGGGTTTTGTATGCTGACATGTTTAGGTTGAAAATCAAGTCGAGTGTTTGTACTTTTAACATCATGATTAATGTGTTGTGCAAAGAAGGCAAGTTAAAGAAGGCAAAGGAGTTTCTTGGGTTTATGGAGATTTTGGGGATTAAGCCTACTGTTGTTACTTATAATACTATCATTCATGGGTTTTGTTTGAGAGGAAGAGTTGGAGGGGCTCAGATGATCTTTAGTGCTATGAAAGGGAGAGGAGTTAAGCCAGATTCTTACACGTATGGATTGCTTATTAGTGGGATGTGTAAGGAGAGAAGGCTTGATGAAGCGTCTGGTCTTTTTGATAAAATGCTGGAAATTGGGTTGCTTCCGAGTGCTGTTACTTATAATACCCTGATTGATGGTTATTGCAATAAGGGTGATCTGGATAGGGCCTACGGTTATAGAGATGAGATGGTGAAGAAGGGTATAATGCCGACGGTGTCAACTTACAATTTGTTGATTCATGAATTGTTTATGAAAGGTAGGGTGAATGAAGCTGATTGTATGGTTAGAGAAATGGAAGAGAAGGGAATGGTTCCTGATGCCATTACGTATAATGTCCTGATTAATGGCTATTGCAGGTCTGGGAATGCAAAGAAAGCGTTTATCCTTCACGATGAAATGTTGAGCAAAGGGATAGAGCCCACTAAGGAAACTTATACATCCCTTATTTATGTTTTGAGTAAAAGGAAGAGAATGAATGAGGCAGATGACTTGTTTGAGAAGATACCGCGTAAGGGTGTTCTACCAGATCTTGTGATGTTCAATGCCTTGATTGATGGTCATTGTGCTAATGGGAATATGGAGCGTGCATTTTCGCTTTTGAGGGAGATGGATAAAATGAAGGTTAATCCAGATGAAGTCACTTACAATACCCTAATGCAAGGGCGCTGCAGGACAGGGAAAGTTGAGGAAGCTCGGGAACTTCTGGATGAGATGAAGAGAAGAGGAATTAAGCCTGATTACATTAGTTACAACACCCTCATTAGTGGACATAGTAAACGAGGTGATATGAATGATGCCTTCAAAGTCCGAGACGAGATGTTGAGTAGAGGTTTCAATCCAACACTTCTAACGTACAATGCTCTTATAAAAGGTCTATGCAAAAACCAAGAAGGTGATCTTGCTCAAGAGCTCCTTAAAGAAATGGTGAGCAGAGGGATTACTCCCGATGACAGCACATATTACTCTCTGATTGAGGGAATTGAGAATGTTGAGGAATTTCTCAAAAAGGGTGATTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3 PPR_long

Protein Analysis

624

Amino Acids

70.24

Weight (kDa)

8.52

Isoelectric Point (pI)

32.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	180 - 228	5.8e-10	PPR repeat family
PPR_3	PF13812	203 - 259	4.2e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	213 - 243	1.1e-08	PPR repeat
PPR_2	PF13041	215 - 262	1.1e-14	PPR repeat family
PPR	PF01535	218 - 247	9.7e-06	PPR repeat
PPR_1	PF12854	246 - 278	2.8e-11	PPR repeat
PPR_2	PF13041	249 - 298	1.5e-17	PPR repeat family
PPR	PF01535	252 - 282	8.2e-06	PPR repeat
PPR_long	PF17177	272 - 365	4.5e-07	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	273 - 329	6.5e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	280 - 312	1e-11	PPR repeat
PPR	PF01535	287 - 317	8.1e-07	PPR repeat
PPR_2	PF13041	292 - 325	9.2e-07	PPR repeat family
PPR_3	PF13812	308 - 363	5.3e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	316 - 348	6.6e-12	PPR repeat
PPR_2	PF13041	319 - 366	6.2e-16	PPR repeat family
PPR	PF01535	322 - 352	4.4e-09	PPR repeat
PPR_1	PF12854	350 - 383	4.2e-06	PPR repeat
PPR_2	PF13041	354 - 403	8.1e-16	PPR repeat family
PPR_long	PF17177	371 - 437	2e-07	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	379 - 438	7.3e-10	Pentatricopeptide repeat domain
TPR_24	PF23276	382 - 486	4.4e-11	Fungal tetratrico peptide repeats
PPR_1	PF12854	385 - 417	5.9e-12	PPR repeat
PPR_2	PF13041	389 - 437	4.4e-16	PPR repeat family
PPR	PF01535	392 - 422	2.5e-09	PPR repeat
PPR_long	PF17177	415 - 519	3e-09	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	448 - 504	4.7e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	455 - 487	3.1e-11	PPR repeat
PPR_2	PF13041	459 - 507	1.5e-16	PPR repeat family
TPR_24	PF23276	460 - 553	1.2e-08	Fungal tetratrico peptide repeats
PPR	PF01535	462 - 491	2e-07	PPR repeat
PPR_1	PF12854	492 - 523	1.5e-11	PPR repeat
PPR_2	PF13041	494 - 540	6.5e-18	PPR repeat family
PPR	PF01535	497 - 527	9.7e-09	PPR repeat
PPR_long	PF17177	512 - 609	1e-07	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	518 - 575	3.1e-14	Pentatricopeptide repeat domain
PPR_1	PF12854	525 - 557	6.6e-10	PPR repeat
PPR_2	PF13041	529 - 578	1.2e-17	PPR repeat family
PPR	PF01535	532 - 562	9.3e-08	PPR repeat
PPR_1	PF12854	560 - 593	1.2e-08	PPR repeat
PPR_2	PF13041	564 - 610	4.4e-13	PPR repeat family
PPR	PF01535	568 - 597	3.1e-07	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0000571)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G15630
fragaria_vesca	FvH4_2g07360
malus_domestica	MD02G1234600.v1.1
prunus_persica	Prupe.8G019300_v2.0.a1
pyrus_communis	pycom02g20240 pycom05g06440 pycom10g06900
rosa_chinensis	RchiOBHm_Chr2g0106031 RchiOBHm_Chr2g0124301 RchiOBHm_Chr2g0124591 RchiOBHm_Chr5g0034701 RchiOBHm_Chr6g0257571 RchiOBHm_Chr6g0259961 RchiOBHm_Chr6g0260151 RchiOBHm_Chr6g0260161 RchiOBHm_Chr6g0260361 RchiOBHm_Chr6g0260391 RchiOBHm_Chr6g0260531 RchiOBHm_Chr6g0260541 RchiOBHm_Chr6g0260661 RchiOBHm_Chr6g0260761 RchiOBHm_Chr6g0266771 RchiOBHm_Chr7g0210581 RchiOBHm_Chr7g0225201 RchiOBHm_Chr7g0225221
rosa_laevigata	RLG00000001833 RLG00000001834 RLG00000014081 RLG00000014490 RLG00000014495 RLG00000015073 RLG00000034098
rosa_multiflora	Rmu_sc0000414.1_g000008 Rmu_sc0000546.1_g000067 Rmu_sc0000588.1_g000057 Rmu_sc0000861.1_g000058 Rmu_sc0000861.1_g000059 Rmu_sc0002766.1_g000023 Rmu_sc0002968.1_g000001 Rmu_sc0003786.1_g000024 Rmu_sc0005472.1_g000021 Rmu_sc0010278.1_g000006 Rmu_sc0014629.1_g000014 Rmu_sc0036189.1_g000001
rosa_roxburghii	Rroxscaffold_3G00234010 Rroxscaffold_5G00368980 Rroxscaffold_7G00201460 Rroxscaffold_7G00207310 Rroxscaffold_7G00207360 Rroxscaffold_7G00207370 Rroxscaffold_7G00210730
rosa_rugosa	Rorug05G0196300 Rorug05G0359600 Rorug05G0591800 Rorug05G0592300 Rorug05G0592700 Rorug06G0023500 Rorug07G0228100
rosa_samantha	Rh2CG188200 Rh2DG333800 Rh4DG026900 Rh5CG249600 Rh6BG104200 Rh6BG104500 Rh6BG105900 Rh6BG106000 Rh6CG076700 Rh6CG097500 Rh6CG098200 Rh6CG100800 Rh6CG101000 Rh6CG101200 Rh6CG102400 Rh6CG144100 Rh6DG093200 Rh7AG375200 Rh7AG375300 Rh7BG360300
rosa_wichuraiana	Rw0G020720 Rw5G026430 Rw6G009370 Rw6G009450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	762, 972, 1718
Acc16I	TGCGCA	1 cut(s)	429
Acc36I	ACCTGC	1 cut(s)	1197
AccII	CGCG	1 cut(s)	1360
AciI	CCGC	5 cut(s)	170, 268, 312, 435, 1358
AcsI	RAATTY	1 cut(s)	1847
AcuI	CTGAAG	1 cut(s)	368
AcyI	GRCGYC	1 cut(s)	438
AfaI	GTAC	2 cut(s)	652, 1706
AfiI	CCNNNNNNNGG	1 cut(s)	1364
AflIII	ACRYGT	2 cut(s)	618, 861
AgsI	TTSAA	6 cut(s)	478, 583, 631, 1393, 1654, 1687
AjnI	CCWGG	1 cut(s)	336
AluBI	AGCT	4 cut(s)	510, 1124, 1544, 1762
AluI	AGCT	4 cut(s)	510, 1124, 1544, 1762
Alw21I	GWGCWC	1 cut(s)	1764
Alw26I	GTCTC	2 cut(s)	378, 1656
Ama87I	CYCGRG	2 cut(s)	411, 1545
AoxI	GGCC	1 cut(s)	1017
ApeKI	GCWGC	3 cut(s)	363, 366, 1518
ApoI	RAATTY	1 cut(s)	1847
AseI	ATTAAT	2 cut(s)	669, 1194
Asp700I	GAANNNNTTC	1 cut(s)	165
AspA2I	CCTAGG	1 cut(s)	536
AspLEI	GCGC	2 cut(s)	430, 1518
AspS9I	GGNCC	2 cut(s)	340, 1017
AsuHPI	GGTGA	9 cut(s)	76, 100, 221, 1016, 1054, 1126, 1646, 1757, 1789
AsuII	TTCGAA	1 cut(s)	575
AvaI	CYCGRG	2 cut(s)	411, 1545
AvaII	GGWCC	1 cut(s)	340
AvrII	CCTAGG	1 cut(s)	536
BaeGI	GKGCMC	1 cut(s)	412
BanII	GRGCYC	3 cut(s)	811, 1272, 1764
BauI	CACGAG	1 cut(s)	405
Bbv12I	GWGCWC	1 cut(s)	1764
BbvI	GCAGC	3 cut(s)	375, 378, 1505
BccI	CCATC	9 cut(s)	65, 113, 140, 219, 246, 980, 1033, 1400, 1453
BceAI	ACGGC	1 cut(s)	281
BciT130I	CCWGG	1 cut(s)	338
BcoDI	GTCTC	2 cut(s)	378, 1656
BfaI	CTAG	1 cut(s)	537
BfmI	CTRYAG	1 cut(s)	1519
BfoI	RGCGCY	1 cut(s)	1519
BfuAI	ACCTGC	1 cut(s)	1197
BglII	AGATCT	1 cut(s)	1378
BisI	GCNGC	5 cut(s)	312, 364, 367, 436, 1519
BlnI	CCTAGG	1 cut(s)	536
BlsI	GCNGC	5 cut(s)	313, 365, 368, 437, 1520
Bme1390I	CCNGG	1 cut(s)	338
Bme18I	GGWCC	1 cut(s)	340
BmeT110I	CYCGRG	2 cut(s)	411, 1545
BmgT120I	GGNCC	2 cut(s)	340, 1017
BmiI	GGNNCC	1 cut(s)	1164
BmrFI	CCNGG	1 cut(s)	338
BmsI	GCATC	2 cut(s)	1159, 1636
Bpu14I	TTCGAA	1 cut(s)	575
BpuEI	CTTGAG	1 cut(s)	1740
BsaAI	YACGTR	2 cut(s)	864, 1179
BsaHI	GRCGYC	1 cut(s)	438
BsaJI	CCNNGG	3 cut(s)	336, 358, 536
Bsc4I	CCNNNNNNNGG	1 cut(s)	1364
Bse1I	ACTGG	1 cut(s)	152
Bse3DI	GCAATG	1 cut(s)	369
BseBI	CCWGG	1 cut(s)	338
BseDI	CCNNGG	3 cut(s)	336, 358, 536
BseGI	GGATG	6 cut(s)	57, 132, 248, 891, 1289, 1564
BseLI	CCNNNNNNNGG	1 cut(s)	1364
BseMI	GCAATG	1 cut(s)	369
BseMII	CTCAG	3 cut(s)	41, 64, 824
BseNI	ACTGG	1 cut(s)	152
BseRI	GAGGAG	4 cut(s)	113, 175, 347, 855
BseSI	GKGCMC	1 cut(s)	412
BseXI	GCAGC	3 cut(s)	375, 378, 1505
BseYI	CCCAGC	1 cut(s)	173
Bsh1236I	CGCG	1 cut(s)	1360
BshFI	GGCC	1 cut(s)	1019
BsiHKAI	GWGCWC	1 cut(s)	1764
BsiHKCI	CYCGRG	2 cut(s)	411, 1545
BslI	CCNNNNNNNGG	1 cut(s)	1364
BsmAI	GTCTC	2 cut(s)	378, 1656
BsmBI	CGTCTC	2 cut(s)	378, 1656
BsmI	GAATGC	1 cut(s)	1222
BsnI	GGCC	1 cut(s)	1019
BsoBI	CYCGRG	2 cut(s)	411, 1545
Bsp119I	TTCGAA	1 cut(s)	575
Bsp1286I	GDGCHC	4 cut(s)	412, 811, 1272, 1764
Bsp143I	GATC	4 cut(s)	816, 1006, 1378, 1747
BspACI	CCGC	5 cut(s)	170, 268, 312, 435, 1358
BspANI	GGCC	1 cut(s)	1019
BspCNI	CTCAG	3 cut(s)	40, 63, 823
BspFNI	CGCG	1 cut(s)	1360
BspHI	TCATGA	3 cut(s)	663, 1090, 1868
BspLI	GGNNCC	1 cut(s)	1164
BspMAI	CTGCAG	1 cut(s)	1523
BspMI	ACCTGC	1 cut(s)	1197
BspT104I	TTCGAA	1 cut(s)	575
BsrDI	GCAATG	1 cut(s)	369
BsrI	ACTGG	1 cut(s)	152
BssECI	CCNNGG	3 cut(s)	336, 358, 536
BssMI	GATC	4 cut(s)	816, 1006, 1378, 1747
BssNI	GRCGYC	1 cut(s)	438
BssSI	CACGAG	1 cut(s)	405
BssT1I	CCWWGG	1 cut(s)	536
Bst2BI	CACGAG	1 cut(s)	405
Bst2UI	CCWGG	1 cut(s)	338
Bst4CI	ACNGT	3 cut(s)	751, 1025, 1066
Bst6I	CTCTTC	6 cut(s)	473, 790, 1143, 1313, 1562, 1567
BstACI	GRCGYC	1 cut(s)	438
BstBAI	YACGTR	2 cut(s)	864, 1179
BstBI	TTCGAA	1 cut(s)	575
BstC8I	GCNNGC	3 cut(s)	402, 466, 1437
BstDEI	CTNAG	5 cut(s)	27, 50, 543, 810, 1275
BstF5I	GGATG	6 cut(s)	57, 132, 248, 891, 1289, 1564
BstFNI	CGCG	1 cut(s)	1360
BstH2I	RGCGCY	1 cut(s)	1519
BstHHI	GCGC	2 cut(s)	430, 1518
BstKTI	GATC	4 cut(s)	819, 1009, 1381, 1750
BstMAI	GTCTC	2 cut(s)	378, 1656
BstMBI	GATC	4 cut(s)	816, 1006, 1378, 1747
BstMWI	GCNNNNNNNGC	4 cut(s)	308, 491, 687, 1226
BstNI	CCWGG	1 cut(s)	338
BstNSI	RCATGY	1 cut(s)	622
BstSCI	CCNGG	1 cut(s)	336
BstSFI	CTRYAG	1 cut(s)	1519
BstSLI	GKGCMC	1 cut(s)	412
BstSNI	TACGTA	1 cut(s)	1179
BstUI	CGCG	1 cut(s)	1360
BstV1I	GCAGC	3 cut(s)	375, 378, 1505
BstX2I	RGATCY	1 cut(s)	1378
BstYI	RGATCY	1 cut(s)	1378
BsuRI	GGCC	1 cut(s)	1019
BtsCI	GGATG	6 cut(s)	57, 132, 248, 891, 1289, 1564
BtsIMutI	CAGTG	2 cut(s)	145, 506
BveI	ACCTGC	1 cut(s)	1197
Cac8I	GCNNGC	3 cut(s)	402, 466, 1437
CciI	TCATGA	3 cut(s)	663, 1090, 1868
CfoI	GCGC	2 cut(s)	430, 1518
Cfr13I	GGNCC	2 cut(s)	340, 1017
CseI	GACGC	3 cut(s)	427, 500, 903
Csp6I	GTAC	2 cut(s)	651, 1705
CviAII	CATG	5 cut(s)	619, 664, 776, 1091, 1869
CviQI	GTAC	2 cut(s)	651, 1705
DdeI	CTNAG	5 cut(s)	27, 50, 543, 810, 1275
DpnI	GATC	4 cut(s)	818, 1008, 1380, 1749
DpnII	GATC	4 cut(s)	816, 1006, 1378, 1747
Eam1104I	CTCTTC	6 cut(s)	473, 790, 1143, 1313, 1562, 1567
EarI	CTCTTC	6 cut(s)	473, 790, 1143, 1313, 1562, 1567
EciI	GGCGGA	2 cut(s)	159, 257
Ecl136II	GAGCTC	1 cut(s)	1762
Eco105I	TACGTA	1 cut(s)	1179
Eco130I	CCWWGG	1 cut(s)	536
Eco24I	GRGCYC	3 cut(s)	811, 1272, 1764
Eco47I	GGWCC	1 cut(s)	340
Eco53kI	GAGCTC	1 cut(s)	1762
Eco57I	CTGAAG	1 cut(s)	368
Eco88I	CYCGRG	2 cut(s)	411, 1545
EcoICRI	GAGCTC	1 cut(s)	1762
EcoO109I	RGGNCCY	1 cut(s)	1017
EcoRII	CCWGG	1 cut(s)	336
EcoT14I	CCWWGG	1 cut(s)	536
EcoT38I	GRGCYC	3 cut(s)	811, 1272, 1764
ErhI	CCWWGG	1 cut(s)	536
Esp3I	CGTCTC	2 cut(s)	378, 1656
FaeI	CATG	5 cut(s)	622, 667, 779, 1094, 1872
FalI	AAGNNNNNCTT	4 cut(s)	1734, 1766, 1749, 1781
FatI	CATG	5 cut(s)	618, 663, 775, 1090, 1868
Fnu4HI	GCNGC	5 cut(s)	312, 364, 367, 436, 1519
FokI	GGATG	6 cut(s)	44, 119, 235, 898, 1276, 1571
FriOI	GRGCYC	3 cut(s)	811, 1272, 1764
Fsp4HI	GCNGC	5 cut(s)	312, 364, 367, 436, 1519
FspBI	CTAG	1 cut(s)	537
FspI	TGCGCA	1 cut(s)	429
GlaI	GCGC	2 cut(s)	429, 1517
GluI	GCNGC	5 cut(s)	312, 364, 367, 436, 1519
GsaI	CCCAGC	1 cut(s)	177
HaeII	RGCGCY	1 cut(s)	1519
HaeIII	GGCC	1 cut(s)	1019
HgaI	GACGC	3 cut(s)	427, 500, 903
HhaI	GCGC	2 cut(s)	430, 1518
Hin1I	GRCGYC	1 cut(s)	438
Hin1II	CATG	5 cut(s)	622, 667, 779, 1094, 1872
Hin6I	GCGC	2 cut(s)	428, 1516
HinP1I	GCGC	2 cut(s)	428, 1516
HincII	GTYRAC	1 cut(s)	1071
HindII	GTYRAC	1 cut(s)	1071
HinfI	GANTC	6 cut(s)	379, 395, 583, 854, 1087, 1865
HphI	GGTGA	9 cut(s)	76, 100, 221, 1016, 1054, 1126, 1646, 1757, 1789
Hpy166II	GTNNAC	4 cut(s)	80, 1071, 1619, 1628
Hpy188I	TCNGA	7 cut(s)	30, 53, 378, 813, 957, 1661, 1821
Hpy8I	GTNNAC	4 cut(s)	80, 1071, 1619, 1628
Hpy99I	CGWCG	3 cut(s)	302, 443, 1066
HpyCH4III	ACNGT	3 cut(s)	751, 1025, 1066
HpyCH4IV	ACGT	4 cut(s)	387, 863, 1178, 1703
HpyCH4V	TGCA	8 cut(s)	681, 996, 1206, 1220, 1439, 1510, 1521, 1731
HpyF10VI	GCNNNNNNNGC	4 cut(s)	308, 491, 687, 1226
HpyF3I	CTNAG	5 cut(s)	27, 50, 543, 810, 1275
HpySE526I	ACGT	4 cut(s)	387, 863, 1178, 1703
Hsp92I	GRCGYC	1 cut(s)	438
Hsp92II	CATG	5 cut(s)	622, 667, 779, 1094, 1872
HspAI	GCGC	2 cut(s)	428, 1516
Kzo9I	GATC	4 cut(s)	816, 1006, 1378, 1747
LmnI	GCTCC	3 cut(s)	379, 1432, 1767
Lsp1109I	GCAGC	3 cut(s)	375, 378, 1505
LweI	GCATC	2 cut(s)	1159, 1636
MaeI	CTAG	1 cut(s)	537
MaeII	ACGT	4 cut(s)	387, 863, 1178, 1703
MaeIII	GTNAC	5 cut(s)	521, 754, 964, 1489, 1598
MalI	GATC	4 cut(s)	818, 1008, 1380, 1749
MboI	GATC	4 cut(s)	816, 1006, 1378, 1747
MboII	GAAGA	8 cut(s)	490, 807, 1057, 1160, 1330, 1363, 1579, 1584
MflI	RGATCY	1 cut(s)	1378
MhlI	GDGCHC	4 cut(s)	412, 811, 1272, 1764
MlyI	GAGTC	1 cut(s)	389
MmeI	TCCRAC	2 cut(s)	781, 1715
MroXI	GAANNNNTTC	1 cut(s)	165
MspR9I	CCNGG	1 cut(s)	338
Mva1269I	GAATGC	1 cut(s)	1222
MvaI	CCWGG	1 cut(s)	338
MvnI	CGCG	1 cut(s)	1360
MwoI	GCNNNNNNNGC	4 cut(s)	308, 491, 687, 1226
NdeII	GATC	4 cut(s)	816, 1006, 1378, 1747
NlaIII	CATG	5 cut(s)	622, 667, 779, 1094, 1872
NlaIV	GGNNCC	1 cut(s)	1164
NmeAIII	GCCGAG	1 cut(s)	339
NmuCI	GTSAC	2 cut(s)	521, 1489
NsbI	TGCGCA	1 cut(s)	429
NspI	RCATGY	1 cut(s)	622
NspV	TTCGAA	1 cut(s)	575
PagI	TCATGA	3 cut(s)	663, 1090, 1868
PciI	ACATGT	1 cut(s)	618
PctI	GAATGC	1 cut(s)	1222
PdmI	GAANNNNTTC	1 cut(s)	165
PfeI	GAWTC	5 cut(s)	379, 583, 854, 1087, 1865
PflFI	GACNNNGTC	1 cut(s)	1066
PkrI	GCNGC	5 cut(s)	313, 365, 368, 437, 1520
PleI	GAGTC	1 cut(s)	389
PpsI	GAGTC	1 cut(s)	389
Ppu21I	YACGTR	2 cut(s)	864, 1179
PscI	ACATGT	1 cut(s)	618
PshBI	ATTAAT	2 cut(s)	669, 1194
PsiI	TTATAA	3 cut(s)	762, 972, 1718
Psp124BI	GAGCTC	1 cut(s)	1764
Psp6I	CCWGG	1 cut(s)	336
PspFI	CCCAGC	1 cut(s)	173
PspGI	CCWGG	1 cut(s)	336
PspN4I	GGNNCC	1 cut(s)	1164
PspPI	GGNCC	2 cut(s)	340, 1017
PstI	CTGCAG	1 cut(s)	1523
PsuI	RGATCY	1 cut(s)	1378
PsyI	GACNNNGTC	1 cut(s)	1066
RsaI	GTAC	2 cut(s)	652, 1706
RsaNI	GTAC	2 cut(s)	651, 1705
SacI	GAGCTC	1 cut(s)	1764
SatI	GCNGC	5 cut(s)	312, 364, 367, 436, 1519
Sau3AI	GATC	4 cut(s)	816, 1006, 1378, 1747
Sau96I	GGNCC	2 cut(s)	340, 1017
SchI	GAGTC	1 cut(s)	389
ScrFI	CCNGG	1 cut(s)	338
SduI	GDGCHC	4 cut(s)	412, 811, 1272, 1764
SfaNI	GCATC	2 cut(s)	1159, 1636
SfcI	CTRYAG	1 cut(s)	1519
SfuI	TTCGAA	1 cut(s)	575
SinI	GGWCC	1 cut(s)	340
SmlI	CTYRAG	1 cut(s)	1755
SmoI	CTYRAG	1 cut(s)	1755
SnaBI	TACGTA	1 cut(s)	1179
SsiI	CCGC	5 cut(s)	170, 268, 312, 435, 1358
SspMI	CTAG	1 cut(s)	537
SstI	GAGCTC	1 cut(s)	1764
StyD4I	CCNGG	1 cut(s)	336
StyI	CCWWGG	1 cut(s)	536
TaaI	ACNGT	3 cut(s)	751, 1025, 1066
TaiI	ACGT	4 cut(s)	390, 866, 1181, 1706
TaqI	TCGA	9 cut(s)	159, 258, 273, 279, 382, 393, 575, 586, 641
TatI	WGTACW	1 cut(s)	650
TauI	GCSGC	2 cut(s)	314, 438
TfiI	GAWTC	5 cut(s)	379, 583, 854, 1087, 1865
TscAI	CASTG	2 cut(s)	152, 506
TseFI	GTSAC	2 cut(s)	521, 1489
TseI	GCWGC	3 cut(s)	363, 366, 1518
Tsp45I	GTSAC	2 cut(s)	521, 1489
TspRI	CASTG	2 cut(s)	152, 506
Tth111I	GACNNNGTC	1 cut(s)	1066
VpaK11BI	GGWCC	1 cut(s)	340
VspI	ATTAAT	2 cut(s)	669, 1194
XapI	RAATTY	1 cut(s)	1847
XceI	RCATGY	1 cut(s)	622
XmaJI	CCTAGG	1 cut(s)	536
XmnI	GAANNNNTTC	1 cut(s)	165
XspI	CTAG	1 cut(s)	537

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.