Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000571

Physical Location & Seq

Genomic Coordinates Reverse (-)

15130293 .. 15136746

Gene Structure 6454 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ23310

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1875 bp

ATGAAATCTCACAAACTCCTAAACCCTCAGACCCTTAAACCCCAAAATCTCAGACCCATCCAAACCCAATCTCTCTGTTCACTCACCCAACCAGACCCTCCTCCACCCATCACCCACCACTCTCTCCTCAACTCCATCCAAACTTGTCAGTGGCAATTCATCGAACACCTTCCCCCCAACCTTCCCTCCTCTCTAGTCTCCCAAACCCTCTTCCATCTCCACCAAACCCCTCACCTTGTCCATCAATTCACATCCCACATCGACTTTCTCCGCCTTGAAATCGAAACCCAATGCCTCGCTGTCGCCATTCTCGCCGCCCTGCCTTCCCCAAAATCCTCCCTGGGGCTCCTGAAGCAACTCGTCGGCAGCGGCATTGCTCCGATTCGAGACGTTTTCGACTCGCTGGCTCGTGCCCGAGTGCGTTTGGGTGCCCAAAGCGGCGTCGTTTTGGATTTGCTGGTAAGTGCTTGCTGTGAATTGAAGAGGGCTGATGACGCTTTTGAGTGCTTTAGCTTGATGACGAGTGACAATGTTATGCCTAGGACTAAGACTTGTAATGAATTGTTGAGTTTGTTTTCGAAATTGAATCGAACCGAGAGGGCTTGGGTTTTGTATGCTGACATGTTTAGGTTGAAAATCAAGTCCAGTGTTTGTACTTTTAACATCATGATTAATGTGTTGTGCAAAGAAGGCAAGTTAAAGAAGGCAAAGGAGTTTCTTGGGTTTATGGAGATTTTGGGGATTAAGCCTACTGTTGTTACTTATAATACTATCATTCATGGGTTTTGTTTGAGAGGAAGAGTTGGAGGGGCTCAGATGATCTTTAGTGCTATGAAAGGGAGAGGAGTTAAGCCAGATTCTTACACGTATGGATTGCTTATTAGTGGGATGTGTAAGGAGAGAAGGCTTGATGAAGCGTCTGGTCTTTTTGATAAAATGCTGGAAATTGGGTTGCTTCCGAGTGCTGTTACTTATAATACCCTGATTGATGGTTATTGCAATAAGGGTGATCTGGATAGGGCCTACGGTTATAGAGATGAGATGGTGAAGAAGGGTATAATGCCGACGGTGTCAACTTACAATTTGTTGATTCATGAATTGTTTATGGAAGGTAGGGTGAATGAAGCTGATTGTATGGTTAGAGAAATGGAAGAGAAGGGAATGGTTCCTGATGCCATTACGTATAATATCCTGATTAATGGCTATTGCAGGTCTGGGAATGCAAAGAAAGCGTTTATCCTTCACGATGAAATGTTGAGCAAAGGGATAGAGCCCACTAAGGAAACTTATACATCACTTATTTATGTTTTGAGTAAAAGGAAGAGAATGAATGAGGCAGATGACTTGTTTGAGAAGATACTGCGTAAGGGTGTTCTACCAGATCTTGTGATGTTCAATGCCTTGATTGATGGTCATTGTGCTAATGGGAATATGGAGCGTGCATTTTCGCTTTTGAGGGAGATGGATAAAATGAAGGTTAATCCAGATGAAGTCACTTACAATACCCTAATGCAAGGGCGCTGCAGGACAGGGAAAGTTGAGGACGCTCGGGAACTTCTGGATGAGATGAAGAGAAGAGGAATTAAGCCTGATTACATTAGTTACAACACCCTCATTAGTGGACATAGTAAACGAGGTGATATGAATGATGCCTTCAAAGTTCGAGACGAGATGTTGAGTAGAGGTTTCAATCCTACACTTCTAACTTACAATGCTCTTATAAAGGGTCTATGCAAAAACCAAGAAGGTGATCTTGCTCAAGAGCTCCTTAAAGAAATGGTGAGCAGAGGGATTACTCCCGATGACAGCACATATTACTCTCTGATTGAGGGAATTGAGAATGTTGAGGAATTTCTCAAAAAGGGCGATTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3 PPR_long

Protein Analysis

624

Amino Acids

70.35

Weight (kDa)

8.31

Isoelectric Point (pI)

32.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_long	PF17177	153 - 288	4.7e-07	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	181 - 229	2.7e-10	PPR repeat family
PPR_3	PF13812	204 - 260	4.2e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	214 - 244	1.1e-08	PPR repeat
PPR_2	PF13041	216 - 263	1.1e-14	PPR repeat family
PPR	PF01535	219 - 248	9.7e-06	PPR repeat
PPR_1	PF12854	247 - 279	2.8e-11	PPR repeat
PPR_2	PF13041	250 - 299	1.5e-17	PPR repeat family
PPR	PF01535	253 - 283	8.2e-06	PPR repeat
PPR_long	PF17177	273 - 365	5.7e-07	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	274 - 330	6.5e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	281 - 313	1e-11	PPR repeat
PPR	PF01535	288 - 318	8.1e-07	PPR repeat
PPR_2	PF13041	293 - 326	9.2e-07	PPR repeat family
PPR_3	PF13812	309 - 364	5.3e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	317 - 349	6.6e-12	PPR repeat
PPR_2	PF13041	320 - 367	6.2e-16	PPR repeat family
PPR	PF01535	323 - 353	4.5e-09	PPR repeat
PPR_1	PF12854	351 - 384	3.7e-06	PPR repeat
PPR_2	PF13041	355 - 404	3.3e-16	PPR repeat family
PPR_long	PF17177	374 - 438	3.4e-07	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	380 - 439	9.7e-10	Pentatricopeptide repeat domain
TPR_24	PF23276	383 - 446	2.9e-06	Fungal tetratrico peptide repeats
PPR_1	PF12854	386 - 418	7.7e-13	PPR repeat
PPR_2	PF13041	390 - 438	2.6e-16	PPR repeat family
PPR	PF01535	393 - 423	2.1e-09	PPR repeat
PPR_long	PF17177	430 - 545	1.2e-07	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	449 - 505	6.6e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	456 - 488	3.1e-11	PPR repeat
TPR_24	PF23276	457 - 554	1.1e-08	Fungal tetratrico peptide repeats
PPR_2	PF13041	460 - 508	1.5e-16	PPR repeat family
PPR	PF01535	463 - 492	2e-07	PPR repeat
PPR_1	PF12854	493 - 524	2.2e-11	PPR repeat
PPR_2	PF13041	495 - 541	1.1e-17	PPR repeat family
PPR	PF01535	498 - 528	3.7e-08	PPR repeat
PPR_long	PF17177	514 - 610	1.2e-07	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	519 - 576	3.1e-14	Pentatricopeptide repeat domain
PPR_1	PF12854	526 - 558	6.6e-10	PPR repeat
PPR_2	PF13041	530 - 579	1.2e-17	PPR repeat family
PPR	PF01535	533 - 563	9.3e-08	PPR repeat
PPR_1	PF12854	561 - 594	1.2e-08	PPR repeat
PPR_2	PF13041	565 - 611	4.4e-13	PPR repeat family
PPR	PF01535	569 - 598	3.1e-07	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0000571)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G15630
fragaria_vesca	FvH4_2g07360
malus_domestica	MD02G1234600.v1.1
prunus_persica	Prupe.8G019300_v2.0.a1
pyrus_communis	pycom02g20240 pycom05g06440 pycom10g06900
rosa_chinensis	RchiOBHm_Chr2g0106031 RchiOBHm_Chr2g0124301 RchiOBHm_Chr2g0124591 RchiOBHm_Chr5g0034701 RchiOBHm_Chr6g0257571 RchiOBHm_Chr6g0259961 RchiOBHm_Chr6g0260151 RchiOBHm_Chr6g0260161 RchiOBHm_Chr6g0260361 RchiOBHm_Chr6g0260391 RchiOBHm_Chr6g0260531 RchiOBHm_Chr6g0260541 RchiOBHm_Chr6g0260661 RchiOBHm_Chr6g0260761 RchiOBHm_Chr6g0266771 RchiOBHm_Chr7g0210581 RchiOBHm_Chr7g0225201 RchiOBHm_Chr7g0225221
rosa_laevigata	RLG00000001833 RLG00000001834 RLG00000014081 RLG00000014490 RLG00000014495 RLG00000015073 RLG00000034098
rosa_multiflora	Rmu_sc0000414.1_g000008 Rmu_sc0000546.1_g000067 Rmu_sc0000588.1_g000057 Rmu_sc0000861.1_g000058 Rmu_sc0000861.1_g000059 Rmu_sc0002766.1_g000023 Rmu_sc0002968.1_g000001 Rmu_sc0003786.1_g000024 Rmu_sc0005472.1_g000021 Rmu_sc0010278.1_g000006 Rmu_sc0014629.1_g000014 Rmu_sc0036189.1_g000001
rosa_roxburghii	Rroxscaffold_3G00234010 Rroxscaffold_5G00368980 Rroxscaffold_7G00201460 Rroxscaffold_7G00207310 Rroxscaffold_7G00207360 Rroxscaffold_7G00207370 Rroxscaffold_7G00210730
rosa_rugosa	Rorug05G0196300 Rorug05G0359600 Rorug05G0591800 Rorug05G0592300 Rorug05G0592700 Rorug06G0023500 Rorug07G0228100
rosa_samantha	Rh2CG188200 Rh2DG333800 Rh4DG026900 Rh5CG249600 Rh6BG104200 Rh6BG104500 Rh6BG105900 Rh6BG106000 Rh6CG076700 Rh6CG097500 Rh6CG098200 Rh6CG100800 Rh6CG101000 Rh6CG101200 Rh6CG102400 Rh6CG144100 Rh6DG093200 Rh7AG375200 Rh7AG375300 Rh7BG360300
rosa_wichuraiana	Rw0G020720 Rw5G026430 Rw6G009370 Rw6G009450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	765, 975, 1721
Acc36I	ACCTGC	1 cut(s)	1200
AccB1I	GGYRCC	1 cut(s)	428
AciI	CCGC	4 cut(s)	271, 315, 369, 438
AcsI	RAATTY	1 cut(s)	1850
AcuI	CTGAAG	1 cut(s)	371
AcyI	GRCGYC	1 cut(s)	441
AfaI	GTAC	1 cut(s)	655
AfiI	CCNNNNNNNGG	1 cut(s)	342
AflIII	ACRYGT	2 cut(s)	621, 864
AgsI	TTSAA	7 cut(s)	278, 481, 586, 634, 1396, 1657, 1690
AjnI	CCWGG	1 cut(s)	339
AluBI	AGCT	3 cut(s)	513, 1127, 1765
AluI	AGCT	3 cut(s)	513, 1127, 1765
Alw21I	GWGCWC	1 cut(s)	1767
Alw26I	GTCTC	3 cut(s)	202, 381, 1659
Ama87I	CYCGRG	2 cut(s)	414, 1548
AoxI	GGCC	1 cut(s)	1020
ApeKI	GCWGC	2 cut(s)	366, 1521
ApoI	RAATTY	1 cut(s)	1850
AseI	ATTAAT	2 cut(s)	672, 1197
Asp700I	GAANNNNTTC	1 cut(s)	168
AspA2I	CCTAGG	1 cut(s)	539
AspLEI	GCGC	1 cut(s)	1521
AspS9I	GGNCC	1 cut(s)	1020
AsuHPI	GGTGA	9 cut(s)	76, 103, 224, 1019, 1057, 1129, 1649, 1760, 1792
AsuII	TTCGAA	1 cut(s)	578
AvaI	CYCGRG	2 cut(s)	414, 1548
AvrII	CCTAGG	1 cut(s)	539
BaeGI	GKGCMC	2 cut(s)	415, 433
BanI	GGYRCC	1 cut(s)	428
BanII	GRGCYC	4 cut(s)	348, 814, 1275, 1767
BauI	CACGAG	1 cut(s)	408
Bbv12I	GWGCWC	1 cut(s)	1767
BbvI	GCAGC	2 cut(s)	378, 1508
BccI	CCATC	9 cut(s)	65, 116, 143, 222, 249, 983, 1036, 1403, 1456
BciT130I	CCWGG	1 cut(s)	341
BcoDI	GTCTC	3 cut(s)	202, 381, 1659
BfaI	CTAG	2 cut(s)	194, 540
BfmI	CTRYAG	1 cut(s)	1522
BfoI	RGCGCY	1 cut(s)	1522
BfuAI	ACCTGC	1 cut(s)	1200
BglII	AGATCT	1 cut(s)	1381
BisI	GCNGC	5 cut(s)	315, 367, 370, 439, 1522
BlnI	CCTAGG	1 cut(s)	539
BlsI	GCNGC	5 cut(s)	316, 368, 371, 440, 1523
Bme1390I	CCNGG	1 cut(s)	341
BmeT110I	CYCGRG	2 cut(s)	414, 1548
BmgT120I	GGNCC	1 cut(s)	1020
BmiI	GGNNCC	3 cut(s)	347, 430, 1167
BmrFI	CCNGG	1 cut(s)	341
BmsI	GCATC	2 cut(s)	1162, 1639
Bpu14I	TTCGAA	1 cut(s)	578
BpuEI	CTTGAG	1 cut(s)	1743
BsaAI	YACGTR	2 cut(s)	867, 1182
BsaHI	GRCGYC	1 cut(s)	441
BsaJI	CCNNGG	3 cut(s)	339, 340, 539
BsaXI	ACNNNNNCTCC	2 cut(s)	170, 200
Bsc4I	CCNNNNNNNGG	1 cut(s)	342
Bse1I	ACTGG	1 cut(s)	645
Bse3DI	GCAATG	1 cut(s)	372
BseBI	CCWGG	1 cut(s)	341
BseDI	CCNNGG	3 cut(s)	339, 340, 539
BseGI	GGATG	5 cut(s)	57, 135, 251, 894, 1567
BseLI	CCNNNNNNNGG	1 cut(s)	342
BseMI	GCAATG	1 cut(s)	372
BseMII	CTCAG	3 cut(s)	41, 64, 827
BseNI	ACTGG	1 cut(s)	645
BseRI	GAGGAG	4 cut(s)	90, 116, 178, 858
BseSI	GKGCMC	2 cut(s)	415, 433
BseXI	GCAGC	2 cut(s)	378, 1508
BshFI	GGCC	1 cut(s)	1022
BshNI	GGYRCC	1 cut(s)	428
BsiHKAI	GWGCWC	1 cut(s)	1767
BsiHKCI	CYCGRG	2 cut(s)	414, 1548
BslI	CCNNNNNNNGG	1 cut(s)	342
BsmAI	GTCTC	3 cut(s)	202, 381, 1659
BsmBI	CGTCTC	2 cut(s)	381, 1659
BsmI	GAATGC	1 cut(s)	1225
BsnI	GGCC	1 cut(s)	1022
BsoBI	CYCGRG	2 cut(s)	414, 1548
Bsp119I	TTCGAA	1 cut(s)	578
Bsp1286I	GDGCHC	6 cut(s)	348, 415, 433, 814, 1275, 1767
Bsp143I	GATC	4 cut(s)	819, 1009, 1381, 1750
BspACI	CCGC	4 cut(s)	271, 315, 369, 438
BspANI	GGCC	1 cut(s)	1022
BspCNI	CTCAG	3 cut(s)	40, 63, 826
BspHI	TCATGA	3 cut(s)	666, 1093, 1871
BspLI	GGNNCC	3 cut(s)	347, 430, 1167
BspMAI	CTGCAG	1 cut(s)	1526
BspMI	ACCTGC	1 cut(s)	1200
BspT104I	TTCGAA	1 cut(s)	578
BspT107I	GGYRCC	1 cut(s)	428
BsrDI	GCAATG	1 cut(s)	372
BsrI	ACTGG	1 cut(s)	645
BssECI	CCNNGG	3 cut(s)	339, 340, 539
BssMI	GATC	4 cut(s)	819, 1009, 1381, 1750
BssNI	GRCGYC	1 cut(s)	441
BssSI	CACGAG	1 cut(s)	408
BssT1I	CCWWGG	1 cut(s)	539
Bst2BI	CACGAG	1 cut(s)	408
Bst2UI	CCWGG	1 cut(s)	341
Bst4CI	ACNGT	3 cut(s)	754, 1028, 1069
Bst6I	CTCTTC	7 cut(s)	215, 476, 793, 1146, 1316, 1565, 1570
BstACI	GRCGYC	1 cut(s)	441
BstBAI	YACGTR	2 cut(s)	867, 1182
BstBI	TTCGAA	1 cut(s)	578
BstC8I	GCNNGC	3 cut(s)	405, 469, 1440
BstDEI	CTNAG	5 cut(s)	27, 50, 546, 813, 1278
BstF5I	GGATG	5 cut(s)	57, 135, 251, 894, 1567
BstH2I	RGCGCY	1 cut(s)	1522
BstHHI	GCGC	1 cut(s)	1521
BstKTI	GATC	4 cut(s)	822, 1012, 1384, 1753
BstMAI	GTCTC	3 cut(s)	202, 381, 1659
BstMBI	GATC	4 cut(s)	819, 1009, 1381, 1750
BstMWI	GCNNNNNNNGC	5 cut(s)	311, 352, 494, 690, 1229
BstNI	CCWGG	1 cut(s)	341
BstNSI	RCATGY	1 cut(s)	625
BstSCI	CCNGG	1 cut(s)	339
BstSFI	CTRYAG	1 cut(s)	1522
BstSLI	GKGCMC	2 cut(s)	415, 433
BstSNI	TACGTA	1 cut(s)	1182
BstV1I	GCAGC	2 cut(s)	378, 1508
BstX2I	RGATCY	1 cut(s)	1381
BstYI	RGATCY	1 cut(s)	1381
BsuRI	GGCC	1 cut(s)	1022
BtsCI	GGATG	5 cut(s)	57, 135, 251, 894, 1567
BtsIMutI	CAGTG	2 cut(s)	155, 652
BveI	ACCTGC	1 cut(s)	1200
Cac8I	GCNNGC	3 cut(s)	405, 469, 1440
CciI	TCATGA	3 cut(s)	666, 1093, 1871
CfoI	GCGC	1 cut(s)	1521
Cfr13I	GGNCC	1 cut(s)	1020
CseI	GACGC	4 cut(s)	430, 503, 906, 1553
Csp6I	GTAC	1 cut(s)	654
CviAII	CATG	5 cut(s)	622, 667, 779, 1094, 1872
CviQI	GTAC	1 cut(s)	654
DdeI	CTNAG	5 cut(s)	27, 50, 546, 813, 1278
DpnI	GATC	4 cut(s)	821, 1011, 1383, 1752
DpnII	GATC	4 cut(s)	819, 1009, 1381, 1750
Eam1104I	CTCTTC	7 cut(s)	215, 476, 793, 1146, 1316, 1565, 1570
EarI	CTCTTC	7 cut(s)	215, 476, 793, 1146, 1316, 1565, 1570
EciI	GGCGGA	1 cut(s)	260
Ecl136II	GAGCTC	1 cut(s)	1765
Eco105I	TACGTA	1 cut(s)	1182
Eco130I	CCWWGG	1 cut(s)	539
Eco24I	GRGCYC	4 cut(s)	348, 814, 1275, 1767
Eco53kI	GAGCTC	1 cut(s)	1765
Eco57I	CTGAAG	1 cut(s)	371
Eco88I	CYCGRG	2 cut(s)	414, 1548
EcoICRI	GAGCTC	1 cut(s)	1765
EcoO109I	RGGNCCY	1 cut(s)	1020
EcoRII	CCWGG	1 cut(s)	339
EcoT14I	CCWWGG	1 cut(s)	539
EcoT38I	GRGCYC	4 cut(s)	348, 814, 1275, 1767
ErhI	CCWWGG	1 cut(s)	539
Esp3I	CGTCTC	2 cut(s)	381, 1659
FaeI	CATG	5 cut(s)	625, 670, 782, 1097, 1875
FalI	AAGNNNNNCTT	4 cut(s)	1737, 1769, 1752, 1784
FatI	CATG	5 cut(s)	621, 666, 778, 1093, 1871
Fnu4HI	GCNGC	5 cut(s)	315, 367, 370, 439, 1522
FokI	GGATG	5 cut(s)	44, 122, 238, 901, 1574
FriOI	GRGCYC	4 cut(s)	348, 814, 1275, 1767
Fsp4HI	GCNGC	5 cut(s)	315, 367, 370, 439, 1522
FspBI	CTAG	2 cut(s)	194, 540
GlaI	GCGC	1 cut(s)	1520
GluI	GCNGC	5 cut(s)	315, 367, 370, 439, 1522
HaeII	RGCGCY	1 cut(s)	1522
HaeIII	GGCC	1 cut(s)	1022
HgaI	GACGC	4 cut(s)	430, 503, 906, 1553
HhaI	GCGC	1 cut(s)	1521
Hin1I	GRCGYC	1 cut(s)	441
Hin1II	CATG	5 cut(s)	625, 670, 782, 1097, 1875
Hin6I	GCGC	1 cut(s)	1519
HinP1I	GCGC	1 cut(s)	1519
HincII	GTYRAC	1 cut(s)	1074
HindII	GTYRAC	1 cut(s)	1074
HinfI	GANTC	6 cut(s)	382, 398, 586, 857, 1090, 1868
HphI	GGTGA	9 cut(s)	76, 103, 224, 1019, 1057, 1129, 1649, 1760, 1792
Hpy166II	GTNNAC	4 cut(s)	80, 1074, 1622, 1631
Hpy188I	TCNGA	6 cut(s)	30, 53, 381, 816, 960, 1824
Hpy8I	GTNNAC	4 cut(s)	80, 1074, 1622, 1631
Hpy99I	CGWCG	3 cut(s)	365, 446, 1069
HpyCH4III	ACNGT	3 cut(s)	754, 1028, 1069
HpyCH4IV	ACGT	3 cut(s)	390, 866, 1181
HpyCH4V	TGCA	8 cut(s)	684, 999, 1209, 1223, 1442, 1513, 1524, 1734
HpyF10VI	GCNNNNNNNGC	5 cut(s)	311, 352, 494, 690, 1229
HpyF3I	CTNAG	5 cut(s)	27, 50, 546, 813, 1278
HpySE526I	ACGT	3 cut(s)	390, 866, 1181
Hsp92I	GRCGYC	1 cut(s)	441
Hsp92II	CATG	5 cut(s)	625, 670, 782, 1097, 1875
HspAI	GCGC	1 cut(s)	1519
Kzo9I	GATC	4 cut(s)	819, 1009, 1381, 1750
LmnI	GCTCC	4 cut(s)	351, 382, 1435, 1770
Lsp1109I	GCAGC	2 cut(s)	378, 1508
LweI	GCATC	2 cut(s)	1162, 1639
MaeI	CTAG	2 cut(s)	194, 540
MaeII	ACGT	3 cut(s)	390, 866, 1181
MaeIII	GTNAC	5 cut(s)	524, 757, 967, 1492, 1601
MalI	GATC	4 cut(s)	821, 1011, 1383, 1752
MboI	GATC	4 cut(s)	819, 1009, 1381, 1750
MboII	GAAGA	9 cut(s)	202, 493, 810, 1060, 1163, 1333, 1366, 1582, 1587
MflI	RGATCY	1 cut(s)	1381
MhlI	GDGCHC	6 cut(s)	348, 415, 433, 814, 1275, 1767
MlyI	GAGTC	1 cut(s)	392
MmeI	TCCRAC	1 cut(s)	784
MroXI	GAANNNNTTC	1 cut(s)	168
MspA1I	CMGCKG	1 cut(s)	369
MspR9I	CCNGG	1 cut(s)	341
Mva1269I	GAATGC	1 cut(s)	1225
MvaI	CCWGG	1 cut(s)	341
MwoI	GCNNNNNNNGC	5 cut(s)	311, 352, 494, 690, 1229
NdeII	GATC	4 cut(s)	819, 1009, 1381, 1750
NlaIII	CATG	5 cut(s)	625, 670, 782, 1097, 1875
NlaIV	GGNNCC	3 cut(s)	347, 430, 1167
NmuCI	GTSAC	2 cut(s)	524, 1492
NspI	RCATGY	1 cut(s)	625
NspV	TTCGAA	1 cut(s)	578
PagI	TCATGA	3 cut(s)	666, 1093, 1871
PasI	CCCWGGG	1 cut(s)	340
PciI	ACATGT	1 cut(s)	621
PctI	GAATGC	1 cut(s)	1225
PdmI	GAANNNNTTC	1 cut(s)	168
PfeI	GAWTC	5 cut(s)	382, 586, 857, 1090, 1868
PflFI	GACNNNGTC	1 cut(s)	1069
PkrI	GCNGC	5 cut(s)	316, 368, 371, 440, 1523
PleI	GAGTC	1 cut(s)	392
PpsI	GAGTC	1 cut(s)	392
Ppu21I	YACGTR	2 cut(s)	867, 1182
PscI	ACATGT	1 cut(s)	621
PshBI	ATTAAT	2 cut(s)	672, 1197
PsiI	TTATAA	3 cut(s)	765, 975, 1721
Psp124BI	GAGCTC	1 cut(s)	1767
Psp6I	CCWGG	1 cut(s)	339
PspGI	CCWGG	1 cut(s)	339
PspN4I	GGNNCC	3 cut(s)	347, 430, 1167
PspPI	GGNCC	1 cut(s)	1020
PstI	CTGCAG	1 cut(s)	1526
PsuI	RGATCY	1 cut(s)	1381
PsyI	GACNNNGTC	1 cut(s)	1069
RsaI	GTAC	1 cut(s)	655
RsaNI	GTAC	1 cut(s)	654
SacI	GAGCTC	1 cut(s)	1767
SatI	GCNGC	5 cut(s)	315, 367, 370, 439, 1522
Sau3AI	GATC	4 cut(s)	819, 1009, 1381, 1750
Sau96I	GGNCC	1 cut(s)	1020
SchI	GAGTC	1 cut(s)	392
ScrFI	CCNGG	1 cut(s)	341
SduI	GDGCHC	6 cut(s)	348, 415, 433, 814, 1275, 1767
SfaNI	GCATC	2 cut(s)	1162, 1639
SfcI	CTRYAG	1 cut(s)	1522
SfuI	TTCGAA	1 cut(s)	578
SmlI	CTYRAG	1 cut(s)	1758
SmoI	CTYRAG	1 cut(s)	1758
SnaBI	TACGTA	1 cut(s)	1182
SsiI	CCGC	4 cut(s)	271, 315, 369, 438
SspMI	CTAG	2 cut(s)	194, 540
SstI	GAGCTC	1 cut(s)	1767
StyD4I	CCNGG	1 cut(s)	339
StyI	CCWWGG	1 cut(s)	539
TaaI	ACNGT	3 cut(s)	754, 1028, 1069
TaiI	ACGT	3 cut(s)	393, 869, 1184
TaqI	TCGA	8 cut(s)	162, 261, 282, 385, 396, 578, 589, 1663
TatI	WGTACW	1 cut(s)	653
TauI	GCSGC	3 cut(s)	317, 372, 441
TfiI	GAWTC	5 cut(s)	382, 586, 857, 1090, 1868
TscAI	CASTG	2 cut(s)	155, 652
TseFI	GTSAC	2 cut(s)	524, 1492
TseI	GCWGC	2 cut(s)	366, 1521
Tsp45I	GTSAC	2 cut(s)	524, 1492
TspRI	CASTG	2 cut(s)	155, 652
Tth111I	GACNNNGTC	1 cut(s)	1069
VspI	ATTAAT	2 cut(s)	672, 1197
XapI	RAATTY	1 cut(s)	1850
XceI	RCATGY	1 cut(s)	625
XmaJI	CCTAGG	1 cut(s)	539
XmnI	GAANNNNTTC	1 cut(s)	168
XspI	CTAG	2 cut(s)	194, 540

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.