FvH4_4g03300

Belongs to the iron ascorbate-dependent oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000054
Physical Location & Seq
Forward (+)
2913177 .. 2915415
2239 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g03300.t1

Sequence Viewer

Length: 1209 bp
ATGGAGCAAAGGCCACACAAGTATAAAATATGTTTTTGTCTTCTGCTCCGAGCCTTGCACTACTCTTTAATCTATAATCTCTTGCTTGTTACCACCAATTATTATGACTTGCAAACCCAGAAGAAAACGGTGGACACAAGTGACCGCACAAGTGAACTAAAAGCATTTGATGATACAAAAGCCGGTGTGAAAGGACTACTCGATGCAGGAGTCAAAACAATCCCTCGCATTTTCCACTCCAGATCACAACCAAATGTTGATCAGAGGGAGGGAGGTGATGATGATGCCCGGTTCAGTATTCCAACCATCGATCTTCAAGGCGGCAAAATCCAAGCAGACTCAGCTTTACGAGCTGAGGTCATGGAGAAAGTTCGGCATGCGTGTGAGAAATGGGGTTTCTTTCAAGTAGTGAATCATGGAATTCCTGTAAATGTTTTGGATGAGGTGATTCGAGGGATACGCGAGTTCCATGAGCAGGATAGTGAGCTAAAGAAAGAGTTCTATACAAGGACTCCCGGGAAGAAAGTGTATTATCATTCTAACTATGATTTGTACCAAGCTTCATCAACTGACTGGAGAGACACACTTGGCTGTTTCATGGCTCCTAATCCACCCAAACCAGAAGAATTACCGTCAGTATGCAGAGATATAGTGATCGAGTACTCAAAGCATGTGATGGAGGTGGGATTAACATTGTTCGAGATACTATCTGAGTCTCTTGGGCTTAATCCGAACCATCTCAAAGACATGAACTGCGCCGAGGGGCTTCTTCTTCTGGGTCACTGCTATCCAGCATGCCCTGAACCAGACTTGACTTTCGGCGCCAGCAAGCACACTGATGGTACTTTCATCACCATTCTCTTGCAAGACCAAGTAGGCGGTCTCCAAGCTTTGTATGAGAATCAATGGGTTAATGTTCCCCCCATGTATGGGGCTCTAGTTGTCAATGTTGGAGACCTTCTTCAGCTCATAACAAATGACAAGTTTATTAGCTTGGCTCACAGAGTTAGAGCGAAGAATGTAGGGCCAAGAACATCTGTGGCAAGCTTTTTCAGATCTGAGCGGAACACAAAAGTTTTCGGACCAATTAAGGAGTTGTTATCAGAAGAGAACCCCCAAATCTACCAAGAAGTTGATATTAAAGATTATGTCAGGTACTACTACTCAGAAGGGAAGGAGAACTCCCCATTACTACATTTCAAGCTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2OG-FeII_Oxy DIOX_N

Protein Analysis

403

Amino Acids

45.8

Weight (kDa)

6.03

Isoelectric Point (pI)

34.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 100 - 202 1.2e-20 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 258 - 352 7e-28 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000054)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03400 AT1G03400 AT1G03410 AT1G03410 AT1G04350 AT1G06620 AT1G06620 AT1G06640 AT1G06640 AT1G06640 AT1G06645 AT1G06650 AT1G06650 AT2G25450 AT2G30830 AT2G30840 AT2G30840 AT2G30840 AT3G61400 AT3G61400 AT5G43440 AT5G43440 AT5G43450 AT5G43450 AT5G59530 AT5G59540 AT5G59540
fragaria_vesca FvH4_2g03190 FvH4_2g03220 FvH4_3g07861 FvH4_3g31880 FvH4_3g31880 FvH4_3g31880 FvH4_4g03241 FvH4_4g03250 FvH4_4g03251 FvH4_4g03260 FvH4_4g03300 FvH4_4g03301 FvH4_4g03301 FvH4_4g03301 FvH4_4g03302 FvH4_4g03303 FvH4_4g03303 FvH4_4g03304 FvH4_4g03305 FvH4_4g03323 FvH4_4g03323 FvH4_5g19290 FvH4_5g19290 FvH4_5g19290 FvH4_5g19291 FvH4_5g19291 FvH4_5g19310 FvH4_5g19310 FvH4_5g19310 FvH4_5g19320 FvH4_5g19321 FvH4_5g19321 FvH4_5g19321 FvH4_7g31470
malus_domestica MD00G1220300.v1.1 MD02G1050800.v1.1 MD02G1053200.v1.1 MD02G1053300.v1.1 MD02G1054900.v1.1 MD03G1032300.v1.1 MD03G1245000.v1.1 MD03G1245300.v1.1 MD05G1014200.v1.1 MD13G1210900.v1.1 MD13G1211000.v1.1 MD13G1211100.v1.1 MD13G1211200.v1.1 MD13G1211800.v1.1 MD13G1211900.v1.1 MD13G1212000.v1.1 MD16G1214100.v1.1 MD16G1214300.v1.1 MD16G1214400.v1.1 MD16G1214600.v1.1 MD16G1215000.v1.1 MD16G1215200.v1.1 MD16G1215300.v1.1 MD16G1215500.v1.1 MD16G1271000.v1.1
prunus_persica Prupe.1G035500_v2.0.a1 Prupe.1G035700_v2.0.a1 Prupe.1G035800_v2.0.a1 Prupe.1G035900_v2.0.a1 Prupe.1G036000_v2.0.a1 Prupe.1G036100_v2.0.a1 Prupe.1G036200_v2.0.a1 Prupe.1G036400_v2.0.a1 Prupe.1G036500_v2.0.a1 Prupe.1G036600_v2.0.a1 Prupe.1G036700_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G191000_v2.0.a1 Prupe.1G191100_v2.0.a1
pyrus_communis pycom13g18340 pycom13g18350 pycom13g18380 pycom16g17990 pycom16g18010 pycom16g18020
rosa_chinensis RchiOBHm_Chr2g0124051 RchiOBHm_Chr4g0391811 RchiOBHm_Chr4g0391931 RchiOBHm_Chr4g0391961 RchiOBHm_Chr4g0391971 RchiOBHm_Chr4g0391981 RchiOBHm_Chr4g0391991 RchiOBHm_Chr4g0392031 RchiOBHm_Chr4g0392051 RchiOBHm_Chr4g0392061 RchiOBHm_Chr4g0392071 RchiOBHm_Chr4g0392081 RchiOBHm_Chr4g0392091 RchiOBHm_Chr4g0392111 RchiOBHm_Chr4g0392121 RchiOBHm_Chr4g0392131 RchiOBHm_Chr4g0392141 RchiOBHm_Chr4g0392151 RchiOBHm_Chr4g0392211 RchiOBHm_Chr4g0392251 RchiOBHm_Chr4g0392261 RchiOBHm_Chr4g0392301 RchiOBHm_Chr4g0392311 RchiOBHm_Chr4g0392341 RchiOBHm_Chr4g0409221 RchiOBHm_Chr4g0410991 RchiOBHm_Chr4g0429131 RchiOBHm_Chr4g0437051 RchiOBHm_Chr5g0038681 RchiOBHm_Chr5g0047071 RchiOBHm_Chr5g0058651 RchiOBHm_Chr6g0248121 RchiOBHm_Chr6g0248141 RchiOBHm_Chr6g0248291 RchiOBHm_Chr6g0248341 RchiOBHm_Chr6g0248351
rosa_laevigata RLG00000006473 RLG00000006475 RLG00000006667 RLG00000007095 RLG00000009819 RLG00000009820 RLG00000009821 RLG00000009822 RLG00000009825 RLG00000009826 RLG00000009830 RLG00000009831 RLG00000009832 RLG00000009833 RLG00000009834 RLG00000009835 RLG00000009837 RLG00000009838 RLG00000009839 RLG00000009841 RLG00000009842 RLG00000009844 RLG00000009845 RLG00000009846 RLG00000009847 RLG00000009848 RLG00000009849 RLG00000015160 RLG00000015161 RLG00000017791 RLG00000018779 RLG00000034461 RLG00000035237
rosa_multiflora Rmu_co8253791.1_g000001 Rmu_co8348827.1_g000001 Rmu_co8400489.1_g000001 Rmu_sc0000383.1_g000003 Rmu_sc0000383.1_g000005 Rmu_sc0000383.1_g000026 Rmu_sc0000846.1_g000012 Rmu_sc0001231.1_g000013 Rmu_sc0001231.1_g000026 Rmu_sc0001231.1_g000028 Rmu_sc0001800.1_g000027 Rmu_sc0003436.1_g000022 Rmu_sc0004104.1_g000004 Rmu_sc0004295.1_g000021 Rmu_sc0004295.1_g000031 Rmu_sc0004928.1_g000002 Rmu_sc0004928.1_g000008 Rmu_sc0004928.1_g000011 Rmu_sc0004928.1_g000027 Rmu_sc0004977.1_g000007 Rmu_sc0005018.1_g000002 Rmu_sc0005091.1_g000026 Rmu_sc0005091.1_g000032 Rmu_sc0005091.1_g000033 Rmu_sc0005817.1_g000003 Rmu_sc0005817.1_g000008 Rmu_sc0012482.1_g000002 Rmu_sc0014210.1_g000001 Rmu_sc0016150.1_g000001 Rmu_sc0029701.1_g000002 Rmu_sc0036585.1_g000001 Rmu_sc0037489.1_g000002
rosa_roxburghii Rroxscaffold_1G00021790 Rroxscaffold_1G00021800 Rroxscaffold_1G00034360 Rroxscaffold_2G00120130 Rroxscaffold_5G00337210 Rroxscaffold_5G00337220 Rroxscaffold_5G00337230 Rroxscaffold_5G00337250 Rroxscaffold_5G00337260 Rroxscaffold_5G00337270 Rroxscaffold_5G00337300 Rroxscaffold_5G00337310 Rroxscaffold_5G00337320 Rroxscaffold_5G00337330 Rroxscaffold_5G00337350 Rroxscaffold_5G00337370 Rroxscaffold_5G00337390 Rroxscaffold_5G00337400 Rroxscaffold_5G00337420 Rroxscaffold_5G00337430 Rroxscaffold_5G00337450 Rroxscaffold_5G00337470 Rroxscaffold_5G00337480 Rroxscaffold_5G00337520 Rroxscaffold_5G00378130 Rroxscaffold_6G00397800 Rroxscaffold_7G00213320 Rroxscaffold_7G00213390 Rroxscaffold_7G00213420 Rroxscaffold_7G00213470
rosa_rugosa Rorug02G0070100 Rorug02G0070100 Rorug02G0070100 Rorug02G0128600 Rorug02G0128700 Rorug02G0128800 Rorug02G0128900 Rorug02G0248400 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337100 Rorug03G0337200 Rorug03G0337300 Rorug03G0337600 Rorug03G0337700 Rorug03G0337800 Rorug03G0337900 Rorug03G0337900 Rorug03G0338000 Rorug03G0338100 Rorug03G0338200 Rorug04G0233200.1 Rorug04G0297900 Rorug05G0233700 Rorug05G0316700 Rorug05G0530800 Rorug05G0530900
rosa_samantha Rh2AG307400 Rh2BG316500 Rh2DG331200 Rh4AG039300 Rh4AG039400 Rh4AG039600 Rh4AG039700 Rh4AG039900 Rh4AG040000 Rh4AG040100 Rh4AG040300 Rh4AG040500 Rh4AG040700 Rh4AG041000 Rh4AG041100 Rh4AG041600 Rh4AG041800 Rh4AG041900 Rh4AG352400 Rh4BG033200 Rh4BG034100 Rh4BG034300 Rh4BG034700 Rh4BG034800 Rh4BG035200 Rh4BG035400 Rh4BG036000 Rh4BG036200 Rh4BG036300 Rh4BG036500 Rh4BG036800 Rh4BG361700 Rh4CG042000 Rh4CG042200 Rh4CG042300 Rh4CG042500 Rh4CG042600 Rh4CG042800 Rh4CG043200 Rh4CG043400 Rh4CG043500 Rh4CG043700 Rh4CG043800 Rh4CG044200 Rh4CG044500 Rh4CG044700 Rh4CG177000 Rh4CG310600 Rh4CG376000 Rh4DG036300 Rh4DG036900 Rh4DG037000 Rh4DG037100 Rh4DG037200 Rh4DG037300 Rh4DG037500 Rh4DG037700 Rh4DG037800 Rh4DG037900 Rh4DG038000 Rh4DG038200 Rh4DG038500 Rh4DG038700 Rh4DG038900 Rh4DG159600 Rh5CG347900 Rh5DG409900 Rh6AG045300 Rh6AG045800 Rh6AG046000 Rh6AG046100 Rh6BG040600 Rh6BG040700 Rh6BG042200 Rh6BG042700 Rh6BG042800 Rh6DG035900 Rh6DG036100 Rh6DG036200
rosa_wichuraiana Rw0G010420 Rw2G024780 Rw4G003020 Rw4G003070 Rw4G003080 Rw4G003090 Rw4G003100 Rw4G003130 Rw4G003140 Rw4G003150 Rw4G003180 Rw4G003190 Rw4G003200 Rw4G003210 Rw4G003220 Rw4G003240 Rw4G003270 Rw4G025050 Rw4G030850 Rw6G003930 Rw6G004000 Rw6G004030 Rw6G004040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 821
AccBSI CCGCTC 1 cut(s) 1063
AccII CGCG 1 cut(s) 462
AciI CCGC 4 cut(s) 145, 321, 879, 1063
AcsI RAATTY 1 cut(s) 420
AcuI CTGAAG 1 cut(s) 947
AcyI GRCGYC 1 cut(s) 822
AfaI GTAC 4 cut(s) 554, 662, 844, 1157
AfiI CCNNNNNNNGG 3 cut(s) 475, 929, 930
AgsI TTSAA 3 cut(s) 317, 404, 1201
AluBI AGCT 9 cut(s) 344, 353, 487, 560, 890, 967, 993, 1047, 1204
AluI AGCT 9 cut(s) 344, 353, 487, 560, 890, 967, 993, 1047, 1204
Alw26I GTCTC 4 cut(s) 573, 720, 887, 948
Ama87I CYCGRG 1 cut(s) 515
AoxI GGCC 2 cut(s) 11, 1025
ApoI RAATTY 1 cut(s) 420
ArsI GACNNNNNNTTYG 2 cut(s) 800, 832
Asp700I GAANNNNTTC 1 cut(s) 497
AspLEI GCGC 2 cut(s) 758, 824
AspS9I GGNCC 2 cut(s) 1025, 1082
AsuC2I CCSGG 3 cut(s) 289, 516, 517
AsuHPI GGTGA 3 cut(s) 287, 457, 844
AvaI CYCGRG 1 cut(s) 515
AvaII GGWCC 1 cut(s) 1082
BaeI ACNNNNGTAYC 2 cut(s) 449, 482
BanI GGYRCC 1 cut(s) 821
BanII GRGCYC 1 cut(s) 937
BbsI GAAGAC 1 cut(s) 32
BbvCI CCTCAGC 1 cut(s) 354
BccI CCATC 4 cut(s) 314, 670, 744, 833
BciVI GTATCC 1 cut(s) 450
BclI TGATCA 1 cut(s) 259
BcnI CCSGG 3 cut(s) 289, 516, 517
BcoDI GTCTC 4 cut(s) 573, 720, 887, 948
BfaI CTAG 1 cut(s) 938
BfoI RGCGCY 1 cut(s) 825
BfuI GTATCC 1 cut(s) 450
BglII AGATCT 1 cut(s) 1055
BisI GCNGC 1 cut(s) 322
BlsI GCNGC 1 cut(s) 323
BmcAI AGTACT 1 cut(s) 662
Bme1390I CCNGG 3 cut(s) 289, 516, 517
Bme18I GGWCC 1 cut(s) 1082
BmeT110I CYCGRG 1 cut(s) 515
BmgT120I GGNCC 2 cut(s) 1025, 1082
BmiI GGNNCC 2 cut(s) 603, 823
BmrFI CCNGG 3 cut(s) 289, 516, 517
BmsI GCATC 2 cut(s) 193, 274
BpiI GAAGAC 1 cut(s) 32
BpmI CTGGAG 2 cut(s) 223, 595
Bpu10I CCTNAGC 1 cut(s) 354
BpuMI CCSGG 3 cut(s) 289, 516, 517
Bsa29I ATCGAT 1 cut(s) 309
BsaHI GRCGYC 1 cut(s) 822
BsaI GGTCTC 2 cut(s) 887, 948
BsaJI CCNNGG 2 cut(s) 515, 759
BsaXI ACNNNNNCTCC 2 cut(s) 496, 526
Bsc4I CCNNNNNNNGG 3 cut(s) 475, 929, 930
Bse118I RCCGGY 1 cut(s) 182
Bse1I ACTGG 1 cut(s) 578
BseCI ATCGAT 1 cut(s) 309
BseDI CCNNGG 2 cut(s) 515, 759
BseGI GGATG 1 cut(s) 445
BseLI CCNNNNNNNGG 3 cut(s) 475, 929, 930
BseMII CTCAG 5 cut(s) 345, 354, 702, 1050, 1179
BseNI ACTGG 1 cut(s) 578
Bsh1236I CGCG 1 cut(s) 462
BshFI GGCC 2 cut(s) 13, 1027
BshNI GGYRCC 1 cut(s) 821
BshVI ATCGAT 1 cut(s) 309
BsiHKCI CYCGRG 1 cut(s) 515
BsiSI CCGG 3 cut(s) 183, 289, 516
BslI CCNNNNNNNGG 3 cut(s) 475, 929, 930
BsmAI GTCTC 4 cut(s) 573, 720, 887, 948
BsnI GGCC 2 cut(s) 13, 1027
Bso31I GGTCTC 2 cut(s) 887, 948
BsoBI CYCGRG 1 cut(s) 515
Bsp1286I GDGCHC 1 cut(s) 937
Bsp143I GATC 5 cut(s) 242, 259, 310, 654, 1055
BspACI CCGC 4 cut(s) 145, 321, 879, 1063
BspANI GGCC 2 cut(s) 13, 1027
BspCNI CTCAG 5 cut(s) 346, 353, 703, 1051, 1178
BspDI ATCGAT 1 cut(s) 309
BspFNI CGCG 1 cut(s) 462
BspLI GGNNCC 2 cut(s) 603, 823
BspT107I GGYRCC 1 cut(s) 821
BspTNI GGTCTC 2 cut(s) 887, 948
BsrBI CCGCTC 1 cut(s) 1063
BsrFI RCCGGY 1 cut(s) 182
BsrI ACTGG 1 cut(s) 578
BssAI RCCGGY 1 cut(s) 182
BssECI CCNNGG 2 cut(s) 515, 759
BssMI GATC 5 cut(s) 242, 259, 310, 654, 1055
BssNI GRCGYC 1 cut(s) 822
Bst4CI ACNGT 2 cut(s) 130, 633
Bst6I CTCTTC 1 cut(s) 1101
BstACI GRCGYC 1 cut(s) 822
BstC8I GCNNGC 5 cut(s) 378, 796, 826, 830, 1045
BstDEI CTNAG 5 cut(s) 340, 354, 711, 1059, 1165
BstF5I GGATG 1 cut(s) 445
BstFNI CGCG 1 cut(s) 462
BstH2I RGCGCY 1 cut(s) 825
BstHHI GCGC 2 cut(s) 758, 824
BstKTI GATC 5 cut(s) 245, 262, 313, 657, 1058
BstMAI GTCTC 4 cut(s) 573, 720, 887, 948
BstMBI GATC 5 cut(s) 242, 259, 310, 654, 1055
BstMWI GCNNNNNNNGC 2 cut(s) 341, 350
BstNSI RCATGY 3 cut(s) 380, 674, 798
BstSCI CCNGG 3 cut(s) 287, 514, 515
BstUI CGCG 1 cut(s) 462
BstV2I GAAGAC 1 cut(s) 32
BstX2I RGATCY 1 cut(s) 1055
BstYI RGATCY 1 cut(s) 1055
Bsu15I ATCGAT 1 cut(s) 309
BsuI GTATCC 1 cut(s) 450
BsuRI GGCC 2 cut(s) 13, 1027
BsuTUI ATCGAT 1 cut(s) 309
BtsCI GGATG 1 cut(s) 445
BtsI GCAGTG 1 cut(s) 781
BtsIMutI CAGTG 2 cut(s) 781, 834
Cac8I GCNNGC 5 cut(s) 378, 796, 826, 830, 1045
CfoI GCGC 2 cut(s) 758, 824
Cfr10I RCCGGY 1 cut(s) 182
Cfr13I GGNCC 2 cut(s) 1025, 1082
Cfr9I CCCGGG 1 cut(s) 515
ClaI ATCGAT 1 cut(s) 309
Csp6I GTAC 4 cut(s) 553, 661, 843, 1156
CviAII CATG 9 cut(s) 361, 377, 416, 470, 598, 671, 748, 795, 925
CviQI GTAC 4 cut(s) 553, 661, 843, 1156
DdeI CTNAG 5 cut(s) 340, 354, 711, 1059, 1165
DinI GGCGCC 1 cut(s) 823
DpnI GATC 5 cut(s) 244, 261, 312, 656, 1057
DpnII GATC 5 cut(s) 242, 259, 310, 654, 1055
Eam1104I CTCTTC 1 cut(s) 1101
EarI CTCTTC 1 cut(s) 1101
Eco24I GRGCYC 1 cut(s) 937
Eco31I GGTCTC 2 cut(s) 887, 948
Eco47I GGWCC 1 cut(s) 1082
Eco57I CTGAAG 1 cut(s) 947
Eco88I CYCGRG 1 cut(s) 515
EcoRI GAATTC 1 cut(s) 420
EcoT38I GRGCYC 1 cut(s) 937
EgeI GGCGCC 1 cut(s) 823
EheI GGCGCC 1 cut(s) 823
FaeI CATG 9 cut(s) 364, 380, 419, 473, 601, 674, 751, 798, 928
FatI CATG 9 cut(s) 360, 376, 415, 469, 597, 670, 747, 794, 924
FbaI TGATCA 1 cut(s) 259
Fnu4HI GCNGC 1 cut(s) 322
FokI GGATG 1 cut(s) 452
FriOI GRGCYC 1 cut(s) 937
Fsp4HI GCNGC 1 cut(s) 322
FspBI CTAG 1 cut(s) 938
GlaI GCGC 2 cut(s) 757, 823
GluI GCNGC 1 cut(s) 322
GsuI CTGGAG 2 cut(s) 223, 595
HaeII RGCGCY 1 cut(s) 825
HaeIII GGCC 2 cut(s) 13, 1027
HapII CCGG 3 cut(s) 183, 289, 516
HhaI GCGC 2 cut(s) 758, 824
Hin1I GRCGYC 1 cut(s) 822
Hin1II CATG 9 cut(s) 364, 380, 419, 473, 601, 674, 751, 798, 928
Hin6I GCGC 2 cut(s) 756, 822
HinP1I GCGC 2 cut(s) 756, 822
HindIII AAGCTT 3 cut(s) 558, 888, 1045
HinfI GANTC 7 cut(s) 210, 338, 412, 448, 511, 713, 901
HpaII CCGG 3 cut(s) 183, 289, 516
HphI GGTGA 3 cut(s) 287, 457, 844
Hpy166II GTNNAC 2 cut(s) 133, 155
Hpy188I TCNGA 9 cut(s) 50, 264, 712, 732, 1055, 1060, 1082, 1105, 1168
Hpy188III TCNNGA 2 cut(s) 240, 700
Hpy8I GTNNAC 2 cut(s) 133, 155
HpyAV CCTTC 3 cut(s) 968, 1163, 1168
HpyCH4III ACNGT 2 cut(s) 130, 633
HpyCH4V TGCA 5 cut(s) 58, 112, 206, 642, 865
HpyF10VI GCNNNNNNNGC 2 cut(s) 341, 350
HpyF3I CTNAG 5 cut(s) 340, 354, 711, 1059, 1165
Hsp92I GRCGYC 1 cut(s) 822
Hsp92II CATG 9 cut(s) 364, 380, 419, 473, 601, 674, 751, 798, 928
HspAI GCGC 2 cut(s) 756, 822
KasI GGCGCC 1 cut(s) 821
Ksp22I TGATCA 1 cut(s) 259
Kzo9I GATC 5 cut(s) 242, 259, 310, 654, 1055
LmnI GCTCC 3 cut(s) 4, 51, 607
LweI GCATC 2 cut(s) 193, 274
MaeI CTAG 1 cut(s) 938
MaeIII GTNAC 3 cut(s) 88, 140, 779
MalI GATC 5 cut(s) 244, 261, 312, 656, 1057
MbiI CCGCTC 1 cut(s) 1063
MboI GATC 5 cut(s) 242, 259, 310, 654, 1055
MflI RGATCY 1 cut(s) 1055
MhlI GDGCHC 1 cut(s) 937
MluCI AATT 4 cut(s) 97, 420, 626, 1086
Mly113I GGCGCC 1 cut(s) 822
MlyI GAGTC 4 cut(s) 219, 332, 505, 722
MmeI TCCRAC 2 cut(s) 326, 931
MnlI CCTC 9 cut(s) 234, 258, 262, 266, 349, 436, 446, 673, 754
MroXI GAANNNNTTC 1 cut(s) 497
MseI TTAA 6 cut(s) 68, 689, 726, 912, 1089, 1140
MslI CAYNNNNRTG 2 cut(s) 381, 837
MspI CCGG 3 cut(s) 183, 289, 516
MspR9I CCNGG 3 cut(s) 289, 516, 517
MvnI CGCG 1 cut(s) 462
MwoI GCNNNNNNNGC 2 cut(s) 341, 350
NarI GGCGCC 1 cut(s) 822
NciI CCSGG 3 cut(s) 289, 516, 517
NdeII GATC 5 cut(s) 242, 259, 310, 654, 1055
NlaIII CATG 9 cut(s) 364, 380, 419, 473, 601, 674, 751, 798, 928
NlaIV GGNNCC 2 cut(s) 603, 823
NmeAIII GCCGAG 1 cut(s) 784
NmuCI GTSAC 2 cut(s) 140, 779
NspI RCATGY 3 cut(s) 380, 674, 798
PaeI GCATGC 2 cut(s) 380, 798
PdmI GAANNNNTTC 1 cut(s) 497
PfeI GAWTC 3 cut(s) 412, 448, 901
PkrI GCNGC 1 cut(s) 323
PleI GAGTC 4 cut(s) 218, 332, 505, 721
PluTI GGCGCC 1 cut(s) 825
PpsI GAGTC 4 cut(s) 218, 332, 505, 721
PspN4I GGNNCC 2 cut(s) 603, 823
PspPI GGNCC 2 cut(s) 1025, 1082
PsuI RGATCY 1 cut(s) 1055
RsaI GTAC 4 cut(s) 554, 662, 844, 1157
RsaNI GTAC 4 cut(s) 553, 661, 843, 1156
RseI CAYNNNNRTG 2 cut(s) 381, 837
SaqAI TTAA 6 cut(s) 68, 689, 726, 912, 1089, 1140
SatI GCNGC 1 cut(s) 322
Sau3AI GATC 5 cut(s) 242, 259, 310, 654, 1055
Sau96I GGNCC 2 cut(s) 1025, 1082
ScaI AGTACT 1 cut(s) 662
SchI GAGTC 4 cut(s) 219, 332, 505, 722
ScrFI CCNGG 3 cut(s) 289, 516, 517
SduI GDGCHC 1 cut(s) 937
SfaNI GCATC 2 cut(s) 193, 274
SfoI GGCGCC 1 cut(s) 823
SinI GGWCC 1 cut(s) 1082
SmaI CCCGGG 1 cut(s) 517
SmiMI CAYNNNNRTG 2 cut(s) 381, 837
SphI GCATGC 2 cut(s) 380, 798
Sse9I AATT 4 cut(s) 97, 420, 626, 1086
SsiI CCGC 4 cut(s) 145, 321, 879, 1063
SspDI GGCGCC 1 cut(s) 821
SspMI CTAG 1 cut(s) 938
StyD4I CCNGG 3 cut(s) 287, 514, 515
TaaI ACNGT 2 cut(s) 130, 633
TaqI TCGA 5 cut(s) 201, 309, 451, 657, 699
TasI AATT 4 cut(s) 97, 420, 626, 1086
TatI WGTACW 1 cut(s) 660
TauI GCSGC 1 cut(s) 324
TfiI GAWTC 3 cut(s) 412, 448, 901
Tru1I TTAA 6 cut(s) 68, 689, 726, 912, 1089, 1140
Tru9I TTAA 6 cut(s) 68, 689, 726, 912, 1089, 1140
TscAI CASTG 2 cut(s) 788, 841
TseFI GTSAC 2 cut(s) 140, 779
Tsp45I GTSAC 2 cut(s) 140, 779
TspDTI ATGAA 4 cut(s) 552, 586, 764, 838
TspMI CCCGGG 1 cut(s) 515
TspRI CASTG 2 cut(s) 788, 841
VpaK11BI GGWCC 1 cut(s) 1082
XapI RAATTY 1 cut(s) 420
XceI RCATGY 3 cut(s) 380, 674, 798
XmaI CCCGGG 1 cut(s) 515
XmnI GAANNNNTTC 1 cut(s) 497
XspI CTAG 1 cut(s) 938
ZrmI AGTACT 1 cut(s) 662
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.