Rroxscaffold_5G00337450

Belongs to the iron ascorbate-dependent oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0000054
Physical Location & Seq
Forward (+)
5609031 .. 5611350
2320 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00337450.1

Sequence Viewer

Length: 1017 bp
ATGGTCACCGGGAAGTCAAGCGACCAAGAGCGTCTGCAGCAACTTAAGGCCTTCGATGAATCCAAAGCTGGTGTCAAAGGGATCGTCGATGGCGGAATCACCAAAGTCCCACCAATTTTCGTCCGTCCAAAGGAAGACCACTCCGTCGGCGGCGACCAGAAGGTTTCAGGCCATTTCAGTATCCCAGTGGTGGATCTCTCTGAAAATAACGACACGCGTGCTGTGGTGATCGACCAAGTCCGGAGGGCCGCAGAGAGCTATGGGTTCTTTCAGTTGGTGAACCATGGAGTGCCTGAGAGGGTGATGGAGGAGATCATGGAGGCGACTCGTGCGTTTCACGAGCTGCCGAGGGAGGTGAAGGCTGAGTACTACGGTAGAGAACTGGTGAGGAAGGTCAAGTACTTCACTAGCAATAACATGTATGAGTTGATGTATGGTGATTGGAGAGACAGTATGCAGATTAACAGGAGTGTTGAGGACTTTGATCCTCAAGAAATTCCTCCCGTTCTCAGAGATATAACTATAAGGTACTCGGAGCATGCTCAGAAATTAGGTGTCACTTTGTTTGAATTGCTATCTGAAGCGCTTGGGCTCAAATCGGATCATCTCATAAACTTGGATTGTGCAAAGGGGCATATGATTCTTAATCACTATTATCCTCCATGCCCCGAGCCTGAACTGACTATGGGCATCAACCCACACTCGGATCCCGATTTTCTCACCATTCTACTTCAAGACCAAATTGGTGGACTCCAACTAATCTCAAACGGCAAGTTCATTAGTGCCAGACACAGAGTAGTGGCCAAAAAAGAAGGTCCAAGAATTTCTGTGGCGTATTTTTTTGTGCATCTTTCTCATGAAAATATTCCAAAAGTGTATGAGCCAATCAAGGAGTTGACACCAGACGGAAATCCCCCAATTTACAGGGGAACAACTGTGAAAGATTATTTTAGCGGCAACTACAAGAAAGGGAACACAACTGGGGGAGTCTCTGGACTTGAATATTTAAAGCTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2OG-FeII_Oxy DIOX_N

Protein Analysis

338

Amino Acids

38.18

Weight (kDa)

6.08

Isoelectric Point (pI)

29.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 61 - 163 1.7e-22 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 212 - 253 1.1e-12 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000054)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03400 AT1G03400 AT1G03410 AT1G03410 AT1G04350 AT1G06620 AT1G06620 AT1G06640 AT1G06640 AT1G06640 AT1G06645 AT1G06650 AT1G06650 AT2G25450 AT2G30830 AT2G30840 AT2G30840 AT2G30840 AT3G61400 AT3G61400 AT5G43440 AT5G43440 AT5G43450 AT5G43450 AT5G59530 AT5G59540 AT5G59540
fragaria_vesca FvH4_2g03190 FvH4_2g03220 FvH4_3g07861 FvH4_3g31880 FvH4_3g31880 FvH4_3g31880 FvH4_4g03241 FvH4_4g03250 FvH4_4g03251 FvH4_4g03260 FvH4_4g03300 FvH4_4g03301 FvH4_4g03301 FvH4_4g03301 FvH4_4g03302 FvH4_4g03303 FvH4_4g03303 FvH4_4g03304 FvH4_4g03305 FvH4_4g03323 FvH4_4g03323 FvH4_5g19290 FvH4_5g19290 FvH4_5g19290 FvH4_5g19291 FvH4_5g19291 FvH4_5g19310 FvH4_5g19310 FvH4_5g19310 FvH4_5g19320 FvH4_5g19321 FvH4_5g19321 FvH4_5g19321 FvH4_7g31470
malus_domestica MD00G1220300.v1.1 MD02G1050800.v1.1 MD02G1053200.v1.1 MD02G1053300.v1.1 MD02G1054900.v1.1 MD03G1032300.v1.1 MD03G1245000.v1.1 MD03G1245300.v1.1 MD05G1014200.v1.1 MD13G1210900.v1.1 MD13G1211000.v1.1 MD13G1211100.v1.1 MD13G1211200.v1.1 MD13G1211800.v1.1 MD13G1211900.v1.1 MD13G1212000.v1.1 MD16G1214100.v1.1 MD16G1214300.v1.1 MD16G1214400.v1.1 MD16G1214600.v1.1 MD16G1215000.v1.1 MD16G1215200.v1.1 MD16G1215300.v1.1 MD16G1215500.v1.1 MD16G1271000.v1.1
prunus_persica Prupe.1G035500_v2.0.a1 Prupe.1G035700_v2.0.a1 Prupe.1G035800_v2.0.a1 Prupe.1G035900_v2.0.a1 Prupe.1G036000_v2.0.a1 Prupe.1G036100_v2.0.a1 Prupe.1G036200_v2.0.a1 Prupe.1G036400_v2.0.a1 Prupe.1G036500_v2.0.a1 Prupe.1G036600_v2.0.a1 Prupe.1G036700_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G191000_v2.0.a1 Prupe.1G191100_v2.0.a1
pyrus_communis pycom13g18340 pycom13g18350 pycom13g18380 pycom16g17990 pycom16g18010 pycom16g18020
rosa_chinensis RchiOBHm_Chr2g0124051 RchiOBHm_Chr4g0391811 RchiOBHm_Chr4g0391931 RchiOBHm_Chr4g0391961 RchiOBHm_Chr4g0391971 RchiOBHm_Chr4g0391981 RchiOBHm_Chr4g0391991 RchiOBHm_Chr4g0392031 RchiOBHm_Chr4g0392051 RchiOBHm_Chr4g0392061 RchiOBHm_Chr4g0392071 RchiOBHm_Chr4g0392081 RchiOBHm_Chr4g0392091 RchiOBHm_Chr4g0392111 RchiOBHm_Chr4g0392121 RchiOBHm_Chr4g0392131 RchiOBHm_Chr4g0392141 RchiOBHm_Chr4g0392151 RchiOBHm_Chr4g0392211 RchiOBHm_Chr4g0392251 RchiOBHm_Chr4g0392261 RchiOBHm_Chr4g0392301 RchiOBHm_Chr4g0392311 RchiOBHm_Chr4g0392341 RchiOBHm_Chr4g0409221 RchiOBHm_Chr4g0410991 RchiOBHm_Chr4g0429131 RchiOBHm_Chr4g0437051 RchiOBHm_Chr5g0038681 RchiOBHm_Chr5g0047071 RchiOBHm_Chr5g0058651 RchiOBHm_Chr6g0248121 RchiOBHm_Chr6g0248141 RchiOBHm_Chr6g0248291 RchiOBHm_Chr6g0248341 RchiOBHm_Chr6g0248351
rosa_laevigata RLG00000006473 RLG00000006475 RLG00000006667 RLG00000007095 RLG00000009819 RLG00000009820 RLG00000009821 RLG00000009822 RLG00000009825 RLG00000009826 RLG00000009830 RLG00000009831 RLG00000009832 RLG00000009833 RLG00000009834 RLG00000009835 RLG00000009837 RLG00000009838 RLG00000009839 RLG00000009841 RLG00000009842 RLG00000009844 RLG00000009845 RLG00000009846 RLG00000009847 RLG00000009848 RLG00000009849 RLG00000015160 RLG00000015161 RLG00000017791 RLG00000018779 RLG00000034461 RLG00000035237
rosa_multiflora Rmu_co8253791.1_g000001 Rmu_co8348827.1_g000001 Rmu_co8400489.1_g000001 Rmu_sc0000383.1_g000003 Rmu_sc0000383.1_g000005 Rmu_sc0000383.1_g000026 Rmu_sc0000846.1_g000012 Rmu_sc0001231.1_g000013 Rmu_sc0001231.1_g000026 Rmu_sc0001231.1_g000028 Rmu_sc0001800.1_g000027 Rmu_sc0003436.1_g000022 Rmu_sc0004104.1_g000004 Rmu_sc0004295.1_g000021 Rmu_sc0004295.1_g000031 Rmu_sc0004928.1_g000002 Rmu_sc0004928.1_g000008 Rmu_sc0004928.1_g000011 Rmu_sc0004928.1_g000027 Rmu_sc0004977.1_g000007 Rmu_sc0005018.1_g000002 Rmu_sc0005091.1_g000026 Rmu_sc0005091.1_g000032 Rmu_sc0005091.1_g000033 Rmu_sc0005817.1_g000003 Rmu_sc0005817.1_g000008 Rmu_sc0012482.1_g000002 Rmu_sc0014210.1_g000001 Rmu_sc0016150.1_g000001 Rmu_sc0029701.1_g000002 Rmu_sc0036585.1_g000001 Rmu_sc0037489.1_g000002
rosa_roxburghii Rroxscaffold_1G00021790 Rroxscaffold_1G00021800 Rroxscaffold_1G00034360 Rroxscaffold_2G00120130 Rroxscaffold_5G00337210 Rroxscaffold_5G00337220 Rroxscaffold_5G00337230 Rroxscaffold_5G00337250 Rroxscaffold_5G00337260 Rroxscaffold_5G00337270 Rroxscaffold_5G00337300 Rroxscaffold_5G00337310 Rroxscaffold_5G00337320 Rroxscaffold_5G00337330 Rroxscaffold_5G00337350 Rroxscaffold_5G00337370 Rroxscaffold_5G00337390 Rroxscaffold_5G00337400 Rroxscaffold_5G00337420 Rroxscaffold_5G00337430 Rroxscaffold_5G00337450 Rroxscaffold_5G00337470 Rroxscaffold_5G00337480 Rroxscaffold_5G00337520 Rroxscaffold_5G00378130 Rroxscaffold_6G00397800 Rroxscaffold_7G00213320 Rroxscaffold_7G00213390 Rroxscaffold_7G00213420 Rroxscaffold_7G00213470
rosa_rugosa Rorug02G0070100 Rorug02G0070100 Rorug02G0070100 Rorug02G0128600 Rorug02G0128700 Rorug02G0128800 Rorug02G0128900 Rorug02G0248400 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337100 Rorug03G0337200 Rorug03G0337300 Rorug03G0337600 Rorug03G0337700 Rorug03G0337800 Rorug03G0337900 Rorug03G0337900 Rorug03G0338000 Rorug03G0338100 Rorug03G0338200 Rorug04G0233200.1 Rorug04G0297900 Rorug05G0233700 Rorug05G0316700 Rorug05G0530800 Rorug05G0530900
rosa_samantha Rh2AG307400 Rh2BG316500 Rh2DG331200 Rh4AG039300 Rh4AG039400 Rh4AG039600 Rh4AG039700 Rh4AG039900 Rh4AG040000 Rh4AG040100 Rh4AG040300 Rh4AG040500 Rh4AG040700 Rh4AG041000 Rh4AG041100 Rh4AG041600 Rh4AG041800 Rh4AG041900 Rh4AG352400 Rh4BG033200 Rh4BG034100 Rh4BG034300 Rh4BG034700 Rh4BG034800 Rh4BG035200 Rh4BG035400 Rh4BG036000 Rh4BG036200 Rh4BG036300 Rh4BG036500 Rh4BG036800 Rh4BG361700 Rh4CG042000 Rh4CG042200 Rh4CG042300 Rh4CG042500 Rh4CG042600 Rh4CG042800 Rh4CG043200 Rh4CG043400 Rh4CG043500 Rh4CG043700 Rh4CG043800 Rh4CG044200 Rh4CG044500 Rh4CG044700 Rh4CG177000 Rh4CG310600 Rh4CG376000 Rh4DG036300 Rh4DG036900 Rh4DG037000 Rh4DG037100 Rh4DG037200 Rh4DG037300 Rh4DG037500 Rh4DG037700 Rh4DG037800 Rh4DG037900 Rh4DG038000 Rh4DG038200 Rh4DG038500 Rh4DG038700 Rh4DG038900 Rh4DG159600 Rh5CG347900 Rh5DG409900 Rh6AG045300 Rh6AG045800 Rh6AG046000 Rh6AG046100 Rh6BG040600 Rh6BG040700 Rh6BG042200 Rh6BG042700 Rh6BG042800 Rh6DG035900 Rh6DG036100 Rh6DG036200
rosa_wichuraiana Rw0G010420 Rw2G024780 Rw4G003020 Rw4G003070 Rw4G003080 Rw4G003090 Rw4G003100 Rw4G003130 Rw4G003140 Rw4G003150 Rw4G003180 Rw4G003190 Rw4G003200 Rw4G003210 Rw4G003220 Rw4G003240 Rw4G003270 Rw4G025050 Rw4G030850 Rw6G003930 Rw6G004000 Rw6G004030 Rw6G004040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 143
AccII CGCG 1 cut(s) 217
AccIII TCCGGA 1 cut(s) 240
AciI CCGC 4 cut(s) 93, 150, 249, 954
AclWI GGATC 6 cut(s) 89, 201, 479, 609, 701, 714
AcoI YGGCCR 1 cut(s) 801
AcsI RAATTY 2 cut(s) 495, 822
AcuI CTGAAG 1 cut(s) 600
AfaI GTAC 3 cut(s) 368, 401, 530
AfeI AGCGCT 1 cut(s) 585
AfiI CCNNNNNNNGG 3 cut(s) 130, 190, 703
AflII CTTAAG 1 cut(s) 44
AflIII ACRYGT 2 cut(s) 215, 417
AgsI TTSAA 3 cut(s) 569, 734, 1001
AluBI AGCT 4 cut(s) 68, 258, 343, 1012
AluI AGCT 4 cut(s) 68, 258, 343, 1012
Alw26I GTCTC 2 cut(s) 441, 994
AlwI GGATC 6 cut(s) 89, 201, 479, 609, 701, 714
Ama87I CYCGRG 1 cut(s) 668
Aor13HI TCCGGA 1 cut(s) 240
Aor51HI AGCGCT 1 cut(s) 585
AoxI GGCC 4 cut(s) 48, 169, 246, 801
ApeKI GCWGC 2 cut(s) 37, 343
ApoI RAATTY 2 cut(s) 495, 822
ArsI GACNNNNNNTTYG 4 cut(s) 57, 69, 89, 101
Asp700I GAANNNNTTC 1 cut(s) 864
AspLEI GCGC 1 cut(s) 586
AspS9I GGNCC 2 cut(s) 246, 815
AsuC2I CCSGG 1 cut(s) 10
AsuHPI GGTGA 8 cut(s) 91, 238, 289, 313, 367, 397, 449, 712
AvaI CYCGRG 1 cut(s) 668
AvaII GGWCC 1 cut(s) 815
BalI TGGCCA 1 cut(s) 803
BamHI GGATCC 1 cut(s) 706
BanII GRGCYC 1 cut(s) 594
BarI GAAGNNNNNNTAC 4 cut(s) 350, 382, 383, 415
BauI CACGAG 2 cut(s) 327, 338
BbsI GAAGAC 1 cut(s) 141
BbvI GCAGC 2 cut(s) 49, 330
BccI CCATC 2 cut(s) 83, 298
BceAI ACGGC 1 cut(s) 784
BcgI CGANNNNNNTGC 2 cut(s) 200, 234
BciVI GTATCC 1 cut(s) 191
BcnI CCSGG 1 cut(s) 10
BcoDI GTCTC 2 cut(s) 441, 994
BfaI CTAG 1 cut(s) 408
BfmI CTRYAG 1 cut(s) 35
BfoI RGCGCY 1 cut(s) 587
BfrI CTTAAG 1 cut(s) 44
BfuI GTATCC 1 cut(s) 191
BisI GCNGC 5 cut(s) 38, 151, 249, 344, 955
BlsI GCNGC 5 cut(s) 39, 152, 250, 345, 956
BmcAI AGTACT 2 cut(s) 368, 401
Bme1390I CCNGG 1 cut(s) 10
Bme18I GGWCC 1 cut(s) 815
BmeT110I CYCGRG 1 cut(s) 668
BmgT120I GGNCC 2 cut(s) 246, 815
BmiI GGNNCC 1 cut(s) 708
BmrFI CCNGG 1 cut(s) 10
BmrI ACTGGG 2 cut(s) 179, 990
BmsI GCATC 2 cut(s) 699, 856
BmuI ACTGGG 2 cut(s) 179, 990
BpiI GAAGAC 1 cut(s) 141
BpuEI CTTGAG 1 cut(s) 474
BpuMI CCSGG 1 cut(s) 10
BsaJI CCNNGG 2 cut(s) 283, 347
BsaWI WCCGGW 1 cut(s) 240
BsaXI ACNNNNNCTCC 2 cut(s) 436, 466
Bsc4I CCNNNNNNNGG 3 cut(s) 130, 190, 703
Bse1I ACTGG 3 cut(s) 185, 387, 985
BseAI TCCGGA 1 cut(s) 240
BseDI CCNNGG 2 cut(s) 283, 347
BseLI CCNNNNNNNGG 3 cut(s) 130, 190, 703
BseMII CTCAG 4 cut(s) 285, 354, 523, 557
BseNI ACTGG 3 cut(s) 185, 387, 985
BseRI GAGGAG 1 cut(s) 323
BseXI GCAGC 2 cut(s) 49, 330
Bsh1236I CGCG 1 cut(s) 217
BshFI GGCC 4 cut(s) 50, 171, 248, 803
BsiHKCI CYCGRG 1 cut(s) 668
BsiSI CCGG 2 cut(s) 9, 241
BslFI GGGAC 1 cut(s) 92
BslI CCNNNNNNNGG 3 cut(s) 130, 190, 703
BsmAI GTCTC 2 cut(s) 441, 994
BsmFI GGGAC 1 cut(s) 92
BsnI GGCC 4 cut(s) 50, 171, 248, 803
BsoBI CYCGRG 1 cut(s) 668
Bsp1286I GDGCHC 1 cut(s) 594
Bsp13I TCCGGA 1 cut(s) 240
Bsp143I GATC 7 cut(s) 81, 193, 228, 312, 484, 601, 706
Bsp19I CCATGG 1 cut(s) 283
BspACI CCGC 4 cut(s) 93, 150, 249, 954
BspANI GGCC 4 cut(s) 50, 171, 248, 803
BspCNI CTCAG 4 cut(s) 286, 355, 522, 556
BspEI TCCGGA 1 cut(s) 240
BspFNI CGCG 1 cut(s) 217
BspHI TCATGA 1 cut(s) 856
BspLI GGNNCC 1 cut(s) 708
BspMAI CTGCAG 1 cut(s) 39
BspPI GGATC 6 cut(s) 89, 201, 479, 609, 701, 714
BspTI CTTAAG 1 cut(s) 44
BsrI ACTGG 3 cut(s) 185, 387, 985
BssECI CCNNGG 2 cut(s) 283, 347
BssMI GATC 7 cut(s) 81, 193, 228, 312, 484, 601, 706
BssSI CACGAG 2 cut(s) 327, 338
BssT1I CCWWGG 1 cut(s) 283
Bst2BI CACGAG 2 cut(s) 327, 338
Bst4CI ACNGT 3 cut(s) 374, 452, 937
BstAFI CTTAAG 1 cut(s) 44
BstC8I GCNNGC 2 cut(s) 219, 540
BstDEI CTNAG 4 cut(s) 294, 363, 509, 543
BstDSI CCRYGG 1 cut(s) 283
BstEII GGTNACC 1 cut(s) 4
BstFNI CGCG 1 cut(s) 217
BstH2I RGCGCY 1 cut(s) 587
BstHHI GCGC 1 cut(s) 586
BstKTI GATC 7 cut(s) 84, 196, 231, 315, 487, 604, 709
BstMAI GTCTC 2 cut(s) 441, 994
BstMBI GATC 7 cut(s) 81, 193, 228, 312, 484, 601, 706
BstMWI GCNNNNNNNGC 2 cut(s) 37, 329
BstNSI RCATGY 2 cut(s) 421, 542
BstPI GGTNACC 1 cut(s) 4
BstSCI CCNGG 1 cut(s) 8
BstSFI CTRYAG 1 cut(s) 35
BstUI CGCG 1 cut(s) 217
BstV1I GCAGC 2 cut(s) 49, 330
BstV2I GAAGAC 1 cut(s) 141
BstX2I RGATCY 2 cut(s) 193, 706
BstXI CCANNNNNNTGG 1 cut(s) 746
BstYI RGATCY 2 cut(s) 193, 706
BsuI GTATCC 1 cut(s) 191
BsuRI GGCC 4 cut(s) 50, 171, 248, 803
BtgI CCRYGG 1 cut(s) 283
BtsIMutI CAGTG 1 cut(s) 192
Cac8I GCNNGC 2 cut(s) 219, 540
CciI TCATGA 1 cut(s) 856
CfoI GCGC 1 cut(s) 586
Cfr13I GGNCC 2 cut(s) 246, 815
CseI GACGC 1 cut(s) 20
Csp6I GTAC 3 cut(s) 367, 400, 529
CviAII CATG 6 cut(s) 284, 316, 418, 539, 663, 857
CviQI GTAC 3 cut(s) 367, 400, 529
DdeI CTNAG 4 cut(s) 294, 363, 509, 543
DpnI GATC 7 cut(s) 83, 195, 230, 314, 486, 603, 708
DpnII GATC 7 cut(s) 81, 193, 228, 312, 484, 601, 706
DraI TTTAAA 1 cut(s) 1008
DrdI GACNNNNNNGTC 1 cut(s) 143
DseDI GACNNNNNNGTC 1 cut(s) 143
EaeI YGGCCR 1 cut(s) 801
EciI GGCGGA 1 cut(s) 108
Eco130I CCWWGG 1 cut(s) 283
Eco147I AGGCCT 1 cut(s) 50
Eco24I GRGCYC 1 cut(s) 594
Eco47I GGWCC 1 cut(s) 815
Eco47III AGCGCT 1 cut(s) 585
Eco57I CTGAAG 1 cut(s) 600
Eco88I CYCGRG 1 cut(s) 668
Eco91I GGTNACC 1 cut(s) 4
EcoO65I GGTNACC 1 cut(s) 4
EcoT14I CCWWGG 1 cut(s) 283
EcoT38I GRGCYC 1 cut(s) 594
ErhI CCWWGG 1 cut(s) 283
FaeI CATG 6 cut(s) 287, 319, 421, 542, 666, 860
FaqI GGGAC 1 cut(s) 92
FatI CATG 6 cut(s) 283, 315, 417, 538, 662, 856
FauNDI CATATG 1 cut(s) 636
Fnu4HI GCNGC 5 cut(s) 38, 151, 249, 344, 955
FriOI GRGCYC 1 cut(s) 594
Fsp4HI GCNGC 5 cut(s) 38, 151, 249, 344, 955
FspBI CTAG 1 cut(s) 408
GlaI GCGC 1 cut(s) 585
GluI GCNGC 5 cut(s) 38, 151, 249, 344, 955
HaeII RGCGCY 1 cut(s) 587
HaeIII GGCC 4 cut(s) 50, 171, 248, 803
HapII CCGG 2 cut(s) 9, 241
HgaI GACGC 1 cut(s) 20
HhaI GCGC 1 cut(s) 586
Hin1II CATG 6 cut(s) 287, 319, 421, 542, 666, 860
Hin6I GCGC 1 cut(s) 584
HinP1I GCGC 1 cut(s) 584
HincII GTYRAC 1 cut(s) 897
HindII GTYRAC 1 cut(s) 897
HinfI GANTC 6 cut(s) 59, 96, 325, 640, 750, 987
HpaII CCGG 2 cut(s) 9, 241
HphI GGTGA 8 cut(s) 91, 238, 289, 313, 367, 397, 449, 712
Hpy166II GTNNAC 3 cut(s) 280, 749, 897
Hpy188I TCNGA 7 cut(s) 202, 512, 535, 546, 580, 601, 706
Hpy188III TCNNGA 7 cut(s) 241, 338, 491, 710, 734, 857, 993
Hpy8I GTNNAC 3 cut(s) 280, 749, 897
Hpy99I CGWCG 2 cut(s) 89, 149
HpyAV CCTTC 5 cut(s) 61, 154, 352, 385, 806
HpyCH4III ACNGT 3 cut(s) 374, 452, 937
HpyCH4V TGCA 4 cut(s) 37, 457, 626, 847
HpyF10VI GCNNNNNNNGC 2 cut(s) 37, 329
HpyF3I CTNAG 4 cut(s) 294, 363, 509, 543
Hsp92II CATG 6 cut(s) 287, 319, 421, 542, 666, 860
HspAI GCGC 1 cut(s) 584
Kpn2I TCCGGA 1 cut(s) 240
Kzo9I GATC 7 cut(s) 81, 193, 228, 312, 484, 601, 706
LmnI GCTCC 1 cut(s) 535
Lsp1109I GCAGC 2 cut(s) 49, 330
LweI GCATC 2 cut(s) 699, 856
MaeI CTAG 1 cut(s) 408
MaeIII GTNAC 2 cut(s) 4, 556
MalI GATC 7 cut(s) 83, 195, 230, 314, 486, 603, 708
MboI GATC 7 cut(s) 81, 193, 228, 312, 484, 601, 706
MboII GAAGA 1 cut(s) 146
MflI RGATCY 2 cut(s) 193, 706
MhlI GDGCHC 1 cut(s) 594
MlsI TGGCCA 1 cut(s) 803
MluCI AATT 7 cut(s) 114, 495, 548, 569, 741, 822, 918
MluI ACGCGT 1 cut(s) 215
MluNI TGGCCA 1 cut(s) 803
MlyI GAGTC 3 cut(s) 319, 744, 996
MmeI TCCRAC 1 cut(s) 778
Mox20I TGGCCA 1 cut(s) 803
MroI TCCGGA 1 cut(s) 240
MroXI GAANNNNTTC 1 cut(s) 864
MscI TGGCCA 1 cut(s) 803
MseI TTAA 4 cut(s) 45, 462, 645, 1007
Msp20I TGGCCA 1 cut(s) 803
MspCI CTTAAG 1 cut(s) 44
MspI CCGG 2 cut(s) 9, 241
MspR9I CCNGG 1 cut(s) 10
MvnI CGCG 1 cut(s) 217
MwoI GCNNNNNNNGC 2 cut(s) 37, 329
NciI CCSGG 1 cut(s) 10
NcoI CCATGG 1 cut(s) 283
NdeI CATATG 1 cut(s) 636
NdeII GATC 7 cut(s) 81, 193, 228, 312, 484, 601, 706
NlaIII CATG 6 cut(s) 287, 319, 421, 542, 666, 860
NlaIV GGNNCC 1 cut(s) 708
NmeAIII GCCGAG 1 cut(s) 372
NmuCI GTSAC 2 cut(s) 4, 556
NspI RCATGY 2 cut(s) 421, 542
PaeI GCATGC 1 cut(s) 542
PagI TCATGA 1 cut(s) 856
PceI AGGCCT 1 cut(s) 50
PciI ACATGT 1 cut(s) 417
PdmI GAANNNNTTC 1 cut(s) 864
PfeI GAWTC 3 cut(s) 59, 96, 640
PflFI GACNNNGTC 1 cut(s) 236
PkrI GCNGC 5 cut(s) 39, 152, 250, 345, 956
PleI GAGTC 3 cut(s) 319, 744, 995
PpsI GAGTC 3 cut(s) 319, 744, 995
PscI ACATGT 1 cut(s) 417
PspEI GGTNACC 1 cut(s) 4
PspN4I GGNNCC 1 cut(s) 708
PspPI GGNCC 2 cut(s) 246, 815
PstI CTGCAG 1 cut(s) 39
PsuI RGATCY 2 cut(s) 193, 706
PsyI GACNNNGTC 1 cut(s) 236
RsaI GTAC 3 cut(s) 368, 401, 530
RsaNI GTAC 3 cut(s) 367, 400, 529
SaqAI TTAA 4 cut(s) 45, 462, 645, 1007
SatI GCNGC 5 cut(s) 38, 151, 249, 344, 955
Sau3AI GATC 7 cut(s) 81, 193, 228, 312, 484, 601, 706
Sau96I GGNCC 2 cut(s) 246, 815
ScaI AGTACT 2 cut(s) 368, 401
SchI GAGTC 3 cut(s) 319, 744, 996
ScrFI CCNGG 1 cut(s) 10
SduI GDGCHC 1 cut(s) 594
SfaNI GCATC 2 cut(s) 699, 856
SfcI CTRYAG 1 cut(s) 35
SinI GGWCC 1 cut(s) 815
SmlI CTYRAG 2 cut(s) 44, 489
SmoI CTYRAG 2 cut(s) 44, 489
SphI GCATGC 1 cut(s) 542
Sse9I AATT 7 cut(s) 114, 495, 548, 569, 741, 822, 918
SseBI AGGCCT 1 cut(s) 50
SsiI CCGC 4 cut(s) 93, 150, 249, 954
SspI AATATT 2 cut(s) 865, 1004
SspMI CTAG 1 cut(s) 408
StuI AGGCCT 1 cut(s) 50
StyD4I CCNGG 1 cut(s) 8
StyI CCWWGG 1 cut(s) 283
TaaI ACNGT 3 cut(s) 374, 452, 937
TaqI TCGA 3 cut(s) 54, 87, 231
TasI AATT 7 cut(s) 114, 495, 548, 569, 741, 822, 918
TatI WGTACW 2 cut(s) 366, 399
TauI GCSGC 3 cut(s) 153, 251, 957
TfiI GAWTC 3 cut(s) 59, 96, 640
Tru1I TTAA 4 cut(s) 45, 462, 645, 1007
Tru9I TTAA 4 cut(s) 45, 462, 645, 1007
TscAI CASTG 1 cut(s) 192
TseFI GTSAC 2 cut(s) 4, 556
TseI GCWGC 2 cut(s) 37, 343
Tsp45I GTSAC 2 cut(s) 4, 556
TspDTI ATGAA 3 cut(s) 72, 766, 873
TspGWI ACGGA 3 cut(s) 113, 133, 921
TspRI CASTG 1 cut(s) 192
Tth111I GACNNNGTC 1 cut(s) 236
Vha464I CTTAAG 1 cut(s) 44
VpaK11BI GGWCC 1 cut(s) 815
XapI RAATTY 2 cut(s) 495, 822
XceI RCATGY 2 cut(s) 421, 542
XmnI GAANNNNTTC 1 cut(s) 864
XspI CTAG 1 cut(s) 408
ZrmI AGTACT 2 cut(s) 368, 401
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.