MD02G1054900.v1.1

Belongs to the iron ascorbate-dependent oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0000054
Physical Location & Seq
Forward (+)
4420254 .. 4422008
1755 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1054900.v1.1.491

Sequence Viewer

Length: 885 bp
ATGGTAGCTCCCAACACCAATGAGGTTCCAAACAATTACGATCGAAAAAGCGAAGTGAAAGCTTTTGATGAGACAAGGGAAGGCGTTAAGGGTCTTGTTGATGCCGGGGTAGCCGAGGTTCCTAGAATTTTTCATCAACCACCACAATTGGACGATCAGTACTCCATCAACAATACAAGCACTGACTCAGAAGCCACCCAGTTTAGCATTCCGCTAATAGACCTTGAAGACCATGGCATCAGAGACTTGGGCTTCTTTCAAATAGCGAATCATGGGATACCTGTAAGTCTTCTGGAGGGGATAAAGGATGGGGTACGTGGGTTTTATGAGCAGGACACTCGAGTCAAGAAAGAGTTTTACACTCGTGATCACTCTAAACCTTTGTTTTACAATAGCAACTTTGATCTTTATAGTTCACCGGCAACGAATTGGAGGGATACTTTTAAGTGTTACATGGCTCCAAATCCTCCTAAGCCAGAAGACTTGCCAGAAGTATGCAGAGACGTACTGATCGAGTATTCAAAGCGAGTAATGGAGTTGGGGAAATTGTTGTTTGAGTTGTTGTCGGAGGCCCTTGGGCTAAAGCCAAGCCACTTGAATAACATAGATTGTAGTAAGGGGCTACAGGTTTTAGGCCATTACTATCCTGCTTGTCCACAGCCAGAGTTAACTTTGGGCACAAGCAAGCACGCTGATGATTCCTTCCTTACGGTCCTTCTGCAAGATCATATTGGTGGTCTGCAAGTTGTTGGTCGTCAAAATAAGTGGATTGATGTACCCCCTGTGCCTGGGGCTTTAGTGGTGAACATTGGAGATCTTTTACAACTCATATCAAATGATAGATTCAAAAGCGTAGAACACAGGGTAATGGCGAACCGTCCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2OG-FeII_Oxy DIOX_N

Protein Analysis

295

Amino Acids

33.09

Weight (kDa)

5.29

Isoelectric Point (pI)

45.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 78 - 159 4.1e-10 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 211 - 293 4e-30 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000054)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03400 AT1G03400 AT1G03410 AT1G03410 AT1G04350 AT1G06620 AT1G06620 AT1G06640 AT1G06640 AT1G06640 AT1G06645 AT1G06650 AT1G06650 AT2G25450 AT2G30830 AT2G30840 AT2G30840 AT2G30840 AT3G61400 AT3G61400 AT5G43440 AT5G43440 AT5G43450 AT5G43450 AT5G59530 AT5G59540 AT5G59540
fragaria_vesca FvH4_2g03190 FvH4_2g03220 FvH4_3g07861 FvH4_3g31880 FvH4_3g31880 FvH4_3g31880 FvH4_4g03241 FvH4_4g03250 FvH4_4g03251 FvH4_4g03260 FvH4_4g03300 FvH4_4g03301 FvH4_4g03301 FvH4_4g03301 FvH4_4g03302 FvH4_4g03303 FvH4_4g03303 FvH4_4g03304 FvH4_4g03305 FvH4_4g03323 FvH4_4g03323 FvH4_5g19290 FvH4_5g19290 FvH4_5g19290 FvH4_5g19291 FvH4_5g19291 FvH4_5g19310 FvH4_5g19310 FvH4_5g19310 FvH4_5g19320 FvH4_5g19321 FvH4_5g19321 FvH4_5g19321 FvH4_7g31470
malus_domestica MD00G1220300.v1.1 MD02G1050800.v1.1 MD02G1053200.v1.1 MD02G1053300.v1.1 MD02G1054900.v1.1 MD03G1032300.v1.1 MD03G1245000.v1.1 MD03G1245300.v1.1 MD05G1014200.v1.1 MD13G1210900.v1.1 MD13G1211000.v1.1 MD13G1211100.v1.1 MD13G1211200.v1.1 MD13G1211800.v1.1 MD13G1211900.v1.1 MD13G1212000.v1.1 MD16G1214100.v1.1 MD16G1214300.v1.1 MD16G1214400.v1.1 MD16G1214600.v1.1 MD16G1215000.v1.1 MD16G1215200.v1.1 MD16G1215300.v1.1 MD16G1215500.v1.1 MD16G1271000.v1.1
prunus_persica Prupe.1G035500_v2.0.a1 Prupe.1G035700_v2.0.a1 Prupe.1G035800_v2.0.a1 Prupe.1G035900_v2.0.a1 Prupe.1G036000_v2.0.a1 Prupe.1G036100_v2.0.a1 Prupe.1G036200_v2.0.a1 Prupe.1G036400_v2.0.a1 Prupe.1G036500_v2.0.a1 Prupe.1G036600_v2.0.a1 Prupe.1G036700_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G191000_v2.0.a1 Prupe.1G191100_v2.0.a1
pyrus_communis pycom13g18340 pycom13g18350 pycom13g18380 pycom16g17990 pycom16g18010 pycom16g18020
rosa_chinensis RchiOBHm_Chr2g0124051 RchiOBHm_Chr4g0391811 RchiOBHm_Chr4g0391931 RchiOBHm_Chr4g0391961 RchiOBHm_Chr4g0391971 RchiOBHm_Chr4g0391981 RchiOBHm_Chr4g0391991 RchiOBHm_Chr4g0392031 RchiOBHm_Chr4g0392051 RchiOBHm_Chr4g0392061 RchiOBHm_Chr4g0392071 RchiOBHm_Chr4g0392081 RchiOBHm_Chr4g0392091 RchiOBHm_Chr4g0392111 RchiOBHm_Chr4g0392121 RchiOBHm_Chr4g0392131 RchiOBHm_Chr4g0392141 RchiOBHm_Chr4g0392151 RchiOBHm_Chr4g0392211 RchiOBHm_Chr4g0392251 RchiOBHm_Chr4g0392261 RchiOBHm_Chr4g0392301 RchiOBHm_Chr4g0392311 RchiOBHm_Chr4g0392341 RchiOBHm_Chr4g0409221 RchiOBHm_Chr4g0410991 RchiOBHm_Chr4g0429131 RchiOBHm_Chr4g0437051 RchiOBHm_Chr5g0038681 RchiOBHm_Chr5g0047071 RchiOBHm_Chr5g0058651 RchiOBHm_Chr6g0248121 RchiOBHm_Chr6g0248141 RchiOBHm_Chr6g0248291 RchiOBHm_Chr6g0248341 RchiOBHm_Chr6g0248351
rosa_laevigata RLG00000006473 RLG00000006475 RLG00000006667 RLG00000007095 RLG00000009819 RLG00000009820 RLG00000009821 RLG00000009822 RLG00000009825 RLG00000009826 RLG00000009830 RLG00000009831 RLG00000009832 RLG00000009833 RLG00000009834 RLG00000009835 RLG00000009837 RLG00000009838 RLG00000009839 RLG00000009841 RLG00000009842 RLG00000009844 RLG00000009845 RLG00000009846 RLG00000009847 RLG00000009848 RLG00000009849 RLG00000015160 RLG00000015161 RLG00000017791 RLG00000018779 RLG00000034461 RLG00000035237
rosa_multiflora Rmu_co8253791.1_g000001 Rmu_co8348827.1_g000001 Rmu_co8400489.1_g000001 Rmu_sc0000383.1_g000003 Rmu_sc0000383.1_g000005 Rmu_sc0000383.1_g000026 Rmu_sc0000846.1_g000012 Rmu_sc0001231.1_g000013 Rmu_sc0001231.1_g000026 Rmu_sc0001231.1_g000028 Rmu_sc0001800.1_g000027 Rmu_sc0003436.1_g000022 Rmu_sc0004104.1_g000004 Rmu_sc0004295.1_g000021 Rmu_sc0004295.1_g000031 Rmu_sc0004928.1_g000002 Rmu_sc0004928.1_g000008 Rmu_sc0004928.1_g000011 Rmu_sc0004928.1_g000027 Rmu_sc0004977.1_g000007 Rmu_sc0005018.1_g000002 Rmu_sc0005091.1_g000026 Rmu_sc0005091.1_g000032 Rmu_sc0005091.1_g000033 Rmu_sc0005817.1_g000003 Rmu_sc0005817.1_g000008 Rmu_sc0012482.1_g000002 Rmu_sc0014210.1_g000001 Rmu_sc0016150.1_g000001 Rmu_sc0029701.1_g000002 Rmu_sc0036585.1_g000001 Rmu_sc0037489.1_g000002
rosa_roxburghii Rroxscaffold_1G00021790 Rroxscaffold_1G00021800 Rroxscaffold_1G00034360 Rroxscaffold_2G00120130 Rroxscaffold_5G00337210 Rroxscaffold_5G00337220 Rroxscaffold_5G00337230 Rroxscaffold_5G00337250 Rroxscaffold_5G00337260 Rroxscaffold_5G00337270 Rroxscaffold_5G00337300 Rroxscaffold_5G00337310 Rroxscaffold_5G00337320 Rroxscaffold_5G00337330 Rroxscaffold_5G00337350 Rroxscaffold_5G00337370 Rroxscaffold_5G00337390 Rroxscaffold_5G00337400 Rroxscaffold_5G00337420 Rroxscaffold_5G00337430 Rroxscaffold_5G00337450 Rroxscaffold_5G00337470 Rroxscaffold_5G00337480 Rroxscaffold_5G00337520 Rroxscaffold_5G00378130 Rroxscaffold_6G00397800 Rroxscaffold_7G00213320 Rroxscaffold_7G00213390 Rroxscaffold_7G00213420 Rroxscaffold_7G00213470
rosa_rugosa Rorug02G0070100 Rorug02G0070100 Rorug02G0070100 Rorug02G0128600 Rorug02G0128700 Rorug02G0128800 Rorug02G0128900 Rorug02G0248400 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337100 Rorug03G0337200 Rorug03G0337300 Rorug03G0337600 Rorug03G0337700 Rorug03G0337800 Rorug03G0337900 Rorug03G0337900 Rorug03G0338000 Rorug03G0338100 Rorug03G0338200 Rorug04G0233200.1 Rorug04G0297900 Rorug05G0233700 Rorug05G0316700 Rorug05G0530800 Rorug05G0530900
rosa_samantha Rh2AG307400 Rh2BG316500 Rh2DG331200 Rh4AG039300 Rh4AG039400 Rh4AG039600 Rh4AG039700 Rh4AG039900 Rh4AG040000 Rh4AG040100 Rh4AG040300 Rh4AG040500 Rh4AG040700 Rh4AG041000 Rh4AG041100 Rh4AG041600 Rh4AG041800 Rh4AG041900 Rh4AG352400 Rh4BG033200 Rh4BG034100 Rh4BG034300 Rh4BG034700 Rh4BG034800 Rh4BG035200 Rh4BG035400 Rh4BG036000 Rh4BG036200 Rh4BG036300 Rh4BG036500 Rh4BG036800 Rh4BG361700 Rh4CG042000 Rh4CG042200 Rh4CG042300 Rh4CG042500 Rh4CG042600 Rh4CG042800 Rh4CG043200 Rh4CG043400 Rh4CG043500 Rh4CG043700 Rh4CG043800 Rh4CG044200 Rh4CG044500 Rh4CG044700 Rh4CG177000 Rh4CG310600 Rh4CG376000 Rh4DG036300 Rh4DG036900 Rh4DG037000 Rh4DG037100 Rh4DG037200 Rh4DG037300 Rh4DG037500 Rh4DG037700 Rh4DG037800 Rh4DG037900 Rh4DG038000 Rh4DG038200 Rh4DG038500 Rh4DG038700 Rh4DG038900 Rh4DG159600 Rh5CG347900 Rh5DG409900 Rh6AG045300 Rh6AG045800 Rh6AG046000 Rh6AG046100 Rh6BG040600 Rh6BG040700 Rh6BG042200 Rh6BG042700 Rh6BG042800 Rh6DG035900 Rh6DG036100 Rh6DG036200
rosa_wichuraiana Rw0G010420 Rw2G024780 Rw4G003020 Rw4G003070 Rw4G003080 Rw4G003090 Rw4G003100 Rw4G003130 Rw4G003140 Rw4G003150 Rw4G003180 Rw4G003190 Rw4G003200 Rw4G003210 Rw4G003220 Rw4G003240 Rw4G003270 Rw4G025050 Rw4G030850 Rw6G003930 Rw6G004000 Rw6G004030 Rw6G004040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 341
AciI CCGC 1 cut(s) 212
AcsI RAATTY 1 cut(s) 126
AfaI GTAC 4 cut(s) 161, 315, 507, 777
AfiI CCNNNNNNNGG 1 cut(s) 788
AgsI TTSAA 5 cut(s) 227, 260, 522, 598, 847
AjnI CCWGG 1 cut(s) 787
AluBI AGCT 2 cut(s) 8, 62
AluI AGCT 2 cut(s) 8, 62
Alw26I GTCTC 3 cut(s) 65, 237, 495
Ama87I CYCGRG 1 cut(s) 339
AoxI GGCC 2 cut(s) 570, 634
ApoI RAATTY 1 cut(s) 126
AspS9I GGNCC 2 cut(s) 571, 712
AsuC2I CCSGG 1 cut(s) 106
AsuHPI GGTGA 2 cut(s) 408, 814
AvaI CYCGRG 1 cut(s) 339
AvaII GGWCC 1 cut(s) 712
BaeGI GKGCMC 1 cut(s) 680
BaeI ACNNNNGTAYC 2 cut(s) 305, 338
BauI CACGAG 1 cut(s) 363
BbsI GAAGAC 3 cut(s) 234, 281, 486
BccI CCATC 2 cut(s) 173, 302
BcgI CGANNNNNNTGC 2 cut(s) 320, 354
BciT130I CCWGG 1 cut(s) 789
BciVI GTATCC 2 cut(s) 270, 430
BclI TGATCA 1 cut(s) 367
BcnI CCSGG 1 cut(s) 106
BcoDI GTCTC 3 cut(s) 65, 237, 495
BfaI CTAG 1 cut(s) 123
BfmI CTRYAG 1 cut(s) 623
BfuI GTATCC 2 cut(s) 270, 430
BglII AGATCT 1 cut(s) 814
BmcAI AGTACT 1 cut(s) 161
Bme1390I CCNGG 2 cut(s) 106, 789
Bme18I GGWCC 1 cut(s) 712
BmeT110I CYCGRG 1 cut(s) 339
BmgT120I GGNCC 2 cut(s) 571, 712
BmiI GGNNCC 3 cut(s) 27, 120, 459
BmrFI CCNGG 2 cut(s) 106, 789
BmrI ACTGGG 1 cut(s) 193
BmsI GCATC 2 cut(s) 91, 246
BmuI ACTGGG 1 cut(s) 193
BpiI GAAGAC 3 cut(s) 234, 281, 486
BpmI CTGGAG 1 cut(s) 314
Bpu10I CCTNAGC 1 cut(s) 471
BpuMI CCSGG 1 cut(s) 106
BsaAI YACGTR 1 cut(s) 317
BsaJI CCNNGG 5 cut(s) 105, 114, 232, 574, 788
Bsc4I CCNNNNNNNGG 1 cut(s) 788
Bse118I RCCGGY 1 cut(s) 418
Bse1I ACTGG 1 cut(s) 199
BseBI CCWGG 1 cut(s) 789
BseDI CCNNGG 5 cut(s) 105, 114, 232, 574, 788
BseGI GGATG 1 cut(s) 313
BseLI CCNNNNNNNGG 1 cut(s) 788
BseMII CTCAG 1 cut(s) 201
BseNI ACTGG 1 cut(s) 199
BseSI GKGCMC 1 cut(s) 680
Bsh1285I CGRYCG 1 cut(s) 43
BshFI GGCC 2 cut(s) 572, 636
BsiEI CGRYCG 1 cut(s) 43
BsiHKCI CYCGRG 1 cut(s) 339
BsiSI CCGG 2 cut(s) 105, 419
BslI CCNNNNNNNGG 1 cut(s) 788
BsmAI GTCTC 3 cut(s) 65, 237, 495
BsmBI CGTCTC 1 cut(s) 495
BsmI GAATGC 1 cut(s) 207
BsnI GGCC 2 cut(s) 572, 636
BsoBI CYCGRG 1 cut(s) 339
Bsp1286I GDGCHC 1 cut(s) 680
Bsp143I GATC 7 cut(s) 40, 154, 367, 403, 510, 724, 814
Bsp19I CCATGG 1 cut(s) 232
BspACI CCGC 1 cut(s) 212
BspANI GGCC 2 cut(s) 572, 636
BspCNI CTCAG 1 cut(s) 200
BspLI GGNNCC 3 cut(s) 27, 120, 459
BsrFI RCCGGY 1 cut(s) 418
BsrI ACTGG 1 cut(s) 199
BssAI RCCGGY 1 cut(s) 418
BssECI CCNNGG 5 cut(s) 105, 114, 232, 574, 788
BssMI GATC 7 cut(s) 40, 154, 367, 403, 510, 724, 814
BssSI CACGAG 1 cut(s) 363
BssT1I CCWWGG 2 cut(s) 232, 574
Bst2BI CACGAG 1 cut(s) 363
Bst2UI CCWGG 1 cut(s) 789
Bst4CI ACNGT 2 cut(s) 712, 878
BstBAI YACGTR 1 cut(s) 317
BstC8I GCNNGC 2 cut(s) 686, 690
BstDEI CTNAG 2 cut(s) 187, 471
BstDSI CCRYGG 1 cut(s) 232
BstF5I GGATG 1 cut(s) 313
BstKTI GATC 7 cut(s) 43, 157, 370, 406, 513, 727, 817
BstMAI GTCTC 3 cut(s) 65, 237, 495
BstMBI GATC 7 cut(s) 40, 154, 367, 403, 510, 724, 814
BstMCI CGRYCG 1 cut(s) 43
BstMWI GCNNNNNNNGC 1 cut(s) 110
BstNI CCWGG 1 cut(s) 789
BstSCI CCNGG 2 cut(s) 104, 787
BstSFI CTRYAG 1 cut(s) 623
BstSLI GKGCMC 1 cut(s) 680
BstV2I GAAGAC 3 cut(s) 234, 281, 486
BstX2I RGATCY 1 cut(s) 814
BstYI RGATCY 1 cut(s) 814
BsuI GTATCC 2 cut(s) 270, 430
BsuRI GGCC 2 cut(s) 572, 636
BtgI CCRYGG 1 cut(s) 232
BtsCI GGATG 1 cut(s) 313
BtsIMutI CAGTG 1 cut(s) 180
Cac8I GCNNGC 2 cut(s) 686, 690
Cfr10I RCCGGY 1 cut(s) 418
Cfr13I GGNCC 2 cut(s) 571, 712
Csp6I GTAC 4 cut(s) 160, 314, 506, 776
CspCI CAANNNNNGTGG 4 cut(s) 129, 164, 746, 781
CviAII CATG 3 cut(s) 233, 272, 454
CviQI GTAC 4 cut(s) 160, 314, 506, 776
DdeI CTNAG 2 cut(s) 187, 471
DpnI GATC 7 cut(s) 42, 156, 369, 405, 512, 726, 816
DpnII GATC 7 cut(s) 40, 154, 367, 403, 510, 724, 814
DrdI GACNNNNNNGTC 1 cut(s) 341
DseDI GACNNNNNNGTC 1 cut(s) 341
Eco130I CCWWGG 2 cut(s) 232, 574
Eco47I GGWCC 1 cut(s) 712
Eco88I CYCGRG 1 cut(s) 339
EcoO109I RGGNCCY 1 cut(s) 571
EcoRII CCWGG 1 cut(s) 787
EcoT14I CCWWGG 2 cut(s) 232, 574
ErhI CCWWGG 2 cut(s) 232, 574
Esp3I CGTCTC 1 cut(s) 495
FaeI CATG 3 cut(s) 236, 275, 457
FaiI YATR 9 cut(s) 234, 273, 327, 411, 455, 496, 605, 729, 830
FatI CATG 3 cut(s) 232, 271, 453
FbaI TGATCA 1 cut(s) 367
FokI GGATG 1 cut(s) 320
FspBI CTAG 1 cut(s) 123
GsuI CTGGAG 1 cut(s) 314
HaeIII GGCC 2 cut(s) 572, 636
HapII CCGG 2 cut(s) 105, 419
Hin1II CATG 3 cut(s) 236, 275, 457
HincII GTYRAC 1 cut(s) 669
HindII GTYRAC 1 cut(s) 669
HindIII AAGCTT 1 cut(s) 60
HinfI GANTC 5 cut(s) 185, 268, 342, 698, 843
HpaI GTTAAC 1 cut(s) 669
HpaII CCGG 2 cut(s) 105, 419
HphI GGTGA 2 cut(s) 408, 814
Hpy166II GTNNAC 4 cut(s) 416, 656, 669, 805
Hpy188I TCNGA 3 cut(s) 190, 242, 568
Hpy188III TCNNGA 3 cut(s) 293, 346, 365
Hpy8I GTNNAC 4 cut(s) 416, 656, 669, 805
HpyAV CCTTC 3 cut(s) 74, 712, 725
HpyCH4III ACNGT 2 cut(s) 712, 878
HpyCH4IV ACGT 2 cut(s) 316, 504
HpyCH4V TGCA 3 cut(s) 498, 721, 742
HpyF10VI GCNNNNNNNGC 1 cut(s) 110
HpyF3I CTNAG 2 cut(s) 187, 471
HpySE526I ACGT 2 cut(s) 316, 504
Hsp92II CATG 3 cut(s) 236, 275, 457
Ksp22I TGATCA 1 cut(s) 367
KspAI GTTAAC 1 cut(s) 669
Kzo9I GATC 7 cut(s) 40, 154, 367, 403, 510, 724, 814
LmnI GCTCC 2 cut(s) 13, 463
LweI GCATC 2 cut(s) 91, 246
MaeI CTAG 1 cut(s) 123
MaeII ACGT 2 cut(s) 316, 504
MaeIII GTNAC 1 cut(s) 449
MalI GATC 7 cut(s) 42, 156, 369, 405, 512, 726, 816
MboI GATC 7 cut(s) 40, 154, 367, 403, 510, 724, 814
MboII GAAGA 3 cut(s) 239, 281, 491
MfeI CAATTG 1 cut(s) 146
MflI RGATCY 1 cut(s) 814
MhlI GDGCHC 1 cut(s) 680
MluCI AATT 5 cut(s) 34, 126, 146, 427, 545
MlyI GAGTC 2 cut(s) 179, 351
MmeI TCCRAC 1 cut(s) 546
MnlI CCTC 6 cut(s) 16, 109, 289, 426, 477, 562
MseI TTAA 3 cut(s) 87, 444, 668
MslI CAYNNNNRTG 2 cut(s) 693, 732
MspI CCGG 2 cut(s) 105, 419
MspR9I CCNGG 2 cut(s) 106, 789
MunI CAATTG 1 cut(s) 146
Mva1269I GAATGC 1 cut(s) 207
MvaI CCWGG 1 cut(s) 789
MwoI GCNNNNNNNGC 1 cut(s) 110
NciI CCSGG 1 cut(s) 106
NcoI CCATGG 1 cut(s) 232
NdeII GATC 7 cut(s) 40, 154, 367, 403, 510, 724, 814
NlaIII CATG 3 cut(s) 236, 275, 457
NlaIV GGNNCC 3 cut(s) 27, 120, 459
NmeAIII GCCGAG 1 cut(s) 139
PaeR7I CTCGAG 1 cut(s) 339
PcsI WCGNNNNNNNCGW 1 cut(s) 510
PctI GAATGC 1 cut(s) 207
PfeI GAWTC 3 cut(s) 268, 698, 843
Ple19I CGATCG 1 cut(s) 43
PleI GAGTC 2 cut(s) 179, 350
PpsI GAGTC 2 cut(s) 179, 350
Ppu21I YACGTR 1 cut(s) 317
Psp6I CCWGG 1 cut(s) 787
PspGI CCWGG 1 cut(s) 787
PspN4I GGNNCC 3 cut(s) 27, 120, 459
PspPI GGNCC 2 cut(s) 571, 712
PspXI VCTCGAGB 1 cut(s) 339
PsrI GAACNNNNNNTAC 2 cut(s) 102, 134
PsuI RGATCY 1 cut(s) 814
PvuI CGATCG 1 cut(s) 43
RsaI GTAC 4 cut(s) 161, 315, 507, 777
RsaNI GTAC 4 cut(s) 160, 314, 506, 776
RseI CAYNNNNRTG 2 cut(s) 693, 732
SaqAI TTAA 3 cut(s) 87, 444, 668
Sau3AI GATC 7 cut(s) 40, 154, 367, 403, 510, 724, 814
Sau96I GGNCC 2 cut(s) 571, 712
ScaI AGTACT 1 cut(s) 161
SchI GAGTC 2 cut(s) 179, 351
ScrFI CCNGG 2 cut(s) 106, 789
SduI GDGCHC 1 cut(s) 680
SfaNI GCATC 2 cut(s) 91, 246
SfcI CTRYAG 1 cut(s) 623
Sfr274I CTCGAG 1 cut(s) 339
SinI GGWCC 1 cut(s) 712
SlaI CTCGAG 1 cut(s) 339
SmiMI CAYNNNNRTG 2 cut(s) 693, 732
SmlI CTYRAG 1 cut(s) 339
SmoI CTYRAG 1 cut(s) 339
Sse9I AATT 5 cut(s) 34, 126, 146, 427, 545
SsiI CCGC 1 cut(s) 212
SspMI CTAG 1 cut(s) 123
StyD4I CCNGG 2 cut(s) 104, 787
StyI CCWWGG 2 cut(s) 232, 574
TaaI ACNGT 2 cut(s) 712, 878
TaiI ACGT 2 cut(s) 319, 507
TaqI TCGA 3 cut(s) 43, 340, 513
TasI AATT 5 cut(s) 34, 126, 146, 427, 545
TatI WGTACW 1 cut(s) 159
TfiI GAWTC 3 cut(s) 268, 698, 843
Tru1I TTAA 3 cut(s) 87, 444, 668
Tru9I TTAA 3 cut(s) 87, 444, 668
TscAI CASTG 1 cut(s) 187
TspDTI ATGAA 1 cut(s) 122
TspGWI ACGGA 1 cut(s) 870
TspRI CASTG 1 cut(s) 187
VpaK11BI GGWCC 1 cut(s) 712
XapI RAATTY 1 cut(s) 126
XhoI CTCGAG 1 cut(s) 339
XspI CTAG 1 cut(s) 123
ZrmI AGTACT 1 cut(s) 161
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.