Rw4G003190

Belongs to the iron ascorbate-dependent oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0000054
Physical Location & Seq
Forward (+)
6310393 .. 6312194
1802 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G003190.1

Sequence Viewer

Length: 1113 bp
ATGCTCACAACAACCTCCAGTGATGGATTCAACTACGACAGGAAAAGTGAGTTGAAGGCTTTAGATGACTCAAAAGCTGGTGTTAAGGGACTCGTAGATGCTGGTTTGGCGAAGATACCAAGGATTTTCATCCATGAACAACAGAAGCTCAACAAAGCAACCAGTCCTTGTGATGGTTCCAACTTCAGTATCCCAGTCATAAGCTTAGAGGGCATCAACCAAGATCCAACTGTACGTGCTCGTGTTATCGAACAAGTTCGACATGCTTGCGAGAGTTGGGGGTTTTTCCAGGTGGTCAACCATGGGATTCCAGTCCATGATTTGGAGGAGATGATCGATGGGATAAGGAGATTTCATGAGCAAGACCAAGAAGTGAAGAAGGAATTATATTCAAGGGACTATACCAACAAACTCGTTTATTATAATACTAATTTTGATCTTTATCAATCGCCTGCAGCTAATTGGAGGGATACTCTGTCATGTGTTATGGCACCTCGTGCTCCCAATCTTGAAGAGTTGCCTAGAGTTTGCAGGGATATAATGCTTGATTACTCGGAAAAAGTGAAGGCTTTAGGAGCCACTTTATTTGAATTATTGTCTGAAGCACTTGGGCTCAATCCCAACCACCTGAAGGACTTGAGCTGCGCAGAGGGCCTATTCTTTCTTGGCCATTACTACCCAGCATGCCCTGAACCAGAATTGACCATGGGCACAACTCAACATTCTGATAGTAGCTTCCTCACAGTGCTCCTACAGGACCAAATTGGTGGCCTCCAAGTCCTCCATGAAGATCAGTGGGTGGATGTTACCCCAGTCCGGGGAGCTCTAGTTGTAAATCTTGGAGACATGTTACAGTTAATCTCAAATGACAAGTTCATTAGTGTCAATCACAGAGTGTTGGCCAAAAATGTTGGTCCAAGAATTTCCGTGGCGTGTTTTTTTAGACAACATCTTCCACCAGAAAATTCTTCCAGGTTGTATAGGCCAATTAAGGAGTTGGTGTCAGACAAGAATCCTCCAATTTACCGAGAGACCACCATCAAAGATTTTGTTGCGCACTACTATACTAAAGGGCTCAATGGTGTCTCGGCATTGGAATATTTGAAGCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2OG-FeII_Oxy DIOX_N

Protein Analysis

370

Amino Acids

41.78

Weight (kDa)

5.86

Isoelectric Point (pI)

38.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 64 - 164 2.4e-20 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 223 - 315 4e-31 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000054)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03400 AT1G03400 AT1G03410 AT1G03410 AT1G04350 AT1G06620 AT1G06620 AT1G06640 AT1G06640 AT1G06640 AT1G06645 AT1G06650 AT1G06650 AT2G25450 AT2G30830 AT2G30840 AT2G30840 AT2G30840 AT3G61400 AT3G61400 AT5G43440 AT5G43440 AT5G43450 AT5G43450 AT5G59530 AT5G59540 AT5G59540
fragaria_vesca FvH4_2g03190 FvH4_2g03220 FvH4_3g07861 FvH4_3g31880 FvH4_3g31880 FvH4_3g31880 FvH4_4g03241 FvH4_4g03250 FvH4_4g03251 FvH4_4g03260 FvH4_4g03300 FvH4_4g03301 FvH4_4g03301 FvH4_4g03301 FvH4_4g03302 FvH4_4g03303 FvH4_4g03303 FvH4_4g03304 FvH4_4g03305 FvH4_4g03323 FvH4_4g03323 FvH4_5g19290 FvH4_5g19290 FvH4_5g19290 FvH4_5g19291 FvH4_5g19291 FvH4_5g19310 FvH4_5g19310 FvH4_5g19310 FvH4_5g19320 FvH4_5g19321 FvH4_5g19321 FvH4_5g19321 FvH4_7g31470
malus_domestica MD00G1220300.v1.1 MD02G1050800.v1.1 MD02G1053200.v1.1 MD02G1053300.v1.1 MD02G1054900.v1.1 MD03G1032300.v1.1 MD03G1245000.v1.1 MD03G1245300.v1.1 MD05G1014200.v1.1 MD13G1210900.v1.1 MD13G1211000.v1.1 MD13G1211100.v1.1 MD13G1211200.v1.1 MD13G1211800.v1.1 MD13G1211900.v1.1 MD13G1212000.v1.1 MD16G1214100.v1.1 MD16G1214300.v1.1 MD16G1214400.v1.1 MD16G1214600.v1.1 MD16G1215000.v1.1 MD16G1215200.v1.1 MD16G1215300.v1.1 MD16G1215500.v1.1 MD16G1271000.v1.1
prunus_persica Prupe.1G035500_v2.0.a1 Prupe.1G035700_v2.0.a1 Prupe.1G035800_v2.0.a1 Prupe.1G035900_v2.0.a1 Prupe.1G036000_v2.0.a1 Prupe.1G036100_v2.0.a1 Prupe.1G036200_v2.0.a1 Prupe.1G036400_v2.0.a1 Prupe.1G036500_v2.0.a1 Prupe.1G036600_v2.0.a1 Prupe.1G036700_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G191000_v2.0.a1 Prupe.1G191100_v2.0.a1
pyrus_communis pycom13g18340 pycom13g18350 pycom13g18380 pycom16g17990 pycom16g18010 pycom16g18020
rosa_chinensis RchiOBHm_Chr2g0124051 RchiOBHm_Chr4g0391811 RchiOBHm_Chr4g0391931 RchiOBHm_Chr4g0391961 RchiOBHm_Chr4g0391971 RchiOBHm_Chr4g0391981 RchiOBHm_Chr4g0391991 RchiOBHm_Chr4g0392031 RchiOBHm_Chr4g0392051 RchiOBHm_Chr4g0392061 RchiOBHm_Chr4g0392071 RchiOBHm_Chr4g0392081 RchiOBHm_Chr4g0392091 RchiOBHm_Chr4g0392111 RchiOBHm_Chr4g0392121 RchiOBHm_Chr4g0392131 RchiOBHm_Chr4g0392141 RchiOBHm_Chr4g0392151 RchiOBHm_Chr4g0392211 RchiOBHm_Chr4g0392251 RchiOBHm_Chr4g0392261 RchiOBHm_Chr4g0392301 RchiOBHm_Chr4g0392311 RchiOBHm_Chr4g0392341 RchiOBHm_Chr4g0409221 RchiOBHm_Chr4g0410991 RchiOBHm_Chr4g0429131 RchiOBHm_Chr4g0437051 RchiOBHm_Chr5g0038681 RchiOBHm_Chr5g0047071 RchiOBHm_Chr5g0058651 RchiOBHm_Chr6g0248121 RchiOBHm_Chr6g0248141 RchiOBHm_Chr6g0248291 RchiOBHm_Chr6g0248341 RchiOBHm_Chr6g0248351
rosa_laevigata RLG00000006473 RLG00000006475 RLG00000006667 RLG00000007095 RLG00000009819 RLG00000009820 RLG00000009821 RLG00000009822 RLG00000009825 RLG00000009826 RLG00000009830 RLG00000009831 RLG00000009832 RLG00000009833 RLG00000009834 RLG00000009835 RLG00000009837 RLG00000009838 RLG00000009839 RLG00000009841 RLG00000009842 RLG00000009844 RLG00000009845 RLG00000009846 RLG00000009847 RLG00000009848 RLG00000009849 RLG00000015160 RLG00000015161 RLG00000017791 RLG00000018779 RLG00000034461 RLG00000035237
rosa_multiflora Rmu_co8253791.1_g000001 Rmu_co8348827.1_g000001 Rmu_co8400489.1_g000001 Rmu_sc0000383.1_g000003 Rmu_sc0000383.1_g000005 Rmu_sc0000383.1_g000026 Rmu_sc0000846.1_g000012 Rmu_sc0001231.1_g000013 Rmu_sc0001231.1_g000026 Rmu_sc0001231.1_g000028 Rmu_sc0001800.1_g000027 Rmu_sc0003436.1_g000022 Rmu_sc0004104.1_g000004 Rmu_sc0004295.1_g000021 Rmu_sc0004295.1_g000031 Rmu_sc0004928.1_g000002 Rmu_sc0004928.1_g000008 Rmu_sc0004928.1_g000011 Rmu_sc0004928.1_g000027 Rmu_sc0004977.1_g000007 Rmu_sc0005018.1_g000002 Rmu_sc0005091.1_g000026 Rmu_sc0005091.1_g000032 Rmu_sc0005091.1_g000033 Rmu_sc0005817.1_g000003 Rmu_sc0005817.1_g000008 Rmu_sc0012482.1_g000002 Rmu_sc0014210.1_g000001 Rmu_sc0016150.1_g000001 Rmu_sc0029701.1_g000002 Rmu_sc0036585.1_g000001 Rmu_sc0037489.1_g000002
rosa_roxburghii Rroxscaffold_1G00021790 Rroxscaffold_1G00021800 Rroxscaffold_1G00034360 Rroxscaffold_2G00120130 Rroxscaffold_5G00337210 Rroxscaffold_5G00337220 Rroxscaffold_5G00337230 Rroxscaffold_5G00337250 Rroxscaffold_5G00337260 Rroxscaffold_5G00337270 Rroxscaffold_5G00337300 Rroxscaffold_5G00337310 Rroxscaffold_5G00337320 Rroxscaffold_5G00337330 Rroxscaffold_5G00337350 Rroxscaffold_5G00337370 Rroxscaffold_5G00337390 Rroxscaffold_5G00337400 Rroxscaffold_5G00337420 Rroxscaffold_5G00337430 Rroxscaffold_5G00337450 Rroxscaffold_5G00337470 Rroxscaffold_5G00337480 Rroxscaffold_5G00337520 Rroxscaffold_5G00378130 Rroxscaffold_6G00397800 Rroxscaffold_7G00213320 Rroxscaffold_7G00213390 Rroxscaffold_7G00213420 Rroxscaffold_7G00213470
rosa_rugosa Rorug02G0070100 Rorug02G0070100 Rorug02G0070100 Rorug02G0128600 Rorug02G0128700 Rorug02G0128800 Rorug02G0128900 Rorug02G0248400 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337100 Rorug03G0337200 Rorug03G0337300 Rorug03G0337600 Rorug03G0337700 Rorug03G0337800 Rorug03G0337900 Rorug03G0337900 Rorug03G0338000 Rorug03G0338100 Rorug03G0338200 Rorug04G0233200.1 Rorug04G0297900 Rorug05G0233700 Rorug05G0316700 Rorug05G0530800 Rorug05G0530900
rosa_samantha Rh2AG307400 Rh2BG316500 Rh2DG331200 Rh4AG039300 Rh4AG039400 Rh4AG039600 Rh4AG039700 Rh4AG039900 Rh4AG040000 Rh4AG040100 Rh4AG040300 Rh4AG040500 Rh4AG040700 Rh4AG041000 Rh4AG041100 Rh4AG041600 Rh4AG041800 Rh4AG041900 Rh4AG352400 Rh4BG033200 Rh4BG034100 Rh4BG034300 Rh4BG034700 Rh4BG034800 Rh4BG035200 Rh4BG035400 Rh4BG036000 Rh4BG036200 Rh4BG036300 Rh4BG036500 Rh4BG036800 Rh4BG361700 Rh4CG042000 Rh4CG042200 Rh4CG042300 Rh4CG042500 Rh4CG042600 Rh4CG042800 Rh4CG043200 Rh4CG043400 Rh4CG043500 Rh4CG043700 Rh4CG043800 Rh4CG044200 Rh4CG044500 Rh4CG044700 Rh4CG177000 Rh4CG310600 Rh4CG376000 Rh4DG036300 Rh4DG036900 Rh4DG037000 Rh4DG037100 Rh4DG037200 Rh4DG037300 Rh4DG037500 Rh4DG037700 Rh4DG037800 Rh4DG037900 Rh4DG038000 Rh4DG038200 Rh4DG038500 Rh4DG038700 Rh4DG038900 Rh4DG159600 Rh5CG347900 Rh5DG409900 Rh6AG045300 Rh6AG045800 Rh6AG046000 Rh6AG046100 Rh6BG040600 Rh6BG040700 Rh6BG042200 Rh6BG042700 Rh6BG042800 Rh6DG035900 Rh6DG036100 Rh6DG036200
rosa_wichuraiana Rw0G010420 Rw2G024780 Rw4G003020 Rw4G003070 Rw4G003080 Rw4G003090 Rw4G003100 Rw4G003130 Rw4G003140 Rw4G003150 Rw4G003180 Rw4G003190 Rw4G003200 Rw4G003210 Rw4G003220 Rw4G003240 Rw4G003270 Rw4G025050 Rw4G030850 Rw6G003930 Rw6G004000 Rw6G004030 Rw6G004040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 423
Acc16I TGCGCA 2 cut(s) 646, 1056
AccB1I GGYRCC 1 cut(s) 490
AccB7I CCANNNNNTGG 1 cut(s) 322
AclWI GGATC 1 cut(s) 218
AcoI YGGCCR 2 cut(s) 667, 900
AcsI RAATTY 2 cut(s) 921, 964
AcuI CTGAAG 3 cut(s) 169, 621, 650
AdeI CACNNNGTG 2 cut(s) 497, 895
AfaI GTAC 1 cut(s) 234
AfiI CCNNNNNNNGG 6 cut(s) 173, 322, 631, 816, 817, 818
AflIII ACRYGT 1 cut(s) 846
AgsI TTSAA 6 cut(s) 31, 55, 393, 512, 590, 1105
AjnI CCWGG 2 cut(s) 288, 971
AluBI AGCT 8 cut(s) 77, 148, 204, 458, 642, 735, 824, 1108
AluI AGCT 8 cut(s) 77, 148, 204, 458, 642, 735, 824, 1108
Alw21I GWGCWC 4 cut(s) 241, 502, 750, 826
Alw26I GTCTC 3 cut(s) 837, 1025, 1090
AlwI GGATC 1 cut(s) 218
AoxI GGCC 5 cut(s) 652, 667, 769, 900, 983
ApeKI GCWGC 2 cut(s) 455, 642
ApoI RAATTY 2 cut(s) 921, 964
Asp700I GAANNNNTTC 1 cut(s) 255
AspLEI GCGC 2 cut(s) 647, 1057
AspS9I GGNCC 3 cut(s) 652, 757, 914
AsuC2I CCSGG 1 cut(s) 818
AvaII GGWCC 2 cut(s) 757, 914
BaeGI GKGCMC 1 cut(s) 713
BaeI ACNNNNGTAYC 2 cut(s) 172, 205
BalI TGGCCA 2 cut(s) 669, 902
BanI GGYRCC 1 cut(s) 490
BanII GRGCYC 3 cut(s) 615, 826, 1077
BauI CACGAG 2 cut(s) 240, 495
Bbv12I GWGCWC 4 cut(s) 241, 502, 750, 826
BbvI GCAGC 2 cut(s) 467, 629
BccI CCATC 4 cut(s) 17, 167, 332, 1046
BcgI CGANNNNNNTGC 2 cut(s) 249, 283
BciT130I CCWGG 2 cut(s) 290, 973
BciVI GTATCC 2 cut(s) 200, 463
BcnI CCSGG 1 cut(s) 818
BcoDI GTCTC 3 cut(s) 837, 1025, 1090
BfaI CTAG 2 cut(s) 522, 827
BfmI CTRYAG 2 cut(s) 453, 752
BfuI GTATCC 2 cut(s) 200, 463
BisI GCNGC 2 cut(s) 456, 643
BlsI GCNGC 2 cut(s) 457, 644
Bme1390I CCNGG 3 cut(s) 290, 818, 973
Bme18I GGWCC 2 cut(s) 757, 914
BmgT120I GGNCC 3 cut(s) 652, 757, 914
BmiI GGNNCC 3 cut(s) 178, 492, 577
BmrFI CCNGG 3 cut(s) 290, 818, 973
BmrI ACTGGG 2 cut(s) 188, 806
BmsI GCATC 2 cut(s) 88, 222
BmuI ACTGGG 2 cut(s) 188, 806
BplI GAGNNNNNCTC 2 cut(s) 457, 489
BpuEI CTTGAG 1 cut(s) 658
BpuMI CCSGG 1 cut(s) 818
Bsa29I ATCGAT 1 cut(s) 336
BsaAI YACGTR 1 cut(s) 236
BsaBI GATNNNNATC 2 cut(s) 128, 441
BsaI GGTCTC 1 cut(s) 1025
BsaJI CCNNGG 5 cut(s) 119, 301, 705, 817, 927
BsaXI ACNNNNNCTCC 4 cut(s) 813, 843, 986, 1016
Bsc4I CCNNNNNNNGG 6 cut(s) 173, 322, 631, 816, 817, 818
Bse1I ACTGG 5 cut(s) 18, 162, 194, 311, 812
Bse8I GATNNNNATC 2 cut(s) 128, 441
BseBI CCWGG 2 cut(s) 290, 973
BseCI ATCGAT 1 cut(s) 336
BseDI CCNNGG 5 cut(s) 119, 301, 705, 817, 927
BseGI GGATG 2 cut(s) 129, 808
BseJI GATNNNNATC 2 cut(s) 128, 441
BseLI CCNNNNNNNGG 6 cut(s) 173, 322, 631, 816, 817, 818
BseNI ACTGG 5 cut(s) 18, 162, 194, 311, 812
BseRI GAGGAG 1 cut(s) 341
BseSI GKGCMC 1 cut(s) 713
BseXI GCAGC 2 cut(s) 467, 629
BseYI CCCAGC 1 cut(s) 679
BshFI GGCC 5 cut(s) 654, 669, 771, 902, 985
BshNI GGYRCC 1 cut(s) 490
BshVI ATCGAT 1 cut(s) 336
BsiHKAI GWGCWC 4 cut(s) 241, 502, 750, 826
BsiSI CCGG 1 cut(s) 817
BslFI GGGAC 2 cut(s) 102, 410
BslI CCNNNNNNNGG 6 cut(s) 173, 322, 631, 816, 817, 818
BsmAI GTCTC 3 cut(s) 837, 1025, 1090
BsmFI GGGAC 2 cut(s) 102, 410
BsnI GGCC 5 cut(s) 654, 669, 771, 902, 985
Bso31I GGTCTC 1 cut(s) 1025
Bsp1286I GDGCHC 7 cut(s) 241, 502, 615, 713, 750, 826, 1077
Bsp143I GATC 4 cut(s) 223, 333, 436, 790
Bsp19I CCATGG 2 cut(s) 301, 705
BspANI GGCC 5 cut(s) 654, 669, 771, 902, 985
BspDI ATCGAT 1 cut(s) 336
BspHI TCATGA 1 cut(s) 355
BspLI GGNNCC 3 cut(s) 178, 492, 577
BspMAI CTGCAG 1 cut(s) 457
BspPI GGATC 1 cut(s) 218
BspT107I GGYRCC 1 cut(s) 490
BspTNI GGTCTC 1 cut(s) 1025
BsrI ACTGG 5 cut(s) 18, 162, 194, 311, 812
BssECI CCNNGG 5 cut(s) 119, 301, 705, 817, 927
BssMI GATC 4 cut(s) 223, 333, 436, 790
BssSI CACGAG 2 cut(s) 240, 495
BssT1I CCWWGG 3 cut(s) 119, 301, 705
Bst2BI CACGAG 2 cut(s) 240, 495
Bst2UI CCWGG 2 cut(s) 290, 973
Bst4CI ACNGT 3 cut(s) 232, 745, 855
Bst6I CTCTTC 1 cut(s) 507
BstAPI GCANNNNNTGC 1 cut(s) 497
BstBAI YACGTR 1 cut(s) 236
BstC8I GCNNGC 3 cut(s) 268, 453, 685
BstDEI CTNAG 1 cut(s) 205
BstDSI CCRYGG 3 cut(s) 301, 705, 927
BstF5I GGATG 2 cut(s) 129, 808
BstHHI GCGC 2 cut(s) 647, 1057
BstKTI GATC 4 cut(s) 226, 336, 439, 793
BstMAI GTCTC 3 cut(s) 837, 1025, 1090
BstMBI GATC 4 cut(s) 223, 333, 436, 790
BstMWI GCNNNNNNNGC 5 cut(s) 107, 210, 497, 575, 651
BstNI CCWGG 2 cut(s) 290, 973
BstNSI RCATGY 3 cut(s) 266, 687, 850
BstSCI CCNGG 3 cut(s) 288, 816, 971
BstSFI CTRYAG 2 cut(s) 453, 752
BstSLI GKGCMC 1 cut(s) 713
BstV1I GCAGC 2 cut(s) 467, 629
BstX2I RGATCY 1 cut(s) 223
BstXI CCANNNNNNTGG 1 cut(s) 767
BstYI RGATCY 1 cut(s) 223
Bsu15I ATCGAT 1 cut(s) 336
BsuI GTATCC 2 cut(s) 200, 463
BsuRI GGCC 5 cut(s) 654, 669, 771, 902, 985
BsuTUI ATCGAT 1 cut(s) 336
BtgI CCRYGG 3 cut(s) 301, 705, 927
BtsCI GGATG 2 cut(s) 129, 808
BtsIMutI CAGTG 3 cut(s) 25, 750, 800
Cac8I GCNNGC 3 cut(s) 268, 453, 685
CciI TCATGA 1 cut(s) 355
CfoI GCGC 2 cut(s) 647, 1057
Cfr13I GGNCC 3 cut(s) 652, 757, 914
ClaI ATCGAT 1 cut(s) 336
Csp6I GTAC 1 cut(s) 233
CspCI CAANNNNNGTGG 2 cut(s) 568, 603
CviQI GTAC 1 cut(s) 233
DdeI CTNAG 1 cut(s) 205
DpnI GATC 4 cut(s) 225, 335, 438, 792
DpnII GATC 4 cut(s) 223, 333, 436, 790
DraIII CACNNNGTG 2 cut(s) 497, 895
EaeI YGGCCR 2 cut(s) 667, 900
Eam1104I CTCTTC 1 cut(s) 507
EarI CTCTTC 1 cut(s) 507
Ecl136II GAGCTC 1 cut(s) 824
Eco130I CCWWGG 3 cut(s) 119, 301, 705
Eco24I GRGCYC 3 cut(s) 615, 826, 1077
Eco31I GGTCTC 1 cut(s) 1025
Eco47I GGWCC 2 cut(s) 757, 914
Eco53kI GAGCTC 1 cut(s) 824
Eco57I CTGAAG 3 cut(s) 169, 621, 650
EcoICRI GAGCTC 1 cut(s) 824
EcoO109I RGGNCCY 1 cut(s) 652
EcoRII CCWGG 2 cut(s) 288, 971
EcoT14I CCWWGG 3 cut(s) 119, 301, 705
EcoT38I GRGCYC 3 cut(s) 615, 826, 1077
ErhI CCWWGG 3 cut(s) 119, 301, 705
FaqI GGGAC 2 cut(s) 102, 410
Fnu4HI GCNGC 2 cut(s) 456, 643
FokI GGATG 2 cut(s) 116, 815
FriOI GRGCYC 3 cut(s) 615, 826, 1077
Fsp4HI GCNGC 2 cut(s) 456, 643
FspBI CTAG 2 cut(s) 522, 827
FspI TGCGCA 2 cut(s) 646, 1056
GlaI GCGC 2 cut(s) 646, 1056
GluI GCNGC 2 cut(s) 456, 643
GsaI CCCAGC 1 cut(s) 683
HaeIII GGCC 5 cut(s) 654, 669, 771, 902, 985
HapII CCGG 1 cut(s) 817
HhaI GCGC 2 cut(s) 647, 1057
Hin6I GCGC 2 cut(s) 645, 1055
HinP1I GCGC 2 cut(s) 645, 1055
HincII GTYRAC 1 cut(s) 298
HindII GTYRAC 1 cut(s) 298
HindIII AAGCTT 2 cut(s) 202, 1106
HinfI GANTC 5 cut(s) 27, 68, 90, 307, 1012
HpaII CCGG 1 cut(s) 817
Hpy166II GTNNAC 1 cut(s) 298
Hpy188I TCNGA 4 cut(s) 556, 601, 727, 1006
Hpy188III TCNNGA 2 cut(s) 356, 509
Hpy8I GTNNAC 1 cut(s) 298
HpyAV CCTTC 4 cut(s) 49, 373, 559, 625
HpyCH4III ACNGT 3 cut(s) 232, 745, 855
HpyCH4IV ACGT 1 cut(s) 235
HpyCH4V TGCA 2 cut(s) 455, 531
HpyF10VI GCNNNNNNNGC 5 cut(s) 107, 210, 497, 575, 651
HpyF3I CTNAG 1 cut(s) 205
HpySE526I ACGT 1 cut(s) 235
HspAI GCGC 2 cut(s) 645, 1055
Kzo9I GATC 4 cut(s) 223, 333, 436, 790
LmnI GCTCC 4 cut(s) 505, 575, 753, 821
Lsp1109I GCAGC 2 cut(s) 467, 629
LweI GCATC 2 cut(s) 88, 222
MaeI CTAG 2 cut(s) 522, 827
MaeII ACGT 1 cut(s) 235
MaeIII GTNAC 2 cut(s) 805, 849
MalI GATC 4 cut(s) 225, 335, 438, 792
MboI GATC 4 cut(s) 223, 333, 436, 790
MboII GAAGA 6 cut(s) 124, 388, 524, 800, 944, 960
MflI RGATCY 1 cut(s) 223
MhlI GDGCHC 7 cut(s) 241, 502, 615, 713, 750, 826, 1077
MlsI TGGCCA 2 cut(s) 669, 902
MluNI TGGCCA 2 cut(s) 669, 902
MlyI GAGTC 2 cut(s) 62, 84
MmeI TCCRAC 2 cut(s) 204, 251
Mox20I TGGCCA 2 cut(s) 669, 902
MroXI GAANNNNTTC 1 cut(s) 255
MscI TGGCCA 2 cut(s) 669, 902
MseI TTAA 3 cut(s) 84, 857, 990
Msp20I TGGCCA 2 cut(s) 669, 902
MspI CCGG 1 cut(s) 817
MspR9I CCNGG 3 cut(s) 290, 818, 973
MvaI CCWGG 2 cut(s) 290, 973
MwoI GCNNNNNNNGC 5 cut(s) 107, 210, 497, 575, 651
NciI CCSGG 1 cut(s) 818
NcoI CCATGG 2 cut(s) 301, 705
NdeII GATC 4 cut(s) 223, 333, 436, 790
NlaIV GGNNCC 3 cut(s) 178, 492, 577
NmeAIII GCCGAG 1 cut(s) 1067
NsbI TGCGCA 2 cut(s) 646, 1056
NspI RCATGY 3 cut(s) 266, 687, 850
PaeI GCATGC 1 cut(s) 687
PagI TCATGA 1 cut(s) 355
PciI ACATGT 1 cut(s) 846
PdmI GAANNNNTTC 1 cut(s) 255
PfeI GAWTC 3 cut(s) 27, 307, 1012
PflMI CCANNNNNTGG 1 cut(s) 322
PkrI GCNGC 2 cut(s) 457, 644
PleI GAGTC 2 cut(s) 62, 84
PpsI GAGTC 2 cut(s) 62, 84
Ppu21I YACGTR 1 cut(s) 236
PscI ACATGT 1 cut(s) 846
PsiI TTATAA 1 cut(s) 423
Psp124BI GAGCTC 1 cut(s) 826
Psp6I CCWGG 2 cut(s) 288, 971
PspFI CCCAGC 1 cut(s) 679
PspGI CCWGG 2 cut(s) 288, 971
PspN4I GGNNCC 3 cut(s) 178, 492, 577
PspPI GGNCC 3 cut(s) 652, 757, 914
PstI CTGCAG 1 cut(s) 457
PsuI RGATCY 1 cut(s) 223
RsaI GTAC 1 cut(s) 234
RsaNI GTAC 1 cut(s) 233
SacI GAGCTC 1 cut(s) 826
SaqAI TTAA 3 cut(s) 84, 857, 990
SatI GCNGC 2 cut(s) 456, 643
Sau3AI GATC 4 cut(s) 223, 333, 436, 790
Sau96I GGNCC 3 cut(s) 652, 757, 914
SchI GAGTC 2 cut(s) 62, 84
ScrFI CCNGG 3 cut(s) 290, 818, 973
SduI GDGCHC 7 cut(s) 241, 502, 615, 713, 750, 826, 1077
SfaNI GCATC 2 cut(s) 88, 222
SfcI CTRYAG 2 cut(s) 453, 752
SinI GGWCC 2 cut(s) 757, 914
SmlI CTYRAG 1 cut(s) 637
SmoI CTYRAG 1 cut(s) 637
SphI GCATGC 1 cut(s) 687
SspI AATATT 1 cut(s) 1100
SspMI CTAG 2 cut(s) 522, 827
SstI GAGCTC 1 cut(s) 826
StyD4I CCNGG 3 cut(s) 288, 816, 971
StyI CCWWGG 3 cut(s) 119, 301, 705
TaaI ACNGT 3 cut(s) 232, 745, 855
TaiI ACGT 1 cut(s) 238
TaqI TCGA 3 cut(s) 249, 259, 336
TfiI GAWTC 3 cut(s) 27, 307, 1012
Tru1I TTAA 3 cut(s) 84, 857, 990
Tru9I TTAA 3 cut(s) 84, 857, 990
TscAI CASTG 3 cut(s) 25, 750, 800
TseI GCWGC 2 cut(s) 455, 642
TspDTI ATGAA 5 cut(s) 118, 150, 344, 801, 865
TspGWI ACGGA 1 cut(s) 916
TspRI CASTG 3 cut(s) 25, 750, 800
Van91I CCANNNNNTGG 1 cut(s) 322
VpaK11BI GGWCC 2 cut(s) 757, 914
XapI RAATTY 2 cut(s) 921, 964
XceI RCATGY 3 cut(s) 266, 687, 850
XmnI GAANNNNTTC 1 cut(s) 255
XspI CTAG 2 cut(s) 522, 827
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.