MD16G1215500.v1.1

Belongs to the iron ascorbate-dependent oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
OG0000054
Physical Location & Seq
Forward (+)
20995728 .. 20998705
2978 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1215500.v1.1.491

Sequence Viewer

Length: 579 bp
ATGATCTCCGGGAACTCAATAAACCAAGACAGCCTTCAACAACTAAAGGCCTTTGACCAATCCAAAGCTGGTGTCAAAGGGATCGTTGACAAAGGAATCACCAAAATCCCACCCATTTTCATCCGGCCGCCGGAAGATTCCGCCGGCGACAACCCAAGTTCCCGCCAACCAACCCAAGCCCATTTCAGTATTCCTGTCGTGGACCTTGATGACACTGTCGGCAGGCACGATGACGTTGTTACCAGAGTCCGGCGGGCCGCAGAGACTGTTGGTTTTTTTCAGGTGGTGAACCATGGGATTCCCCAGAGAGTGTTGGACGAGATGTTGGAAGCGGCACGTGGGTTCCACGAGCAGCCAAGGGAGGTGAAGGCCGAGTACTATAGTAGGGAGCTGATGAGGAAAGTCAAGTTTGGGAGTAACTTTGATCTATATCAGTCAAGGTTTGCCAATTGGAGGGACAGTTTGTTTTGTGTGATGGGTCCTGAGCCTCTTGATCCTCAAGAATTGCCGGTGGTTTGCAGCGGGCTCCCGGGACGAAGGGGACGCCGGGCCCGGAGGCCCGCCGACCCCCGACGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2OG-FeII_Oxy DIOX_N

Protein Analysis

193

Amino Acids

21.65

Weight (kDa)

9.26

Isoelectric Point (pI)

47.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 64 - 160 7.6e-19 non-haem dioxygenase in morphine synthesis N-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000054)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03400 AT1G03400 AT1G03410 AT1G03410 AT1G04350 AT1G06620 AT1G06620 AT1G06640 AT1G06640 AT1G06640 AT1G06645 AT1G06650 AT1G06650 AT2G25450 AT2G30830 AT2G30840 AT2G30840 AT2G30840 AT3G61400 AT3G61400 AT5G43440 AT5G43440 AT5G43450 AT5G43450 AT5G59530 AT5G59540 AT5G59540
fragaria_vesca FvH4_2g03190 FvH4_2g03220 FvH4_3g07861 FvH4_3g31880 FvH4_3g31880 FvH4_3g31880 FvH4_4g03241 FvH4_4g03250 FvH4_4g03251 FvH4_4g03260 FvH4_4g03300 FvH4_4g03301 FvH4_4g03301 FvH4_4g03301 FvH4_4g03302 FvH4_4g03303 FvH4_4g03303 FvH4_4g03304 FvH4_4g03305 FvH4_4g03323 FvH4_4g03323 FvH4_5g19290 FvH4_5g19290 FvH4_5g19290 FvH4_5g19291 FvH4_5g19291 FvH4_5g19310 FvH4_5g19310 FvH4_5g19310 FvH4_5g19320 FvH4_5g19321 FvH4_5g19321 FvH4_5g19321 FvH4_7g31470
malus_domestica MD00G1220300.v1.1 MD02G1050800.v1.1 MD02G1053200.v1.1 MD02G1053300.v1.1 MD02G1054900.v1.1 MD03G1032300.v1.1 MD03G1245000.v1.1 MD03G1245300.v1.1 MD05G1014200.v1.1 MD13G1210900.v1.1 MD13G1211000.v1.1 MD13G1211100.v1.1 MD13G1211200.v1.1 MD13G1211800.v1.1 MD13G1211900.v1.1 MD13G1212000.v1.1 MD16G1214100.v1.1 MD16G1214300.v1.1 MD16G1214400.v1.1 MD16G1214600.v1.1 MD16G1215000.v1.1 MD16G1215200.v1.1 MD16G1215300.v1.1 MD16G1215500.v1.1 MD16G1271000.v1.1
prunus_persica Prupe.1G035500_v2.0.a1 Prupe.1G035700_v2.0.a1 Prupe.1G035800_v2.0.a1 Prupe.1G035900_v2.0.a1 Prupe.1G036000_v2.0.a1 Prupe.1G036100_v2.0.a1 Prupe.1G036200_v2.0.a1 Prupe.1G036400_v2.0.a1 Prupe.1G036500_v2.0.a1 Prupe.1G036600_v2.0.a1 Prupe.1G036700_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G191000_v2.0.a1 Prupe.1G191100_v2.0.a1
pyrus_communis pycom13g18340 pycom13g18350 pycom13g18380 pycom16g17990 pycom16g18010 pycom16g18020
rosa_chinensis RchiOBHm_Chr2g0124051 RchiOBHm_Chr4g0391811 RchiOBHm_Chr4g0391931 RchiOBHm_Chr4g0391961 RchiOBHm_Chr4g0391971 RchiOBHm_Chr4g0391981 RchiOBHm_Chr4g0391991 RchiOBHm_Chr4g0392031 RchiOBHm_Chr4g0392051 RchiOBHm_Chr4g0392061 RchiOBHm_Chr4g0392071 RchiOBHm_Chr4g0392081 RchiOBHm_Chr4g0392091 RchiOBHm_Chr4g0392111 RchiOBHm_Chr4g0392121 RchiOBHm_Chr4g0392131 RchiOBHm_Chr4g0392141 RchiOBHm_Chr4g0392151 RchiOBHm_Chr4g0392211 RchiOBHm_Chr4g0392251 RchiOBHm_Chr4g0392261 RchiOBHm_Chr4g0392301 RchiOBHm_Chr4g0392311 RchiOBHm_Chr4g0392341 RchiOBHm_Chr4g0409221 RchiOBHm_Chr4g0410991 RchiOBHm_Chr4g0429131 RchiOBHm_Chr4g0437051 RchiOBHm_Chr5g0038681 RchiOBHm_Chr5g0047071 RchiOBHm_Chr5g0058651 RchiOBHm_Chr6g0248121 RchiOBHm_Chr6g0248141 RchiOBHm_Chr6g0248291 RchiOBHm_Chr6g0248341 RchiOBHm_Chr6g0248351
rosa_laevigata RLG00000006473 RLG00000006475 RLG00000006667 RLG00000007095 RLG00000009819 RLG00000009820 RLG00000009821 RLG00000009822 RLG00000009825 RLG00000009826 RLG00000009830 RLG00000009831 RLG00000009832 RLG00000009833 RLG00000009834 RLG00000009835 RLG00000009837 RLG00000009838 RLG00000009839 RLG00000009841 RLG00000009842 RLG00000009844 RLG00000009845 RLG00000009846 RLG00000009847 RLG00000009848 RLG00000009849 RLG00000015160 RLG00000015161 RLG00000017791 RLG00000018779 RLG00000034461 RLG00000035237
rosa_multiflora Rmu_co8253791.1_g000001 Rmu_co8348827.1_g000001 Rmu_co8400489.1_g000001 Rmu_sc0000383.1_g000003 Rmu_sc0000383.1_g000005 Rmu_sc0000383.1_g000026 Rmu_sc0000846.1_g000012 Rmu_sc0001231.1_g000013 Rmu_sc0001231.1_g000026 Rmu_sc0001231.1_g000028 Rmu_sc0001800.1_g000027 Rmu_sc0003436.1_g000022 Rmu_sc0004104.1_g000004 Rmu_sc0004295.1_g000021 Rmu_sc0004295.1_g000031 Rmu_sc0004928.1_g000002 Rmu_sc0004928.1_g000008 Rmu_sc0004928.1_g000011 Rmu_sc0004928.1_g000027 Rmu_sc0004977.1_g000007 Rmu_sc0005018.1_g000002 Rmu_sc0005091.1_g000026 Rmu_sc0005091.1_g000032 Rmu_sc0005091.1_g000033 Rmu_sc0005817.1_g000003 Rmu_sc0005817.1_g000008 Rmu_sc0012482.1_g000002 Rmu_sc0014210.1_g000001 Rmu_sc0016150.1_g000001 Rmu_sc0029701.1_g000002 Rmu_sc0036585.1_g000001 Rmu_sc0037489.1_g000002
rosa_roxburghii Rroxscaffold_1G00021790 Rroxscaffold_1G00021800 Rroxscaffold_1G00034360 Rroxscaffold_2G00120130 Rroxscaffold_5G00337210 Rroxscaffold_5G00337220 Rroxscaffold_5G00337230 Rroxscaffold_5G00337250 Rroxscaffold_5G00337260 Rroxscaffold_5G00337270 Rroxscaffold_5G00337300 Rroxscaffold_5G00337310 Rroxscaffold_5G00337320 Rroxscaffold_5G00337330 Rroxscaffold_5G00337350 Rroxscaffold_5G00337370 Rroxscaffold_5G00337390 Rroxscaffold_5G00337400 Rroxscaffold_5G00337420 Rroxscaffold_5G00337430 Rroxscaffold_5G00337450 Rroxscaffold_5G00337470 Rroxscaffold_5G00337480 Rroxscaffold_5G00337520 Rroxscaffold_5G00378130 Rroxscaffold_6G00397800 Rroxscaffold_7G00213320 Rroxscaffold_7G00213390 Rroxscaffold_7G00213420 Rroxscaffold_7G00213470
rosa_rugosa Rorug02G0070100 Rorug02G0070100 Rorug02G0070100 Rorug02G0128600 Rorug02G0128700 Rorug02G0128800 Rorug02G0128900 Rorug02G0248400 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337100 Rorug03G0337200 Rorug03G0337300 Rorug03G0337600 Rorug03G0337700 Rorug03G0337800 Rorug03G0337900 Rorug03G0337900 Rorug03G0338000 Rorug03G0338100 Rorug03G0338200 Rorug04G0233200.1 Rorug04G0297900 Rorug05G0233700 Rorug05G0316700 Rorug05G0530800 Rorug05G0530900
rosa_samantha Rh2AG307400 Rh2BG316500 Rh2DG331200 Rh4AG039300 Rh4AG039400 Rh4AG039600 Rh4AG039700 Rh4AG039900 Rh4AG040000 Rh4AG040100 Rh4AG040300 Rh4AG040500 Rh4AG040700 Rh4AG041000 Rh4AG041100 Rh4AG041600 Rh4AG041800 Rh4AG041900 Rh4AG352400 Rh4BG033200 Rh4BG034100 Rh4BG034300 Rh4BG034700 Rh4BG034800 Rh4BG035200 Rh4BG035400 Rh4BG036000 Rh4BG036200 Rh4BG036300 Rh4BG036500 Rh4BG036800 Rh4BG361700 Rh4CG042000 Rh4CG042200 Rh4CG042300 Rh4CG042500 Rh4CG042600 Rh4CG042800 Rh4CG043200 Rh4CG043400 Rh4CG043500 Rh4CG043700 Rh4CG043800 Rh4CG044200 Rh4CG044500 Rh4CG044700 Rh4CG177000 Rh4CG310600 Rh4CG376000 Rh4DG036300 Rh4DG036900 Rh4DG037000 Rh4DG037100 Rh4DG037200 Rh4DG037300 Rh4DG037500 Rh4DG037700 Rh4DG037800 Rh4DG037900 Rh4DG038000 Rh4DG038200 Rh4DG038500 Rh4DG038700 Rh4DG038900 Rh4DG159600 Rh5CG347900 Rh5DG409900 Rh6AG045300 Rh6AG045800 Rh6AG046000 Rh6AG046100 Rh6BG040600 Rh6BG040700 Rh6BG042200 Rh6BG042700 Rh6BG042800 Rh6DG035900 Rh6DG036100 Rh6DG036200
rosa_wichuraiana Rw0G010420 Rw2G024780 Rw4G003020 Rw4G003070 Rw4G003080 Rw4G003090 Rw4G003100 Rw4G003130 Rw4G003140 Rw4G003150 Rw4G003180 Rw4G003190 Rw4G003200 Rw4G003210 Rw4G003220 Rw4G003240 Rw4G003270 Rw4G025050 Rw4G030850 Rw6G003930 Rw6G004000 Rw6G004030 Rw6G004040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 8 cut(s) 128, 141, 163, 253, 258, 332, 522, 561
AclWI GGATC 2 cut(s) 89, 488
AcoI YGGCCR 1 cut(s) 125
AcvI CACGTG 1 cut(s) 338
AcyI GRCGYC 1 cut(s) 544
AfaI GTAC 1 cut(s) 377
AfiI CCNNNNNNNGG 3 cut(s) 130, 249, 453
AgsI TTSAA 1 cut(s) 38
AjuI GAANNNNNNNTTGG 2 cut(s) 18, 50
AluBI AGCT 2 cut(s) 68, 391
AluI AGCT 2 cut(s) 68, 391
Alw26I GTCTC 1 cut(s) 257
AlwI GGATC 2 cut(s) 89, 488
AlwNI CAGNNNCTG 1 cut(s) 266
Ama87I CYCGRG 1 cut(s) 529
AoxI GGCC 6 cut(s) 48, 125, 255, 369, 549, 557
ApaI GGGCCC 1 cut(s) 553
ApeKI GCWGC 2 cut(s) 352, 519
ArsI GACNNNNNNTTYG 2 cut(s) 57, 89
AspS9I GGNCC 6 cut(s) 202, 255, 479, 549, 550, 558
AsuC2I CCSGG 5 cut(s) 10, 530, 531, 548, 553
AsuHPI GGTGA 3 cut(s) 91, 298, 376
AvaI CYCGRG 1 cut(s) 529
AvaII GGWCC 2 cut(s) 202, 479
BaeGI GKGCMC 1 cut(s) 553
BanII GRGCYC 2 cut(s) 528, 553
BarI GAAGNNNNNNTAC 2 cut(s) 359, 391
BauI CACGAG 1 cut(s) 347
BbrPI CACGTG 1 cut(s) 338
BbvI GCAGC 2 cut(s) 364, 531
BccI CCATC 1 cut(s) 469
BcnI CCSGG 5 cut(s) 10, 530, 531, 548, 553
BcoDI GTCTC 1 cut(s) 257
BfmI CTRYAG 1 cut(s) 379
BisI GCNGC 5 cut(s) 128, 258, 333, 353, 520
BlsI GCNGC 5 cut(s) 129, 259, 334, 354, 521
BmcAI AGTACT 1 cut(s) 377
Bme1390I CCNGG 5 cut(s) 10, 530, 531, 548, 553
Bme18I GGWCC 2 cut(s) 202, 479
BmeT110I CYCGRG 1 cut(s) 529
BmgT120I GGNCC 6 cut(s) 202, 255, 479, 549, 550, 558
BmiI GGNNCC 4 cut(s) 344, 480, 527, 551
BmrFI CCNGG 5 cut(s) 10, 530, 531, 548, 553
Bpu10I CCTNAGC 1 cut(s) 483
BpuEI CTTGAG 1 cut(s) 483
BpuMI CCSGG 5 cut(s) 10, 530, 531, 548, 553
BsaAI YACGTR 1 cut(s) 338
BsaBI GATNNNNATC 1 cut(s) 429
BsaHI GRCGYC 1 cut(s) 544
BsaJI CCNNGG 3 cut(s) 292, 356, 529
BsaXI ACNNNNNCTCC 2 cut(s) 445, 475
Bsc4I CCNNNNNNNGG 3 cut(s) 130, 249, 453
Bse118I RCCGGY 2 cut(s) 143, 508
Bse8I GATNNNNATC 1 cut(s) 429
BseDI CCNNGG 3 cut(s) 292, 356, 529
BseGI GGATG 1 cut(s) 120
BseJI GATNNNNATC 1 cut(s) 429
BseLI CCNNNNNNNGG 3 cut(s) 130, 249, 453
BseMII CTCAG 1 cut(s) 474
BseSI GKGCMC 1 cut(s) 553
BseX3I CGGCCG 1 cut(s) 125
BseXI GCAGC 2 cut(s) 364, 531
Bsh1285I CGRYCG 1 cut(s) 128
BshFI GGCC 6 cut(s) 50, 127, 257, 371, 551, 559
BsiEI CGRYCG 1 cut(s) 128
BsiHKCI CYCGRG 1 cut(s) 529
BsiSI CCGG 9 cut(s) 9, 124, 131, 144, 250, 509, 530, 547, 553
BslFI GGGAC 3 cut(s) 470, 546, 555
BslI CCNNNNNNNGG 3 cut(s) 130, 249, 453
BsmAI GTCTC 1 cut(s) 257
BsmFI GGGAC 3 cut(s) 470, 546, 555
BsnI GGCC 6 cut(s) 50, 127, 257, 371, 551, 559
BsoBI CYCGRG 1 cut(s) 529
Bsp120I GGGCCC 1 cut(s) 549
Bsp1286I GDGCHC 2 cut(s) 528, 553
Bsp143I GATC 4 cut(s) 3, 81, 424, 493
Bsp19I CCATGG 1 cut(s) 292
BspACI CCGC 8 cut(s) 128, 141, 163, 253, 258, 332, 522, 561
BspANI GGCC 6 cut(s) 50, 127, 257, 371, 551, 559
BspCNI CTCAG 1 cut(s) 475
BspLI GGNNCC 4 cut(s) 344, 480, 527, 551
BspPI GGATC 2 cut(s) 89, 488
BsrFI RCCGGY 2 cut(s) 143, 508
BssAI RCCGGY 2 cut(s) 143, 508
BssECI CCNNGG 3 cut(s) 292, 356, 529
BssMI GATC 4 cut(s) 3, 81, 424, 493
BssNI GRCGYC 1 cut(s) 544
BssSI CACGAG 1 cut(s) 347
BssT1I CCWWGG 2 cut(s) 292, 356
Bst2BI CACGAG 1 cut(s) 347
Bst4CI ACNGT 3 cut(s) 217, 268, 461
BstACI GRCGYC 1 cut(s) 544
BstBAI YACGTR 1 cut(s) 338
BstC8I GCNNGC 5 cut(s) 145, 224, 255, 524, 561
BstDEI CTNAG 1 cut(s) 483
BstDSI CCRYGG 1 cut(s) 292
BstF5I GGATG 1 cut(s) 120
BstKTI GATC 4 cut(s) 6, 84, 427, 496
BstMAI GTCTC 1 cut(s) 257
BstMBI GATC 4 cut(s) 3, 81, 424, 493
BstMCI CGRYCG 1 cut(s) 128
BstSCI CCNGG 5 cut(s) 8, 528, 529, 546, 551
BstSFI CTRYAG 1 cut(s) 379
BstSLI GKGCMC 1 cut(s) 553
BstV1I GCAGC 2 cut(s) 364, 531
BstZI CGGCCG 1 cut(s) 125
BsuRI GGCC 6 cut(s) 50, 127, 257, 371, 551, 559
BtgI CCRYGG 1 cut(s) 292
BtsCI GGATG 1 cut(s) 120
BtsIMutI CAGTG 1 cut(s) 213
Cac8I GCNNGC 5 cut(s) 145, 224, 255, 524, 561
CaiI CAGNNNCTG 1 cut(s) 266
Cfr10I RCCGGY 2 cut(s) 143, 508
Cfr13I GGNCC 6 cut(s) 202, 255, 479, 549, 550, 558
Cfr9I CCCGGG 1 cut(s) 529
CseI GACGC 1 cut(s) 552
Csp6I GTAC 1 cut(s) 376
CviAII CATG 1 cut(s) 293
CviQI GTAC 1 cut(s) 376
DdeI CTNAG 1 cut(s) 483
DpnI GATC 4 cut(s) 5, 83, 426, 495
DpnII GATC 4 cut(s) 3, 81, 424, 493
EaeI YGGCCR 1 cut(s) 125
EagI CGGCCG 1 cut(s) 125
EciI GGCGGA 1 cut(s) 130
EclXI CGGCCG 1 cut(s) 125
Eco130I CCWWGG 2 cut(s) 292, 356
Eco147I AGGCCT 1 cut(s) 50
Eco24I GRGCYC 2 cut(s) 528, 553
Eco47I GGWCC 2 cut(s) 202, 479
Eco52I CGGCCG 1 cut(s) 125
Eco72I CACGTG 1 cut(s) 338
Eco88I CYCGRG 1 cut(s) 529
EcoO109I RGGNCCY 1 cut(s) 479
EcoT14I CCWWGG 2 cut(s) 292, 356
EcoT38I GRGCYC 2 cut(s) 528, 553
ErhI CCWWGG 2 cut(s) 292, 356
FaeI CATG 1 cut(s) 296
FaiI YATR 3 cut(s) 294, 381, 430
FalI AAGNNNNNCTT 2 cut(s) 18, 50
FaqI GGGAC 3 cut(s) 470, 546, 555
FatI CATG 1 cut(s) 292
FauI CCCGC 4 cut(s) 170, 246, 515, 568
Fnu4HI GCNGC 5 cut(s) 128, 258, 333, 353, 520
FokI GGATG 1 cut(s) 107
FriOI GRGCYC 2 cut(s) 528, 553
Fsp4HI GCNGC 5 cut(s) 128, 258, 333, 353, 520
GluI GCNGC 5 cut(s) 128, 258, 333, 353, 520
HaeIII GGCC 6 cut(s) 50, 127, 257, 371, 551, 559
HapII CCGG 9 cut(s) 9, 124, 131, 144, 250, 509, 530, 547, 553
HgaI GACGC 1 cut(s) 552
Hin1I GRCGYC 1 cut(s) 544
Hin1II CATG 1 cut(s) 296
HincII GTYRAC 1 cut(s) 88
HindII GTYRAC 1 cut(s) 88
HinfI GANTC 4 cut(s) 96, 137, 246, 298
HpaII CCGG 9 cut(s) 9, 124, 131, 144, 250, 509, 530, 547, 553
HphI GGTGA 3 cut(s) 91, 298, 376
Hpy166II GTNNAC 3 cut(s) 88, 202, 289
Hpy188III TCNNGA 3 cut(s) 482, 491, 500
Hpy8I GTNNAC 3 cut(s) 88, 202, 289
Hpy99I CGWCG 1 cut(s) 576
HpyAV CCTTC 3 cut(s) 44, 361, 531
HpyCH4III ACNGT 3 cut(s) 217, 268, 461
HpyCH4IV ACGT 3 cut(s) 234, 337, 574
HpyCH4V TGCA 1 cut(s) 519
HpyF3I CTNAG 1 cut(s) 483
HpySE526I ACGT 3 cut(s) 234, 337, 574
Hsp92I GRCGYC 1 cut(s) 544
Hsp92II CATG 1 cut(s) 296
KroI GCCGGC 1 cut(s) 143
KroNI GCCGGC 1 cut(s) 145
Kzo9I GATC 4 cut(s) 3, 81, 424, 493
LmnI GCTCC 2 cut(s) 388, 531
Lsp1109I GCAGC 2 cut(s) 364, 531
MaeII ACGT 3 cut(s) 234, 337, 574
MaeIII GTNAC 2 cut(s) 238, 416
MalI GATC 4 cut(s) 5, 83, 426, 495
MboI GATC 4 cut(s) 3, 81, 424, 493
MboII GAAGA 1 cut(s) 146
MfeI CAATTG 1 cut(s) 448
MhlI GDGCHC 2 cut(s) 528, 553
MluCI AATT 2 cut(s) 448, 503
MlyI GAGTC 1 cut(s) 255
MmeI TCCRAC 2 cut(s) 294, 306
MnlI CCTC 6 cut(s) 355, 390, 447, 498, 507, 549
MreI CGCCGGCG 1 cut(s) 143
MroNI GCCGGC 1 cut(s) 143
MspA1I CMGCKG 1 cut(s) 522
MspI CCGG 9 cut(s) 9, 124, 131, 144, 250, 509, 530, 547, 553
MspR9I CCNGG 5 cut(s) 10, 530, 531, 548, 553
MunI CAATTG 1 cut(s) 448
NaeI GCCGGC 1 cut(s) 145
NciI CCSGG 5 cut(s) 10, 530, 531, 548, 553
NcoI CCATGG 1 cut(s) 292
NdeII GATC 4 cut(s) 3, 81, 424, 493
NgoMIV GCCGGC 1 cut(s) 143
NlaIII CATG 1 cut(s) 296
NlaIV GGNNCC 4 cut(s) 344, 480, 527, 551
NmeAIII GCCGAG 1 cut(s) 397
PceI AGGCCT 1 cut(s) 50
PcsI WCGNNNNNNNCGW 1 cut(s) 225
PdiI GCCGGC 1 cut(s) 145
PfeI GAWTC 3 cut(s) 96, 137, 298
PflFI GACNNNGTC 1 cut(s) 215
PfoI TCCNGGA 1 cut(s) 8
PkrI GCNGC 5 cut(s) 129, 259, 334, 354, 521
PleI GAGTC 1 cut(s) 254
PmaCI CACGTG 1 cut(s) 338
PmlI CACGTG 1 cut(s) 338
PpsI GAGTC 1 cut(s) 254
Ppu21I YACGTR 1 cut(s) 338
PpuMI RGGWCCY 1 cut(s) 479
Psp5II RGGWCCY 1 cut(s) 479
PspCI CACGTG 1 cut(s) 338
PspN4I GGNNCC 4 cut(s) 344, 480, 527, 551
PspOMI GGGCCC 1 cut(s) 549
PspPI GGNCC 6 cut(s) 202, 255, 479, 549, 550, 558
PspPPI RGGWCCY 1 cut(s) 479
PstNI CAGNNNCTG 1 cut(s) 266
PsyI GACNNNGTC 1 cut(s) 215
RsaI GTAC 1 cut(s) 377
RsaNI GTAC 1 cut(s) 376
SatI GCNGC 5 cut(s) 128, 258, 333, 353, 520
Sau3AI GATC 4 cut(s) 3, 81, 424, 493
Sau96I GGNCC 6 cut(s) 202, 255, 479, 549, 550, 558
ScaI AGTACT 1 cut(s) 377
SchI GAGTC 1 cut(s) 255
ScrFI CCNGG 5 cut(s) 10, 530, 531, 548, 553
SduI GDGCHC 2 cut(s) 528, 553
SetI ASST 9 cut(s) 70, 207, 237, 285, 340, 366, 393, 443, 577
SfcI CTRYAG 1 cut(s) 379
SgrAI CRCCGGYG 1 cut(s) 143
SinI GGWCC 2 cut(s) 202, 479
SmaI CCCGGG 1 cut(s) 531
SmlI CTYRAG 1 cut(s) 498
SmoI CTYRAG 1 cut(s) 498
Sse9I AATT 2 cut(s) 448, 503
SseBI AGGCCT 1 cut(s) 50
SsiI CCGC 8 cut(s) 128, 141, 163, 253, 258, 332, 522, 561
StuI AGGCCT 1 cut(s) 50
StyD4I CCNGG 5 cut(s) 8, 528, 529, 546, 551
StyI CCWWGG 2 cut(s) 292, 356
TaaI ACNGT 3 cut(s) 217, 268, 461
TaiI ACGT 3 cut(s) 237, 340, 577
TasI AATT 2 cut(s) 448, 503
TatI WGTACW 1 cut(s) 375
TauI GCSGC 3 cut(s) 130, 260, 335
TfiI GAWTC 3 cut(s) 96, 137, 298
TscAI CASTG 1 cut(s) 220
TseI GCWGC 2 cut(s) 352, 519
TspDTI ATGAA 1 cut(s) 109
TspMI CCCGGG 1 cut(s) 529
TspRI CASTG 1 cut(s) 220
Tth111I GACNNNGTC 1 cut(s) 215
VpaK11BI GGWCC 2 cut(s) 202, 479
XcmI CCANNNNNNNNNTGG 1 cut(s) 65
XmaI CCCGGG 1 cut(s) 529
ZrmI AGTACT 1 cut(s) 377
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.