Rw6G004000

Belongs to the iron ascorbate-dependent oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0000054
Physical Location & Seq
Reverse (-)
6533377 .. 6534988
1612 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G004000.1

Sequence Viewer

Length: 1104 bp
ATGTACGACAAAATGGCCAATACTGAAGAGCGTCTGCGACAGCTAAAGGCCTTCGACGAATCCAAAGCTGGTGTCAAAGGTCTTGTCGATGATGGAATCACCAAAGTCCCATCCATTTTCATTTGCAAGCCAGAAGATCCCTCAGCCGAGGACATTCCAAGTTTCGGCAATCCAACTGGCCAACACCAATTCAGTATTCCAGTTGTGGACCTTGGTGATGTTGTCGCTGGAAGGCCTGCTAAGGTGATCCAAGATATCCGGCGGGCTGCAGAGAGTGTGGGGTTCTTTTATGTGGTTAACCATGGGATACCCAAGACAGTGTTGGAGGAGATGCTCGAGGCGACGCATGGGTTTCATGAGCTGCCAAGGGAGGTGAAGGCTCAGTACTATACTAGGGATCCCAAGAGGAAGGTCAAATACTTTAGTAGCTATAATTTGTACGAGTCAAAGTTTGCTGCTTGGAGGGACAGCATGTTTTGTGACATGGCTCCGGAGCCCTTAGAACCCCAAGAATTGCCTCTGGTTTGCAGGGATATTACCATGGAGTATTCTAATCAAGTACACAAATTAGGTGTCACTTTGTTTGAATTGCTATCTCAGGCACTTGGACTCAAACCTGACCATCTTATCAGTTTGGATTGCGCAAAAGAGCATCTTATTGCTAGTCACTACTATCCTCCATGTCCTGAGCCTGAGCTCACAATTGGCACGGCCAACCACTCAGATGGCACTTTCATAACAATTCTACTTCAAGATCATATTGGTGGACTTCAGGTTTTGCATCAAAACCAGTGGATTGATGTTATTCCTATGCCTGGAGCTCTAATAGTCAACATTGGAAATTTTATGCAGATAATCTCAAATGATAAGTTCGTAAGCGTTGATCATAGAGTGTTGGCAAAGAAAGAAGGTCCAAGAGTATCTGTGGGATGTTTTTTCCGACCTGCGACGTCGGATAATTCGAGGCTCTACGAGCCAATTAAAGAGTTGACATGCAAAGAAAATCCACCCATTTATCGAACAATTACCACGAAAGAATATTATACGGAGTATTACAAAAACTCTATAAATGAGGTCCCTGTTCTAACATCTTTGAAGTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2OG-FeII_Oxy DIOX_N

Protein Analysis

367

Amino Acids

41.51

Weight (kDa)

5.77

Isoelectric Point (pI)

37.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 66 - 165 4.4e-20 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 217 - 315 4.5e-31 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000054)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03400 AT1G03400 AT1G03410 AT1G03410 AT1G04350 AT1G06620 AT1G06620 AT1G06640 AT1G06640 AT1G06640 AT1G06645 AT1G06650 AT1G06650 AT2G25450 AT2G30830 AT2G30840 AT2G30840 AT2G30840 AT3G61400 AT3G61400 AT5G43440 AT5G43440 AT5G43450 AT5G43450 AT5G59530 AT5G59540 AT5G59540
fragaria_vesca FvH4_2g03190 FvH4_2g03220 FvH4_3g07861 FvH4_3g31880 FvH4_3g31880 FvH4_3g31880 FvH4_4g03241 FvH4_4g03250 FvH4_4g03251 FvH4_4g03260 FvH4_4g03300 FvH4_4g03301 FvH4_4g03301 FvH4_4g03301 FvH4_4g03302 FvH4_4g03303 FvH4_4g03303 FvH4_4g03304 FvH4_4g03305 FvH4_4g03323 FvH4_4g03323 FvH4_5g19290 FvH4_5g19290 FvH4_5g19290 FvH4_5g19291 FvH4_5g19291 FvH4_5g19310 FvH4_5g19310 FvH4_5g19310 FvH4_5g19320 FvH4_5g19321 FvH4_5g19321 FvH4_5g19321 FvH4_7g31470
malus_domestica MD00G1220300.v1.1 MD02G1050800.v1.1 MD02G1053200.v1.1 MD02G1053300.v1.1 MD02G1054900.v1.1 MD03G1032300.v1.1 MD03G1245000.v1.1 MD03G1245300.v1.1 MD05G1014200.v1.1 MD13G1210900.v1.1 MD13G1211000.v1.1 MD13G1211100.v1.1 MD13G1211200.v1.1 MD13G1211800.v1.1 MD13G1211900.v1.1 MD13G1212000.v1.1 MD16G1214100.v1.1 MD16G1214300.v1.1 MD16G1214400.v1.1 MD16G1214600.v1.1 MD16G1215000.v1.1 MD16G1215200.v1.1 MD16G1215300.v1.1 MD16G1215500.v1.1 MD16G1271000.v1.1
prunus_persica Prupe.1G035500_v2.0.a1 Prupe.1G035700_v2.0.a1 Prupe.1G035800_v2.0.a1 Prupe.1G035900_v2.0.a1 Prupe.1G036000_v2.0.a1 Prupe.1G036100_v2.0.a1 Prupe.1G036200_v2.0.a1 Prupe.1G036400_v2.0.a1 Prupe.1G036500_v2.0.a1 Prupe.1G036600_v2.0.a1 Prupe.1G036700_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G191000_v2.0.a1 Prupe.1G191100_v2.0.a1
pyrus_communis pycom13g18340 pycom13g18350 pycom13g18380 pycom16g17990 pycom16g18010 pycom16g18020
rosa_chinensis RchiOBHm_Chr2g0124051 RchiOBHm_Chr4g0391811 RchiOBHm_Chr4g0391931 RchiOBHm_Chr4g0391961 RchiOBHm_Chr4g0391971 RchiOBHm_Chr4g0391981 RchiOBHm_Chr4g0391991 RchiOBHm_Chr4g0392031 RchiOBHm_Chr4g0392051 RchiOBHm_Chr4g0392061 RchiOBHm_Chr4g0392071 RchiOBHm_Chr4g0392081 RchiOBHm_Chr4g0392091 RchiOBHm_Chr4g0392111 RchiOBHm_Chr4g0392121 RchiOBHm_Chr4g0392131 RchiOBHm_Chr4g0392141 RchiOBHm_Chr4g0392151 RchiOBHm_Chr4g0392211 RchiOBHm_Chr4g0392251 RchiOBHm_Chr4g0392261 RchiOBHm_Chr4g0392301 RchiOBHm_Chr4g0392311 RchiOBHm_Chr4g0392341 RchiOBHm_Chr4g0409221 RchiOBHm_Chr4g0410991 RchiOBHm_Chr4g0429131 RchiOBHm_Chr4g0437051 RchiOBHm_Chr5g0038681 RchiOBHm_Chr5g0047071 RchiOBHm_Chr5g0058651 RchiOBHm_Chr6g0248121 RchiOBHm_Chr6g0248141 RchiOBHm_Chr6g0248291 RchiOBHm_Chr6g0248341 RchiOBHm_Chr6g0248351
rosa_laevigata RLG00000006473 RLG00000006475 RLG00000006667 RLG00000007095 RLG00000009819 RLG00000009820 RLG00000009821 RLG00000009822 RLG00000009825 RLG00000009826 RLG00000009830 RLG00000009831 RLG00000009832 RLG00000009833 RLG00000009834 RLG00000009835 RLG00000009837 RLG00000009838 RLG00000009839 RLG00000009841 RLG00000009842 RLG00000009844 RLG00000009845 RLG00000009846 RLG00000009847 RLG00000009848 RLG00000009849 RLG00000015160 RLG00000015161 RLG00000017791 RLG00000018779 RLG00000034461 RLG00000035237
rosa_multiflora Rmu_co8253791.1_g000001 Rmu_co8348827.1_g000001 Rmu_co8400489.1_g000001 Rmu_sc0000383.1_g000003 Rmu_sc0000383.1_g000005 Rmu_sc0000383.1_g000026 Rmu_sc0000846.1_g000012 Rmu_sc0001231.1_g000013 Rmu_sc0001231.1_g000026 Rmu_sc0001231.1_g000028 Rmu_sc0001800.1_g000027 Rmu_sc0003436.1_g000022 Rmu_sc0004104.1_g000004 Rmu_sc0004295.1_g000021 Rmu_sc0004295.1_g000031 Rmu_sc0004928.1_g000002 Rmu_sc0004928.1_g000008 Rmu_sc0004928.1_g000011 Rmu_sc0004928.1_g000027 Rmu_sc0004977.1_g000007 Rmu_sc0005018.1_g000002 Rmu_sc0005091.1_g000026 Rmu_sc0005091.1_g000032 Rmu_sc0005091.1_g000033 Rmu_sc0005817.1_g000003 Rmu_sc0005817.1_g000008 Rmu_sc0012482.1_g000002 Rmu_sc0014210.1_g000001 Rmu_sc0016150.1_g000001 Rmu_sc0029701.1_g000002 Rmu_sc0036585.1_g000001 Rmu_sc0037489.1_g000002
rosa_roxburghii Rroxscaffold_1G00021790 Rroxscaffold_1G00021800 Rroxscaffold_1G00034360 Rroxscaffold_2G00120130 Rroxscaffold_5G00337210 Rroxscaffold_5G00337220 Rroxscaffold_5G00337230 Rroxscaffold_5G00337250 Rroxscaffold_5G00337260 Rroxscaffold_5G00337270 Rroxscaffold_5G00337300 Rroxscaffold_5G00337310 Rroxscaffold_5G00337320 Rroxscaffold_5G00337330 Rroxscaffold_5G00337350 Rroxscaffold_5G00337370 Rroxscaffold_5G00337390 Rroxscaffold_5G00337400 Rroxscaffold_5G00337420 Rroxscaffold_5G00337430 Rroxscaffold_5G00337450 Rroxscaffold_5G00337470 Rroxscaffold_5G00337480 Rroxscaffold_5G00337520 Rroxscaffold_5G00378130 Rroxscaffold_6G00397800 Rroxscaffold_7G00213320 Rroxscaffold_7G00213390 Rroxscaffold_7G00213420 Rroxscaffold_7G00213470
rosa_rugosa Rorug02G0070100 Rorug02G0070100 Rorug02G0070100 Rorug02G0128600 Rorug02G0128700 Rorug02G0128800 Rorug02G0128900 Rorug02G0248400 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337100 Rorug03G0337200 Rorug03G0337300 Rorug03G0337600 Rorug03G0337700 Rorug03G0337800 Rorug03G0337900 Rorug03G0337900 Rorug03G0338000 Rorug03G0338100 Rorug03G0338200 Rorug04G0233200.1 Rorug04G0297900 Rorug05G0233700 Rorug05G0316700 Rorug05G0530800 Rorug05G0530900
rosa_samantha Rh2AG307400 Rh2BG316500 Rh2DG331200 Rh4AG039300 Rh4AG039400 Rh4AG039600 Rh4AG039700 Rh4AG039900 Rh4AG040000 Rh4AG040100 Rh4AG040300 Rh4AG040500 Rh4AG040700 Rh4AG041000 Rh4AG041100 Rh4AG041600 Rh4AG041800 Rh4AG041900 Rh4AG352400 Rh4BG033200 Rh4BG034100 Rh4BG034300 Rh4BG034700 Rh4BG034800 Rh4BG035200 Rh4BG035400 Rh4BG036000 Rh4BG036200 Rh4BG036300 Rh4BG036500 Rh4BG036800 Rh4BG361700 Rh4CG042000 Rh4CG042200 Rh4CG042300 Rh4CG042500 Rh4CG042600 Rh4CG042800 Rh4CG043200 Rh4CG043400 Rh4CG043500 Rh4CG043700 Rh4CG043800 Rh4CG044200 Rh4CG044500 Rh4CG044700 Rh4CG177000 Rh4CG310600 Rh4CG376000 Rh4DG036300 Rh4DG036900 Rh4DG037000 Rh4DG037100 Rh4DG037200 Rh4DG037300 Rh4DG037500 Rh4DG037700 Rh4DG037800 Rh4DG037900 Rh4DG038000 Rh4DG038200 Rh4DG038500 Rh4DG038700 Rh4DG038900 Rh4DG159600 Rh5CG347900 Rh5DG409900 Rh6AG045300 Rh6AG045800 Rh6AG046000 Rh6AG046100 Rh6BG040600 Rh6BG040700 Rh6BG042200 Rh6BG042700 Rh6BG042800 Rh6DG035900 Rh6DG036100 Rh6DG036200
rosa_wichuraiana Rw0G010420 Rw2G024780 Rw4G003020 Rw4G003070 Rw4G003080 Rw4G003090 Rw4G003100 Rw4G003130 Rw4G003140 Rw4G003150 Rw4G003180 Rw4G003190 Rw4G003200 Rw4G003210 Rw4G003220 Rw4G003240 Rw4G003270 Rw4G025050 Rw4G030850 Rw6G003930 Rw6G004000 Rw6G004030 Rw6G004040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 953
Acc16I TGCGCA 1 cut(s) 643
Acc36I ACCTGC 1 cut(s) 952
AccIII TCCGGA 1 cut(s) 490
AciI CCGC 1 cut(s) 262
AclWI GGATC 4 cut(s) 131, 241, 392, 405
AcoI YGGCCR 3 cut(s) 15, 178, 711
AcsI RAATTY 1 cut(s) 841
AcuI CTGAAG 2 cut(s) 45, 755
AcyI GRCGYC 1 cut(s) 950
AfaI GTAC 4 cut(s) 5, 386, 440, 561
AfiI CCNNNNNNNGG 2 cut(s) 164, 815
AgsI TTSAA 3 cut(s) 587, 752, 1096
AjnI CCWGG 1 cut(s) 814
AjuI GAANNNNNNNTTGG 2 cut(s) 180, 212
AluBI AGCT 6 cut(s) 43, 68, 361, 429, 697, 821
AluI AGCT 6 cut(s) 43, 68, 361, 429, 697, 821
Alw21I GWGCWC 2 cut(s) 699, 823
AlwI GGATC 4 cut(s) 131, 241, 392, 405
Ama87I CYCGRG 1 cut(s) 335
Aor13HI TCCGGA 1 cut(s) 490
AoxI GGCC 5 cut(s) 15, 48, 178, 233, 711
ApeKI GCWGC 3 cut(s) 266, 361, 455
ApoI RAATTY 1 cut(s) 841
ArsI GACNNNNNNTTYG 6 cut(s) 57, 69, 89, 101, 558, 590
AspLEI GCGC 1 cut(s) 644
AspS9I GGNCC 3 cut(s) 208, 911, 1075
AsuHPI GGTGA 4 cut(s) 91, 227, 256, 385
AvaI CYCGRG 1 cut(s) 335
AvaII GGWCC 3 cut(s) 208, 911, 1075
BalI TGGCCA 2 cut(s) 17, 180
BamHI GGATCC 1 cut(s) 397
BanII GRGCYC 3 cut(s) 498, 699, 823
BarI GAAGNNNNNNTAC 4 cut(s) 368, 400, 401, 433
Bbv12I GWGCWC 2 cut(s) 699, 823
BbvCI CCTCAGC 1 cut(s) 142
BbvI GCAGC 3 cut(s) 253, 348, 442
BccI CCATC 4 cut(s) 86, 118, 630, 719
BceAI ACGGC 1 cut(s) 726
BciT130I CCWGG 1 cut(s) 816
BciVI GTATCC 1 cut(s) 300
BclI TGATCA 1 cut(s) 883
BfaI CTAG 2 cut(s) 393, 663
BfmI CTRYAG 1 cut(s) 267
BfuAI ACCTGC 1 cut(s) 952
BfuI GTATCC 1 cut(s) 300
BisI GCNGC 3 cut(s) 267, 362, 456
BlsI GCNGC 3 cut(s) 268, 363, 457
BmcAI AGTACT 1 cut(s) 386
Bme1390I CCNGG 1 cut(s) 816
Bme18I GGWCC 3 cut(s) 208, 911, 1075
BmeT110I CYCGRG 1 cut(s) 335
BmgT120I GGNCC 3 cut(s) 208, 911, 1075
BmiI GGNNCC 4 cut(s) 399, 489, 495, 1077
BmrFI CCNGG 1 cut(s) 816
BmsI GCATC 3 cut(s) 321, 661, 790
BpmI CTGGAG 1 cut(s) 837
Bpu10I CCTNAGC 4 cut(s) 142, 240, 687, 693
BsaHI GRCGYC 1 cut(s) 950
BsaJI CCNNGG 5 cut(s) 147, 211, 301, 365, 540
BsaWI WCCGGW 1 cut(s) 490
Bsc4I CCNNNNNNNGG 2 cut(s) 164, 815
Bse1I ACTGG 3 cut(s) 181, 200, 790
BseAI TCCGGA 1 cut(s) 490
BseBI CCWGG 1 cut(s) 816
BseDI CCNNGG 5 cut(s) 147, 211, 301, 365, 540
BseGI GGATG 2 cut(s) 110, 935
BseLI CCNNNNNNNGG 2 cut(s) 164, 815
BseMII CTCAG 6 cut(s) 156, 395, 611, 678, 684, 735
BseNI ACTGG 3 cut(s) 181, 200, 790
BseRI GAGGAG 1 cut(s) 341
BseXI GCAGC 3 cut(s) 253, 348, 442
BshFI GGCC 5 cut(s) 17, 50, 180, 235, 713
BsiHKAI GWGCWC 2 cut(s) 699, 823
BsiHKCI CYCGRG 1 cut(s) 335
BsiSI CCGG 2 cut(s) 259, 491
BslFI GGGAC 3 cut(s) 92, 479, 1061
BslI CCNNNNNNNGG 2 cut(s) 164, 815
BsmFI GGGAC 3 cut(s) 92, 479, 1061
BsnI GGCC 5 cut(s) 17, 50, 180, 235, 713
BsoBI CYCGRG 1 cut(s) 335
Bsp1286I GDGCHC 3 cut(s) 498, 699, 823
Bsp13I TCCGGA 1 cut(s) 490
Bsp143I GATC 5 cut(s) 136, 246, 397, 754, 883
Bsp19I CCATGG 2 cut(s) 301, 540
BspACI CCGC 1 cut(s) 262
BspANI GGCC 5 cut(s) 17, 50, 180, 235, 713
BspCNI CTCAG 6 cut(s) 155, 394, 610, 679, 685, 734
BspEI TCCGGA 1 cut(s) 490
BspHI TCATGA 1 cut(s) 355
BspLI GGNNCC 4 cut(s) 399, 489, 495, 1077
BspMAI CTGCAG 1 cut(s) 271
BspMI ACCTGC 1 cut(s) 952
BspPI GGATC 4 cut(s) 131, 241, 392, 405
BspQI GCTCTTC 1 cut(s) 21
BsrI ACTGG 3 cut(s) 181, 200, 790
BssECI CCNNGG 5 cut(s) 147, 211, 301, 365, 540
BssMI GATC 5 cut(s) 136, 246, 397, 754, 883
BssNI GRCGYC 1 cut(s) 950
BssT1I CCWWGG 4 cut(s) 211, 301, 365, 540
Bst2UI CCWGG 1 cut(s) 816
Bst4CI ACNGT 1 cut(s) 319
Bst6I CTCTTC 1 cut(s) 21
BstACI GRCGYC 1 cut(s) 950
BstC8I GCNNGC 3 cut(s) 128, 237, 264
BstDEI CTNAG 8 cut(s) 142, 240, 381, 499, 597, 687, 693, 721
BstDSI CCRYGG 2 cut(s) 301, 540
BstF5I GGATG 2 cut(s) 110, 935
BstHHI GCGC 1 cut(s) 644
BstKTI GATC 5 cut(s) 139, 249, 400, 757, 886
BstMBI GATC 5 cut(s) 136, 246, 397, 754, 883
BstMWI GCNNNNNNNGC 1 cut(s) 973
BstNI CCWGG 1 cut(s) 816
BstNSI RCATGY 2 cut(s) 475, 996
BstSCI CCNGG 1 cut(s) 814
BstSFI CTRYAG 1 cut(s) 267
BstV1I GCAGC 3 cut(s) 253, 348, 442
BstX2I RGATCY 2 cut(s) 136, 397
BstXI CCANNNNNNTGG 1 cut(s) 725
BstYI RGATCY 2 cut(s) 136, 397
BsuI GTATCC 1 cut(s) 300
BsuRI GGCC 5 cut(s) 17, 50, 180, 235, 713
BtgI CCRYGG 2 cut(s) 301, 540
BtsCI GGATG 2 cut(s) 110, 935
BtsIMutI CAGTG 2 cut(s) 324, 797
BveI ACCTGC 1 cut(s) 952
Cac8I GCNNGC 3 cut(s) 128, 237, 264
CciI TCATGA 1 cut(s) 355
CfoI GCGC 1 cut(s) 644
Cfr13I GGNCC 3 cut(s) 208, 911, 1075
CseI GACGC 2 cut(s) 20, 352
Csp6I GTAC 4 cut(s) 4, 385, 439, 560
CspCI CAANNNNNGTGG 2 cut(s) 773, 808
CviAII CATG 8 cut(s) 302, 347, 356, 472, 484, 541, 681, 993
CviQI GTAC 4 cut(s) 4, 385, 439, 560
DdeI CTNAG 8 cut(s) 142, 240, 381, 499, 597, 687, 693, 721
DpnI GATC 5 cut(s) 138, 248, 399, 756, 885
DpnII GATC 5 cut(s) 136, 246, 397, 754, 883
EaeI YGGCCR 3 cut(s) 15, 178, 711
Eam1104I CTCTTC 1 cut(s) 21
EarI CTCTTC 1 cut(s) 21
Ecl136II GAGCTC 2 cut(s) 697, 821
Eco130I CCWWGG 4 cut(s) 211, 301, 365, 540
Eco147I AGGCCT 2 cut(s) 50, 235
Eco24I GRGCYC 3 cut(s) 498, 699, 823
Eco32I GATATC 1 cut(s) 256
Eco47I GGWCC 3 cut(s) 208, 911, 1075
Eco53kI GAGCTC 2 cut(s) 697, 821
Eco57I CTGAAG 2 cut(s) 45, 755
Eco88I CYCGRG 1 cut(s) 335
EcoICRI GAGCTC 2 cut(s) 697, 821
EcoO109I RGGNCCY 1 cut(s) 1075
EcoRII CCWGG 1 cut(s) 814
EcoRV GATATC 1 cut(s) 256
EcoT14I CCWWGG 4 cut(s) 211, 301, 365, 540
EcoT38I GRGCYC 3 cut(s) 498, 699, 823
ErhI CCWWGG 4 cut(s) 211, 301, 365, 540
FaeI CATG 8 cut(s) 305, 350, 359, 475, 487, 544, 684, 996
FalI AAGNNNNNCTT 2 cut(s) 639, 671
FaqI GGGAC 3 cut(s) 92, 479, 1061
FatI CATG 8 cut(s) 301, 346, 355, 471, 483, 540, 680, 992
FauI CCCGC 1 cut(s) 255
FbaI TGATCA 1 cut(s) 883
Fnu4HI GCNGC 3 cut(s) 267, 362, 456
FokI GGATG 2 cut(s) 97, 942
FriOI GRGCYC 3 cut(s) 498, 699, 823
Fsp4HI GCNGC 3 cut(s) 267, 362, 456
FspBI CTAG 2 cut(s) 393, 663
FspI TGCGCA 1 cut(s) 643
GlaI GCGC 1 cut(s) 643
GluI GCNGC 3 cut(s) 267, 362, 456
GsuI CTGGAG 1 cut(s) 837
HaeIII GGCC 5 cut(s) 17, 50, 180, 235, 713
HapII CCGG 2 cut(s) 259, 491
HgaI GACGC 2 cut(s) 20, 352
HhaI GCGC 1 cut(s) 644
Hin1I GRCGYC 1 cut(s) 950
Hin1II CATG 8 cut(s) 305, 350, 359, 475, 487, 544, 684, 996
Hin6I GCGC 1 cut(s) 642
HinP1I GCGC 1 cut(s) 642
HincII GTYRAC 3 cut(s) 298, 832, 990
HindII GTYRAC 3 cut(s) 298, 832, 990
HinfI GANTC 4 cut(s) 59, 96, 443, 609
HpaI GTTAAC 1 cut(s) 298
HpaII CCGG 2 cut(s) 259, 491
HphI GGTGA 4 cut(s) 91, 227, 256, 385
Hpy166II GTNNAC 6 cut(s) 208, 298, 562, 767, 832, 990
Hpy188I TCNGA 3 cut(s) 724, 941, 955
Hpy188III TCNNGA 4 cut(s) 356, 491, 686, 752
Hpy8I GTNNAC 6 cut(s) 208, 298, 562, 767, 832, 990
Hpy99I CGWCG 4 cut(s) 59, 346, 952, 955
HpyAV CCTTC 5 cut(s) 61, 225, 370, 403, 902
HpyCH4III ACNGT 1 cut(s) 319
HpyCH4IV ACGT 1 cut(s) 950
HpyCH4V TGCA 6 cut(s) 126, 269, 528, 781, 850, 996
HpyF10VI GCNNNNNNNGC 1 cut(s) 973
HpyF3I CTNAG 8 cut(s) 142, 240, 381, 499, 597, 687, 693, 721
HpySE526I ACGT 1 cut(s) 950
Hsp92I GRCGYC 1 cut(s) 950
Hsp92II CATG 8 cut(s) 305, 350, 359, 475, 487, 544, 684, 996
HspAI GCGC 1 cut(s) 642
Kpn2I TCCGGA 1 cut(s) 490
Ksp22I TGATCA 1 cut(s) 883
KspAI GTTAAC 1 cut(s) 298
Kzo9I GATC 5 cut(s) 136, 246, 397, 754, 883
LguI GCTCTTC 1 cut(s) 21
LmnI GCTCC 3 cut(s) 493, 493, 818
Lsp1109I GCAGC 3 cut(s) 253, 348, 442
LweI GCATC 3 cut(s) 321, 661, 790
MaeI CTAG 2 cut(s) 393, 663
MaeII ACGT 1 cut(s) 950
MaeIII GTNAC 3 cut(s) 479, 574, 665
MalI GATC 5 cut(s) 138, 248, 399, 756, 885
MboI GATC 5 cut(s) 136, 246, 397, 754, 883
MboII GAAGA 2 cut(s) 38, 146
MfeI CAATTG 1 cut(s) 702
MflI RGATCY 2 cut(s) 136, 397
MhlI GDGCHC 3 cut(s) 498, 699, 823
MlsI TGGCCA 2 cut(s) 17, 180
MluNI TGGCCA 2 cut(s) 17, 180
MlyI GAGTC 2 cut(s) 452, 603
MmeI TCCRAC 4 cut(s) 197, 303, 933, 964
Mox20I TGGCCA 2 cut(s) 17, 180
MroI TCCGGA 1 cut(s) 490
MscI TGGCCA 2 cut(s) 17, 180
MseI TTAA 2 cut(s) 297, 981
MslI CAYNNNNRTG 2 cut(s) 723, 762
Msp20I TGGCCA 2 cut(s) 17, 180
MspI CCGG 2 cut(s) 259, 491
MspR9I CCNGG 1 cut(s) 816
MunI CAATTG 1 cut(s) 702
MvaI CCWGG 1 cut(s) 816
MwoI GCNNNNNNNGC 1 cut(s) 973
NcoI CCATGG 2 cut(s) 301, 540
NdeII GATC 5 cut(s) 136, 246, 397, 754, 883
NlaIII CATG 8 cut(s) 305, 350, 359, 475, 487, 544, 684, 996
NlaIV GGNNCC 4 cut(s) 399, 489, 495, 1077
NmeAIII GCCGAG 1 cut(s) 172
NmuCI GTSAC 3 cut(s) 479, 574, 665
NsbI TGCGCA 1 cut(s) 643
NspI RCATGY 2 cut(s) 475, 996
PaeR7I CTCGAG 1 cut(s) 335
PagI TCATGA 1 cut(s) 355
PceI AGGCCT 2 cut(s) 50, 235
PciSI GCTCTTC 1 cut(s) 21
PcsI WCGNNNNNNNCGW 1 cut(s) 959
PfeI GAWTC 2 cut(s) 59, 96
PkrI GCNGC 3 cut(s) 268, 363, 457
PleI GAGTC 2 cut(s) 451, 603
PpsI GAGTC 2 cut(s) 451, 603
PpuMI RGGWCCY 1 cut(s) 1075
Psp124BI GAGCTC 2 cut(s) 699, 823
Psp5II RGGWCCY 1 cut(s) 1075
Psp6I CCWGG 1 cut(s) 814
PspGI CCWGG 1 cut(s) 814
PspN4I GGNNCC 4 cut(s) 399, 489, 495, 1077
PspPI GGNCC 3 cut(s) 208, 911, 1075
PspPPI RGGWCCY 1 cut(s) 1075
PspXI VCTCGAGB 1 cut(s) 335
PstI CTGCAG 1 cut(s) 271
PsuI RGATCY 2 cut(s) 136, 397
RsaI GTAC 4 cut(s) 5, 386, 440, 561
RsaNI GTAC 4 cut(s) 4, 385, 439, 560
RseI CAYNNNNRTG 2 cut(s) 723, 762
SacI GAGCTC 2 cut(s) 699, 823
SapI GCTCTTC 1 cut(s) 21
SaqAI TTAA 2 cut(s) 297, 981
SatI GCNGC 3 cut(s) 267, 362, 456
Sau3AI GATC 5 cut(s) 136, 246, 397, 754, 883
Sau96I GGNCC 3 cut(s) 208, 911, 1075
ScaI AGTACT 1 cut(s) 386
SchI GAGTC 2 cut(s) 452, 603
ScrFI CCNGG 1 cut(s) 816
SduI GDGCHC 3 cut(s) 498, 699, 823
SfaNI GCATC 3 cut(s) 321, 661, 790
SfcI CTRYAG 1 cut(s) 267
Sfr274I CTCGAG 1 cut(s) 335
SinI GGWCC 3 cut(s) 208, 911, 1075
SlaI CTCGAG 1 cut(s) 335
SmiMI CAYNNNNRTG 2 cut(s) 723, 762
SmlI CTYRAG 1 cut(s) 335
SmoI CTYRAG 1 cut(s) 335
SseBI AGGCCT 2 cut(s) 50, 235
SsiI CCGC 1 cut(s) 262
SspI AATATT 1 cut(s) 1040
SspMI CTAG 2 cut(s) 393, 663
SstI GAGCTC 2 cut(s) 699, 823
StuI AGGCCT 2 cut(s) 50, 235
StyD4I CCNGG 1 cut(s) 814
StyI CCWWGG 4 cut(s) 211, 301, 365, 540
TaaI ACNGT 1 cut(s) 319
TaiI ACGT 1 cut(s) 953
TaqI TCGA 5 cut(s) 54, 87, 336, 962, 1018
TatI WGTACW 2 cut(s) 384, 559
TfiI GAWTC 2 cut(s) 59, 96
Tru1I TTAA 2 cut(s) 297, 981
Tru9I TTAA 2 cut(s) 297, 981
TscAI CASTG 2 cut(s) 324, 797
TseFI GTSAC 3 cut(s) 479, 574, 665
TseI GCWGC 3 cut(s) 266, 361, 455
Tsp45I GTSAC 3 cut(s) 479, 574, 665
TspDTI ATGAA 3 cut(s) 109, 344, 724
TspGWI ACGGA 1 cut(s) 1061
TspRI CASTG 2 cut(s) 324, 797
VpaK11BI GGWCC 3 cut(s) 208, 911, 1075
XapI RAATTY 1 cut(s) 841
XceI RCATGY 2 cut(s) 475, 996
XcmI CCANNNNNNNNNTGG 1 cut(s) 319
XhoI CTCGAG 1 cut(s) 335
XspI CTAG 2 cut(s) 393, 663
ZraI GACGTC 1 cut(s) 951
ZrmI AGTACT 1 cut(s) 386
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.