Rh4DG038500

Belongs to the iron ascorbate-dependent oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
OG0000054
Physical Location & Seq
Forward (+)
6268589 .. 6270255
1667 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG038500.1

Sequence Viewer

Length: 657 bp
ATGGTCACCGGGAACTCAAGCGACCAAGAGCGTCTGCAGCAACTTATGGCCTTCGATGAATCCAAAGCTGGTGTCAAAGGGATCGTCGATGGCGGAATCACCAAAGTCCCACCAATTTTCGTCCGTCCCAAGGAAGATCCCTCCGTCGGCGGCGACCAGAAGATTTCAGGCCATTTCAGTATCCCAGTGGTGGATCTCTCTGAAAATAACGGCAGGCGTGCTGAGGTGATCGACCAAGTCCGGAGGGCCGCAGAGAGCTATGGGTTCTTCCAGGTGGTGAACCATGGAGTGCCTGAGAGAGTGATGGAGGAGATCATGGAGGCGACTCGTGCGTTTCACGAGCTGCCGAGGGAGGTGAAGGCTGAGTACTACGGTAGAGAACTGGTGAGGAAGGTCAAGTACTTCACTAGCAATAACATGTATGAGTTGATGTATGGTGATTGGAGAGACAGTATGCAGATTAATAGGAGTGTTGAGGACTTTGATCCTCAAGAAATTCCTCCCGTTCTCAGAGATATAACTATAAGGTACTCGGAGCATGCTCAGAAATTAGGTGTCACTTTGTTTGAATTGCTATCTGAAGCGCTTGGGCTCAAATCGGATCATCTCATAAACTTGGATTGTGCAAAGGGGCATATGATTCTTAATCACTATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2OG-FeII_Oxy DIOX_N

Protein Analysis

218

Amino Acids

24.83

Weight (kDa)

5.42

Isoelectric Point (pI)

38.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 61 - 163 4.5e-23 non-haem dioxygenase in morphine synthesis N-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000054)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03400 AT1G03400 AT1G03410 AT1G03410 AT1G04350 AT1G06620 AT1G06620 AT1G06640 AT1G06640 AT1G06640 AT1G06645 AT1G06650 AT1G06650 AT2G25450 AT2G30830 AT2G30840 AT2G30840 AT2G30840 AT3G61400 AT3G61400 AT5G43440 AT5G43440 AT5G43450 AT5G43450 AT5G59530 AT5G59540 AT5G59540
fragaria_vesca FvH4_2g03190 FvH4_2g03220 FvH4_3g07861 FvH4_3g31880 FvH4_3g31880 FvH4_3g31880 FvH4_4g03241 FvH4_4g03250 FvH4_4g03251 FvH4_4g03260 FvH4_4g03300 FvH4_4g03301 FvH4_4g03301 FvH4_4g03301 FvH4_4g03302 FvH4_4g03303 FvH4_4g03303 FvH4_4g03304 FvH4_4g03305 FvH4_4g03323 FvH4_4g03323 FvH4_5g19290 FvH4_5g19290 FvH4_5g19290 FvH4_5g19291 FvH4_5g19291 FvH4_5g19310 FvH4_5g19310 FvH4_5g19310 FvH4_5g19320 FvH4_5g19321 FvH4_5g19321 FvH4_5g19321 FvH4_7g31470
malus_domestica MD00G1220300.v1.1 MD02G1050800.v1.1 MD02G1053200.v1.1 MD02G1053300.v1.1 MD02G1054900.v1.1 MD03G1032300.v1.1 MD03G1245000.v1.1 MD03G1245300.v1.1 MD05G1014200.v1.1 MD13G1210900.v1.1 MD13G1211000.v1.1 MD13G1211100.v1.1 MD13G1211200.v1.1 MD13G1211800.v1.1 MD13G1211900.v1.1 MD13G1212000.v1.1 MD16G1214100.v1.1 MD16G1214300.v1.1 MD16G1214400.v1.1 MD16G1214600.v1.1 MD16G1215000.v1.1 MD16G1215200.v1.1 MD16G1215300.v1.1 MD16G1215500.v1.1 MD16G1271000.v1.1
prunus_persica Prupe.1G035500_v2.0.a1 Prupe.1G035700_v2.0.a1 Prupe.1G035800_v2.0.a1 Prupe.1G035900_v2.0.a1 Prupe.1G036000_v2.0.a1 Prupe.1G036100_v2.0.a1 Prupe.1G036200_v2.0.a1 Prupe.1G036400_v2.0.a1 Prupe.1G036500_v2.0.a1 Prupe.1G036600_v2.0.a1 Prupe.1G036700_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G191000_v2.0.a1 Prupe.1G191100_v2.0.a1
pyrus_communis pycom13g18340 pycom13g18350 pycom13g18380 pycom16g17990 pycom16g18010 pycom16g18020
rosa_chinensis RchiOBHm_Chr2g0124051 RchiOBHm_Chr4g0391811 RchiOBHm_Chr4g0391931 RchiOBHm_Chr4g0391961 RchiOBHm_Chr4g0391971 RchiOBHm_Chr4g0391981 RchiOBHm_Chr4g0391991 RchiOBHm_Chr4g0392031 RchiOBHm_Chr4g0392051 RchiOBHm_Chr4g0392061 RchiOBHm_Chr4g0392071 RchiOBHm_Chr4g0392081 RchiOBHm_Chr4g0392091 RchiOBHm_Chr4g0392111 RchiOBHm_Chr4g0392121 RchiOBHm_Chr4g0392131 RchiOBHm_Chr4g0392141 RchiOBHm_Chr4g0392151 RchiOBHm_Chr4g0392211 RchiOBHm_Chr4g0392251 RchiOBHm_Chr4g0392261 RchiOBHm_Chr4g0392301 RchiOBHm_Chr4g0392311 RchiOBHm_Chr4g0392341 RchiOBHm_Chr4g0409221 RchiOBHm_Chr4g0410991 RchiOBHm_Chr4g0429131 RchiOBHm_Chr4g0437051 RchiOBHm_Chr5g0038681 RchiOBHm_Chr5g0047071 RchiOBHm_Chr5g0058651 RchiOBHm_Chr6g0248121 RchiOBHm_Chr6g0248141 RchiOBHm_Chr6g0248291 RchiOBHm_Chr6g0248341 RchiOBHm_Chr6g0248351
rosa_laevigata RLG00000006473 RLG00000006475 RLG00000006667 RLG00000007095 RLG00000009819 RLG00000009820 RLG00000009821 RLG00000009822 RLG00000009825 RLG00000009826 RLG00000009830 RLG00000009831 RLG00000009832 RLG00000009833 RLG00000009834 RLG00000009835 RLG00000009837 RLG00000009838 RLG00000009839 RLG00000009841 RLG00000009842 RLG00000009844 RLG00000009845 RLG00000009846 RLG00000009847 RLG00000009848 RLG00000009849 RLG00000015160 RLG00000015161 RLG00000017791 RLG00000018779 RLG00000034461 RLG00000035237
rosa_multiflora Rmu_co8253791.1_g000001 Rmu_co8348827.1_g000001 Rmu_co8400489.1_g000001 Rmu_sc0000383.1_g000003 Rmu_sc0000383.1_g000005 Rmu_sc0000383.1_g000026 Rmu_sc0000846.1_g000012 Rmu_sc0001231.1_g000013 Rmu_sc0001231.1_g000026 Rmu_sc0001231.1_g000028 Rmu_sc0001800.1_g000027 Rmu_sc0003436.1_g000022 Rmu_sc0004104.1_g000004 Rmu_sc0004295.1_g000021 Rmu_sc0004295.1_g000031 Rmu_sc0004928.1_g000002 Rmu_sc0004928.1_g000008 Rmu_sc0004928.1_g000011 Rmu_sc0004928.1_g000027 Rmu_sc0004977.1_g000007 Rmu_sc0005018.1_g000002 Rmu_sc0005091.1_g000026 Rmu_sc0005091.1_g000032 Rmu_sc0005091.1_g000033 Rmu_sc0005817.1_g000003 Rmu_sc0005817.1_g000008 Rmu_sc0012482.1_g000002 Rmu_sc0014210.1_g000001 Rmu_sc0016150.1_g000001 Rmu_sc0029701.1_g000002 Rmu_sc0036585.1_g000001 Rmu_sc0037489.1_g000002
rosa_roxburghii Rroxscaffold_1G00021790 Rroxscaffold_1G00021800 Rroxscaffold_1G00034360 Rroxscaffold_2G00120130 Rroxscaffold_5G00337210 Rroxscaffold_5G00337220 Rroxscaffold_5G00337230 Rroxscaffold_5G00337250 Rroxscaffold_5G00337260 Rroxscaffold_5G00337270 Rroxscaffold_5G00337300 Rroxscaffold_5G00337310 Rroxscaffold_5G00337320 Rroxscaffold_5G00337330 Rroxscaffold_5G00337350 Rroxscaffold_5G00337370 Rroxscaffold_5G00337390 Rroxscaffold_5G00337400 Rroxscaffold_5G00337420 Rroxscaffold_5G00337430 Rroxscaffold_5G00337450 Rroxscaffold_5G00337470 Rroxscaffold_5G00337480 Rroxscaffold_5G00337520 Rroxscaffold_5G00378130 Rroxscaffold_6G00397800 Rroxscaffold_7G00213320 Rroxscaffold_7G00213390 Rroxscaffold_7G00213420 Rroxscaffold_7G00213470
rosa_rugosa Rorug02G0070100 Rorug02G0070100 Rorug02G0070100 Rorug02G0128600 Rorug02G0128700 Rorug02G0128800 Rorug02G0128900 Rorug02G0248400 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337100 Rorug03G0337200 Rorug03G0337300 Rorug03G0337600 Rorug03G0337700 Rorug03G0337800 Rorug03G0337900 Rorug03G0337900 Rorug03G0338000 Rorug03G0338100 Rorug03G0338200 Rorug04G0233200.1 Rorug04G0297900 Rorug05G0233700 Rorug05G0316700 Rorug05G0530800 Rorug05G0530900
rosa_samantha Rh2AG307400 Rh2BG316500 Rh2DG331200 Rh4AG039300 Rh4AG039400 Rh4AG039600 Rh4AG039700 Rh4AG039900 Rh4AG040000 Rh4AG040100 Rh4AG040300 Rh4AG040500 Rh4AG040700 Rh4AG041000 Rh4AG041100 Rh4AG041600 Rh4AG041800 Rh4AG041900 Rh4AG352400 Rh4BG033200 Rh4BG034100 Rh4BG034300 Rh4BG034700 Rh4BG034800 Rh4BG035200 Rh4BG035400 Rh4BG036000 Rh4BG036200 Rh4BG036300 Rh4BG036500 Rh4BG036800 Rh4BG361700 Rh4CG042000 Rh4CG042200 Rh4CG042300 Rh4CG042500 Rh4CG042600 Rh4CG042800 Rh4CG043200 Rh4CG043400 Rh4CG043500 Rh4CG043700 Rh4CG043800 Rh4CG044200 Rh4CG044500 Rh4CG044700 Rh4CG177000 Rh4CG310600 Rh4CG376000 Rh4DG036300 Rh4DG036900 Rh4DG037000 Rh4DG037100 Rh4DG037200 Rh4DG037300 Rh4DG037500 Rh4DG037700 Rh4DG037800 Rh4DG037900 Rh4DG038000 Rh4DG038200 Rh4DG038500 Rh4DG038700 Rh4DG038900 Rh4DG159600 Rh5CG347900 Rh5DG409900 Rh6AG045300 Rh6AG045800 Rh6AG046000 Rh6AG046100 Rh6BG040600 Rh6BG040700 Rh6BG042200 Rh6BG042700 Rh6BG042800 Rh6DG035900 Rh6DG036100 Rh6DG036200
rosa_wichuraiana Rw0G010420 Rw2G024780 Rw4G003020 Rw4G003070 Rw4G003080 Rw4G003090 Rw4G003100 Rw4G003130 Rw4G003140 Rw4G003150 Rw4G003180 Rw4G003190 Rw4G003200 Rw4G003210 Rw4G003220 Rw4G003240 Rw4G003270 Rw4G025050 Rw4G030850 Rw6G003930 Rw6G004000 Rw6G004030 Rw6G004040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 240
AciI CCGC 3 cut(s) 93, 150, 249
AclWI GGATC 5 cut(s) 89, 131, 201, 479, 609
AcsI RAATTY 1 cut(s) 495
AcuI CTGAAG 1 cut(s) 600
AfaI GTAC 3 cut(s) 368, 401, 530
AfeI AGCGCT 1 cut(s) 585
AfiI CCNNNNNNNGG 3 cut(s) 130, 146, 190
AflIII ACRYGT 1 cut(s) 417
AgsI TTSAA 1 cut(s) 569
AjnI CCWGG 1 cut(s) 270
AluBI AGCT 3 cut(s) 68, 258, 343
AluI AGCT 3 cut(s) 68, 258, 343
Alw26I GTCTC 1 cut(s) 441
AlwI GGATC 5 cut(s) 89, 131, 201, 479, 609
Aor13HI TCCGGA 1 cut(s) 240
Aor51HI AGCGCT 1 cut(s) 585
AoxI GGCC 3 cut(s) 48, 169, 246
ApeKI GCWGC 2 cut(s) 37, 343
ApoI RAATTY 1 cut(s) 495
ArsI GACNNNNNNTTYG 4 cut(s) 57, 69, 89, 101
AseI ATTAAT 1 cut(s) 462
AspLEI GCGC 1 cut(s) 586
AspS9I GGNCC 1 cut(s) 246
AsuC2I CCSGG 1 cut(s) 10
AsuHPI GGTGA 6 cut(s) 91, 238, 289, 367, 397, 449
BanII GRGCYC 1 cut(s) 594
BarI GAAGNNNNNNTAC 4 cut(s) 350, 382, 383, 415
BauI CACGAG 2 cut(s) 327, 338
BbvCI CCTCAGC 1 cut(s) 222
BbvI GCAGC 2 cut(s) 49, 330
BccI CCATC 2 cut(s) 83, 298
BceAI ACGGC 1 cut(s) 226
BciT130I CCWGG 1 cut(s) 272
BciVI GTATCC 1 cut(s) 191
BcnI CCSGG 1 cut(s) 10
BcoDI GTCTC 1 cut(s) 441
BfaI CTAG 1 cut(s) 408
BfmI CTRYAG 1 cut(s) 35
BfoI RGCGCY 1 cut(s) 587
BfuI GTATCC 1 cut(s) 191
BisI GCNGC 4 cut(s) 38, 151, 249, 344
BlsI GCNGC 4 cut(s) 39, 152, 250, 345
BmcAI AGTACT 2 cut(s) 368, 401
Bme1390I CCNGG 2 cut(s) 10, 272
BmgT120I GGNCC 1 cut(s) 246
BmrFI CCNGG 2 cut(s) 10, 272
BmrI ACTGGG 1 cut(s) 179
BmuI ACTGGG 1 cut(s) 179
Bpu10I CCTNAGC 1 cut(s) 222
BpuEI CTTGAG 1 cut(s) 474
BpuMI CCSGG 1 cut(s) 10
BsaJI CCNNGG 3 cut(s) 129, 283, 347
BsaWI WCCGGW 1 cut(s) 240
BsaXI ACNNNNNCTCC 2 cut(s) 436, 466
Bsc4I CCNNNNNNNGG 3 cut(s) 130, 146, 190
Bse1I ACTGG 2 cut(s) 185, 387
BseAI TCCGGA 1 cut(s) 240
BseBI CCWGG 1 cut(s) 272
BseDI CCNNGG 3 cut(s) 129, 283, 347
BseLI CCNNNNNNNGG 3 cut(s) 130, 146, 190
BseMII CTCAG 5 cut(s) 213, 285, 354, 523, 557
BseNI ACTGG 2 cut(s) 185, 387
BseRI GAGGAG 1 cut(s) 323
BseXI GCAGC 2 cut(s) 49, 330
BshFI GGCC 3 cut(s) 50, 171, 248
BsiSI CCGG 2 cut(s) 9, 241
BslFI GGGAC 2 cut(s) 92, 111
BslI CCNNNNNNNGG 3 cut(s) 130, 146, 190
BsmAI GTCTC 1 cut(s) 441
BsmFI GGGAC 2 cut(s) 92, 111
BsnI GGCC 3 cut(s) 50, 171, 248
Bsp1286I GDGCHC 1 cut(s) 594
Bsp13I TCCGGA 1 cut(s) 240
Bsp143I GATC 7 cut(s) 81, 136, 193, 228, 312, 484, 601
Bsp19I CCATGG 1 cut(s) 283
BspACI CCGC 3 cut(s) 93, 150, 249
BspANI GGCC 3 cut(s) 50, 171, 248
BspCNI CTCAG 5 cut(s) 214, 286, 355, 522, 556
BspEI TCCGGA 1 cut(s) 240
BspMAI CTGCAG 1 cut(s) 39
BspPI GGATC 5 cut(s) 89, 131, 201, 479, 609
BsrI ACTGG 2 cut(s) 185, 387
BssECI CCNNGG 3 cut(s) 129, 283, 347
BssMI GATC 7 cut(s) 81, 136, 193, 228, 312, 484, 601
BssSI CACGAG 2 cut(s) 327, 338
BssT1I CCWWGG 2 cut(s) 129, 283
Bst2BI CACGAG 2 cut(s) 327, 338
Bst2UI CCWGG 1 cut(s) 272
Bst4CI ACNGT 2 cut(s) 374, 452
BstC8I GCNNGC 3 cut(s) 215, 219, 540
BstDEI CTNAG 5 cut(s) 222, 294, 363, 509, 543
BstDSI CCRYGG 1 cut(s) 283
BstEII GGTNACC 1 cut(s) 4
BstH2I RGCGCY 1 cut(s) 587
BstHHI GCGC 1 cut(s) 586
BstKTI GATC 7 cut(s) 84, 139, 196, 231, 315, 487, 604
BstMAI GTCTC 1 cut(s) 441
BstMBI GATC 7 cut(s) 81, 136, 193, 228, 312, 484, 601
BstMWI GCNNNNNNNGC 2 cut(s) 37, 329
BstNI CCWGG 1 cut(s) 272
BstNSI RCATGY 2 cut(s) 421, 542
BstPI GGTNACC 1 cut(s) 4
BstSCI CCNGG 2 cut(s) 8, 270
BstSFI CTRYAG 1 cut(s) 35
BstV1I GCAGC 2 cut(s) 49, 330
BstX2I RGATCY 2 cut(s) 136, 193
BstYI RGATCY 2 cut(s) 136, 193
BsuI GTATCC 1 cut(s) 191
BsuRI GGCC 3 cut(s) 50, 171, 248
BtgI CCRYGG 1 cut(s) 283
BtsIMutI CAGTG 1 cut(s) 192
Cac8I GCNNGC 3 cut(s) 215, 219, 540
CfoI GCGC 1 cut(s) 586
Cfr13I GGNCC 1 cut(s) 246
CseI GACGC 1 cut(s) 20
Csp6I GTAC 3 cut(s) 367, 400, 529
CviAII CATG 4 cut(s) 284, 316, 418, 539
CviJI RGCY 8 cut(s) 50, 68, 171, 248, 258, 343, 362, 592
CviKI_1 RGCY 8 cut(s) 50, 68, 171, 248, 258, 343, 362, 592
CviQI GTAC 3 cut(s) 367, 400, 529
DdeI CTNAG 5 cut(s) 222, 294, 363, 509, 543
DpnI GATC 7 cut(s) 83, 138, 195, 230, 314, 486, 603
DpnII GATC 7 cut(s) 81, 136, 193, 228, 312, 484, 601
EciI GGCGGA 1 cut(s) 108
Eco130I CCWWGG 2 cut(s) 129, 283
Eco24I GRGCYC 1 cut(s) 594
Eco47III AGCGCT 1 cut(s) 585
Eco57I CTGAAG 1 cut(s) 600
Eco91I GGTNACC 1 cut(s) 4
EcoO65I GGTNACC 1 cut(s) 4
EcoRII CCWGG 1 cut(s) 270
EcoT14I CCWWGG 2 cut(s) 129, 283
EcoT38I GRGCYC 1 cut(s) 594
ErhI CCWWGG 2 cut(s) 129, 283
FaeI CATG 4 cut(s) 287, 319, 421, 542
FaqI GGGAC 2 cut(s) 92, 111
FatI CATG 4 cut(s) 283, 315, 417, 538
FauNDI CATATG 1 cut(s) 636
Fnu4HI GCNGC 4 cut(s) 38, 151, 249, 344
FriOI GRGCYC 1 cut(s) 594
Fsp4HI GCNGC 4 cut(s) 38, 151, 249, 344
FspBI CTAG 1 cut(s) 408
GlaI GCGC 1 cut(s) 585
GluI GCNGC 4 cut(s) 38, 151, 249, 344
HaeII RGCGCY 1 cut(s) 587
HaeIII GGCC 3 cut(s) 50, 171, 248
HapII CCGG 2 cut(s) 9, 241
HgaI GACGC 1 cut(s) 20
HhaI GCGC 1 cut(s) 586
Hin1II CATG 4 cut(s) 287, 319, 421, 542
Hin6I GCGC 1 cut(s) 584
HinP1I GCGC 1 cut(s) 584
HinfI GANTC 4 cut(s) 59, 96, 325, 640
HpaII CCGG 2 cut(s) 9, 241
HphI GGTGA 6 cut(s) 91, 238, 289, 367, 397, 449
Hpy166II GTNNAC 1 cut(s) 280
Hpy188I TCNGA 6 cut(s) 202, 512, 535, 546, 580, 601
Hpy188III TCNNGA 3 cut(s) 241, 338, 491
Hpy8I GTNNAC 1 cut(s) 280
Hpy99I CGWCG 2 cut(s) 89, 149
HpyAV CCTTC 3 cut(s) 61, 352, 385
HpyCH4III ACNGT 2 cut(s) 374, 452
HpyCH4V TGCA 3 cut(s) 37, 457, 626
HpyF10VI GCNNNNNNNGC 2 cut(s) 37, 329
HpyF3I CTNAG 5 cut(s) 222, 294, 363, 509, 543
Hsp92II CATG 4 cut(s) 287, 319, 421, 542
HspAI GCGC 1 cut(s) 584
Kpn2I TCCGGA 1 cut(s) 240
Kzo9I GATC 7 cut(s) 81, 136, 193, 228, 312, 484, 601
LmnI GCTCC 1 cut(s) 535
Lsp1109I GCAGC 2 cut(s) 49, 330
MaeI CTAG 1 cut(s) 408
MaeIII GTNAC 2 cut(s) 4, 556
MalI GATC 7 cut(s) 83, 138, 195, 230, 314, 486, 603
MboI GATC 7 cut(s) 81, 136, 193, 228, 312, 484, 601
MboII GAAGA 3 cut(s) 146, 172, 259
MflI RGATCY 2 cut(s) 136, 193
MhlI GDGCHC 1 cut(s) 594
MluCI AATT 4 cut(s) 114, 495, 548, 569
MlyI GAGTC 1 cut(s) 319
MroI TCCGGA 1 cut(s) 240
MseI TTAA 3 cut(s) 462, 645, 655
MspI CCGG 2 cut(s) 9, 241
MspR9I CCNGG 2 cut(s) 10, 272
MvaI CCWGG 1 cut(s) 272
MwoI GCNNNNNNNGC 2 cut(s) 37, 329
NciI CCSGG 1 cut(s) 10
NcoI CCATGG 1 cut(s) 283
NdeI CATATG 1 cut(s) 636
NdeII GATC 7 cut(s) 81, 136, 193, 228, 312, 484, 601
NlaIII CATG 4 cut(s) 287, 319, 421, 542
NmeAIII GCCGAG 1 cut(s) 372
NmuCI GTSAC 2 cut(s) 4, 556
NspI RCATGY 2 cut(s) 421, 542
PaeI GCATGC 1 cut(s) 542
PciI ACATGT 1 cut(s) 417
PfeI GAWTC 3 cut(s) 59, 96, 640
PflFI GACNNNGTC 1 cut(s) 236
PkrI GCNGC 4 cut(s) 39, 152, 250, 345
PleI GAGTC 1 cut(s) 319
PpsI GAGTC 1 cut(s) 319
PscI ACATGT 1 cut(s) 417
PshBI ATTAAT 1 cut(s) 462
Psp6I CCWGG 1 cut(s) 270
PspEI GGTNACC 1 cut(s) 4
PspGI CCWGG 1 cut(s) 270
PspPI GGNCC 1 cut(s) 246
PstI CTGCAG 1 cut(s) 39
PsuI RGATCY 2 cut(s) 136, 193
PsyI GACNNNGTC 1 cut(s) 236
RsaI GTAC 3 cut(s) 368, 401, 530
RsaNI GTAC 3 cut(s) 367, 400, 529
SaqAI TTAA 3 cut(s) 462, 645, 655
SatI GCNGC 4 cut(s) 38, 151, 249, 344
Sau3AI GATC 7 cut(s) 81, 136, 193, 228, 312, 484, 601
Sau96I GGNCC 1 cut(s) 246
ScaI AGTACT 2 cut(s) 368, 401
SchI GAGTC 1 cut(s) 319
ScrFI CCNGG 2 cut(s) 10, 272
SduI GDGCHC 1 cut(s) 594
SetI ASST 9 cut(s) 70, 228, 260, 276, 345, 357, 396, 530, 556
SfcI CTRYAG 1 cut(s) 35
SmlI CTYRAG 2 cut(s) 16, 489
SmoI CTYRAG 2 cut(s) 16, 489
SphI GCATGC 1 cut(s) 542
Sse9I AATT 4 cut(s) 114, 495, 548, 569
SsiI CCGC 3 cut(s) 93, 150, 249
SspMI CTAG 1 cut(s) 408
StyD4I CCNGG 2 cut(s) 8, 270
StyI CCWWGG 2 cut(s) 129, 283
TaaI ACNGT 2 cut(s) 374, 452
TaqI TCGA 3 cut(s) 54, 87, 231
TasI AATT 4 cut(s) 114, 495, 548, 569
TatI WGTACW 2 cut(s) 366, 399
TauI GCSGC 2 cut(s) 153, 251
TfiI GAWTC 3 cut(s) 59, 96, 640
Tru1I TTAA 3 cut(s) 462, 645, 655
Tru9I TTAA 3 cut(s) 462, 645, 655
TscAI CASTG 1 cut(s) 192
TseFI GTSAC 2 cut(s) 4, 556
TseI GCWGC 2 cut(s) 37, 343
Tsp45I GTSAC 2 cut(s) 4, 556
TspDTI ATGAA 1 cut(s) 72
TspGWI ACGGA 2 cut(s) 113, 133
TspRI CASTG 1 cut(s) 192
Tth111I GACNNNGTC 1 cut(s) 236
VspI ATTAAT 1 cut(s) 462
XapI RAATTY 1 cut(s) 495
XceI RCATGY 2 cut(s) 421, 542
XspI CTAG 1 cut(s) 408
ZrmI AGTACT 2 cut(s) 368, 401
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.