Rroxscaffold_5G00337270

Belongs to the iron ascorbate-dependent oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0000054
Physical Location & Seq
Forward (+)
5351687 .. 5354796
3110 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00337270.1

Sequence Viewer

Length: 1338 bp
ATGGTAGCTACCAACAGAAATGAGGTTGCAACCCACTATGACAGAAAACCTGAACTAAAAGCTTTTGATGATACAAAGGAAGGTGTTAAAGGCCTTGTAGATGCTGGCATAACCGAAATTCCTCGAATTTTTTATCATCCACCTGAAGAATGCTCCATTGACAATACCTCTGGTTCAGAAGAAGTCCGGTTTAGCATTCCGGTCATAGACCTCGAAGGCCTCTTCGATCCAACTAAACGAAAGGAGATTGTTGCAGCTGCTGAAGAAGCATCAGAGACTTGGGGATTCTTTCAAATTTCCAATCATGGAATACCTTTTCATGTGCTGGAGGAGATGAAGGACGGGGTTCGTGGGTTTCATGAGCAGGATACCGAAGTGAAGAAACAGTTCTATACTCGTGATCACTCCAGTAGTCCATTCGTCTACAACAGCAACTTTGATCTGTATAGTGCACCGGCAACTAATTGGAGGGATAGTTTTTTGTGTTATATGGCTCCTACTCCTCCTAACACAGAAGACTTGCCAGAAGTATGCAGAGAAATCCTCGTTGAATACTCGAAGCAAGTAATGAAGTTGGGGAAGCTATTGTTTGAGTTGTTGTCCGAGGCCCTTGGCCTAAATCCAAGTCACTTGAATGACATAGATTTCAGTGAGGGGCTTCTGGTTTTAGGCCATTACTATCCTGCCTGTCCACAACCAGAGTTAACAATAGGCACAAGCAAGCATGCAGATAATACCTTCATCACTGTTCTTCTGCAAGATAATATTGGTGGTCTTCAAGTCCTTCACCAGAACAAATGGATTGATCTTATATCAAATGACAGATTCAATAGTGTAGAGCACAGGGTATTGGCAAACCATAGAGGTCCTAGGGTATCAGTTGCAAGCTTTTTCAGCACAGGAATGCTGCCATCGACAAAGCTCTACGGACCAATCAAGGAGTTATTATCAGACGACAATCCTCCAAAGTACAGGGAGACTACTGTTAGGGACTATGTTGCCTACTTCAATGAGAAAGGCCTTGATGCTTCTGTTGGAGAGTTTGGCTGCTATGATTTACTACGTGGAAATCAGGTTCCAACAAAGTATCGCAGAACAAATGAACTAAAAGCTTTTAATGACACAAAGGAAGATGTTAAAGGCCTTGTTGATGCTGGCATTAGCGAGATTCCTAGAATTTTTTATCATCTACATGATGAGTACTCCATTAACAATACCTCTTATTCAGAGGAAGCCTGGTTTACCATTCCAGTCATAGACTTCAACGTTCTCCTAGATCCAACTAAGCGAAAGGAGAATGTTGCACATGTGGGAGAAACATCAGAGACTTGTGGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2OG-FeII_Oxy DIOX_N

Protein Analysis

445

Amino Acids

50.42

Weight (kDa)

5.01

Isoelectric Point (pI)

38.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 66 - 165 3.7e-17 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 223 - 299 3.6e-17 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000054)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03400 AT1G03400 AT1G03410 AT1G03410 AT1G04350 AT1G06620 AT1G06620 AT1G06640 AT1G06640 AT1G06640 AT1G06645 AT1G06650 AT1G06650 AT2G25450 AT2G30830 AT2G30840 AT2G30840 AT2G30840 AT3G61400 AT3G61400 AT5G43440 AT5G43440 AT5G43450 AT5G43450 AT5G59530 AT5G59540 AT5G59540
fragaria_vesca FvH4_2g03190 FvH4_2g03220 FvH4_3g07861 FvH4_3g31880 FvH4_3g31880 FvH4_3g31880 FvH4_4g03241 FvH4_4g03250 FvH4_4g03251 FvH4_4g03260 FvH4_4g03300 FvH4_4g03301 FvH4_4g03301 FvH4_4g03301 FvH4_4g03302 FvH4_4g03303 FvH4_4g03303 FvH4_4g03304 FvH4_4g03305 FvH4_4g03323 FvH4_4g03323 FvH4_5g19290 FvH4_5g19290 FvH4_5g19290 FvH4_5g19291 FvH4_5g19291 FvH4_5g19310 FvH4_5g19310 FvH4_5g19310 FvH4_5g19320 FvH4_5g19321 FvH4_5g19321 FvH4_5g19321 FvH4_7g31470
malus_domestica MD00G1220300.v1.1 MD02G1050800.v1.1 MD02G1053200.v1.1 MD02G1053300.v1.1 MD02G1054900.v1.1 MD03G1032300.v1.1 MD03G1245000.v1.1 MD03G1245300.v1.1 MD05G1014200.v1.1 MD13G1210900.v1.1 MD13G1211000.v1.1 MD13G1211100.v1.1 MD13G1211200.v1.1 MD13G1211800.v1.1 MD13G1211900.v1.1 MD13G1212000.v1.1 MD16G1214100.v1.1 MD16G1214300.v1.1 MD16G1214400.v1.1 MD16G1214600.v1.1 MD16G1215000.v1.1 MD16G1215200.v1.1 MD16G1215300.v1.1 MD16G1215500.v1.1 MD16G1271000.v1.1
prunus_persica Prupe.1G035500_v2.0.a1 Prupe.1G035700_v2.0.a1 Prupe.1G035800_v2.0.a1 Prupe.1G035900_v2.0.a1 Prupe.1G036000_v2.0.a1 Prupe.1G036100_v2.0.a1 Prupe.1G036200_v2.0.a1 Prupe.1G036400_v2.0.a1 Prupe.1G036500_v2.0.a1 Prupe.1G036600_v2.0.a1 Prupe.1G036700_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G191000_v2.0.a1 Prupe.1G191100_v2.0.a1
pyrus_communis pycom13g18340 pycom13g18350 pycom13g18380 pycom16g17990 pycom16g18010 pycom16g18020
rosa_chinensis RchiOBHm_Chr2g0124051 RchiOBHm_Chr4g0391811 RchiOBHm_Chr4g0391931 RchiOBHm_Chr4g0391961 RchiOBHm_Chr4g0391971 RchiOBHm_Chr4g0391981 RchiOBHm_Chr4g0391991 RchiOBHm_Chr4g0392031 RchiOBHm_Chr4g0392051 RchiOBHm_Chr4g0392061 RchiOBHm_Chr4g0392071 RchiOBHm_Chr4g0392081 RchiOBHm_Chr4g0392091 RchiOBHm_Chr4g0392111 RchiOBHm_Chr4g0392121 RchiOBHm_Chr4g0392131 RchiOBHm_Chr4g0392141 RchiOBHm_Chr4g0392151 RchiOBHm_Chr4g0392211 RchiOBHm_Chr4g0392251 RchiOBHm_Chr4g0392261 RchiOBHm_Chr4g0392301 RchiOBHm_Chr4g0392311 RchiOBHm_Chr4g0392341 RchiOBHm_Chr4g0409221 RchiOBHm_Chr4g0410991 RchiOBHm_Chr4g0429131 RchiOBHm_Chr4g0437051 RchiOBHm_Chr5g0038681 RchiOBHm_Chr5g0047071 RchiOBHm_Chr5g0058651 RchiOBHm_Chr6g0248121 RchiOBHm_Chr6g0248141 RchiOBHm_Chr6g0248291 RchiOBHm_Chr6g0248341 RchiOBHm_Chr6g0248351
rosa_laevigata RLG00000006473 RLG00000006475 RLG00000006667 RLG00000007095 RLG00000009819 RLG00000009820 RLG00000009821 RLG00000009822 RLG00000009825 RLG00000009826 RLG00000009830 RLG00000009831 RLG00000009832 RLG00000009833 RLG00000009834 RLG00000009835 RLG00000009837 RLG00000009838 RLG00000009839 RLG00000009841 RLG00000009842 RLG00000009844 RLG00000009845 RLG00000009846 RLG00000009847 RLG00000009848 RLG00000009849 RLG00000015160 RLG00000015161 RLG00000017791 RLG00000018779 RLG00000034461 RLG00000035237
rosa_multiflora Rmu_co8253791.1_g000001 Rmu_co8348827.1_g000001 Rmu_co8400489.1_g000001 Rmu_sc0000383.1_g000003 Rmu_sc0000383.1_g000005 Rmu_sc0000383.1_g000026 Rmu_sc0000846.1_g000012 Rmu_sc0001231.1_g000013 Rmu_sc0001231.1_g000026 Rmu_sc0001231.1_g000028 Rmu_sc0001800.1_g000027 Rmu_sc0003436.1_g000022 Rmu_sc0004104.1_g000004 Rmu_sc0004295.1_g000021 Rmu_sc0004295.1_g000031 Rmu_sc0004928.1_g000002 Rmu_sc0004928.1_g000008 Rmu_sc0004928.1_g000011 Rmu_sc0004928.1_g000027 Rmu_sc0004977.1_g000007 Rmu_sc0005018.1_g000002 Rmu_sc0005091.1_g000026 Rmu_sc0005091.1_g000032 Rmu_sc0005091.1_g000033 Rmu_sc0005817.1_g000003 Rmu_sc0005817.1_g000008 Rmu_sc0012482.1_g000002 Rmu_sc0014210.1_g000001 Rmu_sc0016150.1_g000001 Rmu_sc0029701.1_g000002 Rmu_sc0036585.1_g000001 Rmu_sc0037489.1_g000002
rosa_roxburghii Rroxscaffold_1G00021790 Rroxscaffold_1G00021800 Rroxscaffold_1G00034360 Rroxscaffold_2G00120130 Rroxscaffold_5G00337210 Rroxscaffold_5G00337220 Rroxscaffold_5G00337230 Rroxscaffold_5G00337250 Rroxscaffold_5G00337260 Rroxscaffold_5G00337270 Rroxscaffold_5G00337300 Rroxscaffold_5G00337310 Rroxscaffold_5G00337320 Rroxscaffold_5G00337330 Rroxscaffold_5G00337350 Rroxscaffold_5G00337370 Rroxscaffold_5G00337390 Rroxscaffold_5G00337400 Rroxscaffold_5G00337420 Rroxscaffold_5G00337430 Rroxscaffold_5G00337450 Rroxscaffold_5G00337470 Rroxscaffold_5G00337480 Rroxscaffold_5G00337520 Rroxscaffold_5G00378130 Rroxscaffold_6G00397800 Rroxscaffold_7G00213320 Rroxscaffold_7G00213390 Rroxscaffold_7G00213420 Rroxscaffold_7G00213470
rosa_rugosa Rorug02G0070100 Rorug02G0070100 Rorug02G0070100 Rorug02G0128600 Rorug02G0128700 Rorug02G0128800 Rorug02G0128900 Rorug02G0248400 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337100 Rorug03G0337200 Rorug03G0337300 Rorug03G0337600 Rorug03G0337700 Rorug03G0337800 Rorug03G0337900 Rorug03G0337900 Rorug03G0338000 Rorug03G0338100 Rorug03G0338200 Rorug04G0233200.1 Rorug04G0297900 Rorug05G0233700 Rorug05G0316700 Rorug05G0530800 Rorug05G0530900
rosa_samantha Rh2AG307400 Rh2BG316500 Rh2DG331200 Rh4AG039300 Rh4AG039400 Rh4AG039600 Rh4AG039700 Rh4AG039900 Rh4AG040000 Rh4AG040100 Rh4AG040300 Rh4AG040500 Rh4AG040700 Rh4AG041000 Rh4AG041100 Rh4AG041600 Rh4AG041800 Rh4AG041900 Rh4AG352400 Rh4BG033200 Rh4BG034100 Rh4BG034300 Rh4BG034700 Rh4BG034800 Rh4BG035200 Rh4BG035400 Rh4BG036000 Rh4BG036200 Rh4BG036300 Rh4BG036500 Rh4BG036800 Rh4BG361700 Rh4CG042000 Rh4CG042200 Rh4CG042300 Rh4CG042500 Rh4CG042600 Rh4CG042800 Rh4CG043200 Rh4CG043400 Rh4CG043500 Rh4CG043700 Rh4CG043800 Rh4CG044200 Rh4CG044500 Rh4CG044700 Rh4CG177000 Rh4CG310600 Rh4CG376000 Rh4DG036300 Rh4DG036900 Rh4DG037000 Rh4DG037100 Rh4DG037200 Rh4DG037300 Rh4DG037500 Rh4DG037700 Rh4DG037800 Rh4DG037900 Rh4DG038000 Rh4DG038200 Rh4DG038500 Rh4DG038700 Rh4DG038900 Rh4DG159600 Rh5CG347900 Rh5DG409900 Rh6AG045300 Rh6AG045800 Rh6AG046000 Rh6AG046100 Rh6BG040600 Rh6BG040700 Rh6BG042200 Rh6BG042700 Rh6BG042800 Rh6DG035900 Rh6DG036100 Rh6DG036200
rosa_wichuraiana Rw0G010420 Rw2G024780 Rw4G003020 Rw4G003070 Rw4G003080 Rw4G003090 Rw4G003100 Rw4G003130 Rw4G003140 Rw4G003150 Rw4G003180 Rw4G003190 Rw4G003200 Rw4G003210 Rw4G003220 Rw4G003240 Rw4G003270 Rw4G025050 Rw4G030850 Rw6G003930 Rw6G004000 Rw6G004030 Rw6G004040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 423
AclI AACGTT 1 cut(s) 1266
AclWI GGATC 2 cut(s) 221, 1271
AcsI RAATTY 4 cut(s) 117, 126, 294, 1176
AcuI CTGAAG 2 cut(s) 165, 282
AfaI GTAC 2 cut(s) 971, 1202
AflIII ACRYGT 1 cut(s) 1306
AgsI TTSAA 7 cut(s) 293, 551, 634, 779, 829, 1009, 1264
AjnI CCWGG 1 cut(s) 1235
AloI GAACNNNNNNTCC 2 cut(s) 1059, 1091
AluBI AGCT 7 cut(s) 8, 62, 257, 583, 888, 922, 1112
AluI AGCT 7 cut(s) 8, 62, 257, 583, 888, 922, 1112
Alw21I GWGCWC 2 cut(s) 454, 843
Alw26I GTCTC 3 cut(s) 269, 971, 1319
Alw44I GTGCAC 1 cut(s) 450
AlwI GGATC 2 cut(s) 221, 1271
AlwNI CAGNNNCTG 1 cut(s) 260
AoxI GGCC 7 cut(s) 91, 217, 606, 613, 670, 1018, 1141
ApaLI GTGCAC 1 cut(s) 450
ApeKI GCWGC 4 cut(s) 254, 257, 907, 1047
ApoI RAATTY 4 cut(s) 117, 126, 294, 1176
Asp700I GAANNNNTTC 1 cut(s) 386
AspA2I CCTAGG 1 cut(s) 869
AspS9I GGNCC 3 cut(s) 607, 866, 929
AsuHPI GGTGA 1 cut(s) 779
AvaII GGWCC 2 cut(s) 866, 929
AvrII CCTAGG 1 cut(s) 869
BaeGI GKGCMC 1 cut(s) 454
BaeI ACNNNNGTAYC 2 cut(s) 360, 393
BauI CACGAG 1 cut(s) 396
BbsI GAAGAC 2 cut(s) 522, 767
Bbv12I GWGCWC 2 cut(s) 454, 843
BbvI GCAGC 4 cut(s) 244, 266, 894, 1034
BccI CCATC 1 cut(s) 919
BciT130I CCWGG 1 cut(s) 1237
BciVI GTATCC 1 cut(s) 361
BclI TGATCA 1 cut(s) 400
BcoDI GTCTC 3 cut(s) 269, 971, 1319
BfaI CTAG 3 cut(s) 870, 1173, 1274
BfuI GTATCC 1 cut(s) 361
BisI GCNGC 4 cut(s) 255, 258, 908, 1048
BlnI CCTAGG 1 cut(s) 869
BlsI GCNGC 4 cut(s) 256, 259, 909, 1049
BmcAI AGTACT 1 cut(s) 1202
Bme1390I CCNGG 1 cut(s) 1237
Bme18I GGWCC 2 cut(s) 866, 929
BmgT120I GGNCC 3 cut(s) 607, 866, 929
BmiI GGNNCC 2 cut(s) 495, 1077
BmrFI CCNGG 1 cut(s) 1237
BmsI GCATC 4 cut(s) 91, 278, 1015, 1141
BpiI GAAGAC 2 cut(s) 522, 767
BplI GAGNNNNNCTC 2 cut(s) 528, 560
BpmI CTGGAG 2 cut(s) 347, 391
BsaAI YACGTR 1 cut(s) 1064
BsaJI CCNNGG 3 cut(s) 603, 610, 869
BsaWI WCCGGW 2 cut(s) 186, 199
BsaXI ACNNNNNCTCC 2 cut(s) 460, 490
Bse118I RCCGGY 1 cut(s) 454
Bse1I ACTGG 2 cut(s) 408, 1250
BseBI CCWGG 1 cut(s) 1237
BseDI CCNNGG 3 cut(s) 603, 610, 869
BseGI GGATG 1 cut(s) 136
BseNI ACTGG 2 cut(s) 408, 1250
BseRI GAGGAG 2 cut(s) 344, 492
BseSI GKGCMC 1 cut(s) 454
BseXI GCAGC 4 cut(s) 244, 266, 894, 1034
BshFI GGCC 7 cut(s) 93, 219, 608, 615, 672, 1020, 1143
BsiHKAI GWGCWC 2 cut(s) 454, 843
BsiSI CCGG 3 cut(s) 187, 200, 455
BslFI GGGAC 1 cut(s) 1004
BsmAI GTCTC 3 cut(s) 269, 971, 1319
BsmFI GGGAC 1 cut(s) 1004
BsmI GAATGC 3 cut(s) 155, 195, 909
BsnI GGCC 7 cut(s) 93, 219, 608, 615, 672, 1020, 1143
Bsp1286I GDGCHC 2 cut(s) 454, 843
Bsp143I GATC 5 cut(s) 226, 400, 439, 805, 1276
BspANI GGCC 7 cut(s) 93, 219, 608, 615, 672, 1020, 1143
BspHI TCATGA 1 cut(s) 358
BspLI GGNNCC 2 cut(s) 495, 1077
BspPI GGATC 2 cut(s) 221, 1271
BsrFI RCCGGY 1 cut(s) 454
BsrI ACTGG 2 cut(s) 408, 1250
BssAI RCCGGY 1 cut(s) 454
BssECI CCNNGG 3 cut(s) 603, 610, 869
BssMI GATC 5 cut(s) 226, 400, 439, 805, 1276
BssSI CACGAG 1 cut(s) 396
BssT1I CCWWGG 2 cut(s) 610, 869
Bst2BI CACGAG 1 cut(s) 396
Bst2UI CCWGG 1 cut(s) 1237
Bst4CI ACNGT 3 cut(s) 387, 748, 985
Bst6I CTCTTC 1 cut(s) 227
BstBAI YACGTR 1 cut(s) 1064
BstC8I GCNNGC 5 cut(s) 106, 722, 726, 886, 1156
BstDEI CTNAG 1 cut(s) 1284
BstF5I GGATG 1 cut(s) 136
BstKTI GATC 5 cut(s) 229, 403, 442, 808, 1279
BstMAI GTCTC 3 cut(s) 269, 971, 1319
BstMBI GATC 5 cut(s) 226, 400, 439, 805, 1276
BstMWI GCNNNNNNNGC 2 cut(s) 266, 894
BstNI CCWGG 1 cut(s) 1237
BstNSI RCATGY 2 cut(s) 728, 1310
BstSCI CCNGG 1 cut(s) 1235
BstSLI GKGCMC 1 cut(s) 454
BstV1I GCAGC 4 cut(s) 244, 266, 894, 1034
BstV2I GAAGAC 2 cut(s) 522, 767
BstX2I RGATCY 1 cut(s) 1276
BstYI RGATCY 1 cut(s) 1276
BsuI GTATCC 1 cut(s) 361
BsuRI GGCC 7 cut(s) 93, 219, 608, 615, 672, 1020, 1143
BtsCI GGATG 1 cut(s) 136
BtsIMutI CAGTG 2 cut(s) 655, 744
Cac8I GCNNGC 5 cut(s) 106, 722, 726, 886, 1156
CaiI CAGNNNCTG 1 cut(s) 260
CciI TCATGA 1 cut(s) 358
Cfr10I RCCGGY 1 cut(s) 454
Cfr13I GGNCC 3 cut(s) 607, 866, 929
Csp6I GTAC 2 cut(s) 970, 1201
CviAII CATG 6 cut(s) 305, 320, 359, 725, 1193, 1307
CviQI GTAC 2 cut(s) 970, 1201
DdeI CTNAG 1 cut(s) 1284
DpnI GATC 5 cut(s) 228, 402, 441, 807, 1278
DpnII GATC 5 cut(s) 226, 400, 439, 805, 1276
Eam1104I CTCTTC 1 cut(s) 227
EarI CTCTTC 1 cut(s) 227
Eco130I CCWWGG 2 cut(s) 610, 869
Eco147I AGGCCT 4 cut(s) 93, 219, 1020, 1143
Eco47I GGWCC 2 cut(s) 866, 929
Eco57I CTGAAG 2 cut(s) 165, 282
EcoO109I RGGNCCY 2 cut(s) 607, 866
EcoRII CCWGG 1 cut(s) 1235
EcoT14I CCWWGG 2 cut(s) 610, 869
ErhI CCWWGG 2 cut(s) 610, 869
FaeI CATG 6 cut(s) 308, 323, 362, 728, 1196, 1310
FaqI GGGAC 1 cut(s) 1004
FatI CATG 6 cut(s) 304, 319, 358, 724, 1192, 1306
FbaI TGATCA 1 cut(s) 400
FblI GTMKAC 1 cut(s) 423
Fnu4HI GCNGC 4 cut(s) 255, 258, 908, 1048
FokI GGATG 1 cut(s) 123
Fsp4HI GCNGC 4 cut(s) 255, 258, 908, 1048
FspBI CTAG 3 cut(s) 870, 1173, 1274
GluI GCNGC 4 cut(s) 255, 258, 908, 1048
GsuI CTGGAG 2 cut(s) 347, 391
HaeIII GGCC 7 cut(s) 93, 219, 608, 615, 672, 1020, 1143
HapII CCGG 3 cut(s) 187, 200, 455
Hin1II CATG 6 cut(s) 308, 323, 362, 728, 1196, 1310
HincII GTYRAC 1 cut(s) 705
HindII GTYRAC 1 cut(s) 705
HindIII AAGCTT 3 cut(s) 60, 886, 1110
HinfI GANTC 3 cut(s) 285, 825, 1168
HpaI GTTAAC 1 cut(s) 705
HpaII CCGG 3 cut(s) 187, 200, 455
HphI GGTGA 1 cut(s) 779
Hpy166II GTNNAC 5 cut(s) 424, 452, 692, 705, 1242
Hpy188I TCNGA 6 cut(s) 178, 274, 604, 952, 1228, 1324
Hpy188III TCNNGA 2 cut(s) 359, 398
Hpy8I GTNNAC 5 cut(s) 424, 452, 692, 705, 1242
HpyAV CCTTC 5 cut(s) 74, 209, 331, 748, 794
HpyCH4III ACNGT 3 cut(s) 387, 748, 985
HpyCH4IV ACGT 2 cut(s) 1063, 1266
HpyCH4V TGCA 8 cut(s) 29, 254, 452, 534, 728, 757, 884, 1304
HpyF10VI GCNNNNNNNGC 2 cut(s) 266, 894
HpyF3I CTNAG 1 cut(s) 1284
HpySE526I ACGT 2 cut(s) 1063, 1266
Hsp92II CATG 6 cut(s) 308, 323, 362, 728, 1196, 1310
Ksp22I TGATCA 1 cut(s) 400
KspAI GTTAAC 1 cut(s) 705
Kzo9I GATC 5 cut(s) 226, 400, 439, 805, 1276
LmnI GCTCC 2 cut(s) 158, 499
Lsp1109I GCAGC 4 cut(s) 244, 266, 894, 1034
LweI GCATC 4 cut(s) 91, 278, 1015, 1141
MaeI CTAG 3 cut(s) 870, 1173, 1274
MaeII ACGT 2 cut(s) 1063, 1266
MaeIII GTNAC 1 cut(s) 626
MalI GATC 5 cut(s) 228, 402, 441, 807, 1278
MboI GATC 5 cut(s) 226, 400, 439, 805, 1276
MboII GAAGA 9 cut(s) 158, 191, 214, 275, 391, 527, 743, 767, 1142
MflI RGATCY 1 cut(s) 1276
MhlI GDGCHC 2 cut(s) 454, 843
MluCI AATT 5 cut(s) 117, 126, 294, 463, 1176
MmeI TCCRAC 4 cut(s) 254, 1015, 1103, 1304
MroXI GAANNNNTTC 1 cut(s) 386
MseI TTAA 6 cut(s) 87, 704, 1116, 1137, 1209, 1336
MslI CAYNNNNRTG 3 cut(s) 633, 902, 1191
MspA1I CMGCKG 1 cut(s) 257
MspI CCGG 3 cut(s) 187, 200, 455
MspR9I CCNGG 1 cut(s) 1237
Mva1269I GAATGC 3 cut(s) 155, 195, 909
MvaI CCWGG 1 cut(s) 1237
MwoI GCNNNNNNNGC 2 cut(s) 266, 894
NdeII GATC 5 cut(s) 226, 400, 439, 805, 1276
NlaIII CATG 6 cut(s) 308, 323, 362, 728, 1196, 1310
NlaIV GGNNCC 2 cut(s) 495, 1077
NmuCI GTSAC 1 cut(s) 626
NspI RCATGY 2 cut(s) 728, 1310
PaeI GCATGC 1 cut(s) 728
PagI TCATGA 1 cut(s) 358
PceI AGGCCT 4 cut(s) 93, 219, 1020, 1143
PciI ACATGT 1 cut(s) 1306
PctI GAATGC 3 cut(s) 155, 195, 909
PdmI GAANNNNTTC 1 cut(s) 386
PfeI GAWTC 3 cut(s) 285, 825, 1168
PkrI GCNGC 4 cut(s) 256, 259, 909, 1049
Ppu21I YACGTR 1 cut(s) 1064
PpuMI RGGWCCY 1 cut(s) 866
PscI ACATGT 1 cut(s) 1306
Psp1406I AACGTT 1 cut(s) 1266
Psp5II RGGWCCY 1 cut(s) 866
Psp6I CCWGG 1 cut(s) 1235
PspGI CCWGG 1 cut(s) 1235
PspN4I GGNNCC 2 cut(s) 495, 1077
PspPI GGNCC 3 cut(s) 607, 866, 929
PspPPI RGGWCCY 1 cut(s) 866
PstNI CAGNNNCTG 1 cut(s) 260
PsuI RGATCY 1 cut(s) 1276
PvuII CAGCTG 1 cut(s) 257
RsaI GTAC 2 cut(s) 971, 1202
RsaNI GTAC 2 cut(s) 970, 1201
RseI CAYNNNNRTG 3 cut(s) 633, 902, 1191
SaqAI TTAA 6 cut(s) 87, 704, 1116, 1137, 1209, 1336
SatI GCNGC 4 cut(s) 255, 258, 908, 1048
Sau3AI GATC 5 cut(s) 226, 400, 439, 805, 1276
Sau96I GGNCC 3 cut(s) 607, 866, 929
ScaI AGTACT 1 cut(s) 1202
ScrFI CCNGG 1 cut(s) 1237
SduI GDGCHC 2 cut(s) 454, 843
SfaNI GCATC 4 cut(s) 91, 278, 1015, 1141
SinI GGWCC 2 cut(s) 866, 929
SmiMI CAYNNNNRTG 3 cut(s) 633, 902, 1191
SphI GCATGC 1 cut(s) 728
Sse9I AATT 5 cut(s) 117, 126, 294, 463, 1176
SseBI AGGCCT 4 cut(s) 93, 219, 1020, 1143
SspI AATATT 1 cut(s) 766
SspMI CTAG 3 cut(s) 870, 1173, 1274
StuI AGGCCT 4 cut(s) 93, 219, 1020, 1143
StyD4I CCNGG 1 cut(s) 1235
StyI CCWWGG 2 cut(s) 610, 869
TaaI ACNGT 3 cut(s) 387, 748, 985
TaiI ACGT 2 cut(s) 1066, 1269
TaqI TCGA 5 cut(s) 124, 213, 225, 557, 914
TasI AATT 5 cut(s) 117, 126, 294, 463, 1176
TatI WGTACW 2 cut(s) 969, 1200
TfiI GAWTC 3 cut(s) 285, 825, 1168
Tru1I TTAA 6 cut(s) 87, 704, 1116, 1137, 1209, 1336
Tru9I TTAA 6 cut(s) 87, 704, 1116, 1137, 1209, 1336
TscAI CASTG 2 cut(s) 655, 751
TseFI GTSAC 1 cut(s) 626
TseI GCWGC 4 cut(s) 254, 257, 907, 1047
Tsp45I GTSAC 1 cut(s) 626
TspDTI ATGAA 6 cut(s) 308, 347, 350, 584, 730, 1116
TspGWI ACGGA 1 cut(s) 942
TspRI CASTG 2 cut(s) 655, 751
VneI GTGCAC 1 cut(s) 450
VpaK11BI GGWCC 2 cut(s) 866, 929
XapI RAATTY 4 cut(s) 117, 126, 294, 1176
XceI RCATGY 2 cut(s) 728, 1310
XmaJI CCTAGG 1 cut(s) 869
XmiI GTMKAC 1 cut(s) 423
XmnI GAANNNNTTC 1 cut(s) 386
XspI CTAG 3 cut(s) 870, 1173, 1274
ZrmI AGTACT 1 cut(s) 1202
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.