Rh4BG036200

Belongs to the iron ascorbate-dependent oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
OG0000054
Physical Location & Seq
Forward (+)
6521684 .. 6527551
5868 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG036200.1

Sequence Viewer

Length: 1089 bp
ATGGTCCTGGGAAAATCAAGCGACCCTGATCGTCTGGAGCAGCTGAAGGCCTTCGACGAATCCAAAGCTGGTGTCAAAGGGCTCGTTGATGCCGGAATCACCAAAGTCCCACCCATTTTCGTCCGTCCAAAGAAAGATCCCTCCACCGCTCTCAACCATAAGATATCTGGCCATTTCAGTATTCCAGTGGTTGATCTGGCTGACAATGAAGGAAGATCTGCCGAGGTGATCGACCAAGTCCGGAGGGCCGCAGAGAGTTACGGGTTGTTTCAGGTGGTGAACCATGGGATACCTGAGAGAGTGATGGAGGACATGATGGAGGCAACGCATGGCTTTCACGAGCTTCCCAGGGAGGCCAAGGCTGAGTACTATGGTCGGGAGCTTGCAAGGAACGTCAAGTACTTCTCTGGCAGTTCCCTCTATCTGTTGATGTTTGCTGATTGGAGGGACACTTTGCAGTGTAACATAAGTGACGAGCAGTTCGATCCTCAAGAAATTCCTCTCGTTTGCAGAGATATAATTATGGAGTATTCTATGCATGCTCACAAATTAGGTGTCATTTTGTTTGCATTGCTATCTGAGGCGCTTGGGCTCAAACCTGATCACCTCAAAAACATGGATTGCGCAGAGGAGCATGTGATTCTTAATCATTACTATCCCCCATGCCCGGAACCTGAACTAGCTATTGGTACTATCGAACACGCAGATCCTGATTTTCTGACAATCCTACTTCAAGACCAAATTGGTGGACTCCAGGTTTTGTACCAAAACCAGTGGATTGATGTTCCTCATGTACCTGGAGCTCTGGTGGTGAACATTGGAGATTTCTTGCAGATAATGTCAAACAATAAGTTCATAAGCGTCAATCACAGAGTATTGGCTAAAAAGGAAGGTCCCAGAATTTCTGTGGCATGTTTTTTCAGACCATCACTAGAAAACTCTTCGAGATTGTATGGGCCAATCAAGGAGTTGACATCAGAAGAAAAACCTCCAGTTTACCGAGAAACAACTATGAAAGATTATACTCAGTGCCACTACAAACAATGGGAAGCAAATGAGGTATCCGGGCTTGAAAGCTTGAAGCTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2OG-FeII_Oxy DIOX_N

Protein Analysis

362

Amino Acids

40.93

Weight (kDa)

5.4

Isoelectric Point (pI)

40.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 61 - 164 7.3e-19 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 211 - 309 9e-35 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000054)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03400 AT1G03400 AT1G03410 AT1G03410 AT1G04350 AT1G06620 AT1G06620 AT1G06640 AT1G06640 AT1G06640 AT1G06645 AT1G06650 AT1G06650 AT2G25450 AT2G30830 AT2G30840 AT2G30840 AT2G30840 AT3G61400 AT3G61400 AT5G43440 AT5G43440 AT5G43450 AT5G43450 AT5G59530 AT5G59540 AT5G59540
fragaria_vesca FvH4_2g03190 FvH4_2g03220 FvH4_3g07861 FvH4_3g31880 FvH4_3g31880 FvH4_3g31880 FvH4_4g03241 FvH4_4g03250 FvH4_4g03251 FvH4_4g03260 FvH4_4g03300 FvH4_4g03301 FvH4_4g03301 FvH4_4g03301 FvH4_4g03302 FvH4_4g03303 FvH4_4g03303 FvH4_4g03304 FvH4_4g03305 FvH4_4g03323 FvH4_4g03323 FvH4_5g19290 FvH4_5g19290 FvH4_5g19290 FvH4_5g19291 FvH4_5g19291 FvH4_5g19310 FvH4_5g19310 FvH4_5g19310 FvH4_5g19320 FvH4_5g19321 FvH4_5g19321 FvH4_5g19321 FvH4_7g31470
malus_domestica MD00G1220300.v1.1 MD02G1050800.v1.1 MD02G1053200.v1.1 MD02G1053300.v1.1 MD02G1054900.v1.1 MD03G1032300.v1.1 MD03G1245000.v1.1 MD03G1245300.v1.1 MD05G1014200.v1.1 MD13G1210900.v1.1 MD13G1211000.v1.1 MD13G1211100.v1.1 MD13G1211200.v1.1 MD13G1211800.v1.1 MD13G1211900.v1.1 MD13G1212000.v1.1 MD16G1214100.v1.1 MD16G1214300.v1.1 MD16G1214400.v1.1 MD16G1214600.v1.1 MD16G1215000.v1.1 MD16G1215200.v1.1 MD16G1215300.v1.1 MD16G1215500.v1.1 MD16G1271000.v1.1
prunus_persica Prupe.1G035500_v2.0.a1 Prupe.1G035700_v2.0.a1 Prupe.1G035800_v2.0.a1 Prupe.1G035900_v2.0.a1 Prupe.1G036000_v2.0.a1 Prupe.1G036100_v2.0.a1 Prupe.1G036200_v2.0.a1 Prupe.1G036400_v2.0.a1 Prupe.1G036500_v2.0.a1 Prupe.1G036600_v2.0.a1 Prupe.1G036700_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G191000_v2.0.a1 Prupe.1G191100_v2.0.a1
pyrus_communis pycom13g18340 pycom13g18350 pycom13g18380 pycom16g17990 pycom16g18010 pycom16g18020
rosa_chinensis RchiOBHm_Chr2g0124051 RchiOBHm_Chr4g0391811 RchiOBHm_Chr4g0391931 RchiOBHm_Chr4g0391961 RchiOBHm_Chr4g0391971 RchiOBHm_Chr4g0391981 RchiOBHm_Chr4g0391991 RchiOBHm_Chr4g0392031 RchiOBHm_Chr4g0392051 RchiOBHm_Chr4g0392061 RchiOBHm_Chr4g0392071 RchiOBHm_Chr4g0392081 RchiOBHm_Chr4g0392091 RchiOBHm_Chr4g0392111 RchiOBHm_Chr4g0392121 RchiOBHm_Chr4g0392131 RchiOBHm_Chr4g0392141 RchiOBHm_Chr4g0392151 RchiOBHm_Chr4g0392211 RchiOBHm_Chr4g0392251 RchiOBHm_Chr4g0392261 RchiOBHm_Chr4g0392301 RchiOBHm_Chr4g0392311 RchiOBHm_Chr4g0392341 RchiOBHm_Chr4g0409221 RchiOBHm_Chr4g0410991 RchiOBHm_Chr4g0429131 RchiOBHm_Chr4g0437051 RchiOBHm_Chr5g0038681 RchiOBHm_Chr5g0047071 RchiOBHm_Chr5g0058651 RchiOBHm_Chr6g0248121 RchiOBHm_Chr6g0248141 RchiOBHm_Chr6g0248291 RchiOBHm_Chr6g0248341 RchiOBHm_Chr6g0248351
rosa_laevigata RLG00000006473 RLG00000006475 RLG00000006667 RLG00000007095 RLG00000009819 RLG00000009820 RLG00000009821 RLG00000009822 RLG00000009825 RLG00000009826 RLG00000009830 RLG00000009831 RLG00000009832 RLG00000009833 RLG00000009834 RLG00000009835 RLG00000009837 RLG00000009838 RLG00000009839 RLG00000009841 RLG00000009842 RLG00000009844 RLG00000009845 RLG00000009846 RLG00000009847 RLG00000009848 RLG00000009849 RLG00000015160 RLG00000015161 RLG00000017791 RLG00000018779 RLG00000034461 RLG00000035237
rosa_multiflora Rmu_co8253791.1_g000001 Rmu_co8348827.1_g000001 Rmu_co8400489.1_g000001 Rmu_sc0000383.1_g000003 Rmu_sc0000383.1_g000005 Rmu_sc0000383.1_g000026 Rmu_sc0000846.1_g000012 Rmu_sc0001231.1_g000013 Rmu_sc0001231.1_g000026 Rmu_sc0001231.1_g000028 Rmu_sc0001800.1_g000027 Rmu_sc0003436.1_g000022 Rmu_sc0004104.1_g000004 Rmu_sc0004295.1_g000021 Rmu_sc0004295.1_g000031 Rmu_sc0004928.1_g000002 Rmu_sc0004928.1_g000008 Rmu_sc0004928.1_g000011 Rmu_sc0004928.1_g000027 Rmu_sc0004977.1_g000007 Rmu_sc0005018.1_g000002 Rmu_sc0005091.1_g000026 Rmu_sc0005091.1_g000032 Rmu_sc0005091.1_g000033 Rmu_sc0005817.1_g000003 Rmu_sc0005817.1_g000008 Rmu_sc0012482.1_g000002 Rmu_sc0014210.1_g000001 Rmu_sc0016150.1_g000001 Rmu_sc0029701.1_g000002 Rmu_sc0036585.1_g000001 Rmu_sc0037489.1_g000002
rosa_roxburghii Rroxscaffold_1G00021790 Rroxscaffold_1G00021800 Rroxscaffold_1G00034360 Rroxscaffold_2G00120130 Rroxscaffold_5G00337210 Rroxscaffold_5G00337220 Rroxscaffold_5G00337230 Rroxscaffold_5G00337250 Rroxscaffold_5G00337260 Rroxscaffold_5G00337270 Rroxscaffold_5G00337300 Rroxscaffold_5G00337310 Rroxscaffold_5G00337320 Rroxscaffold_5G00337330 Rroxscaffold_5G00337350 Rroxscaffold_5G00337370 Rroxscaffold_5G00337390 Rroxscaffold_5G00337400 Rroxscaffold_5G00337420 Rroxscaffold_5G00337430 Rroxscaffold_5G00337450 Rroxscaffold_5G00337470 Rroxscaffold_5G00337480 Rroxscaffold_5G00337520 Rroxscaffold_5G00378130 Rroxscaffold_6G00397800 Rroxscaffold_7G00213320 Rroxscaffold_7G00213390 Rroxscaffold_7G00213420 Rroxscaffold_7G00213470
rosa_rugosa Rorug02G0070100 Rorug02G0070100 Rorug02G0070100 Rorug02G0128600 Rorug02G0128700 Rorug02G0128800 Rorug02G0128900 Rorug02G0248400 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337100 Rorug03G0337200 Rorug03G0337300 Rorug03G0337600 Rorug03G0337700 Rorug03G0337800 Rorug03G0337900 Rorug03G0337900 Rorug03G0338000 Rorug03G0338100 Rorug03G0338200 Rorug04G0233200.1 Rorug04G0297900 Rorug05G0233700 Rorug05G0316700 Rorug05G0530800 Rorug05G0530900
rosa_samantha Rh2AG307400 Rh2BG316500 Rh2DG331200 Rh4AG039300 Rh4AG039400 Rh4AG039600 Rh4AG039700 Rh4AG039900 Rh4AG040000 Rh4AG040100 Rh4AG040300 Rh4AG040500 Rh4AG040700 Rh4AG041000 Rh4AG041100 Rh4AG041600 Rh4AG041800 Rh4AG041900 Rh4AG352400 Rh4BG033200 Rh4BG034100 Rh4BG034300 Rh4BG034700 Rh4BG034800 Rh4BG035200 Rh4BG035400 Rh4BG036000 Rh4BG036200 Rh4BG036300 Rh4BG036500 Rh4BG036800 Rh4BG361700 Rh4CG042000 Rh4CG042200 Rh4CG042300 Rh4CG042500 Rh4CG042600 Rh4CG042800 Rh4CG043200 Rh4CG043400 Rh4CG043500 Rh4CG043700 Rh4CG043800 Rh4CG044200 Rh4CG044500 Rh4CG044700 Rh4CG177000 Rh4CG310600 Rh4CG376000 Rh4DG036300 Rh4DG036900 Rh4DG037000 Rh4DG037100 Rh4DG037200 Rh4DG037300 Rh4DG037500 Rh4DG037700 Rh4DG037800 Rh4DG037900 Rh4DG038000 Rh4DG038200 Rh4DG038500 Rh4DG038700 Rh4DG038900 Rh4DG159600 Rh5CG347900 Rh5DG409900 Rh6AG045300 Rh6AG045800 Rh6AG046000 Rh6AG046100 Rh6BG040600 Rh6BG040700 Rh6BG042200 Rh6BG042700 Rh6BG042800 Rh6DG035900 Rh6DG036100 Rh6DG036200
rosa_wichuraiana Rw0G010420 Rw2G024780 Rw4G003020 Rw4G003070 Rw4G003080 Rw4G003090 Rw4G003100 Rw4G003130 Rw4G003140 Rw4G003150 Rw4G003180 Rw4G003190 Rw4G003200 Rw4G003210 Rw4G003220 Rw4G003240 Rw4G003270 Rw4G025050 Rw4G030850 Rw6G003930 Rw6G004000 Rw6G004030 Rw6G004040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 625
AccBSI CCGCTC 1 cut(s) 149
AccIII TCCGGA 1 cut(s) 240
AciI CCGC 2 cut(s) 147, 249
AclWI GGATC 3 cut(s) 131, 479, 701
AcoI YGGCCR 1 cut(s) 169
AcsI RAATTY 2 cut(s) 495, 900
AcuI CTGAAG 1 cut(s) 65
AfaI GTAC 5 cut(s) 368, 401, 691, 764, 795
AfiI CCNNNNNNNGG 1 cut(s) 667
AgsI TTSAA 3 cut(s) 734, 1073, 1081
AjnI CCWGG 4 cut(s) 6, 347, 753, 796
AjuI GAANNNNNNNTTGG 2 cut(s) 669, 701
AluBI AGCT 8 cut(s) 43, 68, 343, 382, 683, 803, 1077, 1084
AluI AGCT 8 cut(s) 43, 68, 343, 382, 683, 803, 1077, 1084
Alw21I GWGCWC 1 cut(s) 805
AlwI GGATC 3 cut(s) 131, 479, 701
AlwNI CAGNNNCTG 1 cut(s) 710
Aor13HI TCCGGA 1 cut(s) 240
AoxI GGCC 5 cut(s) 48, 169, 246, 354, 956
ApeKI GCWGC 1 cut(s) 40
ApoI RAATTY 2 cut(s) 495, 900
ArsI GACNNNNNNTTYG 6 cut(s) 57, 89, 464, 496, 540, 572
Asp700I GAANNNNTTC 1 cut(s) 50
AspLEI GCGC 2 cut(s) 586, 626
AspS9I GGNCC 4 cut(s) 4, 246, 893, 956
AsuC2I CCSGG 2 cut(s) 668, 1066
AsuHPI GGTGA 5 cut(s) 91, 238, 289, 596, 823
AvaII GGWCC 2 cut(s) 4, 893
BalI TGGCCA 1 cut(s) 171
BanII GRGCYC 3 cut(s) 84, 594, 805
BauI CACGAG 1 cut(s) 338
Bbv12I GWGCWC 1 cut(s) 805
BbvI GCAGC 1 cut(s) 52
BccI CCATC 3 cut(s) 298, 310, 934
BciT130I CCWGG 4 cut(s) 8, 349, 755, 798
BciVI GTATCC 2 cut(s) 282, 1072
BclI TGATCA 1 cut(s) 601
BcnI CCSGG 2 cut(s) 668, 1066
BfaI CTAG 2 cut(s) 680, 932
BfoI RGCGCY 1 cut(s) 587
BfuI GTATCC 2 cut(s) 282, 1072
BglII AGATCT 1 cut(s) 215
BisI GCNGC 2 cut(s) 41, 249
BlsI GCNGC 2 cut(s) 42, 250
BmcAI AGTACT 2 cut(s) 368, 401
Bme1390I CCNGG 6 cut(s) 8, 349, 668, 755, 798, 1066
Bme18I GGWCC 2 cut(s) 4, 893
BmgT120I GGNCC 4 cut(s) 4, 246, 893, 956
BmiI GGNNCC 2 cut(s) 672, 895
BmrFI CCNGG 6 cut(s) 8, 349, 668, 755, 798, 1066
BmsI GCATC 1 cut(s) 79
BpmI CTGGAG 4 cut(s) 56, 737, 819, 975
BpuEI CTTGAG 1 cut(s) 474
BpuMI CCSGG 2 cut(s) 668, 1066
BsaJI CCNNGG 6 cut(s) 7, 222, 283, 347, 348, 357
BsaWI WCCGGW 1 cut(s) 240
BsaXI ACNNNNNCTCC 2 cut(s) 792, 822
Bsc4I CCNNNNNNNGG 1 cut(s) 667
Bse1I ACTGG 3 cut(s) 185, 772, 992
Bse3DI GCAATG 1 cut(s) 569
BseAI TCCGGA 1 cut(s) 240
BseBI CCWGG 4 cut(s) 8, 349, 755, 798
BseDI CCNNGG 6 cut(s) 7, 222, 283, 347, 348, 357
BseLI CCNNNNNNNGG 1 cut(s) 667
BseMI GCAATG 1 cut(s) 569
BseMII CTCAG 4 cut(s) 285, 354, 570, 1040
BseNI ACTGG 3 cut(s) 185, 772, 992
BseRI GAGGAG 1 cut(s) 644
BseXI GCAGC 1 cut(s) 52
BshFI GGCC 5 cut(s) 50, 171, 248, 356, 958
BsiHKAI GWGCWC 1 cut(s) 805
BsiSI CCGG 4 cut(s) 93, 241, 668, 1065
BslFI GGGAC 3 cut(s) 92, 461, 879
BslI CCNNNNNNNGG 1 cut(s) 667
BsmFI GGGAC 3 cut(s) 92, 461, 879
BsnI GGCC 5 cut(s) 50, 171, 248, 356, 958
Bsp1286I GDGCHC 3 cut(s) 84, 594, 805
Bsp13I TCCGGA 1 cut(s) 240
Bsp143I GATC 8 cut(s) 28, 136, 193, 215, 228, 484, 601, 706
Bsp19I CCATGG 1 cut(s) 283
BspACI CCGC 2 cut(s) 147, 249
BspANI GGCC 5 cut(s) 50, 171, 248, 356, 958
BspCNI CTCAG 4 cut(s) 286, 355, 571, 1039
BspEI TCCGGA 1 cut(s) 240
BspLI GGNNCC 2 cut(s) 672, 895
BspPI GGATC 3 cut(s) 131, 479, 701
BsrBI CCGCTC 1 cut(s) 149
BsrDI GCAATG 1 cut(s) 569
BsrI ACTGG 3 cut(s) 185, 772, 992
BssECI CCNNGG 6 cut(s) 7, 222, 283, 347, 348, 357
BssMI GATC 8 cut(s) 28, 136, 193, 215, 228, 484, 601, 706
BssSI CACGAG 1 cut(s) 338
BssT1I CCWWGG 2 cut(s) 283, 357
Bst2BI CACGAG 1 cut(s) 338
Bst2UI CCWGG 4 cut(s) 8, 349, 755, 798
Bst6I CTCTTC 1 cut(s) 946
BstC8I GCNNGC 2 cut(s) 384, 540
BstDEI CTNAG 4 cut(s) 294, 363, 579, 1026
BstDSI CCRYGG 1 cut(s) 283
BstH2I RGCGCY 1 cut(s) 587
BstHHI GCGC 2 cut(s) 586, 626
BstKTI GATC 8 cut(s) 31, 139, 196, 218, 231, 487, 604, 709
BstMBI GATC 8 cut(s) 28, 136, 193, 215, 228, 484, 601, 706
BstNI CCWGG 4 cut(s) 8, 349, 755, 798
BstNSI RCATGY 3 cut(s) 542, 638, 915
BstSCI CCNGG 6 cut(s) 6, 347, 666, 753, 796, 1064
BstV1I GCAGC 1 cut(s) 52
BstX2I RGATCY 3 cut(s) 136, 215, 706
BstXI CCANNNNNNTGG 1 cut(s) 746
BstYI RGATCY 3 cut(s) 136, 215, 706
BsuI GTATCC 2 cut(s) 282, 1072
BsuRI GGCC 5 cut(s) 50, 171, 248, 356, 958
BtgI CCRYGG 1 cut(s) 283
BtsI GCAGTG 1 cut(s) 464
BtsIMutI CAGTG 4 cut(s) 192, 464, 779, 1034
Cac8I GCNNGC 2 cut(s) 384, 540
CaiI CAGNNNCTG 1 cut(s) 710
CfoI GCGC 2 cut(s) 586, 626
Cfr13I GGNCC 4 cut(s) 4, 246, 893, 956
CseI GACGC 1 cut(s) 850
Csp6I GTAC 5 cut(s) 367, 400, 690, 763, 794
CspCI CAANNNNNGTGG 2 cut(s) 755, 790
CviAII CATG 9 cut(s) 284, 313, 329, 539, 616, 635, 663, 791, 912
CviQI GTAC 5 cut(s) 367, 400, 690, 763, 794
DdeI CTNAG 4 cut(s) 294, 363, 579, 1026
DpnI GATC 8 cut(s) 30, 138, 195, 217, 230, 486, 603, 708
DpnII GATC 8 cut(s) 28, 136, 193, 215, 228, 484, 601, 706
EaeI YGGCCR 1 cut(s) 169
Eam1104I CTCTTC 1 cut(s) 946
EarI CTCTTC 1 cut(s) 946
Ecl136II GAGCTC 1 cut(s) 803
Eco130I CCWWGG 2 cut(s) 283, 357
Eco147I AGGCCT 1 cut(s) 50
Eco24I GRGCYC 3 cut(s) 84, 594, 805
Eco32I GATATC 1 cut(s) 165
Eco47I GGWCC 2 cut(s) 4, 893
Eco53kI GAGCTC 1 cut(s) 803
Eco57I CTGAAG 1 cut(s) 65
EcoICRI GAGCTC 1 cut(s) 803
EcoO109I RGGNCCY 1 cut(s) 893
EcoRII CCWGG 4 cut(s) 6, 347, 753, 796
EcoRV GATATC 1 cut(s) 165
EcoT14I CCWWGG 2 cut(s) 283, 357
EcoT22I ATGCAT 1 cut(s) 540
EcoT38I GRGCYC 3 cut(s) 84, 594, 805
ErhI CCWWGG 2 cut(s) 283, 357
FaeI CATG 9 cut(s) 287, 316, 332, 542, 619, 638, 666, 794, 915
FaqI GGGAC 3 cut(s) 92, 461, 879
FatI CATG 9 cut(s) 283, 312, 328, 538, 615, 634, 662, 790, 911
FbaI TGATCA 1 cut(s) 601
Fnu4HI GCNGC 2 cut(s) 41, 249
FriOI GRGCYC 3 cut(s) 84, 594, 805
Fsp4HI GCNGC 2 cut(s) 41, 249
FspBI CTAG 2 cut(s) 680, 932
FspI TGCGCA 1 cut(s) 625
GlaI GCGC 2 cut(s) 585, 625
GluI GCNGC 2 cut(s) 41, 249
GsuI CTGGAG 4 cut(s) 56, 737, 819, 975
HaeII RGCGCY 1 cut(s) 587
HaeIII GGCC 5 cut(s) 50, 171, 248, 356, 958
HapII CCGG 4 cut(s) 93, 241, 668, 1065
HgaI GACGC 1 cut(s) 850
HhaI GCGC 2 cut(s) 586, 626
Hin1II CATG 9 cut(s) 287, 316, 332, 542, 619, 638, 666, 794, 915
Hin6I GCGC 2 cut(s) 584, 624
HinP1I GCGC 2 cut(s) 584, 624
HincII GTYRAC 1 cut(s) 972
HindII GTYRAC 1 cut(s) 972
HindIII AAGCTT 1 cut(s) 1075
HinfI GANTC 4 cut(s) 59, 96, 640, 750
HpaII CCGG 4 cut(s) 93, 241, 668, 1065
HphI GGTGA 5 cut(s) 91, 238, 289, 596, 823
Hpy166II GTNNAC 5 cut(s) 280, 749, 814, 972, 997
Hpy188I TCNGA 4 cut(s) 580, 720, 923, 979
Hpy188III TCNNGA 8 cut(s) 35, 241, 338, 377, 491, 710, 734, 945
Hpy8I GTNNAC 5 cut(s) 280, 749, 814, 972, 997
Hpy99I CGWCG 1 cut(s) 59
HpyAV CCTTC 4 cut(s) 40, 61, 203, 884
HpyCH4IV ACGT 1 cut(s) 393
HpyCH4V TGCA 6 cut(s) 386, 457, 510, 538, 569, 832
HpyF3I CTNAG 4 cut(s) 294, 363, 579, 1026
HpySE526I ACGT 1 cut(s) 393
Hsp92II CATG 9 cut(s) 287, 316, 332, 542, 619, 638, 666, 794, 915
HspAI GCGC 2 cut(s) 584, 624
Kpn2I TCCGGA 1 cut(s) 240
Ksp22I TGATCA 1 cut(s) 601
Kzo9I GATC 8 cut(s) 28, 136, 193, 215, 228, 484, 601, 706
LmnI GCTCC 4 cut(s) 37, 379, 631, 800
Lsp1109I GCAGC 1 cut(s) 52
LweI GCATC 1 cut(s) 79
MaeI CTAG 2 cut(s) 680, 932
MaeII ACGT 1 cut(s) 393
MaeIII GTNAC 3 cut(s) 257, 461, 470
MalI GATC 8 cut(s) 30, 138, 195, 217, 230, 486, 603, 708
MbiI CCGCTC 1 cut(s) 149
MboI GATC 8 cut(s) 28, 136, 193, 215, 228, 484, 601, 706
MboII GAAGA 3 cut(s) 225, 933, 992
MflI RGATCY 3 cut(s) 136, 215, 706
MhlI GDGCHC 3 cut(s) 84, 594, 805
MlsI TGGCCA 1 cut(s) 171
MluCI AATT 5 cut(s) 495, 519, 548, 741, 900
MluNI TGGCCA 1 cut(s) 171
MlyI GAGTC 1 cut(s) 744
Mox20I TGGCCA 1 cut(s) 171
Mph1103I ATGCAT 1 cut(s) 540
MroI TCCGGA 1 cut(s) 240
MroXI GAANNNNTTC 1 cut(s) 50
MscI TGGCCA 1 cut(s) 171
MseI TTAA 1 cut(s) 645
Msp20I TGGCCA 1 cut(s) 171
MspA1I CMGCKG 1 cut(s) 43
MspI CCGG 4 cut(s) 93, 241, 668, 1065
MspR9I CCNGG 6 cut(s) 8, 349, 668, 755, 798, 1066
MvaI CCWGG 4 cut(s) 8, 349, 755, 798
NciI CCSGG 2 cut(s) 668, 1066
NcoI CCATGG 1 cut(s) 283
NdeII GATC 8 cut(s) 28, 136, 193, 215, 228, 484, 601, 706
NlaIII CATG 9 cut(s) 287, 316, 332, 542, 619, 638, 666, 794, 915
NlaIV GGNNCC 2 cut(s) 672, 895
NmeAIII GCCGAG 1 cut(s) 247
NmuCI GTSAC 1 cut(s) 470
NsbI TGCGCA 1 cut(s) 625
NsiI ATGCAT 1 cut(s) 540
NspI RCATGY 3 cut(s) 542, 638, 915
PaeI GCATGC 1 cut(s) 542
PasI CCCWGGG 1 cut(s) 348
PceI AGGCCT 1 cut(s) 50
PcsI WCGNNNNNNNCGW 1 cut(s) 480
PdmI GAANNNNTTC 1 cut(s) 50
PfeI GAWTC 3 cut(s) 59, 96, 640
PflFI GACNNNGTC 1 cut(s) 236
PkrI GCNGC 2 cut(s) 42, 250
PleI GAGTC 1 cut(s) 744
PpsI GAGTC 1 cut(s) 744
PpuMI RGGWCCY 1 cut(s) 893
Psp124BI GAGCTC 1 cut(s) 805
Psp5II RGGWCCY 1 cut(s) 893
Psp6I CCWGG 4 cut(s) 6, 347, 753, 796
PspGI CCWGG 4 cut(s) 6, 347, 753, 796
PspN4I GGNNCC 2 cut(s) 672, 895
PspPI GGNCC 4 cut(s) 4, 246, 893, 956
PspPPI RGGWCCY 1 cut(s) 893
PsrI GAACNNNNNNTAC 2 cut(s) 383, 415
PstNI CAGNNNCTG 1 cut(s) 710
PsuI RGATCY 3 cut(s) 136, 215, 706
PsyI GACNNNGTC 1 cut(s) 236
PvuII CAGCTG 1 cut(s) 43
RsaI GTAC 5 cut(s) 368, 401, 691, 764, 795
RsaNI GTAC 5 cut(s) 367, 400, 690, 763, 794
SacI GAGCTC 1 cut(s) 805
SaqAI TTAA 1 cut(s) 645
SatI GCNGC 2 cut(s) 41, 249
Sau3AI GATC 8 cut(s) 28, 136, 193, 215, 228, 484, 601, 706
Sau96I GGNCC 4 cut(s) 4, 246, 893, 956
ScaI AGTACT 2 cut(s) 368, 401
SchI GAGTC 1 cut(s) 744
ScrFI CCNGG 6 cut(s) 8, 349, 668, 755, 798, 1066
SduI GDGCHC 3 cut(s) 84, 594, 805
SfaNI GCATC 1 cut(s) 79
SinI GGWCC 2 cut(s) 4, 893
SmlI CTYRAG 1 cut(s) 489
SmoI CTYRAG 1 cut(s) 489
SphI GCATGC 1 cut(s) 542
Sse9I AATT 5 cut(s) 495, 519, 548, 741, 900
SseBI AGGCCT 1 cut(s) 50
SsiI CCGC 2 cut(s) 147, 249
SspMI CTAG 2 cut(s) 680, 932
SstI GAGCTC 1 cut(s) 805
StuI AGGCCT 1 cut(s) 50
StyD4I CCNGG 6 cut(s) 6, 347, 666, 753, 796, 1064
StyI CCWWGG 2 cut(s) 283, 357
TaiI ACGT 1 cut(s) 396
TaqI TCGA 5 cut(s) 54, 231, 483, 696, 944
TasI AATT 5 cut(s) 495, 519, 548, 741, 900
TatI WGTACW 2 cut(s) 366, 399
TauI GCSGC 1 cut(s) 251
TfiI GAWTC 3 cut(s) 59, 96, 640
Tru1I TTAA 1 cut(s) 645
Tru9I TTAA 1 cut(s) 645
TscAI CASTG 4 cut(s) 192, 464, 779, 1034
TseFI GTSAC 1 cut(s) 470
TseI GCWGC 1 cut(s) 40
Tsp45I GTSAC 1 cut(s) 470
TspDTI ATGAA 3 cut(s) 222, 844, 1028
TspGWI ACGGA 1 cut(s) 113
TspRI CASTG 4 cut(s) 192, 464, 779, 1034
Tth111I GACNNNGTC 1 cut(s) 236
VpaK11BI GGWCC 2 cut(s) 4, 893
XapI RAATTY 2 cut(s) 495, 900
XceI RCATGY 3 cut(s) 542, 638, 915
XcmI CCANNNNNNNNNTGG 2 cut(s) 164, 904
XmnI GAANNNNTTC 1 cut(s) 50
XspI CTAG 2 cut(s) 680, 932
ZrmI AGTACT 2 cut(s) 368, 401
Zsp2I ATGCAT 1 cut(s) 540
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.