RchiOBHm_Chr2g0124051

Belongs to the iron ascorbate-dependent oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000054
Physical Location & Seq
Forward (+)
37407496 .. 37409535
2040 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ49629

Sequence Viewer

Length: 1032 bp
ATGTTCACCGGGAAATCAAGCGACCCAGAGCGTCTGCAGCAGCTGAAGGCCTTCGACGACTCCAAAACTGGTGTCAAAGGGATCGTTGATCCCGGAATCACCAAACTCTCACCAATTTTCGTCCGTCCAAAGAAAGATCCCTCCGTCGTTGGCGACCGTACGGTTTCAGGTCATTTCATTATCCCAGTGGTGGATCTGGCTGAATATAACGGAAGGCGTGCTGAGGTGATCGACCAAGTCCGGAGGGCCTCAGAGAGCTGTGGCTTCTTCCAGGTGGTAAACCATGGGATACCCAAGAGAGTGATGGAGGAGATGTTGCAGGCGGCGCGTGTGTTTCACGAGCTGCCGAGGGAGGAGAAGGCGAAGTACTATAGTAGGGAGATGGGGATGAAGGTCAAGTACTACTCTAGCAGTACCATGTATGATTTGATGTTTGCTGATTGGAAGGACACTTTGCAGTGTATCATAACTGACGAGCAGTTTGATCCTCAAGAAATTCCTCTCGTTTGCAGAGAGACAACTATGGAGTACTCTAAGCACGTTCACAAATTAGGTGTCACTTTGTTTGAATTTATATCTGAGGCGCTTGGGCTCAAACCTAATCACCTCAAAAACTTAGATATCACAAAGGGGCATATGATTCTTAGTCATTACTATCCACCATGCCCAGAGCCTAAAGTGGCTATTGGCACTGTCGAACACTCAGATCCTGATTTTATGACCATCCTACTTCAAGATCAAATTGGTGGACTTCAAGTTTTGTACCAAAATCAGTGGATTGATGTTCTTCCTCTACCTGGAGCTCTAGTGTACTGGCTAAAAAATAAAAATGAAGGTCCAAGAATTTCTGTGGCATGTTTTTTCAGACCTTCACTAGAAAACTGCTCAAGATTATATGGGCCAATCAAGGAATTAACATCAGAAGAAAACCCTCCAATTTATCAGGAAACAACAGTGAAAGATTATGTTATGTGCCACTACAAGAAATGGGAACTAGATGAGGTCTCCGGGCTAGAAGACTTGAAACTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2OG-FeII_Oxy DIOX_N

Protein Analysis

343

Amino Acids

39.33

Weight (kDa)

5.85

Isoelectric Point (pI)

40.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 61 - 163 6.6e-22 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 212 - 273 1.3e-15 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000054)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03400 AT1G03400 AT1G03410 AT1G03410 AT1G04350 AT1G06620 AT1G06620 AT1G06640 AT1G06640 AT1G06640 AT1G06645 AT1G06650 AT1G06650 AT2G25450 AT2G30830 AT2G30840 AT2G30840 AT2G30840 AT3G61400 AT3G61400 AT5G43440 AT5G43440 AT5G43450 AT5G43450 AT5G59530 AT5G59540 AT5G59540
fragaria_vesca FvH4_2g03190 FvH4_2g03220 FvH4_3g07861 FvH4_3g31880 FvH4_3g31880 FvH4_3g31880 FvH4_4g03241 FvH4_4g03250 FvH4_4g03251 FvH4_4g03260 FvH4_4g03300 FvH4_4g03301 FvH4_4g03301 FvH4_4g03301 FvH4_4g03302 FvH4_4g03303 FvH4_4g03303 FvH4_4g03304 FvH4_4g03305 FvH4_4g03323 FvH4_4g03323 FvH4_5g19290 FvH4_5g19290 FvH4_5g19290 FvH4_5g19291 FvH4_5g19291 FvH4_5g19310 FvH4_5g19310 FvH4_5g19310 FvH4_5g19320 FvH4_5g19321 FvH4_5g19321 FvH4_5g19321 FvH4_7g31470
malus_domestica MD00G1220300.v1.1 MD02G1050800.v1.1 MD02G1053200.v1.1 MD02G1053300.v1.1 MD02G1054900.v1.1 MD03G1032300.v1.1 MD03G1245000.v1.1 MD03G1245300.v1.1 MD05G1014200.v1.1 MD13G1210900.v1.1 MD13G1211000.v1.1 MD13G1211100.v1.1 MD13G1211200.v1.1 MD13G1211800.v1.1 MD13G1211900.v1.1 MD13G1212000.v1.1 MD16G1214100.v1.1 MD16G1214300.v1.1 MD16G1214400.v1.1 MD16G1214600.v1.1 MD16G1215000.v1.1 MD16G1215200.v1.1 MD16G1215300.v1.1 MD16G1215500.v1.1 MD16G1271000.v1.1
prunus_persica Prupe.1G035500_v2.0.a1 Prupe.1G035700_v2.0.a1 Prupe.1G035800_v2.0.a1 Prupe.1G035900_v2.0.a1 Prupe.1G036000_v2.0.a1 Prupe.1G036100_v2.0.a1 Prupe.1G036200_v2.0.a1 Prupe.1G036400_v2.0.a1 Prupe.1G036500_v2.0.a1 Prupe.1G036600_v2.0.a1 Prupe.1G036700_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G191000_v2.0.a1 Prupe.1G191100_v2.0.a1
pyrus_communis pycom13g18340 pycom13g18350 pycom13g18380 pycom16g17990 pycom16g18010 pycom16g18020
rosa_chinensis RchiOBHm_Chr2g0124051 RchiOBHm_Chr4g0391811 RchiOBHm_Chr4g0391931 RchiOBHm_Chr4g0391961 RchiOBHm_Chr4g0391971 RchiOBHm_Chr4g0391981 RchiOBHm_Chr4g0391991 RchiOBHm_Chr4g0392031 RchiOBHm_Chr4g0392051 RchiOBHm_Chr4g0392061 RchiOBHm_Chr4g0392071 RchiOBHm_Chr4g0392081 RchiOBHm_Chr4g0392091 RchiOBHm_Chr4g0392111 RchiOBHm_Chr4g0392121 RchiOBHm_Chr4g0392131 RchiOBHm_Chr4g0392141 RchiOBHm_Chr4g0392151 RchiOBHm_Chr4g0392211 RchiOBHm_Chr4g0392251 RchiOBHm_Chr4g0392261 RchiOBHm_Chr4g0392301 RchiOBHm_Chr4g0392311 RchiOBHm_Chr4g0392341 RchiOBHm_Chr4g0409221 RchiOBHm_Chr4g0410991 RchiOBHm_Chr4g0429131 RchiOBHm_Chr4g0437051 RchiOBHm_Chr5g0038681 RchiOBHm_Chr5g0047071 RchiOBHm_Chr5g0058651 RchiOBHm_Chr6g0248121 RchiOBHm_Chr6g0248141 RchiOBHm_Chr6g0248291 RchiOBHm_Chr6g0248341 RchiOBHm_Chr6g0248351
rosa_laevigata RLG00000006473 RLG00000006475 RLG00000006667 RLG00000007095 RLG00000009819 RLG00000009820 RLG00000009821 RLG00000009822 RLG00000009825 RLG00000009826 RLG00000009830 RLG00000009831 RLG00000009832 RLG00000009833 RLG00000009834 RLG00000009835 RLG00000009837 RLG00000009838 RLG00000009839 RLG00000009841 RLG00000009842 RLG00000009844 RLG00000009845 RLG00000009846 RLG00000009847 RLG00000009848 RLG00000009849 RLG00000015160 RLG00000015161 RLG00000017791 RLG00000018779 RLG00000034461 RLG00000035237
rosa_multiflora Rmu_co8253791.1_g000001 Rmu_co8348827.1_g000001 Rmu_co8400489.1_g000001 Rmu_sc0000383.1_g000003 Rmu_sc0000383.1_g000005 Rmu_sc0000383.1_g000026 Rmu_sc0000846.1_g000012 Rmu_sc0001231.1_g000013 Rmu_sc0001231.1_g000026 Rmu_sc0001231.1_g000028 Rmu_sc0001800.1_g000027 Rmu_sc0003436.1_g000022 Rmu_sc0004104.1_g000004 Rmu_sc0004295.1_g000021 Rmu_sc0004295.1_g000031 Rmu_sc0004928.1_g000002 Rmu_sc0004928.1_g000008 Rmu_sc0004928.1_g000011 Rmu_sc0004928.1_g000027 Rmu_sc0004977.1_g000007 Rmu_sc0005018.1_g000002 Rmu_sc0005091.1_g000026 Rmu_sc0005091.1_g000032 Rmu_sc0005091.1_g000033 Rmu_sc0005817.1_g000003 Rmu_sc0005817.1_g000008 Rmu_sc0012482.1_g000002 Rmu_sc0014210.1_g000001 Rmu_sc0016150.1_g000001 Rmu_sc0029701.1_g000002 Rmu_sc0036585.1_g000001 Rmu_sc0037489.1_g000002
rosa_roxburghii Rroxscaffold_1G00021790 Rroxscaffold_1G00021800 Rroxscaffold_1G00034360 Rroxscaffold_2G00120130 Rroxscaffold_5G00337210 Rroxscaffold_5G00337220 Rroxscaffold_5G00337230 Rroxscaffold_5G00337250 Rroxscaffold_5G00337260 Rroxscaffold_5G00337270 Rroxscaffold_5G00337300 Rroxscaffold_5G00337310 Rroxscaffold_5G00337320 Rroxscaffold_5G00337330 Rroxscaffold_5G00337350 Rroxscaffold_5G00337370 Rroxscaffold_5G00337390 Rroxscaffold_5G00337400 Rroxscaffold_5G00337420 Rroxscaffold_5G00337430 Rroxscaffold_5G00337450 Rroxscaffold_5G00337470 Rroxscaffold_5G00337480 Rroxscaffold_5G00337520 Rroxscaffold_5G00378130 Rroxscaffold_6G00397800 Rroxscaffold_7G00213320 Rroxscaffold_7G00213390 Rroxscaffold_7G00213420 Rroxscaffold_7G00213470
rosa_rugosa Rorug02G0070100 Rorug02G0070100 Rorug02G0070100 Rorug02G0128600 Rorug02G0128700 Rorug02G0128800 Rorug02G0128900 Rorug02G0248400 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337100 Rorug03G0337200 Rorug03G0337300 Rorug03G0337600 Rorug03G0337700 Rorug03G0337800 Rorug03G0337900 Rorug03G0337900 Rorug03G0338000 Rorug03G0338100 Rorug03G0338200 Rorug04G0233200.1 Rorug04G0297900 Rorug05G0233700 Rorug05G0316700 Rorug05G0530800 Rorug05G0530900
rosa_samantha Rh2AG307400 Rh2BG316500 Rh2DG331200 Rh4AG039300 Rh4AG039400 Rh4AG039600 Rh4AG039700 Rh4AG039900 Rh4AG040000 Rh4AG040100 Rh4AG040300 Rh4AG040500 Rh4AG040700 Rh4AG041000 Rh4AG041100 Rh4AG041600 Rh4AG041800 Rh4AG041900 Rh4AG352400 Rh4BG033200 Rh4BG034100 Rh4BG034300 Rh4BG034700 Rh4BG034800 Rh4BG035200 Rh4BG035400 Rh4BG036000 Rh4BG036200 Rh4BG036300 Rh4BG036500 Rh4BG036800 Rh4BG361700 Rh4CG042000 Rh4CG042200 Rh4CG042300 Rh4CG042500 Rh4CG042600 Rh4CG042800 Rh4CG043200 Rh4CG043400 Rh4CG043500 Rh4CG043700 Rh4CG043800 Rh4CG044200 Rh4CG044500 Rh4CG044700 Rh4CG177000 Rh4CG310600 Rh4CG376000 Rh4DG036300 Rh4DG036900 Rh4DG037000 Rh4DG037100 Rh4DG037200 Rh4DG037300 Rh4DG037500 Rh4DG037700 Rh4DG037800 Rh4DG037900 Rh4DG038000 Rh4DG038200 Rh4DG038500 Rh4DG038700 Rh4DG038900 Rh4DG159600 Rh5CG347900 Rh5DG409900 Rh6AG045300 Rh6AG045800 Rh6AG046000 Rh6AG046100 Rh6BG040600 Rh6BG040700 Rh6BG042200 Rh6BG042700 Rh6BG042800 Rh6DG035900 Rh6DG036100 Rh6DG036200
rosa_wichuraiana Rw0G010420 Rw2G024780 Rw4G003020 Rw4G003070 Rw4G003080 Rw4G003090 Rw4G003100 Rw4G003130 Rw4G003140 Rw4G003150 Rw4G003180 Rw4G003190 Rw4G003200 Rw4G003210 Rw4G003220 Rw4G003240 Rw4G003270 Rw4G025050 Rw4G030850 Rw6G003930 Rw6G004000 Rw6G004030 Rw6G004040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 328
AccIII TCCGGA 1 cut(s) 240
AciI CCGC 1 cut(s) 323
AclWI GGATC 6 cut(s) 83, 89, 131, 201, 479, 701
AcsI RAATTY 3 cut(s) 495, 569, 843
AcuI CTGAAG 1 cut(s) 65
AfaI GTAC 7 cut(s) 160, 368, 401, 415, 530, 764, 812
AfiI CCNNNNNNNGG 2 cut(s) 190, 797
AgsI TTSAA 4 cut(s) 569, 734, 755, 1024
AjnI CCWGG 2 cut(s) 270, 796
AluBI AGCT 4 cut(s) 43, 258, 343, 803
AluI AGCT 4 cut(s) 43, 258, 343, 803
Alw21I GWGCWC 1 cut(s) 805
Alw26I GTCTC 2 cut(s) 509, 1009
AlwI GGATC 6 cut(s) 83, 89, 131, 201, 479, 701
AlwNI CAGNNNCTG 2 cut(s) 43, 710
Aor13HI TCCGGA 1 cut(s) 240
AoxI GGCC 3 cut(s) 48, 246, 899
ApeKI GCWGC 3 cut(s) 37, 40, 343
ApoI RAATTY 3 cut(s) 495, 569, 843
ArsI GACNNNNNNTTYG 6 cut(s) 57, 89, 464, 496, 540, 572
Asp700I GAANNNNTTC 1 cut(s) 50
AspLEI GCGC 2 cut(s) 328, 586
AspS9I GGNCC 3 cut(s) 246, 836, 899
AsuC2I CCSGG 3 cut(s) 10, 93, 1009
AsuHPI GGTGA 4 cut(s) 91, 102, 238, 596
AvaII GGWCC 1 cut(s) 836
BanII GRGCYC 2 cut(s) 594, 805
BarI GAAGNNNNNNTAC 4 cut(s) 350, 382, 383, 415
BauI CACGAG 1 cut(s) 338
BbsI GAAGAC 1 cut(s) 1023
Bbv12I GWGCWC 1 cut(s) 805
BbvCI CCTCAGC 1 cut(s) 222
BbvI GCAGC 3 cut(s) 49, 52, 330
BccI CCATC 3 cut(s) 298, 376, 731
BciT130I CCWGG 2 cut(s) 272, 798
BciVI GTATCC 1 cut(s) 282
BcnI CCSGG 3 cut(s) 10, 93, 1009
BcoDI GTCTC 2 cut(s) 509, 1009
BfaI CTAG 5 cut(s) 408, 806, 875, 995, 1013
BfmI CTRYAG 2 cut(s) 35, 370
BfoI RGCGCY 1 cut(s) 587
BfuI GTATCC 1 cut(s) 282
BisI GCNGC 4 cut(s) 38, 41, 324, 344
BlsI GCNGC 4 cut(s) 39, 42, 325, 345
BmcAI AGTACT 3 cut(s) 368, 401, 530
Bme1390I CCNGG 5 cut(s) 10, 93, 272, 798, 1009
Bme18I GGWCC 1 cut(s) 836
BmgT120I GGNCC 3 cut(s) 246, 836, 899
BmrFI CCNGG 5 cut(s) 10, 93, 272, 798, 1009
BmrI ACTGGG 1 cut(s) 179
BmuI ACTGGG 1 cut(s) 179
BpiI GAAGAC 1 cut(s) 1023
BpmI CTGGAG 1 cut(s) 819
Bpu10I CCTNAGC 1 cut(s) 222
BpuEI CTTGAG 2 cut(s) 474, 871
BpuMI CCSGG 3 cut(s) 10, 93, 1009
BsaI GGTCTC 1 cut(s) 1009
BsaJI CCNNGG 2 cut(s) 283, 347
BsaWI WCCGGW 1 cut(s) 240
BsaXI ACNNNNNCTCC 4 cut(s) 299, 329, 792, 822
Bsc4I CCNNNNNNNGG 2 cut(s) 190, 797
Bse1I ACTGG 3 cut(s) 73, 185, 818
BseAI TCCGGA 1 cut(s) 240
BseBI CCWGG 2 cut(s) 272, 798
BseDI CCNNGG 2 cut(s) 283, 347
BseGI GGATG 2 cut(s) 393, 723
BseLI CCNNNNNNNGG 2 cut(s) 190, 797
BseMII CTCAG 4 cut(s) 213, 264, 570, 717
BseNI ACTGG 3 cut(s) 73, 185, 818
BseRI GAGGAG 2 cut(s) 323, 368
BseXI GCAGC 3 cut(s) 49, 52, 330
Bsh1236I CGCG 1 cut(s) 328
Bsh1285I CGRYCG 1 cut(s) 157
BshFI GGCC 3 cut(s) 50, 248, 901
BsiEI CGRYCG 1 cut(s) 157
BsiHKAI GWGCWC 1 cut(s) 805
BsiSI CCGG 4 cut(s) 9, 93, 241, 1008
BsiWI CGTACG 1 cut(s) 158
BslI CCNNNNNNNGG 2 cut(s) 190, 797
BsmAI GTCTC 2 cut(s) 509, 1009
BsnI GGCC 3 cut(s) 50, 248, 901
Bso31I GGTCTC 1 cut(s) 1009
Bsp1286I GDGCHC 2 cut(s) 594, 805
Bsp13I TCCGGA 1 cut(s) 240
Bsp143I GATC 8 cut(s) 81, 88, 136, 193, 228, 484, 706, 736
Bsp19I CCATGG 1 cut(s) 283
BspACI CCGC 1 cut(s) 323
BspANI GGCC 3 cut(s) 50, 248, 901
BspCNI CTCAG 4 cut(s) 214, 263, 571, 716
BspEI TCCGGA 1 cut(s) 240
BspFNI CGCG 1 cut(s) 328
BspMAI CTGCAG 1 cut(s) 39
BspPI GGATC 6 cut(s) 83, 89, 131, 201, 479, 701
BspTNI GGTCTC 1 cut(s) 1009
BsrI ACTGG 3 cut(s) 73, 185, 818
BssECI CCNNGG 2 cut(s) 283, 347
BssMI GATC 8 cut(s) 81, 88, 136, 193, 228, 484, 706, 736
BssSI CACGAG 1 cut(s) 338
BssT1I CCWWGG 1 cut(s) 283
Bst2BI CACGAG 1 cut(s) 338
Bst2UI CCWGG 2 cut(s) 272, 798
Bst4CI ACNGT 4 cut(s) 158, 163, 694, 955
BstC8I GCNNGC 2 cut(s) 219, 321
BstDEI CTNAG 7 cut(s) 222, 250, 534, 579, 616, 644, 703
BstDSI CCRYGG 1 cut(s) 283
BstF5I GGATG 2 cut(s) 393, 723
BstFNI CGCG 1 cut(s) 328
BstH2I RGCGCY 1 cut(s) 587
BstHHI GCGC 2 cut(s) 328, 586
BstKTI GATC 8 cut(s) 84, 91, 139, 196, 231, 487, 709, 739
BstMAI GTCTC 2 cut(s) 509, 1009
BstMBI GATC 8 cut(s) 81, 88, 136, 193, 228, 484, 706, 736
BstMCI CGRYCG 1 cut(s) 157
BstMWI GCNNNNNNNGC 2 cut(s) 37, 325
BstNI CCWGG 2 cut(s) 272, 798
BstNSI RCATGY 1 cut(s) 858
BstSCI CCNGG 5 cut(s) 8, 91, 270, 796, 1007
BstSFI CTRYAG 2 cut(s) 35, 370
BstUI CGCG 1 cut(s) 328
BstV1I GCAGC 3 cut(s) 49, 52, 330
BstV2I GAAGAC 1 cut(s) 1023
BstX2I RGATCY 3 cut(s) 136, 193, 706
BstYI RGATCY 3 cut(s) 136, 193, 706
BsuI GTATCC 1 cut(s) 282
BsuRI GGCC 3 cut(s) 50, 248, 901
BtgI CCRYGG 1 cut(s) 283
BtsCI GGATG 2 cut(s) 393, 723
BtsI GCAGTG 1 cut(s) 464
BtsIMutI CAGTG 5 cut(s) 192, 464, 690, 779, 960
Cac8I GCNNGC 2 cut(s) 219, 321
CaiI CAGNNNCTG 2 cut(s) 43, 710
CfoI GCGC 2 cut(s) 328, 586
Cfr13I GGNCC 3 cut(s) 246, 836, 899
CseI GACGC 1 cut(s) 20
Csp6I GTAC 7 cut(s) 159, 367, 400, 414, 529, 763, 811
CspCI CAANNNNNGTGG 2 cut(s) 755, 790
CviAII CATG 4 cut(s) 284, 418, 663, 855
CviQI GTAC 7 cut(s) 159, 367, 400, 414, 529, 763, 811
DdeI CTNAG 7 cut(s) 222, 250, 534, 579, 616, 644, 703
DpnI GATC 8 cut(s) 83, 90, 138, 195, 230, 486, 708, 738
DpnII GATC 8 cut(s) 81, 88, 136, 193, 228, 484, 706, 736
Ecl136II GAGCTC 1 cut(s) 803
Eco130I CCWWGG 1 cut(s) 283
Eco147I AGGCCT 1 cut(s) 50
Eco24I GRGCYC 2 cut(s) 594, 805
Eco31I GGTCTC 1 cut(s) 1009
Eco32I GATATC 1 cut(s) 622
Eco47I GGWCC 1 cut(s) 836
Eco53kI GAGCTC 1 cut(s) 803
Eco57I CTGAAG 1 cut(s) 65
EcoICRI GAGCTC 1 cut(s) 803
EcoO109I RGGNCCY 1 cut(s) 246
EcoRII CCWGG 2 cut(s) 270, 796
EcoRV GATATC 1 cut(s) 622
EcoT14I CCWWGG 1 cut(s) 283
EcoT38I GRGCYC 2 cut(s) 594, 805
ErhI CCWWGG 1 cut(s) 283
FaeI CATG 4 cut(s) 287, 421, 666, 858
FatI CATG 4 cut(s) 283, 417, 662, 854
FauNDI CATATG 1 cut(s) 636
Fnu4HI GCNGC 4 cut(s) 38, 41, 324, 344
FokI GGATG 2 cut(s) 400, 710
FriOI GRGCYC 2 cut(s) 594, 805
Fsp4HI GCNGC 4 cut(s) 38, 41, 324, 344
FspBI CTAG 5 cut(s) 408, 806, 875, 995, 1013
GlaI GCGC 2 cut(s) 327, 585
GluI GCNGC 4 cut(s) 38, 41, 324, 344
GsuI CTGGAG 1 cut(s) 819
HaeII RGCGCY 1 cut(s) 587
HaeIII GGCC 3 cut(s) 50, 248, 901
HapII CCGG 4 cut(s) 9, 93, 241, 1008
HgaI GACGC 1 cut(s) 20
HhaI GCGC 2 cut(s) 328, 586
Hin1II CATG 4 cut(s) 287, 421, 666, 858
Hin6I GCGC 2 cut(s) 326, 584
HinP1I GCGC 2 cut(s) 326, 584
HinfI GANTC 3 cut(s) 59, 96, 640
HpaII CCGG 4 cut(s) 9, 93, 241, 1008
HphI GGTGA 4 cut(s) 91, 102, 238, 596
Hpy166II GTNNAC 5 cut(s) 6, 280, 544, 749, 811
Hpy188I TCNGA 5 cut(s) 253, 580, 706, 866, 922
Hpy188III TCNNGA 7 cut(s) 241, 338, 491, 710, 734, 888, 944
Hpy8I GTNNAC 5 cut(s) 6, 280, 544, 749, 811
Hpy99I CGWCG 2 cut(s) 59, 149
HpyAV CCTTC 8 cut(s) 40, 61, 207, 352, 385, 439, 827, 879
HpyCH4III ACNGT 4 cut(s) 158, 163, 694, 955
HpyCH4IV ACGT 1 cut(s) 540
HpyCH4V TGCA 4 cut(s) 37, 319, 457, 510
HpyF10VI GCNNNNNNNGC 2 cut(s) 37, 325
HpyF3I CTNAG 7 cut(s) 222, 250, 534, 579, 616, 644, 703
HpySE526I ACGT 1 cut(s) 540
Hsp92II CATG 4 cut(s) 287, 421, 666, 858
HspAI GCGC 2 cut(s) 326, 584
Kpn2I TCCGGA 1 cut(s) 240
Kzo9I GATC 8 cut(s) 81, 88, 136, 193, 228, 484, 706, 736
LmnI GCTCC 1 cut(s) 800
Lsp1109I GCAGC 3 cut(s) 49, 52, 330
MaeI CTAG 5 cut(s) 408, 806, 875, 995, 1013
MaeII ACGT 1 cut(s) 540
MaeIII GTNAC 1 cut(s) 556
MalI GATC 8 cut(s) 83, 90, 138, 195, 230, 486, 708, 738
MboI GATC 8 cut(s) 81, 88, 136, 193, 228, 484, 706, 736
MboII GAAGA 4 cut(s) 259, 779, 935, 1028
MflI RGATCY 3 cut(s) 136, 193, 706
MhlI GDGCHC 2 cut(s) 594, 805
MluCI AATT 8 cut(s) 114, 495, 548, 569, 741, 843, 911, 936
MlyI GAGTC 1 cut(s) 53
MroI TCCGGA 1 cut(s) 240
MroXI GAANNNNTTC 1 cut(s) 50
MseI TTAA 1 cut(s) 914
MspA1I CMGCKG 1 cut(s) 43
MspI CCGG 4 cut(s) 9, 93, 241, 1008
MspR9I CCNGG 5 cut(s) 10, 93, 272, 798, 1009
MvaI CCWGG 2 cut(s) 272, 798
MvnI CGCG 1 cut(s) 328
MwoI GCNNNNNNNGC 2 cut(s) 37, 325
NciI CCSGG 3 cut(s) 10, 93, 1009
NcoI CCATGG 1 cut(s) 283
NdeI CATATG 1 cut(s) 636
NdeII GATC 8 cut(s) 81, 88, 136, 193, 228, 484, 706, 736
NlaIII CATG 4 cut(s) 287, 421, 666, 858
NmeAIII GCCGAG 1 cut(s) 372
NmuCI GTSAC 1 cut(s) 556
NspI RCATGY 1 cut(s) 858
PceI AGGCCT 1 cut(s) 50
PdmI GAANNNNTTC 1 cut(s) 50
PfeI GAWTC 2 cut(s) 96, 640
Pfl23II CGTACG 1 cut(s) 158
PflFI GACNNNGTC 1 cut(s) 236
PfoI TCCNGGA 1 cut(s) 91
PkrI GCNGC 4 cut(s) 39, 42, 325, 345
PleI GAGTC 1 cut(s) 53
PpsI GAGTC 1 cut(s) 53
Psp124BI GAGCTC 1 cut(s) 805
Psp6I CCWGG 2 cut(s) 270, 796
PspGI CCWGG 2 cut(s) 270, 796
PspLI CGTACG 1 cut(s) 158
PspPI GGNCC 3 cut(s) 246, 836, 899
PstI CTGCAG 1 cut(s) 39
PstNI CAGNNNCTG 2 cut(s) 43, 710
PsuI RGATCY 3 cut(s) 136, 193, 706
PsyI GACNNNGTC 1 cut(s) 236
PvuII CAGCTG 1 cut(s) 43
RsaI GTAC 7 cut(s) 160, 368, 401, 415, 530, 764, 812
RsaNI GTAC 7 cut(s) 159, 367, 400, 414, 529, 763, 811
SacI GAGCTC 1 cut(s) 805
SaqAI TTAA 1 cut(s) 914
SatI GCNGC 4 cut(s) 38, 41, 324, 344
Sau3AI GATC 8 cut(s) 81, 88, 136, 193, 228, 484, 706, 736
Sau96I GGNCC 3 cut(s) 246, 836, 899
ScaI AGTACT 3 cut(s) 368, 401, 530
SchI GAGTC 1 cut(s) 53
ScrFI CCNGG 5 cut(s) 10, 93, 272, 798, 1009
SduI GDGCHC 2 cut(s) 594, 805
SfcI CTRYAG 2 cut(s) 35, 370
SinI GGWCC 1 cut(s) 836
SmlI CTYRAG 2 cut(s) 489, 886
SmoI CTYRAG 2 cut(s) 489, 886
Sse9I AATT 8 cut(s) 114, 495, 548, 569, 741, 843, 911, 936
SseBI AGGCCT 1 cut(s) 50
SsiI CCGC 1 cut(s) 323
SspMI CTAG 5 cut(s) 408, 806, 875, 995, 1013
SstI GAGCTC 1 cut(s) 805
StuI AGGCCT 1 cut(s) 50
StyD4I CCNGG 5 cut(s) 8, 91, 270, 796, 1007
StyI CCWWGG 1 cut(s) 283
TaaI ACNGT 4 cut(s) 158, 163, 694, 955
TaiI ACGT 1 cut(s) 543
TaqI TCGA 3 cut(s) 54, 231, 696
TasI AATT 8 cut(s) 114, 495, 548, 569, 741, 843, 911, 936
TatI WGTACW 4 cut(s) 366, 399, 528, 810
TauI GCSGC 1 cut(s) 326
TfiI GAWTC 2 cut(s) 96, 640
Tru1I TTAA 1 cut(s) 914
Tru9I TTAA 1 cut(s) 914
TscAI CASTG 5 cut(s) 192, 464, 697, 779, 960
TseFI GTSAC 1 cut(s) 556
TseI GCWGC 3 cut(s) 37, 40, 343
Tsp45I GTSAC 1 cut(s) 556
TspDTI ATGAA 3 cut(s) 166, 404, 846
TspGWI ACGGA 3 cut(s) 113, 133, 225
TspRI CASTG 5 cut(s) 192, 464, 697, 779, 960
Tth111I GACNNNGTC 1 cut(s) 236
VpaK11BI GGWCC 1 cut(s) 836
XapI RAATTY 3 cut(s) 495, 569, 843
XceI RCATGY 1 cut(s) 858
XcmI CCANNNNNNNNNTGG 1 cut(s) 301
XmnI GAANNNNTTC 1 cut(s) 50
XspI CTAG 5 cut(s) 408, 806, 875, 995, 1013
ZrmI AGTACT 3 cut(s) 368, 401, 530
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.