Rh4DG038700

Belongs to the iron ascorbate-dependent oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
OG0000054
Physical Location & Seq
Forward (+)
6314647 .. 6317417
2771 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG038700.1

Sequence Viewer

Length: 1095 bp
ATGAATATGGTCACCGGGAAATCAAGCGACCCAGAGCGTCTGCAGCAGCTGAAGGCCTTCGACGACTCCAAAGCTGGTGTCAAAGGCATCGTCGATGCCGGAATCACCAAACTCCCACCAATTTTCGTCCGTCCAAAGAAAGATCCCTCCGTCGTCGGCGACCGTACGGTTTCAGGTCATTTCAGTATCCCAGTAGTGGATCTGGCTGAATATAACGGAAGGCGTGCTGAGGTGATCGACCAAGTCCGGAGGGCAGCAGAGAGCTTTGGGTTCTTCCAGGTGGTGAACCATGGGATGCCCGAGAGAGTGATGGAGGAGATGATGGAGGCGGCGCGTGTGTTTCACGAGCTGCCGAGGGAGGAGAAGGCGGAGTACTATGGTAGGGAGATGGGGATGAAGGTCAAGTACTTCTCTGGCAGTACCATGTATAAGTTGATGTTTGCTGATTGGAAGGACACTTTGCAGTGTAACATAAGTGACGAGCTGTTTGATCCTCAAGAAATTCCTCTCGTTTGCAGAGATATAACTATGGAGTACTCTAAGCACATTCACAAGTTAGGTGTCACCTTATTTGAATTTCTATCTGAGGCGCTTAGGCTCAAACCTGATCACCTCAAAAACTTGGATAGCACAATGGGGCATATGGTTCTTAGTCATTACTATCCACCATGCCCCGAGCCTGAAGTGACTATTGGCACTGTCGAACACTCAGATCCTGATTTTATGACCATCCTACTTCAAGACCAAATCGGTGGACTTCAGGTTTTGTACCAAAATCAGTGGATTGATGTTCCTCCTGTACCTGGAGCTCTAGTGGTGAATATCGGAGATTTCTTGCAGCTGATCTCAAACAATAAGTTCATAAGCGTTAATCACAGAGTATTGGCAAAAAATGAAGGTCCAAGAATTTCCGTGGCATGTTTTTTTAGACCTTCACTAGAAAACTCCTCAAGATTATATGGACCAATCAAAGAATTAACATCAGAAGAAAAACCTTCAGTTTATCAGGAAACAACAGTGAAGGATTATGTTATGTGCCACTACAAGAGTTGGGAACTAAATGGGGTCTCCGGGCTAGAAGACTTGAAGCTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2OG-FeII_Oxy DIOX_N

Protein Analysis

364

Amino Acids

41.35

Weight (kDa)

5.53

Isoelectric Point (pI)

40.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 63 - 165 5.5e-21 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 214 - 311 1.9e-33 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000054)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03400 AT1G03400 AT1G03410 AT1G03410 AT1G04350 AT1G06620 AT1G06620 AT1G06640 AT1G06640 AT1G06640 AT1G06645 AT1G06650 AT1G06650 AT2G25450 AT2G30830 AT2G30840 AT2G30840 AT2G30840 AT3G61400 AT3G61400 AT5G43440 AT5G43440 AT5G43450 AT5G43450 AT5G59530 AT5G59540 AT5G59540
fragaria_vesca FvH4_2g03190 FvH4_2g03220 FvH4_3g07861 FvH4_3g31880 FvH4_3g31880 FvH4_3g31880 FvH4_4g03241 FvH4_4g03250 FvH4_4g03251 FvH4_4g03260 FvH4_4g03300 FvH4_4g03301 FvH4_4g03301 FvH4_4g03301 FvH4_4g03302 FvH4_4g03303 FvH4_4g03303 FvH4_4g03304 FvH4_4g03305 FvH4_4g03323 FvH4_4g03323 FvH4_5g19290 FvH4_5g19290 FvH4_5g19290 FvH4_5g19291 FvH4_5g19291 FvH4_5g19310 FvH4_5g19310 FvH4_5g19310 FvH4_5g19320 FvH4_5g19321 FvH4_5g19321 FvH4_5g19321 FvH4_7g31470
malus_domestica MD00G1220300.v1.1 MD02G1050800.v1.1 MD02G1053200.v1.1 MD02G1053300.v1.1 MD02G1054900.v1.1 MD03G1032300.v1.1 MD03G1245000.v1.1 MD03G1245300.v1.1 MD05G1014200.v1.1 MD13G1210900.v1.1 MD13G1211000.v1.1 MD13G1211100.v1.1 MD13G1211200.v1.1 MD13G1211800.v1.1 MD13G1211900.v1.1 MD13G1212000.v1.1 MD16G1214100.v1.1 MD16G1214300.v1.1 MD16G1214400.v1.1 MD16G1214600.v1.1 MD16G1215000.v1.1 MD16G1215200.v1.1 MD16G1215300.v1.1 MD16G1215500.v1.1 MD16G1271000.v1.1
prunus_persica Prupe.1G035500_v2.0.a1 Prupe.1G035700_v2.0.a1 Prupe.1G035800_v2.0.a1 Prupe.1G035900_v2.0.a1 Prupe.1G036000_v2.0.a1 Prupe.1G036100_v2.0.a1 Prupe.1G036200_v2.0.a1 Prupe.1G036400_v2.0.a1 Prupe.1G036500_v2.0.a1 Prupe.1G036600_v2.0.a1 Prupe.1G036700_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G191000_v2.0.a1 Prupe.1G191100_v2.0.a1
pyrus_communis pycom13g18340 pycom13g18350 pycom13g18380 pycom16g17990 pycom16g18010 pycom16g18020
rosa_chinensis RchiOBHm_Chr2g0124051 RchiOBHm_Chr4g0391811 RchiOBHm_Chr4g0391931 RchiOBHm_Chr4g0391961 RchiOBHm_Chr4g0391971 RchiOBHm_Chr4g0391981 RchiOBHm_Chr4g0391991 RchiOBHm_Chr4g0392031 RchiOBHm_Chr4g0392051 RchiOBHm_Chr4g0392061 RchiOBHm_Chr4g0392071 RchiOBHm_Chr4g0392081 RchiOBHm_Chr4g0392091 RchiOBHm_Chr4g0392111 RchiOBHm_Chr4g0392121 RchiOBHm_Chr4g0392131 RchiOBHm_Chr4g0392141 RchiOBHm_Chr4g0392151 RchiOBHm_Chr4g0392211 RchiOBHm_Chr4g0392251 RchiOBHm_Chr4g0392261 RchiOBHm_Chr4g0392301 RchiOBHm_Chr4g0392311 RchiOBHm_Chr4g0392341 RchiOBHm_Chr4g0409221 RchiOBHm_Chr4g0410991 RchiOBHm_Chr4g0429131 RchiOBHm_Chr4g0437051 RchiOBHm_Chr5g0038681 RchiOBHm_Chr5g0047071 RchiOBHm_Chr5g0058651 RchiOBHm_Chr6g0248121 RchiOBHm_Chr6g0248141 RchiOBHm_Chr6g0248291 RchiOBHm_Chr6g0248341 RchiOBHm_Chr6g0248351
rosa_laevigata RLG00000006473 RLG00000006475 RLG00000006667 RLG00000007095 RLG00000009819 RLG00000009820 RLG00000009821 RLG00000009822 RLG00000009825 RLG00000009826 RLG00000009830 RLG00000009831 RLG00000009832 RLG00000009833 RLG00000009834 RLG00000009835 RLG00000009837 RLG00000009838 RLG00000009839 RLG00000009841 RLG00000009842 RLG00000009844 RLG00000009845 RLG00000009846 RLG00000009847 RLG00000009848 RLG00000009849 RLG00000015160 RLG00000015161 RLG00000017791 RLG00000018779 RLG00000034461 RLG00000035237
rosa_multiflora Rmu_co8253791.1_g000001 Rmu_co8348827.1_g000001 Rmu_co8400489.1_g000001 Rmu_sc0000383.1_g000003 Rmu_sc0000383.1_g000005 Rmu_sc0000383.1_g000026 Rmu_sc0000846.1_g000012 Rmu_sc0001231.1_g000013 Rmu_sc0001231.1_g000026 Rmu_sc0001231.1_g000028 Rmu_sc0001800.1_g000027 Rmu_sc0003436.1_g000022 Rmu_sc0004104.1_g000004 Rmu_sc0004295.1_g000021 Rmu_sc0004295.1_g000031 Rmu_sc0004928.1_g000002 Rmu_sc0004928.1_g000008 Rmu_sc0004928.1_g000011 Rmu_sc0004928.1_g000027 Rmu_sc0004977.1_g000007 Rmu_sc0005018.1_g000002 Rmu_sc0005091.1_g000026 Rmu_sc0005091.1_g000032 Rmu_sc0005091.1_g000033 Rmu_sc0005817.1_g000003 Rmu_sc0005817.1_g000008 Rmu_sc0012482.1_g000002 Rmu_sc0014210.1_g000001 Rmu_sc0016150.1_g000001 Rmu_sc0029701.1_g000002 Rmu_sc0036585.1_g000001 Rmu_sc0037489.1_g000002
rosa_roxburghii Rroxscaffold_1G00021790 Rroxscaffold_1G00021800 Rroxscaffold_1G00034360 Rroxscaffold_2G00120130 Rroxscaffold_5G00337210 Rroxscaffold_5G00337220 Rroxscaffold_5G00337230 Rroxscaffold_5G00337250 Rroxscaffold_5G00337260 Rroxscaffold_5G00337270 Rroxscaffold_5G00337300 Rroxscaffold_5G00337310 Rroxscaffold_5G00337320 Rroxscaffold_5G00337330 Rroxscaffold_5G00337350 Rroxscaffold_5G00337370 Rroxscaffold_5G00337390 Rroxscaffold_5G00337400 Rroxscaffold_5G00337420 Rroxscaffold_5G00337430 Rroxscaffold_5G00337450 Rroxscaffold_5G00337470 Rroxscaffold_5G00337480 Rroxscaffold_5G00337520 Rroxscaffold_5G00378130 Rroxscaffold_6G00397800 Rroxscaffold_7G00213320 Rroxscaffold_7G00213390 Rroxscaffold_7G00213420 Rroxscaffold_7G00213470
rosa_rugosa Rorug02G0070100 Rorug02G0070100 Rorug02G0070100 Rorug02G0128600 Rorug02G0128700 Rorug02G0128800 Rorug02G0128900 Rorug02G0248400 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337100 Rorug03G0337200 Rorug03G0337300 Rorug03G0337600 Rorug03G0337700 Rorug03G0337800 Rorug03G0337900 Rorug03G0337900 Rorug03G0338000 Rorug03G0338100 Rorug03G0338200 Rorug04G0233200.1 Rorug04G0297900 Rorug05G0233700 Rorug05G0316700 Rorug05G0530800 Rorug05G0530900
rosa_samantha Rh2AG307400 Rh2BG316500 Rh2DG331200 Rh4AG039300 Rh4AG039400 Rh4AG039600 Rh4AG039700 Rh4AG039900 Rh4AG040000 Rh4AG040100 Rh4AG040300 Rh4AG040500 Rh4AG040700 Rh4AG041000 Rh4AG041100 Rh4AG041600 Rh4AG041800 Rh4AG041900 Rh4AG352400 Rh4BG033200 Rh4BG034100 Rh4BG034300 Rh4BG034700 Rh4BG034800 Rh4BG035200 Rh4BG035400 Rh4BG036000 Rh4BG036200 Rh4BG036300 Rh4BG036500 Rh4BG036800 Rh4BG361700 Rh4CG042000 Rh4CG042200 Rh4CG042300 Rh4CG042500 Rh4CG042600 Rh4CG042800 Rh4CG043200 Rh4CG043400 Rh4CG043500 Rh4CG043700 Rh4CG043800 Rh4CG044200 Rh4CG044500 Rh4CG044700 Rh4CG177000 Rh4CG310600 Rh4CG376000 Rh4DG036300 Rh4DG036900 Rh4DG037000 Rh4DG037100 Rh4DG037200 Rh4DG037300 Rh4DG037500 Rh4DG037700 Rh4DG037800 Rh4DG037900 Rh4DG038000 Rh4DG038200 Rh4DG038500 Rh4DG038700 Rh4DG038900 Rh4DG159600 Rh5CG347900 Rh5DG409900 Rh6AG045300 Rh6AG045800 Rh6AG046000 Rh6AG046100 Rh6BG040600 Rh6BG040700 Rh6BG042200 Rh6BG042700 Rh6BG042800 Rh6DG035900 Rh6DG036100 Rh6DG036200
rosa_wichuraiana Rw0G010420 Rw2G024780 Rw4G003020 Rw4G003070 Rw4G003080 Rw4G003090 Rw4G003100 Rw4G003130 Rw4G003140 Rw4G003150 Rw4G003180 Rw4G003190 Rw4G003200 Rw4G003210 Rw4G003220 Rw4G003240 Rw4G003270 Rw4G025050 Rw4G030850 Rw6G003930 Rw6G004000 Rw6G004030 Rw6G004040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 334
AccIII TCCGGA 1 cut(s) 246
AciI CCGC 2 cut(s) 329, 368
AclWI GGATC 4 cut(s) 137, 207, 485, 707
AcsI RAATTY 3 cut(s) 501, 575, 906
AcuI CTGAAG 4 cut(s) 71, 702, 743, 981
AfaI GTAC 7 cut(s) 166, 374, 407, 421, 536, 770, 801
AfiI CCNNNNNNNGG 2 cut(s) 196, 803
AgsI TTSAA 3 cut(s) 575, 740, 1087
AjnI CCWGG 2 cut(s) 276, 802
AjuI GAANNNNNNNTTGG 2 cut(s) 675, 707
AluBI AGCT 8 cut(s) 49, 74, 264, 349, 484, 809, 841, 1090
AluI AGCT 8 cut(s) 49, 74, 264, 349, 484, 809, 841, 1090
Alw21I GWGCWC 1 cut(s) 811
Alw26I GTCTC 1 cut(s) 1072
AlwI GGATC 4 cut(s) 137, 207, 485, 707
AlwNI CAGNNNCTG 2 cut(s) 49, 716
Ama87I CYCGRG 2 cut(s) 299, 674
Aor13HI TCCGGA 1 cut(s) 246
AoxI GGCC 1 cut(s) 54
ApeKI GCWGC 5 cut(s) 43, 46, 254, 349, 838
ApoI RAATTY 3 cut(s) 501, 575, 906
ArsI GACNNNNNNTTYG 6 cut(s) 63, 75, 95, 107, 470, 502
Asp700I GAANNNNTTC 1 cut(s) 56
AspLEI GCGC 2 cut(s) 334, 592
AspS9I GGNCC 2 cut(s) 899, 962
AsuC2I CCSGG 2 cut(s) 16, 1072
AsuHPI GGTGA 7 cut(s) 4, 97, 244, 295, 556, 602, 829
AvaI CYCGRG 2 cut(s) 299, 674
AvaII GGWCC 2 cut(s) 899, 962
BanII GRGCYC 1 cut(s) 811
BarI GAAGNNNNNNTAC 4 cut(s) 356, 388, 389, 421
BauI CACGAG 1 cut(s) 344
BbsI GAAGAC 1 cut(s) 1086
Bbv12I GWGCWC 1 cut(s) 811
BbvCI CCTCAGC 1 cut(s) 228
BbvI GCAGC 5 cut(s) 55, 58, 266, 336, 850
BccI CCATC 4 cut(s) 304, 316, 382, 737
BciT130I CCWGG 2 cut(s) 278, 804
BciVI GTATCC 1 cut(s) 197
BclI TGATCA 1 cut(s) 607
BcnI CCSGG 2 cut(s) 16, 1072
BcoDI GTCTC 1 cut(s) 1072
BfaI CTAG 3 cut(s) 812, 938, 1076
BfmI CTRYAG 2 cut(s) 41, 1091
BfoI RGCGCY 1 cut(s) 593
BfuI GTATCC 1 cut(s) 197
BisI GCNGC 6 cut(s) 44, 47, 255, 330, 350, 839
BlsI GCNGC 6 cut(s) 45, 48, 256, 331, 351, 840
BmcAI AGTACT 3 cut(s) 374, 407, 536
Bme1390I CCNGG 4 cut(s) 16, 278, 804, 1072
Bme18I GGWCC 2 cut(s) 899, 962
BmeT110I CYCGRG 2 cut(s) 299, 674
BmgT120I GGNCC 2 cut(s) 899, 962
BmrFI CCNGG 4 cut(s) 16, 278, 804, 1072
BmrI ACTGGG 1 cut(s) 185
BmsI GCATC 3 cut(s) 85, 96, 285
BmuI ACTGGG 1 cut(s) 185
BpiI GAAGAC 1 cut(s) 1086
BpmI CTGGAG 1 cut(s) 825
Bpu10I CCTNAGC 2 cut(s) 228, 593
BpuEI CTTGAG 2 cut(s) 480, 934
BpuMI CCSGG 2 cut(s) 16, 1072
BsaI GGTCTC 1 cut(s) 1072
BsaJI CCNNGG 3 cut(s) 289, 353, 912
BsaWI WCCGGW 1 cut(s) 246
BsaXI ACNNNNNCTCC 2 cut(s) 798, 828
Bsc4I CCNNNNNNNGG 2 cut(s) 196, 803
Bse1I ACTGG 1 cut(s) 191
BseAI TCCGGA 1 cut(s) 246
BseBI CCWGG 2 cut(s) 278, 804
BseDI CCNNGG 3 cut(s) 289, 353, 912
BseGI GGATG 3 cut(s) 300, 399, 729
BseLI CCNNNNNNNGG 2 cut(s) 196, 803
BseMII CTCAG 3 cut(s) 219, 576, 723
BseNI ACTGG 1 cut(s) 191
BseRI GAGGAG 3 cut(s) 329, 374, 937
BseXI GCAGC 5 cut(s) 55, 58, 266, 336, 850
Bsh1236I CGCG 1 cut(s) 334
Bsh1285I CGRYCG 1 cut(s) 163
BshFI GGCC 1 cut(s) 56
BsiEI CGRYCG 1 cut(s) 163
BsiHKAI GWGCWC 1 cut(s) 811
BsiHKCI CYCGRG 2 cut(s) 299, 674
BsiSI CCGG 4 cut(s) 15, 99, 247, 1071
BsiWI CGTACG 1 cut(s) 164
BslI CCNNNNNNNGG 2 cut(s) 196, 803
BsmAI GTCTC 1 cut(s) 1072
BsnI GGCC 1 cut(s) 56
Bso31I GGTCTC 1 cut(s) 1072
BsoBI CYCGRG 2 cut(s) 299, 674
Bsp1286I GDGCHC 1 cut(s) 811
Bsp13I TCCGGA 1 cut(s) 246
Bsp143I GATC 7 cut(s) 142, 199, 234, 490, 607, 712, 843
Bsp19I CCATGG 1 cut(s) 289
BspACI CCGC 2 cut(s) 329, 368
BspANI GGCC 1 cut(s) 56
BspCNI CTCAG 3 cut(s) 220, 577, 722
BspEI TCCGGA 1 cut(s) 246
BspFNI CGCG 1 cut(s) 334
BspMAI CTGCAG 1 cut(s) 45
BspPI GGATC 4 cut(s) 137, 207, 485, 707
BspTNI GGTCTC 1 cut(s) 1072
BsrI ACTGG 1 cut(s) 191
BssECI CCNNGG 3 cut(s) 289, 353, 912
BssMI GATC 7 cut(s) 142, 199, 234, 490, 607, 712, 843
BssSI CACGAG 1 cut(s) 344
BssT1I CCWWGG 1 cut(s) 289
Bst2BI CACGAG 1 cut(s) 344
Bst2UI CCWGG 2 cut(s) 278, 804
Bst4CI ACNGT 4 cut(s) 164, 169, 700, 1018
BstC8I GCNNGC 1 cut(s) 225
BstDEI CTNAG 6 cut(s) 228, 540, 585, 593, 650, 709
BstDSI CCRYGG 2 cut(s) 289, 912
BstEII GGTNACC 1 cut(s) 10
BstF5I GGATG 3 cut(s) 300, 399, 729
BstFNI CGCG 1 cut(s) 334
BstH2I RGCGCY 1 cut(s) 593
BstHHI GCGC 2 cut(s) 334, 592
BstKTI GATC 7 cut(s) 145, 202, 237, 493, 610, 715, 846
BstMAI GTCTC 1 cut(s) 1072
BstMBI GATC 7 cut(s) 142, 199, 234, 490, 607, 712, 843
BstMCI CGRYCG 1 cut(s) 163
BstMWI GCNNNNNNNGC 1 cut(s) 43
BstNI CCWGG 2 cut(s) 278, 804
BstNSI RCATGY 1 cut(s) 921
BstPI GGTNACC 1 cut(s) 10
BstSCI CCNGG 4 cut(s) 14, 276, 802, 1070
BstSFI CTRYAG 2 cut(s) 41, 1091
BstUI CGCG 1 cut(s) 334
BstV1I GCAGC 5 cut(s) 55, 58, 266, 336, 850
BstV2I GAAGAC 1 cut(s) 1086
BstX2I RGATCY 3 cut(s) 142, 199, 712
BstXI CCANNNNNNTGG 1 cut(s) 752
BstYI RGATCY 3 cut(s) 142, 199, 712
BsuI GTATCC 1 cut(s) 197
BsuRI GGCC 1 cut(s) 56
BtgI CCRYGG 2 cut(s) 289, 912
BtsCI GGATG 3 cut(s) 300, 399, 729
BtsI GCAGTG 1 cut(s) 470
BtsIMutI CAGTG 4 cut(s) 470, 696, 785, 1023
Cac8I GCNNGC 1 cut(s) 225
CaiI CAGNNNCTG 2 cut(s) 49, 716
CfoI GCGC 2 cut(s) 334, 592
Cfr13I GGNCC 2 cut(s) 899, 962
CseI GACGC 1 cut(s) 26
Csp6I GTAC 7 cut(s) 165, 373, 406, 420, 535, 769, 800
CspCI CAANNNNNGTGG 2 cut(s) 761, 796
CviAII CATG 4 cut(s) 290, 424, 669, 918
CviQI GTAC 7 cut(s) 165, 373, 406, 420, 535, 769, 800
DdeI CTNAG 6 cut(s) 228, 540, 585, 593, 650, 709
DpnI GATC 7 cut(s) 144, 201, 236, 492, 609, 714, 845
DpnII GATC 7 cut(s) 142, 199, 234, 490, 607, 712, 843
EciI GGCGGA 1 cut(s) 383
Ecl136II GAGCTC 1 cut(s) 809
Eco130I CCWWGG 1 cut(s) 289
Eco147I AGGCCT 1 cut(s) 56
Eco24I GRGCYC 1 cut(s) 811
Eco31I GGTCTC 1 cut(s) 1072
Eco47I GGWCC 2 cut(s) 899, 962
Eco53kI GAGCTC 1 cut(s) 809
Eco57I CTGAAG 4 cut(s) 71, 702, 743, 981
Eco88I CYCGRG 2 cut(s) 299, 674
Eco91I GGTNACC 1 cut(s) 10
EcoICRI GAGCTC 1 cut(s) 809
EcoO65I GGTNACC 1 cut(s) 10
EcoRII CCWGG 2 cut(s) 276, 802
EcoT14I CCWWGG 1 cut(s) 289
EcoT38I GRGCYC 1 cut(s) 811
ErhI CCWWGG 1 cut(s) 289
FaeI CATG 4 cut(s) 293, 427, 672, 921
FatI CATG 4 cut(s) 289, 423, 668, 917
FauNDI CATATG 1 cut(s) 642
FbaI TGATCA 1 cut(s) 607
Fnu4HI GCNGC 6 cut(s) 44, 47, 255, 330, 350, 839
FokI GGATG 3 cut(s) 307, 406, 716
FriOI GRGCYC 1 cut(s) 811
Fsp4HI GCNGC 6 cut(s) 44, 47, 255, 330, 350, 839
FspBI CTAG 3 cut(s) 812, 938, 1076
GlaI GCGC 2 cut(s) 333, 591
GluI GCNGC 6 cut(s) 44, 47, 255, 330, 350, 839
GsuI CTGGAG 1 cut(s) 825
HaeII RGCGCY 1 cut(s) 593
HaeIII GGCC 1 cut(s) 56
HapII CCGG 4 cut(s) 15, 99, 247, 1071
HgaI GACGC 1 cut(s) 26
HhaI GCGC 2 cut(s) 334, 592
Hin1II CATG 4 cut(s) 293, 427, 672, 921
Hin6I GCGC 2 cut(s) 332, 590
HinP1I GCGC 2 cut(s) 332, 590
HinfI GANTC 2 cut(s) 65, 102
HpaII CCGG 4 cut(s) 15, 99, 247, 1071
HphI GGTGA 7 cut(s) 4, 97, 244, 295, 556, 602, 829
Hpy166II GTNNAC 2 cut(s) 286, 755
Hpy188I TCNGA 4 cut(s) 586, 712, 827, 985
Hpy188III TCNNGA 7 cut(s) 247, 344, 497, 716, 740, 951, 1007
Hpy8I GTNNAC 2 cut(s) 286, 755
Hpy99I CGWCG 4 cut(s) 65, 95, 155, 158
HpyCH4III ACNGT 4 cut(s) 164, 169, 700, 1018
HpyCH4V TGCA 4 cut(s) 43, 463, 516, 838
HpyF10VI GCNNNNNNNGC 1 cut(s) 43
HpyF3I CTNAG 6 cut(s) 228, 540, 585, 593, 650, 709
Hsp92II CATG 4 cut(s) 293, 427, 672, 921
HspAI GCGC 2 cut(s) 332, 590
Kpn2I TCCGGA 1 cut(s) 246
Ksp22I TGATCA 1 cut(s) 607
Kzo9I GATC 7 cut(s) 142, 199, 234, 490, 607, 712, 843
LmnI GCTCC 1 cut(s) 806
Lsp1109I GCAGC 5 cut(s) 55, 58, 266, 336, 850
LweI GCATC 3 cut(s) 85, 96, 285
MaeI CTAG 3 cut(s) 812, 938, 1076
MaeIII GTNAC 5 cut(s) 10, 467, 476, 562, 685
MalI GATC 7 cut(s) 144, 201, 236, 492, 609, 714, 845
MboI GATC 7 cut(s) 142, 199, 234, 490, 607, 712, 843
MboII GAAGA 3 cut(s) 265, 998, 1091
MflI RGATCY 3 cut(s) 142, 199, 712
MhlI GDGCHC 1 cut(s) 811
MluCI AATT 5 cut(s) 120, 501, 575, 906, 974
MlyI GAGTC 1 cut(s) 59
MroI TCCGGA 1 cut(s) 246
MroXI GAANNNNTTC 1 cut(s) 56
MseI TTAA 2 cut(s) 870, 977
MspA1I CMGCKG 2 cut(s) 49, 841
MspI CCGG 4 cut(s) 15, 99, 247, 1071
MspR9I CCNGG 4 cut(s) 16, 278, 804, 1072
MvaI CCWGG 2 cut(s) 278, 804
MvnI CGCG 1 cut(s) 334
MwoI GCNNNNNNNGC 1 cut(s) 43
NciI CCSGG 2 cut(s) 16, 1072
NcoI CCATGG 1 cut(s) 289
NdeI CATATG 1 cut(s) 642
NdeII GATC 7 cut(s) 142, 199, 234, 490, 607, 712, 843
NlaIII CATG 4 cut(s) 293, 427, 672, 921
NmeAIII GCCGAG 1 cut(s) 378
NmuCI GTSAC 4 cut(s) 10, 476, 562, 685
NspI RCATGY 1 cut(s) 921
PceI AGGCCT 1 cut(s) 56
PdmI GAANNNNTTC 1 cut(s) 56
PfeI GAWTC 1 cut(s) 102
Pfl23II CGTACG 1 cut(s) 164
PflFI GACNNNGTC 1 cut(s) 242
PkrI GCNGC 6 cut(s) 45, 48, 256, 331, 351, 840
PleI GAGTC 1 cut(s) 59
PpsI GAGTC 1 cut(s) 59
Psp124BI GAGCTC 1 cut(s) 811
Psp6I CCWGG 2 cut(s) 276, 802
PspEI GGTNACC 1 cut(s) 10
PspGI CCWGG 2 cut(s) 276, 802
PspLI CGTACG 1 cut(s) 164
PspPI GGNCC 2 cut(s) 899, 962
PstI CTGCAG 1 cut(s) 45
PstNI CAGNNNCTG 2 cut(s) 49, 716
PsuI RGATCY 3 cut(s) 142, 199, 712
PsyI GACNNNGTC 1 cut(s) 242
PvuII CAGCTG 2 cut(s) 49, 841
RsaI GTAC 7 cut(s) 166, 374, 407, 421, 536, 770, 801
RsaNI GTAC 7 cut(s) 165, 373, 406, 420, 535, 769, 800
SacI GAGCTC 1 cut(s) 811
SaqAI TTAA 2 cut(s) 870, 977
SatI GCNGC 6 cut(s) 44, 47, 255, 330, 350, 839
Sau3AI GATC 7 cut(s) 142, 199, 234, 490, 607, 712, 843
Sau96I GGNCC 2 cut(s) 899, 962
ScaI AGTACT 3 cut(s) 374, 407, 536
SchI GAGTC 1 cut(s) 59
ScrFI CCNGG 4 cut(s) 16, 278, 804, 1072
SduI GDGCHC 1 cut(s) 811
SfaNI GCATC 3 cut(s) 85, 96, 285
SfcI CTRYAG 2 cut(s) 41, 1091
SinI GGWCC 2 cut(s) 899, 962
SmlI CTYRAG 2 cut(s) 495, 949
SmoI CTYRAG 2 cut(s) 495, 949
Sse9I AATT 5 cut(s) 120, 501, 575, 906, 974
SseBI AGGCCT 1 cut(s) 56
SsiI CCGC 2 cut(s) 329, 368
SspMI CTAG 3 cut(s) 812, 938, 1076
SstI GAGCTC 1 cut(s) 811
StuI AGGCCT 1 cut(s) 56
StyD4I CCNGG 4 cut(s) 14, 276, 802, 1070
StyI CCWWGG 1 cut(s) 289
TaaI ACNGT 4 cut(s) 164, 169, 700, 1018
TaqI TCGA 4 cut(s) 60, 93, 237, 702
TasI AATT 5 cut(s) 120, 501, 575, 906, 974
TatI WGTACW 3 cut(s) 372, 405, 534
TauI GCSGC 1 cut(s) 332
TfiI GAWTC 1 cut(s) 102
Tru1I TTAA 2 cut(s) 870, 977
Tru9I TTAA 2 cut(s) 870, 977
TscAI CASTG 4 cut(s) 470, 703, 785, 1023
TseFI GTSAC 4 cut(s) 10, 476, 562, 685
TseI GCWGC 5 cut(s) 43, 46, 254, 349, 838
Tsp45I GTSAC 4 cut(s) 10, 476, 562, 685
TspDTI ATGAA 4 cut(s) 17, 410, 850, 909
TspGWI ACGGA 4 cut(s) 119, 139, 231, 901
TspRI CASTG 4 cut(s) 470, 703, 785, 1023
Tth111I GACNNNGTC 1 cut(s) 242
VpaK11BI GGWCC 2 cut(s) 899, 962
XapI RAATTY 3 cut(s) 501, 575, 906
XceI RCATGY 1 cut(s) 921
XmnI GAANNNNTTC 1 cut(s) 56
XspI CTAG 3 cut(s) 812, 938, 1076
ZrmI AGTACT 3 cut(s) 374, 407, 536
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.