MD16G1214100.v1.1

Belongs to the iron ascorbate-dependent oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
OG0000054
Physical Location & Seq
Forward (+)
20604752 .. 20606812
2061 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1214100.v1.1.491

Sequence Viewer

Length: 1092 bp
ATGGTAGCGACCAACACAAATTACGACCGAAAAAGTGAAGTAAAAGCTTTTGATGACACAAAAGAAGGAGTTAAAGGCCTCGTTGATGCGGGCATAACGGAAGTTCCTCGAATTTTTCATCACCCGCTAGAGGAGTCGGAAACCAGCTCCGATTCAGAAGCCAGCCAGTTTAGCATAGCGGTCATAGATCTTCAAGGCCTTGAACTCGGTAGTCTAACTAAGCGCAAGGAGATTGTTGCAAAAGTCGCAGAGGCATCGGAGACTTGGGGCTTTTTTCAGATTGCAAATCATGGAATACCGGTAGATGTTTTGGAGGAGATGAAAAATGGGGCACGTGGGTTTTTTGAGCAAGACACTCAAGTGAAGAAGGAGCTTTATACTCGTGAACACTCCAGACCTTTGGTCTACAATAGCAATTTTGATCTGTATAGTGCACCGGCTACTAGTTGGAGGGATAGTTTTGGGTGTTACATGGCTCCTAATCCTCCTAAGCCGGAAGAATTGCCAGAAGTATGCAGAGACATACTGGTTGAATATTCGAAGCAAGTAATGAAGTTGGGGAAGTTGCTGTTGCAGTTGTTGTCGGAGGCTCTTGGCCTAAAGCCAAGTCACTTAAATGACATAGATTGTAGTGAGGGGCTTGTGCTTCTAAGCCATTACTATCCTGCTTGTCCACAGCCGGAATTGACTCTGGGAACCACCAAGCACGGTGACTTCAGCTTCCTCACGATACTTCTACAAGATCATATTGGTGGTCTCCAAGTTCTTCCTCAGAACAAGTGGATTAATGTTCCTCCTGTGCCCGGAGCTCTTGTGGTTAATATTGGAGATCTTCTGCAGCTAATATCAAATGACAGATTCAAGAGCGTACAACATAGGGTACTGGCAAACCGTGTAGGTCCAAGAGTATCCATTGCAAGCCTCTTTTACACCGGCATGTTACCGTCAACAAAACTCTATGGACCGATCAAGGAGCTATTATCAGAAGACAATCCTCCAAAGTATAGGGAGACTACTGTAAGGGACTACGTTCTTTACGTCCATAACAAAGGCCTTGATGGCTCATCTGCCTTGTCTCAGTTCAAGCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2OG-FeII_Oxy DIOX_N

Protein Analysis

364

Amino Acids

40.47

Weight (kDa)

5.63

Isoelectric Point (pI)

40.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 59 - 164 2.2e-18 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 215 - 308 1.2e-32 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000054)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03400 AT1G03400 AT1G03410 AT1G03410 AT1G04350 AT1G06620 AT1G06620 AT1G06640 AT1G06640 AT1G06640 AT1G06645 AT1G06650 AT1G06650 AT2G25450 AT2G30830 AT2G30840 AT2G30840 AT2G30840 AT3G61400 AT3G61400 AT5G43440 AT5G43440 AT5G43450 AT5G43450 AT5G59530 AT5G59540 AT5G59540
fragaria_vesca FvH4_2g03190 FvH4_2g03220 FvH4_3g07861 FvH4_3g31880 FvH4_3g31880 FvH4_3g31880 FvH4_4g03241 FvH4_4g03250 FvH4_4g03251 FvH4_4g03260 FvH4_4g03300 FvH4_4g03301 FvH4_4g03301 FvH4_4g03301 FvH4_4g03302 FvH4_4g03303 FvH4_4g03303 FvH4_4g03304 FvH4_4g03305 FvH4_4g03323 FvH4_4g03323 FvH4_5g19290 FvH4_5g19290 FvH4_5g19290 FvH4_5g19291 FvH4_5g19291 FvH4_5g19310 FvH4_5g19310 FvH4_5g19310 FvH4_5g19320 FvH4_5g19321 FvH4_5g19321 FvH4_5g19321 FvH4_7g31470
malus_domestica MD00G1220300.v1.1 MD02G1050800.v1.1 MD02G1053200.v1.1 MD02G1053300.v1.1 MD02G1054900.v1.1 MD03G1032300.v1.1 MD03G1245000.v1.1 MD03G1245300.v1.1 MD05G1014200.v1.1 MD13G1210900.v1.1 MD13G1211000.v1.1 MD13G1211100.v1.1 MD13G1211200.v1.1 MD13G1211800.v1.1 MD13G1211900.v1.1 MD13G1212000.v1.1 MD16G1214100.v1.1 MD16G1214300.v1.1 MD16G1214400.v1.1 MD16G1214600.v1.1 MD16G1215000.v1.1 MD16G1215200.v1.1 MD16G1215300.v1.1 MD16G1215500.v1.1 MD16G1271000.v1.1
prunus_persica Prupe.1G035500_v2.0.a1 Prupe.1G035700_v2.0.a1 Prupe.1G035800_v2.0.a1 Prupe.1G035900_v2.0.a1 Prupe.1G036000_v2.0.a1 Prupe.1G036100_v2.0.a1 Prupe.1G036200_v2.0.a1 Prupe.1G036400_v2.0.a1 Prupe.1G036500_v2.0.a1 Prupe.1G036600_v2.0.a1 Prupe.1G036700_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G191000_v2.0.a1 Prupe.1G191100_v2.0.a1
pyrus_communis pycom13g18340 pycom13g18350 pycom13g18380 pycom16g17990 pycom16g18010 pycom16g18020
rosa_chinensis RchiOBHm_Chr2g0124051 RchiOBHm_Chr4g0391811 RchiOBHm_Chr4g0391931 RchiOBHm_Chr4g0391961 RchiOBHm_Chr4g0391971 RchiOBHm_Chr4g0391981 RchiOBHm_Chr4g0391991 RchiOBHm_Chr4g0392031 RchiOBHm_Chr4g0392051 RchiOBHm_Chr4g0392061 RchiOBHm_Chr4g0392071 RchiOBHm_Chr4g0392081 RchiOBHm_Chr4g0392091 RchiOBHm_Chr4g0392111 RchiOBHm_Chr4g0392121 RchiOBHm_Chr4g0392131 RchiOBHm_Chr4g0392141 RchiOBHm_Chr4g0392151 RchiOBHm_Chr4g0392211 RchiOBHm_Chr4g0392251 RchiOBHm_Chr4g0392261 RchiOBHm_Chr4g0392301 RchiOBHm_Chr4g0392311 RchiOBHm_Chr4g0392341 RchiOBHm_Chr4g0409221 RchiOBHm_Chr4g0410991 RchiOBHm_Chr4g0429131 RchiOBHm_Chr4g0437051 RchiOBHm_Chr5g0038681 RchiOBHm_Chr5g0047071 RchiOBHm_Chr5g0058651 RchiOBHm_Chr6g0248121 RchiOBHm_Chr6g0248141 RchiOBHm_Chr6g0248291 RchiOBHm_Chr6g0248341 RchiOBHm_Chr6g0248351
rosa_laevigata RLG00000006473 RLG00000006475 RLG00000006667 RLG00000007095 RLG00000009819 RLG00000009820 RLG00000009821 RLG00000009822 RLG00000009825 RLG00000009826 RLG00000009830 RLG00000009831 RLG00000009832 RLG00000009833 RLG00000009834 RLG00000009835 RLG00000009837 RLG00000009838 RLG00000009839 RLG00000009841 RLG00000009842 RLG00000009844 RLG00000009845 RLG00000009846 RLG00000009847 RLG00000009848 RLG00000009849 RLG00000015160 RLG00000015161 RLG00000017791 RLG00000018779 RLG00000034461 RLG00000035237
rosa_multiflora Rmu_co8253791.1_g000001 Rmu_co8348827.1_g000001 Rmu_co8400489.1_g000001 Rmu_sc0000383.1_g000003 Rmu_sc0000383.1_g000005 Rmu_sc0000383.1_g000026 Rmu_sc0000846.1_g000012 Rmu_sc0001231.1_g000013 Rmu_sc0001231.1_g000026 Rmu_sc0001231.1_g000028 Rmu_sc0001800.1_g000027 Rmu_sc0003436.1_g000022 Rmu_sc0004104.1_g000004 Rmu_sc0004295.1_g000021 Rmu_sc0004295.1_g000031 Rmu_sc0004928.1_g000002 Rmu_sc0004928.1_g000008 Rmu_sc0004928.1_g000011 Rmu_sc0004928.1_g000027 Rmu_sc0004977.1_g000007 Rmu_sc0005018.1_g000002 Rmu_sc0005091.1_g000026 Rmu_sc0005091.1_g000032 Rmu_sc0005091.1_g000033 Rmu_sc0005817.1_g000003 Rmu_sc0005817.1_g000008 Rmu_sc0012482.1_g000002 Rmu_sc0014210.1_g000001 Rmu_sc0016150.1_g000001 Rmu_sc0029701.1_g000002 Rmu_sc0036585.1_g000001 Rmu_sc0037489.1_g000002
rosa_roxburghii Rroxscaffold_1G00021790 Rroxscaffold_1G00021800 Rroxscaffold_1G00034360 Rroxscaffold_2G00120130 Rroxscaffold_5G00337210 Rroxscaffold_5G00337220 Rroxscaffold_5G00337230 Rroxscaffold_5G00337250 Rroxscaffold_5G00337260 Rroxscaffold_5G00337270 Rroxscaffold_5G00337300 Rroxscaffold_5G00337310 Rroxscaffold_5G00337320 Rroxscaffold_5G00337330 Rroxscaffold_5G00337350 Rroxscaffold_5G00337370 Rroxscaffold_5G00337390 Rroxscaffold_5G00337400 Rroxscaffold_5G00337420 Rroxscaffold_5G00337430 Rroxscaffold_5G00337450 Rroxscaffold_5G00337470 Rroxscaffold_5G00337480 Rroxscaffold_5G00337520 Rroxscaffold_5G00378130 Rroxscaffold_6G00397800 Rroxscaffold_7G00213320 Rroxscaffold_7G00213390 Rroxscaffold_7G00213420 Rroxscaffold_7G00213470
rosa_rugosa Rorug02G0070100 Rorug02G0070100 Rorug02G0070100 Rorug02G0128600 Rorug02G0128700 Rorug02G0128800 Rorug02G0128900 Rorug02G0248400 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337100 Rorug03G0337200 Rorug03G0337300 Rorug03G0337600 Rorug03G0337700 Rorug03G0337800 Rorug03G0337900 Rorug03G0337900 Rorug03G0338000 Rorug03G0338100 Rorug03G0338200 Rorug04G0233200.1 Rorug04G0297900 Rorug05G0233700 Rorug05G0316700 Rorug05G0530800 Rorug05G0530900
rosa_samantha Rh2AG307400 Rh2BG316500 Rh2DG331200 Rh4AG039300 Rh4AG039400 Rh4AG039600 Rh4AG039700 Rh4AG039900 Rh4AG040000 Rh4AG040100 Rh4AG040300 Rh4AG040500 Rh4AG040700 Rh4AG041000 Rh4AG041100 Rh4AG041600 Rh4AG041800 Rh4AG041900 Rh4AG352400 Rh4BG033200 Rh4BG034100 Rh4BG034300 Rh4BG034700 Rh4BG034800 Rh4BG035200 Rh4BG035400 Rh4BG036000 Rh4BG036200 Rh4BG036300 Rh4BG036500 Rh4BG036800 Rh4BG361700 Rh4CG042000 Rh4CG042200 Rh4CG042300 Rh4CG042500 Rh4CG042600 Rh4CG042800 Rh4CG043200 Rh4CG043400 Rh4CG043500 Rh4CG043700 Rh4CG043800 Rh4CG044200 Rh4CG044500 Rh4CG044700 Rh4CG177000 Rh4CG310600 Rh4CG376000 Rh4DG036300 Rh4DG036900 Rh4DG037000 Rh4DG037100 Rh4DG037200 Rh4DG037300 Rh4DG037500 Rh4DG037700 Rh4DG037800 Rh4DG037900 Rh4DG038000 Rh4DG038200 Rh4DG038500 Rh4DG038700 Rh4DG038900 Rh4DG159600 Rh5CG347900 Rh5DG409900 Rh6AG045300 Rh6AG045800 Rh6AG046000 Rh6AG046100 Rh6BG040600 Rh6BG040700 Rh6BG042200 Rh6BG042700 Rh6BG042800 Rh6DG035900 Rh6DG036100 Rh6DG036200
rosa_wichuraiana Rw0G010420 Rw2G024780 Rw4G003020 Rw4G003070 Rw4G003080 Rw4G003090 Rw4G003100 Rw4G003130 Rw4G003140 Rw4G003150 Rw4G003180 Rw4G003190 Rw4G003200 Rw4G003210 Rw4G003220 Rw4G003240 Rw4G003270 Rw4G025050 Rw4G030850 Rw6G003930 Rw6G004000 Rw6G004030 Rw6G004040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 405
AciI CCGC 3 cut(s) 89, 125, 179
AcsI RAATTY 1 cut(s) 111
AcuI CTGAAG 1 cut(s) 700
AcvI CACGTG 1 cut(s) 335
AfaI GTAC 2 cut(s) 870, 882
AfiI CCNNNNNNNGG 2 cut(s) 130, 803
AgeI ACCGGT 1 cut(s) 298
AgsI TTSAA 5 cut(s) 194, 203, 533, 862, 1084
AhdI GACNNNNNGTC 1 cut(s) 401
AhlI ACTAGT 1 cut(s) 443
AleI CACNNNNGTG 1 cut(s) 359
AluBI AGCT 8 cut(s) 47, 147, 373, 720, 809, 841, 976, 1087
AluI AGCT 8 cut(s) 47, 147, 373, 720, 809, 841, 976, 1087
Alw21I GWGCWC 2 cut(s) 436, 811
Alw26I GTCTC 5 cut(s) 254, 513, 761, 1004, 1080
Alw44I GTGCAC 1 cut(s) 432
AoxI GGCC 4 cut(s) 76, 196, 595, 1051
ApaLI GTGCAC 1 cut(s) 432
ApeKI GCWGC 1 cut(s) 838
ApoI RAATTY 1 cut(s) 111
AseI ATTAAT 1 cut(s) 786
AsiGI ACCGGT 1 cut(s) 298
AspLEI GCGC 1 cut(s) 225
AspS9I GGNCC 2 cut(s) 899, 962
AsuC2I CCSGG 1 cut(s) 804
AsuHPI GGTGA 2 cut(s) 113, 722
AsuII TTCGAA 1 cut(s) 539
AvaII GGWCC 2 cut(s) 899, 962
BaeGI GKGCMC 3 cut(s) 334, 436, 804
BanII GRGCYC 1 cut(s) 811
BauI CACGAG 1 cut(s) 381
BbrPI CACGTG 1 cut(s) 335
BbsI GAAGAC 1 cut(s) 993
Bbv12I GWGCWC 2 cut(s) 436, 811
BbvI GCAGC 1 cut(s) 850
BccI CCATC 1 cut(s) 1052
BcgI CGANNNNNNTGC 2 cut(s) 237, 271
BciVI GTATCC 1 cut(s) 919
BcnI CCSGG 1 cut(s) 804
BcoDI GTCTC 5 cut(s) 254, 513, 761, 1004, 1080
BcuI ACTAGT 1 cut(s) 443
BfaI CTAG 2 cut(s) 128, 444
BfmI CTRYAG 1 cut(s) 836
BfuI GTATCC 1 cut(s) 919
BglI GCCNNNNNGGC 1 cut(s) 1059
BglII AGATCT 2 cut(s) 187, 829
BisI GCNGC 1 cut(s) 839
BlsI GCNGC 1 cut(s) 840
Bme1390I CCNGG 1 cut(s) 804
Bme18I GGWCC 2 cut(s) 899, 962
BmeRI GACNNNNNGTC 1 cut(s) 401
BmgT120I GGNCC 2 cut(s) 899, 962
BmiI GGNNCC 2 cut(s) 477, 697
BmrFI CCNGG 1 cut(s) 804
BmsI GCATC 2 cut(s) 76, 263
BpiI GAAGAC 1 cut(s) 993
BpmI CTGGAG 1 cut(s) 376
Bpu10I CCTNAGC 1 cut(s) 489
Bpu14I TTCGAA 1 cut(s) 539
BpuEI CTTGAG 1 cut(s) 342
BpuMI CCSGG 1 cut(s) 804
BsaAI YACGTR 1 cut(s) 335
BsaI GGTCTC 1 cut(s) 761
BsaWI WCCGGW 1 cut(s) 298
BsaXI ACNNNNNCTCC 4 cut(s) 442, 472, 798, 828
Bsc4I CCNNNNNNNGG 2 cut(s) 130, 803
Bse118I RCCGGY 3 cut(s) 298, 436, 932
Bse1I ACTGG 3 cut(s) 166, 531, 888
Bse3DI GCAATG 1 cut(s) 912
BseLI CCNNNNNNNGG 2 cut(s) 130, 803
BseMI GCAATG 1 cut(s) 912
BseMII CTCAG 2 cut(s) 785, 1091
BseNI ACTGG 3 cut(s) 166, 531, 888
BseRI GAGGAG 2 cut(s) 146, 329
BseSI GKGCMC 3 cut(s) 334, 436, 804
BseXI GCAGC 1 cut(s) 850
Bsh1285I CGRYCG 1 cut(s) 28
BshFI GGCC 4 cut(s) 78, 198, 597, 1053
BshTI ACCGGT 1 cut(s) 298
BsiEI CGRYCG 1 cut(s) 28
BsiHKAI GWGCWC 2 cut(s) 436, 811
BsiSI CCGG 6 cut(s) 299, 437, 494, 680, 804, 933
BslFI GGGAC 1 cut(s) 1037
BslI CCNNNNNNNGG 2 cut(s) 130, 803
BsmAI GTCTC 5 cut(s) 254, 513, 761, 1004, 1080
BsmFI GGGAC 1 cut(s) 1037
BsnI GGCC 4 cut(s) 78, 198, 597, 1053
Bso31I GGTCTC 1 cut(s) 761
Bsp119I TTCGAA 1 cut(s) 539
Bsp1286I GDGCHC 4 cut(s) 334, 436, 804, 811
Bsp143I GATC 5 cut(s) 187, 421, 742, 829, 966
BspACI CCGC 3 cut(s) 89, 125, 179
BspANI GGCC 4 cut(s) 78, 198, 597, 1053
BspCNI CTCAG 2 cut(s) 784, 1090
BspLI GGNNCC 2 cut(s) 477, 697
BspMAI CTGCAG 1 cut(s) 840
BspT104I TTCGAA 1 cut(s) 539
BspTNI GGTCTC 1 cut(s) 761
BsrDI GCAATG 1 cut(s) 912
BsrFI RCCGGY 3 cut(s) 298, 436, 932
BsrI ACTGG 3 cut(s) 166, 531, 888
BssAI RCCGGY 3 cut(s) 298, 436, 932
BssMI GATC 5 cut(s) 187, 421, 742, 829, 966
BssSI CACGAG 1 cut(s) 381
Bst2BI CACGAG 1 cut(s) 381
Bst4CI ACNGT 4 cut(s) 710, 893, 945, 1018
BstBAI YACGTR 1 cut(s) 335
BstBI TTCGAA 1 cut(s) 539
BstC8I GCNNGC 3 cut(s) 91, 163, 919
BstDEI CTNAG 5 cut(s) 219, 489, 650, 771, 1077
BstHHI GCGC 1 cut(s) 225
BstKTI GATC 5 cut(s) 190, 424, 745, 832, 969
BstMAI GTCTC 5 cut(s) 254, 513, 761, 1004, 1080
BstMBI GATC 5 cut(s) 187, 421, 742, 829, 966
BstMCI CGRYCG 1 cut(s) 28
BstMWI GCNNNNNNNGC 3 cut(s) 171, 245, 1059
BstNSI RCATGY 1 cut(s) 940
BstSCI CCNGG 1 cut(s) 802
BstSFI CTRYAG 1 cut(s) 836
BstSLI GKGCMC 3 cut(s) 334, 436, 804
BstV1I GCAGC 1 cut(s) 850
BstV2I GAAGAC 1 cut(s) 993
BstX2I RGATCY 2 cut(s) 187, 829
BstXI CCANNNNNNTGG 1 cut(s) 400
BstYI RGATCY 2 cut(s) 187, 829
BsuI GTATCC 1 cut(s) 919
BsuRI GGCC 4 cut(s) 78, 198, 597, 1053
Cac8I GCNNGC 3 cut(s) 91, 163, 919
CfoI GCGC 1 cut(s) 225
Cfr10I RCCGGY 3 cut(s) 298, 436, 932
Cfr13I GGNCC 2 cut(s) 899, 962
Csp6I GTAC 2 cut(s) 869, 881
CspAI ACCGGT 1 cut(s) 298
CviAII CATG 3 cut(s) 290, 472, 937
CviQI GTAC 2 cut(s) 869, 881
DdeI CTNAG 5 cut(s) 219, 489, 650, 771, 1077
DpnI GATC 5 cut(s) 189, 423, 744, 831, 968
DpnII GATC 5 cut(s) 187, 421, 742, 829, 966
DriI GACNNNNNGTC 1 cut(s) 401
Eam1105I GACNNNNNGTC 1 cut(s) 401
Ecl136II GAGCTC 1 cut(s) 809
Eco147I AGGCCT 3 cut(s) 78, 198, 1053
Eco24I GRGCYC 1 cut(s) 811
Eco31I GGTCTC 1 cut(s) 761
Eco47I GGWCC 2 cut(s) 899, 962
Eco53kI GAGCTC 1 cut(s) 809
Eco57I CTGAAG 1 cut(s) 700
Eco72I CACGTG 1 cut(s) 335
EcoICRI GAGCTC 1 cut(s) 809
EcoT38I GRGCYC 1 cut(s) 811
FaeI CATG 3 cut(s) 293, 475, 940
FaqI GGGAC 1 cut(s) 1037
FatI CATG 3 cut(s) 289, 471, 936
FauI CCCGC 2 cut(s) 82, 132
FblI GTMKAC 1 cut(s) 405
Fnu4HI GCNGC 1 cut(s) 839
FriOI GRGCYC 1 cut(s) 811
Fsp4HI GCNGC 1 cut(s) 839
FspBI CTAG 2 cut(s) 128, 444
GlaI GCGC 1 cut(s) 224
GluI GCNGC 1 cut(s) 839
GsuI CTGGAG 1 cut(s) 376
HaeIII GGCC 4 cut(s) 78, 198, 597, 1053
HapII CCGG 6 cut(s) 299, 437, 494, 680, 804, 933
HhaI GCGC 1 cut(s) 225
Hin1II CATG 3 cut(s) 293, 475, 940
Hin6I GCGC 1 cut(s) 223
HinP1I GCGC 1 cut(s) 223
HincII GTYRAC 1 cut(s) 948
HindII GTYRAC 1 cut(s) 948
HindIII AAGCTT 2 cut(s) 45, 1085
HinfI GANTC 4 cut(s) 134, 152, 688, 858
HpaII CCGG 6 cut(s) 299, 437, 494, 680, 804, 933
HphI GGTGA 2 cut(s) 113, 722
Hpy166II GTNNAC 5 cut(s) 386, 406, 434, 674, 948
Hpy188I TCNGA 8 cut(s) 139, 151, 157, 259, 279, 586, 774, 985
Hpy188III TCNNGA 4 cut(s) 383, 393, 727, 862
Hpy8I GTNNAC 5 cut(s) 386, 406, 434, 674, 948
HpyAV CCTTC 2 cut(s) 59, 361
HpyCH4III ACNGT 4 cut(s) 710, 893, 945, 1018
HpyCH4IV ACGT 3 cut(s) 334, 1029, 1038
HpyCH4V TGCA 7 cut(s) 239, 284, 434, 516, 574, 838, 917
HpyF10VI GCNNNNNNNGC 3 cut(s) 171, 245, 1059
HpyF3I CTNAG 5 cut(s) 219, 489, 650, 771, 1077
HpySE526I ACGT 3 cut(s) 334, 1029, 1038
Hsp92II CATG 3 cut(s) 293, 475, 940
HspAI GCGC 1 cut(s) 223
Kzo9I GATC 5 cut(s) 187, 421, 742, 829, 966
LmnI GCTCC 5 cut(s) 152, 370, 481, 806, 973
Lsp1109I GCAGC 1 cut(s) 850
LweI GCATC 2 cut(s) 76, 263
MaeI CTAG 2 cut(s) 128, 444
MaeII ACGT 3 cut(s) 334, 1029, 1038
MaeIII GTNAC 4 cut(s) 467, 608, 710, 939
MalI GATC 5 cut(s) 189, 423, 744, 831, 968
MboI GATC 5 cut(s) 187, 421, 742, 829, 966
MboII GAAGA 6 cut(s) 182, 376, 509, 758, 824, 998
MflI RGATCY 2 cut(s) 187, 829
MhlI GDGCHC 4 cut(s) 334, 436, 804, 811
MluCI AATT 5 cut(s) 19, 111, 415, 500, 683
MlyI GAGTC 2 cut(s) 143, 682
MmeI TCCRAC 3 cut(s) 117, 428, 564
MseI TTAA 4 cut(s) 72, 614, 786, 819
MslI CAYNNNNRTG 4 cut(s) 359, 615, 750, 935
MspI CCGG 6 cut(s) 299, 437, 494, 680, 804, 933
MspR9I CCNGG 1 cut(s) 804
MwoI GCNNNNNNNGC 3 cut(s) 171, 245, 1059
NciI CCSGG 1 cut(s) 804
NdeII GATC 5 cut(s) 187, 421, 742, 829, 966
NlaIII CATG 3 cut(s) 293, 475, 940
NlaIV GGNNCC 2 cut(s) 477, 697
NmuCI GTSAC 2 cut(s) 608, 710
NspI RCATGY 1 cut(s) 940
NspV TTCGAA 1 cut(s) 539
OliI CACNNNNGTG 1 cut(s) 359
PceI AGGCCT 3 cut(s) 78, 198, 1053
PcsI WCGNNNNNNNCGW 1 cut(s) 1035
PfeI GAWTC 2 cut(s) 152, 858
PinAI ACCGGT 1 cut(s) 298
PkrI GCNGC 1 cut(s) 840
PleI GAGTC 2 cut(s) 142, 682
PmaCI CACGTG 1 cut(s) 335
PmlI CACGTG 1 cut(s) 335
PpsI GAGTC 2 cut(s) 142, 682
Ppu21I YACGTR 1 cut(s) 335
PshBI ATTAAT 1 cut(s) 786
Psp124BI GAGCTC 1 cut(s) 811
PspCI CACGTG 1 cut(s) 335
PspN4I GGNNCC 2 cut(s) 477, 697
PspPI GGNCC 2 cut(s) 899, 962
PstI CTGCAG 1 cut(s) 840
PsuI RGATCY 2 cut(s) 187, 829
RsaI GTAC 2 cut(s) 870, 882
RsaNI GTAC 2 cut(s) 869, 881
RseI CAYNNNNRTG 4 cut(s) 359, 615, 750, 935
SacI GAGCTC 1 cut(s) 811
SaqAI TTAA 4 cut(s) 72, 614, 786, 819
SatI GCNGC 1 cut(s) 839
Sau3AI GATC 5 cut(s) 187, 421, 742, 829, 966
Sau96I GGNCC 2 cut(s) 899, 962
SchI GAGTC 2 cut(s) 143, 682
ScrFI CCNGG 1 cut(s) 804
SduI GDGCHC 4 cut(s) 334, 436, 804, 811
SfaNI GCATC 2 cut(s) 76, 263
SfcI CTRYAG 1 cut(s) 836
SfuI TTCGAA 1 cut(s) 539
SinI GGWCC 2 cut(s) 899, 962
SmiMI CAYNNNNRTG 4 cut(s) 359, 615, 750, 935
SmlI CTYRAG 1 cut(s) 357
SmoI CTYRAG 1 cut(s) 357
SpeI ACTAGT 1 cut(s) 443
Sse9I AATT 5 cut(s) 19, 111, 415, 500, 683
SseBI AGGCCT 3 cut(s) 78, 198, 1053
SsiI CCGC 3 cut(s) 89, 125, 179
SspI AATATT 2 cut(s) 536, 823
SspMI CTAG 2 cut(s) 128, 444
SstI GAGCTC 1 cut(s) 811
StuI AGGCCT 3 cut(s) 78, 198, 1053
StyD4I CCNGG 1 cut(s) 802
TaaI ACNGT 4 cut(s) 710, 893, 945, 1018
TaiI ACGT 3 cut(s) 337, 1032, 1041
TaqI TCGA 2 cut(s) 109, 539
TaqII GACCGA 2 cut(s) 42, 979
TasI AATT 5 cut(s) 19, 111, 415, 500, 683
TfiI GAWTC 2 cut(s) 152, 858
Tru1I TTAA 4 cut(s) 72, 614, 786, 819
Tru9I TTAA 4 cut(s) 72, 614, 786, 819
TseFI GTSAC 2 cut(s) 608, 710
TseI GCWGC 1 cut(s) 838
Tsp45I GTSAC 2 cut(s) 608, 710
TspDTI ATGAA 3 cut(s) 107, 335, 566
TspGWI ACGGA 1 cut(s) 113
VneI GTGCAC 1 cut(s) 432
VpaK11BI GGWCC 2 cut(s) 899, 962
VspI ATTAAT 1 cut(s) 786
XapI RAATTY 1 cut(s) 111
XceI RCATGY 1 cut(s) 940
XmiI GTMKAC 1 cut(s) 405
XspI CTAG 2 cut(s) 128, 444
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.