RLG00000009838

Belongs to the iron ascorbate-dependent oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0000054
Physical Location & Seq
Reverse (-)
58756620 .. 58762087
5468 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000009838

Sequence Viewer

Length: 1767 bp
ATGACAGAAGAAACCCAATATAGCATTCCAGTCATTGATTTTGAAGGCCTTTCCGATTCAACTAAACAAAAGGAGATTGTTGCAAAAGTTGGAGACGCATCAGAGACTTGGGGCTTCTTTCAGATAGTCAACCATGGAATACCTGTTGATGTTCTTGGAGAGATAAAAAACGGGGTCCGTCGGTTTTTTGAGCAGGACACTGAGGTGAAGAAACATCTCTATGGTTGCGATCACTTTAGGAATCCTGTGCTTTACAATAGCAACTTTGATCTGTATAGTGCACCGACGAGTAATTGGAGAGATACTTTTTCGTGTTACATGGCTCCAACTCCTACTAAGCGAGAAGACTTGCCAGAAGTATGCAGAGACATACTTGTTGAGTACTCGGACCAAGTAATGAAGTTGGGGAAGCTATTGTTCGACTTGTTGTCTGAAGCTCTTGGATTGAAGCCAAGTCACTTGAATGACATAGATTGTACTGAGGGGCATCTGTTAGCAGGCCATTACTATCCCCCTTGTCCACAGCCAGAACTAACTCTAGGCGCAACCAAACATGCTGATAATGCCTTCCTTACTGTTCTTATGCAAGACCATATTGGTGGTCTTCAAGTCCTTCACCAGAACAAGTGGTTTGATGTACCCCCCGTGCACGGTGCTCTTGTGGTTAATATTGGAGATCTTCTGCAGGCAAGATTGCTGCCAGTAACAAAACTCTATGGACACATCAAGGAGTTGCTATCAGAAGACAATCCTCCGAAGTACAGGGAGACTACTGTTAGGGACTATTTTGCCTACTTCAATCAAAAAGGCCTCGATGATGAGTACTCTATCCATGATTTCAGTGATCCAGAAGAAACCCAATATAGCGTTCCAGTCATTGATCTTGAAGGCCTTTTCGATTCAACTAAACAAAAGGAGATTGTTGCAAAAGTTGGAGATGCATCAGAGACTTGGGGCTTCTTTCAGATAGTCAACCATGGAATACCTGTTGATGTTCTTGGGGAGATGAAAAATGGAGTCCGTCGGTTTTATGAGCAGGACACTGAGGTGAAAAAACAGCTTTATGGTCGCGATCACTTCAGGAATCCTGTGCTCTACAATAGCAACTTTGATCTGTATAGTGCACCGGCGACTAATTGGAGAGATACTTTTTCGTGTTACATGGCTCCAACTCCTACTAAGCGAGAAGACTTTCCAGAAGTATGCAGCTTCCTCACTGTTCTTCTGCAAGACCATATTGGTGGTCTTCAAGACCTTCACCAGAACAAGTGGATTGATGTACTCCCAGTGCCAGGGGCTCTTGTGGTTAACATTGGAGATCTTCTGCAGGCAAAGAAACCAGCTTCCATTGCTTGTAAGATTGAAGCAATATTGAACCTTGAATTGAGAACTGGGATTTGTATGGGCTCGGACACAGCGATGGGTTTTCAAATCGGCTATGGCAAATTGCTTACAAGCTTGCCGAAAATCTGTTCTAGAGGCACTCCGATCACCAAAGGTGGAGTTGCCGACCGGGAAAAAACTCATCTTAGATTCAAGGGTGTCGAACACGGGGTACTGGCAAACAGTAGAGGTCCACGAGTATCGATTGCAAGCTTTTTCTGCATAGGATTGTTGCCATTACCAAGACTCTACGGACCAATCAAGGAGTTTTTATCAGAAGGCAATCCTCCAAAGTACAGGGAGACTACTGTTGGGGACTATGTTGCCTACTTCAATGGGAAAGGCCTTGATGGCACCTCTGTTTTGTCTCACTTTAAGGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2OG-FeII_Oxy DIOX_N

Protein Analysis

589

Amino Acids

66.02

Weight (kDa)

5.59

Isoelectric Point (pI)

37.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 9 - 112 1.2e-19 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 163 - 229 2e-20 2OG-Fe(II) oxygenase superfamily
DIOX_N PF14226 290 - 393 1.5e-19 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 403 - 443 1.9e-08 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000054)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03400 AT1G03400 AT1G03410 AT1G03410 AT1G04350 AT1G06620 AT1G06620 AT1G06640 AT1G06640 AT1G06640 AT1G06645 AT1G06650 AT1G06650 AT2G25450 AT2G30830 AT2G30840 AT2G30840 AT2G30840 AT3G61400 AT3G61400 AT5G43440 AT5G43440 AT5G43450 AT5G43450 AT5G59530 AT5G59540 AT5G59540
fragaria_vesca FvH4_2g03190 FvH4_2g03220 FvH4_3g07861 FvH4_3g31880 FvH4_3g31880 FvH4_3g31880 FvH4_4g03241 FvH4_4g03250 FvH4_4g03251 FvH4_4g03260 FvH4_4g03300 FvH4_4g03301 FvH4_4g03301 FvH4_4g03301 FvH4_4g03302 FvH4_4g03303 FvH4_4g03303 FvH4_4g03304 FvH4_4g03305 FvH4_4g03323 FvH4_4g03323 FvH4_5g19290 FvH4_5g19290 FvH4_5g19290 FvH4_5g19291 FvH4_5g19291 FvH4_5g19310 FvH4_5g19310 FvH4_5g19310 FvH4_5g19320 FvH4_5g19321 FvH4_5g19321 FvH4_5g19321 FvH4_7g31470
malus_domestica MD00G1220300.v1.1 MD02G1050800.v1.1 MD02G1053200.v1.1 MD02G1053300.v1.1 MD02G1054900.v1.1 MD03G1032300.v1.1 MD03G1245000.v1.1 MD03G1245300.v1.1 MD05G1014200.v1.1 MD13G1210900.v1.1 MD13G1211000.v1.1 MD13G1211100.v1.1 MD13G1211200.v1.1 MD13G1211800.v1.1 MD13G1211900.v1.1 MD13G1212000.v1.1 MD16G1214100.v1.1 MD16G1214300.v1.1 MD16G1214400.v1.1 MD16G1214600.v1.1 MD16G1215000.v1.1 MD16G1215200.v1.1 MD16G1215300.v1.1 MD16G1215500.v1.1 MD16G1271000.v1.1
prunus_persica Prupe.1G035500_v2.0.a1 Prupe.1G035700_v2.0.a1 Prupe.1G035800_v2.0.a1 Prupe.1G035900_v2.0.a1 Prupe.1G036000_v2.0.a1 Prupe.1G036100_v2.0.a1 Prupe.1G036200_v2.0.a1 Prupe.1G036400_v2.0.a1 Prupe.1G036500_v2.0.a1 Prupe.1G036600_v2.0.a1 Prupe.1G036700_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G191000_v2.0.a1 Prupe.1G191100_v2.0.a1
pyrus_communis pycom13g18340 pycom13g18350 pycom13g18380 pycom16g17990 pycom16g18010 pycom16g18020
rosa_chinensis RchiOBHm_Chr2g0124051 RchiOBHm_Chr4g0391811 RchiOBHm_Chr4g0391931 RchiOBHm_Chr4g0391961 RchiOBHm_Chr4g0391971 RchiOBHm_Chr4g0391981 RchiOBHm_Chr4g0391991 RchiOBHm_Chr4g0392031 RchiOBHm_Chr4g0392051 RchiOBHm_Chr4g0392061 RchiOBHm_Chr4g0392071 RchiOBHm_Chr4g0392081 RchiOBHm_Chr4g0392091 RchiOBHm_Chr4g0392111 RchiOBHm_Chr4g0392121 RchiOBHm_Chr4g0392131 RchiOBHm_Chr4g0392141 RchiOBHm_Chr4g0392151 RchiOBHm_Chr4g0392211 RchiOBHm_Chr4g0392251 RchiOBHm_Chr4g0392261 RchiOBHm_Chr4g0392301 RchiOBHm_Chr4g0392311 RchiOBHm_Chr4g0392341 RchiOBHm_Chr4g0409221 RchiOBHm_Chr4g0410991 RchiOBHm_Chr4g0429131 RchiOBHm_Chr4g0437051 RchiOBHm_Chr5g0038681 RchiOBHm_Chr5g0047071 RchiOBHm_Chr5g0058651 RchiOBHm_Chr6g0248121 RchiOBHm_Chr6g0248141 RchiOBHm_Chr6g0248291 RchiOBHm_Chr6g0248341 RchiOBHm_Chr6g0248351
rosa_laevigata RLG00000006473 RLG00000006475 RLG00000006667 RLG00000007095 RLG00000009819 RLG00000009820 RLG00000009821 RLG00000009822 RLG00000009825 RLG00000009826 RLG00000009830 RLG00000009831 RLG00000009832 RLG00000009833 RLG00000009834 RLG00000009835 RLG00000009837 RLG00000009838 RLG00000009839 RLG00000009841 RLG00000009842 RLG00000009844 RLG00000009845 RLG00000009846 RLG00000009847 RLG00000009848 RLG00000009849 RLG00000015160 RLG00000015161 RLG00000017791 RLG00000018779 RLG00000034461 RLG00000035237
rosa_multiflora Rmu_co8253791.1_g000001 Rmu_co8348827.1_g000001 Rmu_co8400489.1_g000001 Rmu_sc0000383.1_g000003 Rmu_sc0000383.1_g000005 Rmu_sc0000383.1_g000026 Rmu_sc0000846.1_g000012 Rmu_sc0001231.1_g000013 Rmu_sc0001231.1_g000026 Rmu_sc0001231.1_g000028 Rmu_sc0001800.1_g000027 Rmu_sc0003436.1_g000022 Rmu_sc0004104.1_g000004 Rmu_sc0004295.1_g000021 Rmu_sc0004295.1_g000031 Rmu_sc0004928.1_g000002 Rmu_sc0004928.1_g000008 Rmu_sc0004928.1_g000011 Rmu_sc0004928.1_g000027 Rmu_sc0004977.1_g000007 Rmu_sc0005018.1_g000002 Rmu_sc0005091.1_g000026 Rmu_sc0005091.1_g000032 Rmu_sc0005091.1_g000033 Rmu_sc0005817.1_g000003 Rmu_sc0005817.1_g000008 Rmu_sc0012482.1_g000002 Rmu_sc0014210.1_g000001 Rmu_sc0016150.1_g000001 Rmu_sc0029701.1_g000002 Rmu_sc0036585.1_g000001 Rmu_sc0037489.1_g000002
rosa_roxburghii Rroxscaffold_1G00021790 Rroxscaffold_1G00021800 Rroxscaffold_1G00034360 Rroxscaffold_2G00120130 Rroxscaffold_5G00337210 Rroxscaffold_5G00337220 Rroxscaffold_5G00337230 Rroxscaffold_5G00337250 Rroxscaffold_5G00337260 Rroxscaffold_5G00337270 Rroxscaffold_5G00337300 Rroxscaffold_5G00337310 Rroxscaffold_5G00337320 Rroxscaffold_5G00337330 Rroxscaffold_5G00337350 Rroxscaffold_5G00337370 Rroxscaffold_5G00337390 Rroxscaffold_5G00337400 Rroxscaffold_5G00337420 Rroxscaffold_5G00337430 Rroxscaffold_5G00337450 Rroxscaffold_5G00337470 Rroxscaffold_5G00337480 Rroxscaffold_5G00337520 Rroxscaffold_5G00378130 Rroxscaffold_6G00397800 Rroxscaffold_7G00213320 Rroxscaffold_7G00213390 Rroxscaffold_7G00213420 Rroxscaffold_7G00213470
rosa_rugosa Rorug02G0070100 Rorug02G0070100 Rorug02G0070100 Rorug02G0128600 Rorug02G0128700 Rorug02G0128800 Rorug02G0128900 Rorug02G0248400 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337100 Rorug03G0337200 Rorug03G0337300 Rorug03G0337600 Rorug03G0337700 Rorug03G0337800 Rorug03G0337900 Rorug03G0337900 Rorug03G0338000 Rorug03G0338100 Rorug03G0338200 Rorug04G0233200.1 Rorug04G0297900 Rorug05G0233700 Rorug05G0316700 Rorug05G0530800 Rorug05G0530900
rosa_samantha Rh2AG307400 Rh2BG316500 Rh2DG331200 Rh4AG039300 Rh4AG039400 Rh4AG039600 Rh4AG039700 Rh4AG039900 Rh4AG040000 Rh4AG040100 Rh4AG040300 Rh4AG040500 Rh4AG040700 Rh4AG041000 Rh4AG041100 Rh4AG041600 Rh4AG041800 Rh4AG041900 Rh4AG352400 Rh4BG033200 Rh4BG034100 Rh4BG034300 Rh4BG034700 Rh4BG034800 Rh4BG035200 Rh4BG035400 Rh4BG036000 Rh4BG036200 Rh4BG036300 Rh4BG036500 Rh4BG036800 Rh4BG361700 Rh4CG042000 Rh4CG042200 Rh4CG042300 Rh4CG042500 Rh4CG042600 Rh4CG042800 Rh4CG043200 Rh4CG043400 Rh4CG043500 Rh4CG043700 Rh4CG043800 Rh4CG044200 Rh4CG044500 Rh4CG044700 Rh4CG177000 Rh4CG310600 Rh4CG376000 Rh4DG036300 Rh4DG036900 Rh4DG037000 Rh4DG037100 Rh4DG037200 Rh4DG037300 Rh4DG037500 Rh4DG037700 Rh4DG037800 Rh4DG037900 Rh4DG038000 Rh4DG038200 Rh4DG038500 Rh4DG038700 Rh4DG038900 Rh4DG159600 Rh5CG347900 Rh5DG409900 Rh6AG045300 Rh6AG045800 Rh6AG046000 Rh6AG046100 Rh6BG040600 Rh6BG040700 Rh6BG042200 Rh6BG042700 Rh6BG042800 Rh6DG035900 Rh6DG036100 Rh6DG036200
rosa_wichuraiana Rw0G010420 Rw2G024780 Rw4G003020 Rw4G003070 Rw4G003080 Rw4G003090 Rw4G003100 Rw4G003130 Rw4G003140 Rw4G003150 Rw4G003180 Rw4G003190 Rw4G003200 Rw4G003210 Rw4G003220 Rw4G003240 Rw4G003270 Rw4G025050 Rw4G030850 Rw6G003930 Rw6G004000 Rw6G004030 Rw6G004040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1736
AccII CGCG 1 cut(s) 1071
AclWI GGATC 1 cut(s) 839
AcuI CTGAAG 2 cut(s) 453, 1063
AfaI GTAC 8 cut(s) 383, 478, 639, 761, 824, 1281, 1557, 1679
AfiI CCNNNNNNNGG 2 cut(s) 650, 1292
AhdI GACNNNNNGTC 1 cut(s) 427
AjnI CCWGG 1 cut(s) 1291
AjuI GAANNNNNNNTTGG 4 cut(s) 9, 41, 852, 884
AleI CACNNNNGTG 2 cut(s) 203, 1046
AluBI AGCT 7 cut(s) 412, 437, 1060, 1209, 1343, 1458, 1596
AluI AGCT 7 cut(s) 412, 437, 1060, 1209, 1343, 1458, 1596
Alw21I GWGCWC 5 cut(s) 283, 651, 658, 1095, 1126
Alw26I GTCTC 7 cut(s) 87, 98, 360, 761, 941, 1679, 1755
Alw44I GTGCAC 3 cut(s) 279, 647, 1122
AlwI GGATC 1 cut(s) 839
AoxI GGCC 5 cut(s) 46, 499, 808, 889, 1726
ApaLI GTGCAC 3 cut(s) 279, 647, 1122
ApeKI GCWGC 2 cut(s) 697, 1206
Asp700I GAANNNNTTC 1 cut(s) 1191
AspLEI GCGC 1 cut(s) 545
AspS9I GGNCC 4 cut(s) 175, 388, 1574, 1637
AsuC2I CCSGG 1 cut(s) 1514
AsuHPI GGTGA 5 cut(s) 217, 608, 1060, 1250, 1483
AvaII GGWCC 4 cut(s) 175, 388, 1574, 1637
BaeGI GKGCMC 3 cut(s) 283, 651, 1126
BanI GGYRCC 1 cut(s) 1736
BanII GRGCYC 2 cut(s) 1300, 1409
BauI CACGAG 1 cut(s) 1578
BbsI GAAGAC 5 cut(s) 351, 596, 750, 1194, 1238
Bbv12I GWGCWC 5 cut(s) 283, 651, 658, 1095, 1126
BbvI GCAGC 2 cut(s) 684, 1218
BccI CCATC 2 cut(s) 1414, 1727
BciT130I CCWGG 1 cut(s) 1293
BcnI CCSGG 1 cut(s) 1514
BcoDI GTCTC 7 cut(s) 87, 98, 360, 761, 941, 1679, 1755
BfaI CTAG 2 cut(s) 539, 1476
BfmI CTRYAG 2 cut(s) 683, 1325
BglI GCCNNNNNGGC 1 cut(s) 1734
BglII AGATCT 2 cut(s) 676, 1318
BisI GCNGC 2 cut(s) 698, 1207
BlsI GCNGC 2 cut(s) 699, 1208
BmcAI AGTACT 2 cut(s) 383, 824
Bme1390I CCNGG 2 cut(s) 1293, 1514
Bme18I GGWCC 4 cut(s) 175, 388, 1574, 1637
BmeRI GACNNNNNGTC 1 cut(s) 427
BmgT120I GGNCC 4 cut(s) 175, 388, 1574, 1637
BmiI GGNNCC 4 cut(s) 176, 324, 1167, 1738
BmrFI CCNGG 2 cut(s) 1293, 1514
BmrI ACTGGG 2 cut(s) 1280, 1401
BmsI GCATC 4 cut(s) 107, 496, 928, 950
BmuI ACTGGG 2 cut(s) 1280, 1401
BpiI GAAGAC 5 cut(s) 351, 596, 750, 1194, 1238
BpuMI CCSGG 1 cut(s) 1514
Bsa29I ATCGAT 1 cut(s) 1586
BsaJI CCNNGG 3 cut(s) 133, 976, 1292
Bsc4I CCNNNNNNNGG 2 cut(s) 650, 1292
Bse118I RCCGGY 1 cut(s) 1126
Bse1I ACTGG 6 cut(s) 29, 701, 872, 1286, 1396, 1563
Bse3DI GCAATG 1 cut(s) 1347
BseBI CCWGG 1 cut(s) 1293
BseCI ATCGAT 1 cut(s) 1586
BseDI CCNNGG 3 cut(s) 133, 976, 1292
BseLI CCNNNNNNNGG 2 cut(s) 650, 1292
BseMI GCAATG 1 cut(s) 1347
BseMII CTCAG 3 cut(s) 192, 471, 1035
BseNI ACTGG 6 cut(s) 29, 701, 872, 1286, 1396, 1563
BseSI GKGCMC 3 cut(s) 283, 651, 1126
BseXI GCAGC 2 cut(s) 684, 1218
Bsh1236I CGCG 1 cut(s) 1071
Bsh1285I CGRYCG 1 cut(s) 1513
BshFI GGCC 5 cut(s) 48, 501, 810, 891, 1728
BshNI GGYRCC 1 cut(s) 1736
BshVI ATCGAT 1 cut(s) 1586
BsiEI CGRYCG 1 cut(s) 1513
BsiHKAI GWGCWC 5 cut(s) 283, 651, 658, 1095, 1126
BsiSI CCGG 2 cut(s) 1127, 1513
BslFI GGGAC 2 cut(s) 794, 1712
BslI CCNNNNNNNGG 2 cut(s) 650, 1292
BsmAI GTCTC 7 cut(s) 87, 98, 360, 761, 941, 1679, 1755
BsmBI CGTCTC 1 cut(s) 87
BsmFI GGGAC 2 cut(s) 794, 1712
BsmI GAATGC 1 cut(s) 24
BsnI GGCC 5 cut(s) 48, 501, 810, 891, 1728
Bsp1286I GDGCHC 7 cut(s) 283, 651, 658, 1095, 1126, 1300, 1409
Bsp143I GATC 9 cut(s) 229, 268, 676, 844, 880, 1072, 1111, 1318, 1488
Bsp19I CCATGG 2 cut(s) 133, 976
Bsp68I TCGCGA 1 cut(s) 1071
BspANI GGCC 5 cut(s) 48, 501, 810, 891, 1728
BspCNI CTCAG 3 cut(s) 193, 472, 1036
BspDI ATCGAT 1 cut(s) 1586
BspFNI CGCG 1 cut(s) 1071
BspLI GGNNCC 4 cut(s) 176, 324, 1167, 1738
BspMAI CTGCAG 2 cut(s) 687, 1329
BspPI GGATC 1 cut(s) 839
BspT107I GGYRCC 1 cut(s) 1736
BsrDI GCAATG 1 cut(s) 1347
BsrFI RCCGGY 1 cut(s) 1126
BsrI ACTGG 6 cut(s) 29, 701, 872, 1286, 1396, 1563
BssAI RCCGGY 1 cut(s) 1126
BssECI CCNNGG 3 cut(s) 133, 976, 1292
BssMI GATC 9 cut(s) 229, 268, 676, 844, 880, 1072, 1111, 1318, 1488
BssSI CACGAG 1 cut(s) 1578
BssT1I CCWWGG 2 cut(s) 133, 976
Bst2BI CACGAG 1 cut(s) 1578
Bst2UI CCWGG 1 cut(s) 1293
Bst4CI ACNGT 6 cut(s) 577, 653, 775, 1219, 1568, 1693
BstC8I GCNNGC 5 cut(s) 499, 687, 1329, 1460, 1594
BstDEI CTNAG 6 cut(s) 201, 336, 480, 1044, 1179, 1529
BstDSI CCRYGG 2 cut(s) 133, 976
BstFNI CGCG 1 cut(s) 1071
BstHHI GCGC 1 cut(s) 545
BstKTI GATC 9 cut(s) 232, 271, 679, 847, 883, 1075, 1114, 1321, 1491
BstMAI GTCTC 7 cut(s) 87, 98, 360, 761, 941, 1679, 1755
BstMBI GATC 9 cut(s) 229, 268, 676, 844, 880, 1072, 1111, 1318, 1488
BstMCI CGRYCG 1 cut(s) 1513
BstMWI GCNNNNNNNGC 4 cut(s) 563, 1349, 1602, 1734
BstNI CCWGG 1 cut(s) 1293
BstNSI RCATGY 1 cut(s) 557
BstSCI CCNGG 2 cut(s) 1291, 1512
BstSFI CTRYAG 2 cut(s) 683, 1325
BstSLI GKGCMC 3 cut(s) 283, 651, 1126
BstUI CGCG 1 cut(s) 1071
BstV1I GCAGC 2 cut(s) 684, 1218
BstV2I GAAGAC 5 cut(s) 351, 596, 750, 1194, 1238
BstX2I RGATCY 2 cut(s) 676, 1318
BstXI CCANNNNNNTGG 2 cut(s) 599, 1241
BstYI RGATCY 2 cut(s) 676, 1318
Bsu15I ATCGAT 1 cut(s) 1586
BsuRI GGCC 5 cut(s) 48, 501, 810, 891, 1728
BsuTUI ATCGAT 1 cut(s) 1586
BtgI CCRYGG 2 cut(s) 133, 976
BtgZI GCGATG 1 cut(s) 1433
BtsIMutI CAGTG 5 cut(s) 198, 847, 1041, 1215, 1293
BtuMI TCGCGA 1 cut(s) 1071
Cac8I GCNNGC 5 cut(s) 499, 687, 1329, 1460, 1594
CfoI GCGC 1 cut(s) 545
Cfr10I RCCGGY 1 cut(s) 1126
Cfr13I GGNCC 4 cut(s) 175, 388, 1574, 1637
ClaI ATCGAT 1 cut(s) 1586
CseI GACGC 1 cut(s) 104
Csp6I GTAC 8 cut(s) 382, 477, 638, 760, 823, 1280, 1556, 1678
CviAII CATG 6 cut(s) 134, 319, 554, 833, 977, 1162
CviQI GTAC 8 cut(s) 382, 477, 638, 760, 823, 1280, 1556, 1678
DdeI CTNAG 6 cut(s) 201, 336, 480, 1044, 1179, 1529
DpnI GATC 9 cut(s) 231, 270, 678, 846, 882, 1074, 1113, 1320, 1490
DpnII GATC 9 cut(s) 229, 268, 676, 844, 880, 1072, 1111, 1318, 1488
DriI GACNNNNNGTC 1 cut(s) 427
Eam1105I GACNNNNNGTC 1 cut(s) 427
Eco130I CCWWGG 2 cut(s) 133, 976
Eco147I AGGCCT 4 cut(s) 48, 810, 891, 1728
Eco24I GRGCYC 2 cut(s) 1300, 1409
Eco47I GGWCC 4 cut(s) 175, 388, 1574, 1637
Eco57I CTGAAG 2 cut(s) 453, 1063
EcoRII CCWGG 1 cut(s) 1291
EcoT14I CCWWGG 2 cut(s) 133, 976
EcoT22I ATGCAT 1 cut(s) 943
EcoT38I GRGCYC 2 cut(s) 1300, 1409
ErhI CCWWGG 2 cut(s) 133, 976
Esp3I CGTCTC 1 cut(s) 87
FaeI CATG 6 cut(s) 137, 322, 557, 836, 980, 1165
FaqI GGGAC 2 cut(s) 794, 1712
FatI CATG 6 cut(s) 133, 318, 553, 832, 976, 1161
Fnu4HI GCNGC 2 cut(s) 698, 1207
FriOI GRGCYC 2 cut(s) 1300, 1409
Fsp4HI GCNGC 2 cut(s) 698, 1207
FspBI CTAG 2 cut(s) 539, 1476
GlaI GCGC 1 cut(s) 544
GluI GCNGC 2 cut(s) 698, 1207
HaeIII GGCC 5 cut(s) 48, 501, 810, 891, 1728
HapII CCGG 2 cut(s) 1127, 1513
HgaI GACGC 1 cut(s) 104
HhaI GCGC 1 cut(s) 545
Hin1II CATG 6 cut(s) 137, 322, 557, 836, 980, 1165
Hin6I GCGC 1 cut(s) 543
HinP1I GCGC 1 cut(s) 543
HincII GTYRAC 3 cut(s) 130, 973, 1309
HindII GTYRAC 3 cut(s) 130, 973, 1309
HindIII AAGCTT 2 cut(s) 1456, 1594
HinfI GANTC 7 cut(s) 56, 241, 899, 1017, 1084, 1533, 1629
HpaI GTTAAC 1 cut(s) 1309
HpaII CCGG 2 cut(s) 1127, 1513
HphI GGTGA 5 cut(s) 217, 608, 1060, 1250, 1483
Hpy166II GTNNAC 8 cut(s) 130, 281, 521, 649, 973, 1124, 1309, 1577
Hpy188III TCNNGA 7 cut(s) 848, 884, 1070, 1081, 1196, 1250, 1476
Hpy8I GTNNAC 8 cut(s) 130, 281, 521, 649, 973, 1124, 1309, 1577
Hpy99I CGWCG 3 cut(s) 183, 289, 1026
HpyAV CCTTC 6 cut(s) 38, 577, 623, 881, 1265, 1655
HpyCH4III ACNGT 6 cut(s) 577, 653, 775, 1219, 1568, 1693
HpyF10VI GCNNNNNNNGC 4 cut(s) 563, 1349, 1602, 1734
HpyF3I CTNAG 6 cut(s) 201, 336, 480, 1044, 1179, 1529
Hsp92II CATG 6 cut(s) 137, 322, 557, 836, 980, 1165
HspAI GCGC 1 cut(s) 543
KspAI GTTAAC 1 cut(s) 1309
Kzo9I GATC 9 cut(s) 229, 268, 676, 844, 880, 1072, 1111, 1318, 1488
LmnI GCTCC 2 cut(s) 328, 1171
Lsp1109I GCAGC 2 cut(s) 684, 1218
LweI GCATC 4 cut(s) 107, 496, 928, 950
MaeI CTAG 2 cut(s) 539, 1476
MaeIII GTNAC 4 cut(s) 314, 455, 703, 1157
MalI GATC 9 cut(s) 231, 270, 678, 846, 882, 1074, 1113, 1320, 1490
MboI GATC 9 cut(s) 229, 268, 676, 844, 880, 1072, 1111, 1318, 1488
MflI RGATCY 2 cut(s) 676, 1318
MhlI GDGCHC 7 cut(s) 283, 651, 658, 1095, 1126, 1300, 1409
MluCI AATT 4 cut(s) 292, 1135, 1382, 1445
MlyI GAGTC 2 cut(s) 1026, 1623
MmeI TCCRAC 4 cut(s) 70, 350, 913, 1193
Mph1103I ATGCAT 1 cut(s) 943
MroXI GAANNNNTTC 1 cut(s) 1191
MseI TTAA 3 cut(s) 666, 1308, 1758
MslI CAYNNNNRTG 7 cut(s) 203, 219, 462, 597, 1046, 1239, 1418
MspI CCGG 2 cut(s) 1127, 1513
MspR9I CCNGG 2 cut(s) 1293, 1514
Mva1269I GAATGC 1 cut(s) 24
MvaI CCWGG 1 cut(s) 1293
MvnI CGCG 1 cut(s) 1071
MwoI GCNNNNNNNGC 4 cut(s) 563, 1349, 1602, 1734
NciI CCSGG 1 cut(s) 1514
NcoI CCATGG 2 cut(s) 133, 976
NdeII GATC 9 cut(s) 229, 268, 676, 844, 880, 1072, 1111, 1318, 1488
NlaIII CATG 6 cut(s) 137, 322, 557, 836, 980, 1165
NlaIV GGNNCC 4 cut(s) 176, 324, 1167, 1738
NmuCI GTSAC 1 cut(s) 455
NruI TCGCGA 1 cut(s) 1071
NsiI ATGCAT 1 cut(s) 943
NspI RCATGY 1 cut(s) 557
OliI CACNNNNGTG 2 cut(s) 203, 1046
PceI AGGCCT 4 cut(s) 48, 810, 891, 1728
PcsI WCGNNNNNNNCGW 1 cut(s) 1415
PctI GAATGC 1 cut(s) 24
PdmI GAANNNNTTC 1 cut(s) 1191
PfeI GAWTC 5 cut(s) 56, 241, 899, 1084, 1533
PkrI GCNGC 2 cut(s) 699, 1208
PleI GAGTC 2 cut(s) 1025, 1623
PpsI GAGTC 2 cut(s) 1025, 1623
Psp6I CCWGG 1 cut(s) 1291
PspGI CCWGG 1 cut(s) 1291
PspN4I GGNNCC 4 cut(s) 176, 324, 1167, 1738
PspPI GGNCC 4 cut(s) 175, 388, 1574, 1637
PsrI GAACNNNNNNTAC 2 cut(s) 1539, 1571
PstI CTGCAG 2 cut(s) 687, 1329
PsuI RGATCY 2 cut(s) 676, 1318
RruI TCGCGA 1 cut(s) 1071
RsaI GTAC 8 cut(s) 383, 478, 639, 761, 824, 1281, 1557, 1679
RsaNI GTAC 8 cut(s) 382, 477, 638, 760, 823, 1280, 1556, 1678
RseI CAYNNNNRTG 7 cut(s) 203, 219, 462, 597, 1046, 1239, 1418
SaqAI TTAA 3 cut(s) 666, 1308, 1758
SatI GCNGC 2 cut(s) 698, 1207
Sau3AI GATC 9 cut(s) 229, 268, 676, 844, 880, 1072, 1111, 1318, 1488
Sau96I GGNCC 4 cut(s) 175, 388, 1574, 1637
ScaI AGTACT 2 cut(s) 383, 824
SchI GAGTC 2 cut(s) 1026, 1623
ScrFI CCNGG 2 cut(s) 1293, 1514
SduI GDGCHC 7 cut(s) 283, 651, 658, 1095, 1126, 1300, 1409
SfaNI GCATC 4 cut(s) 107, 496, 928, 950
SfcI CTRYAG 2 cut(s) 683, 1325
SgrAI CRCCGGYG 1 cut(s) 1126
SinI GGWCC 4 cut(s) 175, 388, 1574, 1637
SmiMI CAYNNNNRTG 7 cut(s) 203, 219, 462, 597, 1046, 1239, 1418
Sse9I AATT 4 cut(s) 292, 1135, 1382, 1445
SseBI AGGCCT 4 cut(s) 48, 810, 891, 1728
SspI AATATT 2 cut(s) 670, 1371
SspMI CTAG 2 cut(s) 539, 1476
StuI AGGCCT 4 cut(s) 48, 810, 891, 1728
StyD4I CCNGG 2 cut(s) 1291, 1512
StyI CCWWGG 2 cut(s) 133, 976
TaaI ACNGT 6 cut(s) 577, 653, 775, 1219, 1568, 1693
TaqI TCGA 5 cut(s) 420, 813, 897, 1545, 1586
TasI AATT 4 cut(s) 292, 1135, 1382, 1445
TatI WGTACW 6 cut(s) 381, 476, 759, 822, 1279, 1677
TfiI GAWTC 5 cut(s) 56, 241, 899, 1084, 1533
Tru1I TTAA 3 cut(s) 666, 1308, 1758
Tru9I TTAA 3 cut(s) 666, 1308, 1758
TscAI CASTG 5 cut(s) 205, 847, 1048, 1222, 1293
TseFI GTSAC 1 cut(s) 455
TseI GCWGC 2 cut(s) 697, 1206
Tsp45I GTSAC 1 cut(s) 455
TspDTI ATGAA 2 cut(s) 413, 1022
TspGWI ACGGA 3 cut(s) 167, 1010, 1650
TspRI CASTG 5 cut(s) 205, 847, 1048, 1222, 1293
VneI GTGCAC 3 cut(s) 279, 647, 1122
VpaK11BI GGWCC 4 cut(s) 175, 388, 1574, 1637
XbaI TCTAGA 1 cut(s) 1475
XceI RCATGY 1 cut(s) 557
XmnI GAANNNNTTC 1 cut(s) 1191
XspI CTAG 2 cut(s) 539, 1476
ZrmI AGTACT 2 cut(s) 383, 824
Zsp2I ATGCAT 1 cut(s) 943
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.