RLG00000009835

Belongs to the iron ascorbate-dependent oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0000054
Physical Location & Seq
Reverse (-)
58678552 .. 58699125
20574 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000009835

Sequence Viewer

Length: 2007 bp
ATGGCAGCTACCAACAAAGAAGATGTTTCTACCAACTATGACAGAAAAAGTGAACTGAAAGCTTTTGATGACACAAAGGAAGGTGTCAAAGGCCTTGTTGATGCTGGCATCGCTCAGATTCCTCGAATCTTTTATCATCCACCTGATGAGTACTCCATTAACAATACCCCTGATTCAGAAGAAGCACAGTTTAGCATTCCAGTCATAGACCTCAAGGGCCTATCAGATCCAACTAAAAGAAAGGAGATCGTTGTAGACGTTGCAGAAGCATCAGAGTCTTGGGGCTTCTTTCAAATTGTCAATCATGGAATACCTGTTGATGTGCTTGAGGAGATTAAGGATGGGGTCCGTGGGTTCTTTGAGCAAGATACTGAAGTGAAGAAACAGTTTTATACTCGTGATAACTACAGTAGCCCATTCGTCTATAATAGCAACTTTGATCTGTATAGTGCACCAGTGACTAATTGGAGGGATACTTTTAGATGTAACATGACTCCTACTCCTAAGAGGACTTGCCAGAAGTATGCAGCAAGTATGAAGTTGGGGAAGCTATTGTTTGAGTTGTTGTCTGAGGCTCTTGGGCTAAAACTAACTCACTTGAATGATATAGATTGCAGTGAGGGGCTTCTGGTTTTAGGCCATTACTATCCTGCTTGTCCACAACCAGAATTAACAATAGGCACAAGCAAGCATGCAAATAATAACTTCATCTCTGTCCTCCTGCAAGATAATATTGGTGGTCTTCAAGTCTTTCATCAGAACTGGATTGATGTACCCCATGTACCAGGTGCCTTAGTGGTTAACCTTGGAGATCTTATACAGCTTCTATCAAATGACAGATTCAAGAGTGTAGAGCACAGGGTACTGGCAAACCGTAAAGGTCCAAGAGTATCAGTTGCAAGCTTTTTCAGCACAGGAATGCTTCCATTGACCAAGCTCTATGGACCCATCAAGGAGTTATTATCAGAAGATAATCCTCCAAAAGGAACCCTGCCAAGAACACTAGACATTGAAGAGCTTGTTGAGATGACCGGGTTATTTAGACTTATATCAAATGATAGATTCAAAAGTGTAGAGCACAGGGTACTGGCAAACCATAGAGGTCCTAGGGTATCAGTTGCAAGCTTTTTCAGCACAGGAATTCTGCCATCGACAAAGCTCTACGGACCAATCAAGGAGTTATTATCAGAAGACAATCCTCCAAAGTACAGGGAGACTACTGTTAGGGACTATGTTGCCTACTTCAATGAGAAAGGCCTTGATGATGAGTACTCCATCCATGATTTCAGTGATCCAGAAGAAACCCAATATAGCATTCCAGTCATTGATCTTGAAGGCCTTTCCGATTCAACTAAACAAAAGGAGATTGTTGCAAAAGTTGGAGACGCATCAGAGACTTGGGGCTTCTTTCAGATAGTCAACCATGGAATACCTGTTGATGTTCTTGAAGAGATAAAAAATGGGGTCCGTCTGTTTTTTGAGCAGGACTCTGAGGTGAAGAAACAGCTCTATGGTCGCGATCACTTTAGGAATCCTGTGCTTTACAATAGCAACTTTGATCTGTATAGTGCACCGGCGAGTAATTGGAGAGATACTTTTTCGTGTTACATGGCTCCAACTCCTACTAAGCGAGAAGACTTGCCAGAAGTGTGCAGAGGCATACTTGTTGAGTACTCGGACCAAGTAATGAAGTTGGGGAAGCTATTGTTCGACTTGTTGTCTGAAGCTCTTGGATTGAAGCCAAGTCACTTGAATGACATAGATTGTACTGAGGGGCATCTGTCAGCAGGCCATTACTATCCCCCTTGTCCACAGCCAGAACTAACTCTAGGCGCAACCAAACATGCTGATAATGCCTTCCTTACTGTTCTTCTGCAAGACCATATTGGTGGTCTTCAAGTCCTTCACCAGAACAAGTGGTTTGATGTACCCCCCGTGCACGGTGCTCTTGTGGTTAATATTGGAGATCTTCTGCAGGAAAGTATATATAAGGATTATTCTTCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2OG-FeII_Oxy DIOX_N

Protein Analysis

669

Amino Acids

75.19

Weight (kDa)

5.17

Isoelectric Point (pI)

35.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 66 - 168 2.1e-20 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 212 - 304 1.8e-30 2OG-Fe(II) oxygenase superfamily
DIOX_N PF14226 439 - 542 4.2e-20 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 597 - 659 5.5e-20 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000054)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03400 AT1G03400 AT1G03410 AT1G03410 AT1G04350 AT1G06620 AT1G06620 AT1G06640 AT1G06640 AT1G06640 AT1G06645 AT1G06650 AT1G06650 AT2G25450 AT2G30830 AT2G30840 AT2G30840 AT2G30840 AT3G61400 AT3G61400 AT5G43440 AT5G43440 AT5G43450 AT5G43450 AT5G59530 AT5G59540 AT5G59540
fragaria_vesca FvH4_2g03190 FvH4_2g03220 FvH4_3g07861 FvH4_3g31880 FvH4_3g31880 FvH4_3g31880 FvH4_4g03241 FvH4_4g03250 FvH4_4g03251 FvH4_4g03260 FvH4_4g03300 FvH4_4g03301 FvH4_4g03301 FvH4_4g03301 FvH4_4g03302 FvH4_4g03303 FvH4_4g03303 FvH4_4g03304 FvH4_4g03305 FvH4_4g03323 FvH4_4g03323 FvH4_5g19290 FvH4_5g19290 FvH4_5g19290 FvH4_5g19291 FvH4_5g19291 FvH4_5g19310 FvH4_5g19310 FvH4_5g19310 FvH4_5g19320 FvH4_5g19321 FvH4_5g19321 FvH4_5g19321 FvH4_7g31470
malus_domestica MD00G1220300.v1.1 MD02G1050800.v1.1 MD02G1053200.v1.1 MD02G1053300.v1.1 MD02G1054900.v1.1 MD03G1032300.v1.1 MD03G1245000.v1.1 MD03G1245300.v1.1 MD05G1014200.v1.1 MD13G1210900.v1.1 MD13G1211000.v1.1 MD13G1211100.v1.1 MD13G1211200.v1.1 MD13G1211800.v1.1 MD13G1211900.v1.1 MD13G1212000.v1.1 MD16G1214100.v1.1 MD16G1214300.v1.1 MD16G1214400.v1.1 MD16G1214600.v1.1 MD16G1215000.v1.1 MD16G1215200.v1.1 MD16G1215300.v1.1 MD16G1215500.v1.1 MD16G1271000.v1.1
prunus_persica Prupe.1G035500_v2.0.a1 Prupe.1G035700_v2.0.a1 Prupe.1G035800_v2.0.a1 Prupe.1G035900_v2.0.a1 Prupe.1G036000_v2.0.a1 Prupe.1G036100_v2.0.a1 Prupe.1G036200_v2.0.a1 Prupe.1G036400_v2.0.a1 Prupe.1G036500_v2.0.a1 Prupe.1G036600_v2.0.a1 Prupe.1G036700_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G191000_v2.0.a1 Prupe.1G191100_v2.0.a1
pyrus_communis pycom13g18340 pycom13g18350 pycom13g18380 pycom16g17990 pycom16g18010 pycom16g18020
rosa_chinensis RchiOBHm_Chr2g0124051 RchiOBHm_Chr4g0391811 RchiOBHm_Chr4g0391931 RchiOBHm_Chr4g0391961 RchiOBHm_Chr4g0391971 RchiOBHm_Chr4g0391981 RchiOBHm_Chr4g0391991 RchiOBHm_Chr4g0392031 RchiOBHm_Chr4g0392051 RchiOBHm_Chr4g0392061 RchiOBHm_Chr4g0392071 RchiOBHm_Chr4g0392081 RchiOBHm_Chr4g0392091 RchiOBHm_Chr4g0392111 RchiOBHm_Chr4g0392121 RchiOBHm_Chr4g0392131 RchiOBHm_Chr4g0392141 RchiOBHm_Chr4g0392151 RchiOBHm_Chr4g0392211 RchiOBHm_Chr4g0392251 RchiOBHm_Chr4g0392261 RchiOBHm_Chr4g0392301 RchiOBHm_Chr4g0392311 RchiOBHm_Chr4g0392341 RchiOBHm_Chr4g0409221 RchiOBHm_Chr4g0410991 RchiOBHm_Chr4g0429131 RchiOBHm_Chr4g0437051 RchiOBHm_Chr5g0038681 RchiOBHm_Chr5g0047071 RchiOBHm_Chr5g0058651 RchiOBHm_Chr6g0248121 RchiOBHm_Chr6g0248141 RchiOBHm_Chr6g0248291 RchiOBHm_Chr6g0248341 RchiOBHm_Chr6g0248351
rosa_laevigata RLG00000006473 RLG00000006475 RLG00000006667 RLG00000007095 RLG00000009819 RLG00000009820 RLG00000009821 RLG00000009822 RLG00000009825 RLG00000009826 RLG00000009830 RLG00000009831 RLG00000009832 RLG00000009833 RLG00000009834 RLG00000009835 RLG00000009837 RLG00000009838 RLG00000009839 RLG00000009841 RLG00000009842 RLG00000009844 RLG00000009845 RLG00000009846 RLG00000009847 RLG00000009848 RLG00000009849 RLG00000015160 RLG00000015161 RLG00000017791 RLG00000018779 RLG00000034461 RLG00000035237
rosa_multiflora Rmu_co8253791.1_g000001 Rmu_co8348827.1_g000001 Rmu_co8400489.1_g000001 Rmu_sc0000383.1_g000003 Rmu_sc0000383.1_g000005 Rmu_sc0000383.1_g000026 Rmu_sc0000846.1_g000012 Rmu_sc0001231.1_g000013 Rmu_sc0001231.1_g000026 Rmu_sc0001231.1_g000028 Rmu_sc0001800.1_g000027 Rmu_sc0003436.1_g000022 Rmu_sc0004104.1_g000004 Rmu_sc0004295.1_g000021 Rmu_sc0004295.1_g000031 Rmu_sc0004928.1_g000002 Rmu_sc0004928.1_g000008 Rmu_sc0004928.1_g000011 Rmu_sc0004928.1_g000027 Rmu_sc0004977.1_g000007 Rmu_sc0005018.1_g000002 Rmu_sc0005091.1_g000026 Rmu_sc0005091.1_g000032 Rmu_sc0005091.1_g000033 Rmu_sc0005817.1_g000003 Rmu_sc0005817.1_g000008 Rmu_sc0012482.1_g000002 Rmu_sc0014210.1_g000001 Rmu_sc0016150.1_g000001 Rmu_sc0029701.1_g000002 Rmu_sc0036585.1_g000001 Rmu_sc0037489.1_g000002
rosa_roxburghii Rroxscaffold_1G00021790 Rroxscaffold_1G00021800 Rroxscaffold_1G00034360 Rroxscaffold_2G00120130 Rroxscaffold_5G00337210 Rroxscaffold_5G00337220 Rroxscaffold_5G00337230 Rroxscaffold_5G00337250 Rroxscaffold_5G00337260 Rroxscaffold_5G00337270 Rroxscaffold_5G00337300 Rroxscaffold_5G00337310 Rroxscaffold_5G00337320 Rroxscaffold_5G00337330 Rroxscaffold_5G00337350 Rroxscaffold_5G00337370 Rroxscaffold_5G00337390 Rroxscaffold_5G00337400 Rroxscaffold_5G00337420 Rroxscaffold_5G00337430 Rroxscaffold_5G00337450 Rroxscaffold_5G00337470 Rroxscaffold_5G00337480 Rroxscaffold_5G00337520 Rroxscaffold_5G00378130 Rroxscaffold_6G00397800 Rroxscaffold_7G00213320 Rroxscaffold_7G00213390 Rroxscaffold_7G00213420 Rroxscaffold_7G00213470
rosa_rugosa Rorug02G0070100 Rorug02G0070100 Rorug02G0070100 Rorug02G0128600 Rorug02G0128700 Rorug02G0128800 Rorug02G0128900 Rorug02G0248400 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337100 Rorug03G0337200 Rorug03G0337300 Rorug03G0337600 Rorug03G0337700 Rorug03G0337800 Rorug03G0337900 Rorug03G0337900 Rorug03G0338000 Rorug03G0338100 Rorug03G0338200 Rorug04G0233200.1 Rorug04G0297900 Rorug05G0233700 Rorug05G0316700 Rorug05G0530800 Rorug05G0530900
rosa_samantha Rh2AG307400 Rh2BG316500 Rh2DG331200 Rh4AG039300 Rh4AG039400 Rh4AG039600 Rh4AG039700 Rh4AG039900 Rh4AG040000 Rh4AG040100 Rh4AG040300 Rh4AG040500 Rh4AG040700 Rh4AG041000 Rh4AG041100 Rh4AG041600 Rh4AG041800 Rh4AG041900 Rh4AG352400 Rh4BG033200 Rh4BG034100 Rh4BG034300 Rh4BG034700 Rh4BG034800 Rh4BG035200 Rh4BG035400 Rh4BG036000 Rh4BG036200 Rh4BG036300 Rh4BG036500 Rh4BG036800 Rh4BG361700 Rh4CG042000 Rh4CG042200 Rh4CG042300 Rh4CG042500 Rh4CG042600 Rh4CG042800 Rh4CG043200 Rh4CG043400 Rh4CG043500 Rh4CG043700 Rh4CG043800 Rh4CG044200 Rh4CG044500 Rh4CG044700 Rh4CG177000 Rh4CG310600 Rh4CG376000 Rh4DG036300 Rh4DG036900 Rh4DG037000 Rh4DG037100 Rh4DG037200 Rh4DG037300 Rh4DG037500 Rh4DG037700 Rh4DG037800 Rh4DG037900 Rh4DG038000 Rh4DG038200 Rh4DG038500 Rh4DG038700 Rh4DG038900 Rh4DG159600 Rh5CG347900 Rh5DG409900 Rh6AG045300 Rh6AG045800 Rh6AG046000 Rh6AG046100 Rh6BG040600 Rh6BG040700 Rh6BG042200 Rh6BG042700 Rh6BG042800 Rh6DG035900 Rh6DG036100 Rh6DG036200
rosa_wichuraiana Rw0G010420 Rw2G024780 Rw4G003020 Rw4G003070 Rw4G003080 Rw4G003090 Rw4G003100 Rw4G003130 Rw4G003140 Rw4G003150 Rw4G003180 Rw4G003190 Rw4G003200 Rw4G003210 Rw4G003220 Rw4G003240 Rw4G003270 Rw4G025050 Rw4G030850 Rw6G003930 Rw6G004000 Rw6G004030 Rw6G004040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 788
AccI GTMKAC 1 cut(s) 255
AccII CGCG 1 cut(s) 1518
AclWI GGATC 2 cut(s) 221, 1286
AcsI RAATTY 1 cut(s) 1140
AcuI CTGAAG 2 cut(s) 393, 1743
AfiI CCNNNNNNNGG 2 cut(s) 983, 1940
AhdI GACNNNNNGTC 1 cut(s) 1717
AjnI CCWGG 1 cut(s) 784
AjuI GAANNNNNNNTTGG 2 cut(s) 1299, 1331
Alw21I GWGCWC 6 cut(s) 454, 858, 1080, 1573, 1941, 1948
Alw26I GTCTC 3 cut(s) 1208, 1377, 1388
Alw44I GTGCAC 3 cut(s) 450, 1569, 1937
AlwI GGATC 2 cut(s) 221, 1286
AoxI GGCC 6 cut(s) 91, 217, 637, 1255, 1336, 1789
ApaLI GTGCAC 3 cut(s) 450, 1569, 1937
ApeKI GCWGC 2 cut(s) 5, 527
ApoI RAATTY 1 cut(s) 1140
AspA2I CCTAGG 1 cut(s) 1106
AspLEI GCGC 1 cut(s) 1835
AspS9I GGNCC 8 cut(s) 217, 346, 881, 944, 1103, 1166, 1465, 1678
AsuC2I CCSGG 1 cut(s) 1033
AsuHPI GGTGA 2 cut(s) 1507, 1898
AvaII GGWCC 7 cut(s) 346, 881, 944, 1103, 1166, 1465, 1678
AvrII CCTAGG 1 cut(s) 1106
BaeGI GKGCMC 3 cut(s) 454, 1573, 1941
BaeI ACNNNNGTAYC 2 cut(s) 360, 393
BanI GGYRCC 1 cut(s) 788
BauI CACGAG 1 cut(s) 396
BbsI GAAGAC 4 cut(s) 734, 1197, 1641, 1886
Bbv12I GWGCWC 6 cut(s) 454, 858, 1080, 1573, 1941, 1948
BbvI GCAGC 2 cut(s) 17, 539
BccI CCATC 4 cut(s) 335, 956, 1156, 1283
BciT130I CCWGG 1 cut(s) 786
BciVI GTATCC 1 cut(s) 466
BcnI CCSGG 1 cut(s) 1033
BcoDI GTCTC 3 cut(s) 1208, 1377, 1388
BfaI CTAG 3 cut(s) 1004, 1107, 1829
BfmI CTRYAG 2 cut(s) 406, 1973
BfuI GTATCC 1 cut(s) 466
BglII AGATCT 2 cut(s) 811, 1966
BisI GCNGC 2 cut(s) 6, 528
BlnI CCTAGG 1 cut(s) 1106
BlsI GCNGC 2 cut(s) 7, 529
BmcAI AGTACT 3 cut(s) 152, 1271, 1673
Bme1390I CCNGG 2 cut(s) 786, 1033
Bme18I GGWCC 7 cut(s) 346, 881, 944, 1103, 1166, 1465, 1678
BmeRI GACNNNNNGTC 1 cut(s) 1717
BmgT120I GGNCC 8 cut(s) 217, 346, 881, 944, 1103, 1166, 1465, 1678
BmiI GGNNCC 6 cut(s) 347, 790, 946, 988, 1466, 1614
BmrFI CCNGG 2 cut(s) 786, 1033
BmsI GCATC 5 cut(s) 91, 117, 278, 1397, 1786
BpiI GAAGAC 4 cut(s) 734, 1197, 1641, 1886
BplI GAGNNNNNCTC 2 cut(s) 1472, 1504
BpuEI CTTGAG 2 cut(s) 197, 347
BpuMI CCSGG 1 cut(s) 1033
BsaJI CCNNGG 4 cut(s) 349, 805, 1106, 1423
BsaXI ACNNNNNCTCC 2 cut(s) 484, 514
Bsc4I CCNNNNNNNGG 2 cut(s) 983, 1940
Bse118I RCCGGY 1 cut(s) 1573
Bse1I ACTGG 6 cut(s) 200, 455, 767, 870, 1092, 1319
BseBI CCWGG 1 cut(s) 786
BseDI CCNNGG 4 cut(s) 349, 805, 1106, 1423
BseGI GGATG 3 cut(s) 136, 346, 1275
BseLI CCNNNNNNNGG 2 cut(s) 983, 1940
BseMII CTCAG 4 cut(s) 128, 561, 1482, 1761
BseNI ACTGG 6 cut(s) 200, 455, 767, 870, 1092, 1319
BseRI GAGGAG 1 cut(s) 344
BseSI GKGCMC 3 cut(s) 454, 1573, 1941
BseXI GCAGC 2 cut(s) 17, 539
BsgI GTGCAG 1 cut(s) 1672
Bsh1236I CGCG 1 cut(s) 1518
BshFI GGCC 6 cut(s) 93, 219, 639, 1257, 1338, 1791
BshNI GGYRCC 1 cut(s) 788
BsiHKAI GWGCWC 6 cut(s) 454, 858, 1080, 1573, 1941, 1948
BsiSI CCGG 2 cut(s) 1032, 1574
BslFI GGGAC 1 cut(s) 1241
BslI CCNNNNNNNGG 2 cut(s) 983, 1940
BsmAI GTCTC 3 cut(s) 1208, 1377, 1388
BsmBI CGTCTC 1 cut(s) 1377
BsmFI GGGAC 1 cut(s) 1241
BsmI GAATGC 3 cut(s) 195, 924, 1314
BsnI GGCC 6 cut(s) 93, 219, 639, 1257, 1338, 1791
Bsp1286I GDGCHC 6 cut(s) 454, 858, 1080, 1573, 1941, 1948
Bsp143I GATC 9 cut(s) 226, 246, 439, 811, 1291, 1327, 1519, 1558, 1966
Bsp19I CCATGG 1 cut(s) 1423
Bsp68I TCGCGA 1 cut(s) 1518
BspANI GGCC 6 cut(s) 93, 219, 639, 1257, 1338, 1791
BspCNI CTCAG 4 cut(s) 127, 562, 1483, 1762
BspFNI CGCG 1 cut(s) 1518
BspLI GGNNCC 6 cut(s) 347, 790, 946, 988, 1466, 1614
BspMAI CTGCAG 1 cut(s) 1977
BspPI GGATC 2 cut(s) 221, 1286
BspQI GCTCTTC 1 cut(s) 1008
BspT107I GGYRCC 1 cut(s) 788
BsrFI RCCGGY 1 cut(s) 1573
BsrI ACTGG 6 cut(s) 200, 455, 767, 870, 1092, 1319
BssAI RCCGGY 1 cut(s) 1573
BssECI CCNNGG 4 cut(s) 349, 805, 1106, 1423
BssMI GATC 9 cut(s) 226, 246, 439, 811, 1291, 1327, 1519, 1558, 1966
BssSI CACGAG 1 cut(s) 396
BssT1I CCWWGG 3 cut(s) 805, 1106, 1423
Bst2BI CACGAG 1 cut(s) 396
Bst2UI CCWGG 1 cut(s) 786
Bst4CI ACNGT 7 cut(s) 189, 387, 410, 875, 1222, 1867, 1943
Bst6I CTCTTC 2 cut(s) 1008, 1443
BstC8I GCNNGC 6 cut(s) 106, 689, 693, 901, 1123, 1789
BstDEI CTNAG 7 cut(s) 114, 504, 570, 793, 1491, 1626, 1770
BstDSI CCRYGG 2 cut(s) 349, 1423
BstENI CCTNNNNNAGG 1 cut(s) 981
BstF5I GGATG 3 cut(s) 136, 346, 1275
BstFNI CGCG 1 cut(s) 1518
BstHHI GCGC 1 cut(s) 1835
BstKTI GATC 9 cut(s) 229, 249, 442, 814, 1294, 1330, 1522, 1561, 1969
BstMAI GTCTC 3 cut(s) 1208, 1377, 1388
BstMBI GATC 9 cut(s) 226, 246, 439, 811, 1291, 1327, 1519, 1558, 1966
BstMWI GCNNNNNNNGC 4 cut(s) 110, 909, 1131, 1853
BstNI CCWGG 1 cut(s) 786
BstNSI RCATGY 2 cut(s) 695, 1847
BstSCI CCNGG 2 cut(s) 784, 1031
BstSFI CTRYAG 2 cut(s) 406, 1973
BstSLI GKGCMC 3 cut(s) 454, 1573, 1941
BstUI CGCG 1 cut(s) 1518
BstV1I GCAGC 2 cut(s) 17, 539
BstV2I GAAGAC 4 cut(s) 734, 1197, 1641, 1886
BstX2I RGATCY 3 cut(s) 226, 811, 1966
BstXI CCANNNNNNTGG 1 cut(s) 1889
BstYI RGATCY 3 cut(s) 226, 811, 1966
BsuI GTATCC 1 cut(s) 466
BsuRI GGCC 6 cut(s) 93, 219, 639, 1257, 1338, 1791
BtgI CCRYGG 2 cut(s) 349, 1423
BtgZI GCGATG 1 cut(s) 94
BtsCI GGATG 3 cut(s) 136, 346, 1275
BtsI GCAGTG 1 cut(s) 622
BtsIMutI CAGTG 3 cut(s) 462, 622, 1294
BtuMI TCGCGA 1 cut(s) 1518
Cac8I GCNNGC 6 cut(s) 106, 689, 693, 901, 1123, 1789
CfoI GCGC 1 cut(s) 1835
Cfr10I RCCGGY 1 cut(s) 1573
Cfr13I GGNCC 8 cut(s) 217, 346, 881, 944, 1103, 1166, 1465, 1678
CseI GACGC 1 cut(s) 1394
CsiI ACCWGGT 1 cut(s) 784
CviAII CATG 8 cut(s) 305, 490, 692, 779, 1280, 1424, 1609, 1844
DdeI CTNAG 7 cut(s) 114, 504, 570, 793, 1491, 1626, 1770
DpnI GATC 9 cut(s) 228, 248, 441, 813, 1293, 1329, 1521, 1560, 1968
DpnII GATC 9 cut(s) 226, 246, 439, 811, 1291, 1327, 1519, 1558, 1966
DriI GACNNNNNGTC 1 cut(s) 1717
Eam1104I CTCTTC 2 cut(s) 1008, 1443
Eam1105I GACNNNNNGTC 1 cut(s) 1717
EarI CTCTTC 2 cut(s) 1008, 1443
Eco130I CCWWGG 3 cut(s) 805, 1106, 1423
Eco147I AGGCCT 3 cut(s) 93, 1257, 1338
Eco47I GGWCC 7 cut(s) 346, 881, 944, 1103, 1166, 1465, 1678
Eco57I CTGAAG 2 cut(s) 393, 1743
EcoNI CCTNNNNNAGG 1 cut(s) 981
EcoO109I RGGNCCY 2 cut(s) 217, 1103
EcoRI GAATTC 1 cut(s) 1140
EcoRII CCWGG 1 cut(s) 784
EcoT14I CCWWGG 3 cut(s) 805, 1106, 1423
ErhI CCWWGG 3 cut(s) 805, 1106, 1423
Esp3I CGTCTC 1 cut(s) 1377
FaeI CATG 8 cut(s) 308, 493, 695, 782, 1283, 1427, 1612, 1847
FaqI GGGAC 1 cut(s) 1241
FatI CATG 8 cut(s) 304, 489, 691, 778, 1279, 1423, 1608, 1843
FblI GTMKAC 1 cut(s) 255
Fnu4HI GCNGC 2 cut(s) 6, 528
FokI GGATG 3 cut(s) 123, 353, 1262
Fsp4HI GCNGC 2 cut(s) 6, 528
FspBI CTAG 3 cut(s) 1004, 1107, 1829
GlaI GCGC 1 cut(s) 1834
GluI GCNGC 2 cut(s) 6, 528
HaeIII GGCC 6 cut(s) 93, 219, 639, 1257, 1338, 1791
HapII CCGG 2 cut(s) 1032, 1574
HgaI GACGC 1 cut(s) 1394
HhaI GCGC 1 cut(s) 1835
Hin1II CATG 8 cut(s) 308, 493, 695, 782, 1283, 1427, 1612, 1847
Hin6I GCGC 1 cut(s) 1833
HinP1I GCGC 1 cut(s) 1833
HincII GTYRAC 2 cut(s) 802, 1420
HindII GTYRAC 2 cut(s) 802, 1420
HindIII AAGCTT 3 cut(s) 60, 901, 1123
HpaI GTTAAC 1 cut(s) 802
HpaII CCGG 2 cut(s) 1032, 1574
HphI GGTGA 2 cut(s) 1507, 1898
Hpy166II GTNNAC 9 cut(s) 53, 256, 452, 659, 802, 1420, 1571, 1811, 1939
Hpy188III TCNNGA 6 cut(s) 398, 844, 1295, 1331, 1445, 1517
Hpy8I GTNNAC 9 cut(s) 53, 256, 452, 659, 802, 1420, 1571, 1811, 1939
HpyAV CCTTC 4 cut(s) 74, 1328, 1867, 1913
HpyCH4III ACNGT 7 cut(s) 189, 387, 410, 875, 1222, 1867, 1943
HpyCH4IV ACGT 1 cut(s) 258
HpyF10VI GCNNNNNNNGC 4 cut(s) 110, 909, 1131, 1853
HpyF3I CTNAG 7 cut(s) 114, 504, 570, 793, 1491, 1626, 1770
HpySE526I ACGT 1 cut(s) 258
Hsp92II CATG 8 cut(s) 308, 493, 695, 782, 1283, 1427, 1612, 1847
HspAI GCGC 1 cut(s) 1833
KspAI GTTAAC 1 cut(s) 802
Kzo9I GATC 9 cut(s) 226, 246, 439, 811, 1291, 1327, 1519, 1558, 1966
LguI GCTCTTC 1 cut(s) 1008
LmnI GCTCC 1 cut(s) 1618
Lsp1109I GCAGC 2 cut(s) 17, 539
LweI GCATC 5 cut(s) 91, 117, 278, 1397, 1786
MabI ACCWGGT 1 cut(s) 784
MaeI CTAG 3 cut(s) 1004, 1107, 1829
MaeII ACGT 1 cut(s) 258
MaeIII GTNAC 4 cut(s) 457, 485, 1604, 1745
MalI GATC 9 cut(s) 228, 248, 441, 813, 1293, 1329, 1521, 1560, 1968
MboI GATC 9 cut(s) 226, 246, 439, 811, 1291, 1327, 1519, 1558, 1966
MflI RGATCY 3 cut(s) 226, 811, 1966
MhlI GDGCHC 6 cut(s) 454, 858, 1080, 1573, 1941, 1948
MluCI AATT 5 cut(s) 294, 463, 668, 1140, 1582
MlyI GAGTC 3 cut(s) 284, 487, 1481
MmeI TCCRAC 3 cut(s) 254, 1360, 1640
MseI TTAA 6 cut(s) 159, 336, 671, 801, 1956, 2005
MslI CAYNNNNRTG 4 cut(s) 600, 917, 1752, 1887
MspI CCGG 2 cut(s) 1032, 1574
MspR9I CCNGG 2 cut(s) 786, 1033
Mva1269I GAATGC 3 cut(s) 195, 924, 1314
MvaI CCWGG 1 cut(s) 786
MvnI CGCG 1 cut(s) 1518
MwoI GCNNNNNNNGC 4 cut(s) 110, 909, 1131, 1853
NciI CCSGG 1 cut(s) 1033
NcoI CCATGG 1 cut(s) 1423
NdeII GATC 9 cut(s) 226, 246, 439, 811, 1291, 1327, 1519, 1558, 1966
NlaIII CATG 8 cut(s) 308, 493, 695, 782, 1283, 1427, 1612, 1847
NlaIV GGNNCC 6 cut(s) 347, 790, 946, 988, 1466, 1614
NmuCI GTSAC 2 cut(s) 457, 1745
NruI TCGCGA 1 cut(s) 1518
NspI RCATGY 2 cut(s) 695, 1847
PaeI GCATGC 1 cut(s) 695
PceI AGGCCT 3 cut(s) 93, 1257, 1338
PciSI GCTCTTC 1 cut(s) 1008
PcsI WCGNNNNNNNCGW 1 cut(s) 255
PctI GAATGC 3 cut(s) 195, 924, 1314
PfeI GAWTC 7 cut(s) 118, 126, 173, 840, 1062, 1346, 1531
PkrI GCNGC 2 cut(s) 7, 529
PleI GAGTC 3 cut(s) 283, 487, 1481
PpsI GAGTC 3 cut(s) 283, 487, 1481
PpuMI RGGWCCY 1 cut(s) 1103
Psp5II RGGWCCY 1 cut(s) 1103
Psp6I CCWGG 1 cut(s) 784
PspGI CCWGG 1 cut(s) 784
PspN4I GGNNCC 6 cut(s) 347, 790, 946, 988, 1466, 1614
PspPI GGNCC 8 cut(s) 217, 346, 881, 944, 1103, 1166, 1465, 1678
PspPPI RGGWCCY 1 cut(s) 1103
PstI CTGCAG 1 cut(s) 1977
PsuI RGATCY 3 cut(s) 226, 811, 1966
RruI TCGCGA 1 cut(s) 1518
RseI CAYNNNNRTG 4 cut(s) 600, 917, 1752, 1887
SapI GCTCTTC 1 cut(s) 1008
SaqAI TTAA 6 cut(s) 159, 336, 671, 801, 1956, 2005
SatI GCNGC 2 cut(s) 6, 528
Sau3AI GATC 9 cut(s) 226, 246, 439, 811, 1291, 1327, 1519, 1558, 1966
Sau96I GGNCC 8 cut(s) 217, 346, 881, 944, 1103, 1166, 1465, 1678
ScaI AGTACT 3 cut(s) 152, 1271, 1673
SchI GAGTC 3 cut(s) 284, 487, 1481
ScrFI CCNGG 2 cut(s) 786, 1033
SduI GDGCHC 6 cut(s) 454, 858, 1080, 1573, 1941, 1948
SexAI ACCWGGT 1 cut(s) 784
SfaNI GCATC 5 cut(s) 91, 117, 278, 1397, 1786
SfcI CTRYAG 2 cut(s) 406, 1973
SgrAI CRCCGGYG 1 cut(s) 1573
SinI GGWCC 7 cut(s) 346, 881, 944, 1103, 1166, 1465, 1678
SmiMI CAYNNNNRTG 4 cut(s) 600, 917, 1752, 1887
SmlI CTYRAG 2 cut(s) 212, 326
SmoI CTYRAG 2 cut(s) 212, 326
SphI GCATGC 1 cut(s) 695
Sse9I AATT 5 cut(s) 294, 463, 668, 1140, 1582
SseBI AGGCCT 3 cut(s) 93, 1257, 1338
SspI AATATT 2 cut(s) 733, 1960
SspMI CTAG 3 cut(s) 1004, 1107, 1829
StuI AGGCCT 3 cut(s) 93, 1257, 1338
StyD4I CCNGG 2 cut(s) 784, 1031
StyI CCWWGG 3 cut(s) 805, 1106, 1423
TaaI ACNGT 7 cut(s) 189, 387, 410, 875, 1222, 1867, 1943
TaiI ACGT 1 cut(s) 261
TaqI TCGA 3 cut(s) 124, 1151, 1710
TasI AATT 5 cut(s) 294, 463, 668, 1140, 1582
TatI WGTACW 5 cut(s) 150, 1206, 1269, 1671, 1766
TfiI GAWTC 7 cut(s) 118, 126, 173, 840, 1062, 1346, 1531
Tru1I TTAA 6 cut(s) 159, 336, 671, 801, 1956, 2005
Tru9I TTAA 6 cut(s) 159, 336, 671, 801, 1956, 2005
TscAI CASTG 3 cut(s) 462, 622, 1294
TseFI GTSAC 2 cut(s) 457, 1745
TseI GCWGC 2 cut(s) 5, 527
Tsp45I GTSAC 2 cut(s) 457, 1745
TspDTI ATGAA 4 cut(s) 551, 697, 743, 1703
TspGWI ACGGA 3 cut(s) 338, 1179, 1457
TspRI CASTG 3 cut(s) 462, 622, 1294
VneI GTGCAC 3 cut(s) 450, 1569, 1937
VpaK11BI GGWCC 7 cut(s) 346, 881, 944, 1103, 1166, 1465, 1678
XagI CCTNNNNNAGG 1 cut(s) 981
XapI RAATTY 1 cut(s) 1140
XceI RCATGY 2 cut(s) 695, 1847
XcmI CCANNNNNNNNNTGG 1 cut(s) 462
XmaJI CCTAGG 1 cut(s) 1106
XmiI GTMKAC 1 cut(s) 255
XspI CTAG 3 cut(s) 1004, 1107, 1829
ZrmI AGTACT 3 cut(s) 152, 1271, 1673
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.