RchiOBHm_Chr4g0409221

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Forward (+)
32459286 .. 32460901
1616 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ38027

Sequence Viewer

Length: 798 bp
ATGTATGATATGATGATGTGTGATACATGCACTCCGTGGCCTGATGATAGAAAACCTGAACTAAAAGCTTTTGATGATAAAAAAGAAGGTGTTAAAGGCCTTGTAGATGCTGGCATAACCGAAATTCCTCGAATTTTTTTATCATCCACTGATCCACCTGAAGAATGCTCCATTGACAATACCTCTGGTTCAGAAGAAGTCCAGTTTAGCATTCTGATTGTTGCAGATGTTGGAGAAGCATCAGAGACGTGGGGATTCTTTCAAATTTCCAATCATGGAATACCTTTTGATGTGCTAGAGGAGATGAAGGACGGGGTACGTGGGTTTCATGAGCAGGATACTGAAGTGAAGAAACAGTTTTATAATCGTGATGACTCCAGTAGTCCATTCGTCTACAACAGCAACTTTGATTTGTATAGTGCACCGACAACTAATTGGAGGGATAGTTTTTTGTGTCATATGGCTCCTACTCCTCCTAAGACAGAAGACTTGCCAAAAGTATGCAGAGAAATCCTTGTTGAATACTCGAAGCAAGTAATGAAGTTGGGGAAGCTATTGTTTGAGTTGTTGTCTGAGGCTCTTGGGTTAAAACTAACTCACTTGAATGATATAGATTGCAGTGAGGGGCTTCTGGTTTTAGGCCATTACTATCCTGCTTGTCCACAACCAGAATTAACAATAGGCACAAGCAAGATAATATTGGTGGTCTTCAAGTCCTCCTGCAAGATAATATTGGTGGTCTTCAAGTCCTTCATCAGAACAACTCGATTGACGTACCCTATGTACCGGGTGCCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

265

Amino Acids

30.06

Weight (kDa)

4.86

Isoelectric Point (pI)

44.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 73 - 157 7.6e-14 non-haem dioxygenase in morphine synthesis N-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000054)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03400 AT1G03400 AT1G03410 AT1G03410 AT1G04350 AT1G06620 AT1G06620 AT1G06640 AT1G06640 AT1G06640 AT1G06645 AT1G06650 AT1G06650 AT2G25450 AT2G30830 AT2G30840 AT2G30840 AT2G30840 AT3G61400 AT3G61400 AT5G43440 AT5G43440 AT5G43450 AT5G43450 AT5G59530 AT5G59540 AT5G59540
fragaria_vesca FvH4_2g03190 FvH4_2g03220 FvH4_3g07861 FvH4_3g31880 FvH4_3g31880 FvH4_3g31880 FvH4_4g03241 FvH4_4g03250 FvH4_4g03251 FvH4_4g03260 FvH4_4g03300 FvH4_4g03301 FvH4_4g03301 FvH4_4g03301 FvH4_4g03302 FvH4_4g03303 FvH4_4g03303 FvH4_4g03304 FvH4_4g03305 FvH4_4g03323 FvH4_4g03323 FvH4_5g19290 FvH4_5g19290 FvH4_5g19290 FvH4_5g19291 FvH4_5g19291 FvH4_5g19310 FvH4_5g19310 FvH4_5g19310 FvH4_5g19320 FvH4_5g19321 FvH4_5g19321 FvH4_5g19321 FvH4_7g31470
malus_domestica MD00G1220300.v1.1 MD02G1050800.v1.1 MD02G1053200.v1.1 MD02G1053300.v1.1 MD02G1054900.v1.1 MD03G1032300.v1.1 MD03G1245000.v1.1 MD03G1245300.v1.1 MD05G1014200.v1.1 MD13G1210900.v1.1 MD13G1211000.v1.1 MD13G1211100.v1.1 MD13G1211200.v1.1 MD13G1211800.v1.1 MD13G1211900.v1.1 MD13G1212000.v1.1 MD16G1214100.v1.1 MD16G1214300.v1.1 MD16G1214400.v1.1 MD16G1214600.v1.1 MD16G1215000.v1.1 MD16G1215200.v1.1 MD16G1215300.v1.1 MD16G1215500.v1.1 MD16G1271000.v1.1
prunus_persica Prupe.1G035500_v2.0.a1 Prupe.1G035700_v2.0.a1 Prupe.1G035800_v2.0.a1 Prupe.1G035900_v2.0.a1 Prupe.1G036000_v2.0.a1 Prupe.1G036100_v2.0.a1 Prupe.1G036200_v2.0.a1 Prupe.1G036400_v2.0.a1 Prupe.1G036500_v2.0.a1 Prupe.1G036600_v2.0.a1 Prupe.1G036700_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G191000_v2.0.a1 Prupe.1G191100_v2.0.a1
pyrus_communis pycom13g18340 pycom13g18350 pycom13g18380 pycom16g17990 pycom16g18010 pycom16g18020
rosa_chinensis RchiOBHm_Chr2g0124051 RchiOBHm_Chr4g0391811 RchiOBHm_Chr4g0391931 RchiOBHm_Chr4g0391961 RchiOBHm_Chr4g0391971 RchiOBHm_Chr4g0391981 RchiOBHm_Chr4g0391991 RchiOBHm_Chr4g0392031 RchiOBHm_Chr4g0392051 RchiOBHm_Chr4g0392061 RchiOBHm_Chr4g0392071 RchiOBHm_Chr4g0392081 RchiOBHm_Chr4g0392091 RchiOBHm_Chr4g0392111 RchiOBHm_Chr4g0392121 RchiOBHm_Chr4g0392131 RchiOBHm_Chr4g0392141 RchiOBHm_Chr4g0392151 RchiOBHm_Chr4g0392211 RchiOBHm_Chr4g0392251 RchiOBHm_Chr4g0392261 RchiOBHm_Chr4g0392301 RchiOBHm_Chr4g0392311 RchiOBHm_Chr4g0392341 RchiOBHm_Chr4g0409221 RchiOBHm_Chr4g0410991 RchiOBHm_Chr4g0429131 RchiOBHm_Chr4g0437051 RchiOBHm_Chr5g0038681 RchiOBHm_Chr5g0047071 RchiOBHm_Chr5g0058651 RchiOBHm_Chr6g0248121 RchiOBHm_Chr6g0248141 RchiOBHm_Chr6g0248291 RchiOBHm_Chr6g0248341 RchiOBHm_Chr6g0248351
rosa_laevigata RLG00000006473 RLG00000006475 RLG00000006667 RLG00000007095 RLG00000009819 RLG00000009820 RLG00000009821 RLG00000009822 RLG00000009825 RLG00000009826 RLG00000009830 RLG00000009831 RLG00000009832 RLG00000009833 RLG00000009834 RLG00000009835 RLG00000009837 RLG00000009838 RLG00000009839 RLG00000009841 RLG00000009842 RLG00000009844 RLG00000009845 RLG00000009846 RLG00000009847 RLG00000009848 RLG00000009849 RLG00000015160 RLG00000015161 RLG00000017791 RLG00000018779 RLG00000034461 RLG00000035237
rosa_multiflora Rmu_co8253791.1_g000001 Rmu_co8348827.1_g000001 Rmu_co8400489.1_g000001 Rmu_sc0000383.1_g000003 Rmu_sc0000383.1_g000005 Rmu_sc0000383.1_g000026 Rmu_sc0000846.1_g000012 Rmu_sc0001231.1_g000013 Rmu_sc0001231.1_g000026 Rmu_sc0001231.1_g000028 Rmu_sc0001800.1_g000027 Rmu_sc0003436.1_g000022 Rmu_sc0004104.1_g000004 Rmu_sc0004295.1_g000021 Rmu_sc0004295.1_g000031 Rmu_sc0004928.1_g000002 Rmu_sc0004928.1_g000008 Rmu_sc0004928.1_g000011 Rmu_sc0004928.1_g000027 Rmu_sc0004977.1_g000007 Rmu_sc0005018.1_g000002 Rmu_sc0005091.1_g000026 Rmu_sc0005091.1_g000032 Rmu_sc0005091.1_g000033 Rmu_sc0005817.1_g000003 Rmu_sc0005817.1_g000008 Rmu_sc0012482.1_g000002 Rmu_sc0014210.1_g000001 Rmu_sc0016150.1_g000001 Rmu_sc0029701.1_g000002 Rmu_sc0036585.1_g000001 Rmu_sc0037489.1_g000002
rosa_roxburghii Rroxscaffold_1G00021790 Rroxscaffold_1G00021800 Rroxscaffold_1G00034360 Rroxscaffold_2G00120130 Rroxscaffold_5G00337210 Rroxscaffold_5G00337220 Rroxscaffold_5G00337230 Rroxscaffold_5G00337250 Rroxscaffold_5G00337260 Rroxscaffold_5G00337270 Rroxscaffold_5G00337300 Rroxscaffold_5G00337310 Rroxscaffold_5G00337320 Rroxscaffold_5G00337330 Rroxscaffold_5G00337350 Rroxscaffold_5G00337370 Rroxscaffold_5G00337390 Rroxscaffold_5G00337400 Rroxscaffold_5G00337420 Rroxscaffold_5G00337430 Rroxscaffold_5G00337450 Rroxscaffold_5G00337470 Rroxscaffold_5G00337480 Rroxscaffold_5G00337520 Rroxscaffold_5G00378130 Rroxscaffold_6G00397800 Rroxscaffold_7G00213320 Rroxscaffold_7G00213390 Rroxscaffold_7G00213420 Rroxscaffold_7G00213470
rosa_rugosa Rorug02G0070100 Rorug02G0070100 Rorug02G0070100 Rorug02G0128600 Rorug02G0128700 Rorug02G0128800 Rorug02G0128900 Rorug02G0248400 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337100 Rorug03G0337200 Rorug03G0337300 Rorug03G0337600 Rorug03G0337700 Rorug03G0337800 Rorug03G0337900 Rorug03G0337900 Rorug03G0338000 Rorug03G0338100 Rorug03G0338200 Rorug04G0233200.1 Rorug04G0297900 Rorug05G0233700 Rorug05G0316700 Rorug05G0530800 Rorug05G0530900
rosa_samantha Rh2AG307400 Rh2BG316500 Rh2DG331200 Rh4AG039300 Rh4AG039400 Rh4AG039600 Rh4AG039700 Rh4AG039900 Rh4AG040000 Rh4AG040100 Rh4AG040300 Rh4AG040500 Rh4AG040700 Rh4AG041000 Rh4AG041100 Rh4AG041600 Rh4AG041800 Rh4AG041900 Rh4AG352400 Rh4BG033200 Rh4BG034100 Rh4BG034300 Rh4BG034700 Rh4BG034800 Rh4BG035200 Rh4BG035400 Rh4BG036000 Rh4BG036200 Rh4BG036300 Rh4BG036500 Rh4BG036800 Rh4BG361700 Rh4CG042000 Rh4CG042200 Rh4CG042300 Rh4CG042500 Rh4CG042600 Rh4CG042800 Rh4CG043200 Rh4CG043400 Rh4CG043500 Rh4CG043700 Rh4CG043800 Rh4CG044200 Rh4CG044500 Rh4CG044700 Rh4CG177000 Rh4CG310600 Rh4CG376000 Rh4DG036300 Rh4DG036900 Rh4DG037000 Rh4DG037100 Rh4DG037200 Rh4DG037300 Rh4DG037500 Rh4DG037700 Rh4DG037800 Rh4DG037900 Rh4DG038000 Rh4DG038200 Rh4DG038500 Rh4DG038700 Rh4DG038900 Rh4DG159600 Rh5CG347900 Rh5DG409900 Rh6AG045300 Rh6AG045800 Rh6AG046000 Rh6AG046100 Rh6BG040600 Rh6BG040700 Rh6BG042200 Rh6BG042700 Rh6BG042800 Rh6DG035900 Rh6DG036100 Rh6DG036200
rosa_wichuraiana Rw0G010420 Rw2G024780 Rw4G003020 Rw4G003070 Rw4G003080 Rw4G003090 Rw4G003100 Rw4G003130 Rw4G003140 Rw4G003150 Rw4G003180 Rw4G003190 Rw4G003200 Rw4G003210 Rw4G003220 Rw4G003240 Rw4G003270 Rw4G025050 Rw4G030850 Rw6G003930 Rw6G004000 Rw6G004030 Rw6G004040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 363
AccB1I GGYRCC 1 cut(s) 790
AccI GTMKAC 1 cut(s) 393
AclWI GGATC 1 cut(s) 146
AcsI RAATTY 3 cut(s) 123, 132, 264
AcuI CTGAAG 2 cut(s) 180, 363
AdeI CACNNNGTG 1 cut(s) 36
AfaI GTAC 3 cut(s) 318, 776, 785
AgsI TTSAA 5 cut(s) 263, 521, 604, 712, 745
AjiI CACGTC 1 cut(s) 249
AluBI AGCT 2 cut(s) 68, 553
AluI AGCT 2 cut(s) 68, 553
Alw21I GWGCWC 1 cut(s) 424
Alw26I GTCTC 1 cut(s) 239
Alw44I GTGCAC 1 cut(s) 420
AlwI GGATC 1 cut(s) 146
AoxI GGCC 3 cut(s) 38, 97, 640
ApaLI GTGCAC 1 cut(s) 420
ApoI RAATTY 3 cut(s) 123, 132, 264
AsuC2I CCSGG 1 cut(s) 788
BaeGI GKGCMC 1 cut(s) 424
BaeI ACNNNNGTAYC 4 cut(s) 308, 330, 341, 363
BanI GGYRCC 1 cut(s) 790
BbsI GAAGAC 3 cut(s) 492, 700, 733
Bbv12I GWGCWC 1 cut(s) 424
BciVI GTATCC 1 cut(s) 331
BcnI CCSGG 1 cut(s) 788
BcoDI GTCTC 1 cut(s) 239
BfaI CTAG 1 cut(s) 296
BfuI GTATCC 1 cut(s) 331
Bme1390I CCNGG 1 cut(s) 788
BmgBI CACGTC 1 cut(s) 249
BmiI GGNNCC 2 cut(s) 465, 792
BmrFI CCNGG 1 cut(s) 788
BmsI GCATC 2 cut(s) 97, 248
BpiI GAAGAC 3 cut(s) 492, 700, 733
BpmI CTGGAG 1 cut(s) 361
BpuMI CCSGG 1 cut(s) 788
BsaAI YACGTR 1 cut(s) 320
BsaJI CCNNGG 1 cut(s) 35
BsaXI ACNNNNNCTCC 4 cut(s) 16, 46, 430, 460
Bse1I ACTGG 2 cut(s) 202, 378
BseDI CCNNGG 1 cut(s) 35
BseGI GGATG 1 cut(s) 143
BseMII CTCAG 1 cut(s) 564
BseNI ACTGG 2 cut(s) 202, 378
BseRI GAGGAG 2 cut(s) 314, 462
BseSI GKGCMC 1 cut(s) 424
BshFI GGCC 3 cut(s) 40, 99, 642
BshNI GGYRCC 1 cut(s) 790
BsiHKAI GWGCWC 1 cut(s) 424
BsiSI CCGG 1 cut(s) 787
BsmAI GTCTC 1 cut(s) 239
BsmBI CGTCTC 1 cut(s) 239
BsmI GAATGC 2 cut(s) 170, 210
BsnI GGCC 3 cut(s) 40, 99, 642
Bsp1286I GDGCHC 1 cut(s) 424
Bsp143I GATC 1 cut(s) 151
BspANI GGCC 3 cut(s) 40, 99, 642
BspCNI CTCAG 1 cut(s) 565
BspHI TCATGA 1 cut(s) 328
BspLI GGNNCC 2 cut(s) 465, 792
BspPI GGATC 1 cut(s) 146
BspT107I GGYRCC 1 cut(s) 790
BsrI ACTGG 2 cut(s) 202, 378
BssECI CCNNGG 1 cut(s) 35
BssMI GATC 1 cut(s) 151
Bst4CI ACNGT 1 cut(s) 357
BstBAI YACGTR 1 cut(s) 320
BstC8I GCNNGC 1 cut(s) 112
BstDEI CTNAG 3 cut(s) 477, 573, 795
BstDSI CCRYGG 1 cut(s) 35
BstF5I GGATG 1 cut(s) 143
BstKTI GATC 1 cut(s) 154
BstMAI GTCTC 1 cut(s) 239
BstMBI GATC 1 cut(s) 151
BstNSI RCATGY 1 cut(s) 30
BstSCI CCNGG 1 cut(s) 786
BstSLI GKGCMC 1 cut(s) 424
BstV2I GAAGAC 3 cut(s) 492, 700, 733
BsuI GTATCC 1 cut(s) 331
BsuRI GGCC 3 cut(s) 40, 99, 642
BtgI CCRYGG 1 cut(s) 35
BtrI CACGTC 1 cut(s) 249
BtsCI GGATG 1 cut(s) 143
BtsI GCAGTG 1 cut(s) 625
BtsIMutI CAGTG 2 cut(s) 147, 625
Cac8I GCNNGC 1 cut(s) 112
CciI TCATGA 1 cut(s) 328
Csp6I GTAC 3 cut(s) 317, 775, 784
CviAII CATG 3 cut(s) 27, 275, 329
CviJI RGCY 8 cut(s) 40, 68, 99, 464, 553, 578, 628, 642
CviKI_1 RGCY 8 cut(s) 40, 68, 99, 464, 553, 578, 628, 642
CviQI GTAC 3 cut(s) 317, 775, 784
DdeI CTNAG 3 cut(s) 477, 573, 795
DpnI GATC 1 cut(s) 153
DpnII GATC 1 cut(s) 151
DraIII CACNNNGTG 1 cut(s) 36
Eco147I AGGCCT 1 cut(s) 99
Eco57I CTGAAG 2 cut(s) 180, 363
Esp3I CGTCTC 1 cut(s) 239
FaeI CATG 3 cut(s) 30, 278, 332
FatI CATG 3 cut(s) 26, 274, 328
FauNDI CATATG 1 cut(s) 459
FblI GTMKAC 1 cut(s) 393
FokI GGATG 1 cut(s) 130
FspBI CTAG 1 cut(s) 296
GsuI CTGGAG 1 cut(s) 361
HaeIII GGCC 3 cut(s) 40, 99, 642
HapII CCGG 1 cut(s) 787
Hin1II CATG 3 cut(s) 30, 278, 332
HindIII AAGCTT 1 cut(s) 66
HinfI GANTC 2 cut(s) 255, 374
HpaII CCGG 1 cut(s) 787
Hpy166II GTNNAC 3 cut(s) 394, 422, 662
Hpy188I TCNGA 5 cut(s) 193, 216, 244, 574, 758
Hpy188III TCNNGA 2 cut(s) 329, 368
Hpy8I GTNNAC 3 cut(s) 394, 422, 662
HpyAV CCTTC 3 cut(s) 80, 301, 760
HpyCH4III ACNGT 1 cut(s) 357
HpyCH4IV ACGT 3 cut(s) 248, 319, 773
HpyCH4V TGCA 6 cut(s) 30, 224, 422, 504, 618, 723
HpyF3I CTNAG 3 cut(s) 477, 573, 795
HpySE526I ACGT 3 cut(s) 248, 319, 773
Hsp92II CATG 3 cut(s) 30, 278, 332
Kzo9I GATC 1 cut(s) 151
LmnI GCTCC 2 cut(s) 173, 469
LweI GCATC 2 cut(s) 97, 248
MaeI CTAG 1 cut(s) 296
MaeII ACGT 3 cut(s) 248, 319, 773
MalI GATC 1 cut(s) 153
MboI GATC 1 cut(s) 151
MboII GAAGA 6 cut(s) 173, 206, 361, 497, 700, 733
MhlI GDGCHC 1 cut(s) 424
MluCI AATT 5 cut(s) 123, 132, 264, 433, 671
MlyI GAGTC 1 cut(s) 368
MmeI TCCRAC 1 cut(s) 211
MnlI CCTC 8 cut(s) 138, 193, 292, 432, 483, 568, 616, 727
MseI TTAA 3 cut(s) 93, 587, 674
MslI CAYNNNNRTG 1 cut(s) 603
MspI CCGG 1 cut(s) 787
MspR9I CCNGG 1 cut(s) 788
Mva1269I GAATGC 2 cut(s) 170, 210
NciI CCSGG 1 cut(s) 788
NdeI CATATG 1 cut(s) 459
NdeII GATC 1 cut(s) 151
NlaIII CATG 3 cut(s) 30, 278, 332
NlaIV GGNNCC 2 cut(s) 465, 792
NspI RCATGY 1 cut(s) 30
PagI TCATGA 1 cut(s) 328
PceI AGGCCT 1 cut(s) 99
PctI GAATGC 2 cut(s) 170, 210
PfeI GAWTC 1 cut(s) 255
PleI GAGTC 1 cut(s) 368
PpsI GAGTC 1 cut(s) 368
Ppu21I YACGTR 1 cut(s) 320
PsiI TTATAA 1 cut(s) 363
PspN4I GGNNCC 2 cut(s) 465, 792
RsaI GTAC 3 cut(s) 318, 776, 785
RsaNI GTAC 3 cut(s) 317, 775, 784
RseI CAYNNNNRTG 1 cut(s) 603
SaqAI TTAA 3 cut(s) 93, 587, 674
Sau3AI GATC 1 cut(s) 151
SchI GAGTC 1 cut(s) 368
ScrFI CCNGG 1 cut(s) 788
SduI GDGCHC 1 cut(s) 424
SfaNI GCATC 2 cut(s) 97, 248
SmiMI CAYNNNNRTG 1 cut(s) 603
Sse9I AATT 5 cut(s) 123, 132, 264, 433, 671
SseBI AGGCCT 1 cut(s) 99
SspI AATATT 2 cut(s) 699, 732
SspMI CTAG 1 cut(s) 296
StuI AGGCCT 1 cut(s) 99
StyD4I CCNGG 1 cut(s) 786
TaaI ACNGT 1 cut(s) 357
TaiI ACGT 3 cut(s) 251, 322, 776
TaqI TCGA 3 cut(s) 130, 527, 766
TasI AATT 5 cut(s) 123, 132, 264, 433, 671
TfiI GAWTC 1 cut(s) 255
Tru1I TTAA 3 cut(s) 93, 587, 674
Tru9I TTAA 3 cut(s) 93, 587, 674
TscAI CASTG 2 cut(s) 154, 625
TspDTI ATGAA 4 cut(s) 317, 320, 554, 742
TspGWI ACGGA 1 cut(s) 24
TspRI CASTG 2 cut(s) 154, 625
VneI GTGCAC 1 cut(s) 420
XapI RAATTY 3 cut(s) 123, 132, 264
XceI RCATGY 1 cut(s) 30
XmiI GTMKAC 1 cut(s) 393
XspI CTAG 1 cut(s) 296
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.