FvH4_4g03323

Belongs to the iron ascorbate-dependent oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000054
Physical Location & Seq
Forward (+)
2973169 .. 2977369
4201 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g03323.t2

Sequence Viewer

Length: 1086 bp
ATGGCCACCGGGAAGTCAAGCGAGCCAGACAAAGACCGAATGCAGCAGCTGAAGGCCTTCGACGAAACCAAAGCTGGTGTCAAAGGGATAGTCGATGCTGGAATCACCAAACTCCCACCAATATTCGTGCGTCCAAAAAAGGATCCCTCCGTCGTCGGCGACAGTACGGTTTCAAATCATTTCAATATCCCAGAGGTGGATCTAGCTGAATATAATGGGAGGCGTGCTGAGGTGATTGACCAAGTCCGGAGGGCCGCAGAGAGCTATGGGTTCTTCCAGGTGGTAAACCATGAGATGCCCCAGAGAGTGATGGAGGAGATGATGGAGGCGGCGCGTGTATTTCACGAGCTGCCGAGGGAGGAGAAGGCGGAGTACTATAGTAGGGAGATGGCGACCAAGGTCAGATACTTCTCTGGCAGTACCATGTATCGCTGGATGTTTGTTGATTGGAAGGACAGTTTGCTGTGTGACATGAGCGACGAGCAGTTCGATCCTCAACAAATTCCTCTCGTTTGCAGAGAATTAACTATGGCGTACTCTAGGCACGTCCACAAGTTAGGGGTCATTTTGTTTGAATTTCTATCTGAAGCGCTTGGCCTCAAACCTGATCACCTTATAAACCTGGATATCGCAAAGGGGCTTACGATTTTGAGTCATTACTATCCATCATGCCCAGAGCCTGAACTAGCTTTTGGCACTGTCGAACACTCGGATCCTGATTTTATGACCATCCTACTTCAAGACCAAATTGGTGGACTTCAGGTTTTGTACCAGGACCAGTGGATTGATATTCCTCATGTAACTGGAGCTCTACTGGTGAATATCGGAGATTTCTTGCAGCTAATCTCAAACAATAAGTTCCTAAGCGTCAATCACAGAGTATTGACTAAAAAACAAGGTCCAAGAATTTCTGTGGCATGTTTTTTCAGACCTTCACTAGAGAATTGCTCGAGAGTATATGGGCCGATCAAAGAGTTGCTTTCAGAGGAAAAACCTCCAATTTATCAGGAAACAACAGTGAAAGATTATGTTATGTGCCACTACAAGAGATCCGGGCTAGAAGACTTGAAGCTGCATATGAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2OG-FeII_Oxy DIOX_N

Protein Analysis

362

Amino Acids

41.43

Weight (kDa)

5.78

Isoelectric Point (pI)

47.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 63 - 165 4.5e-19 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 216 - 281 5e-19 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000054)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03400 AT1G03400 AT1G03410 AT1G03410 AT1G04350 AT1G06620 AT1G06620 AT1G06640 AT1G06640 AT1G06640 AT1G06645 AT1G06650 AT1G06650 AT2G25450 AT2G30830 AT2G30840 AT2G30840 AT2G30840 AT3G61400 AT3G61400 AT5G43440 AT5G43440 AT5G43450 AT5G43450 AT5G59530 AT5G59540 AT5G59540
fragaria_vesca FvH4_2g03190 FvH4_2g03220 FvH4_3g07861 FvH4_3g31880 FvH4_3g31880 FvH4_3g31880 FvH4_4g03241 FvH4_4g03250 FvH4_4g03251 FvH4_4g03260 FvH4_4g03300 FvH4_4g03301 FvH4_4g03301 FvH4_4g03301 FvH4_4g03302 FvH4_4g03303 FvH4_4g03303 FvH4_4g03304 FvH4_4g03305 FvH4_4g03323 FvH4_4g03323 FvH4_5g19290 FvH4_5g19290 FvH4_5g19290 FvH4_5g19291 FvH4_5g19291 FvH4_5g19310 FvH4_5g19310 FvH4_5g19310 FvH4_5g19320 FvH4_5g19321 FvH4_5g19321 FvH4_5g19321 FvH4_7g31470
malus_domestica MD00G1220300.v1.1 MD02G1050800.v1.1 MD02G1053200.v1.1 MD02G1053300.v1.1 MD02G1054900.v1.1 MD03G1032300.v1.1 MD03G1245000.v1.1 MD03G1245300.v1.1 MD05G1014200.v1.1 MD13G1210900.v1.1 MD13G1211000.v1.1 MD13G1211100.v1.1 MD13G1211200.v1.1 MD13G1211800.v1.1 MD13G1211900.v1.1 MD13G1212000.v1.1 MD16G1214100.v1.1 MD16G1214300.v1.1 MD16G1214400.v1.1 MD16G1214600.v1.1 MD16G1215000.v1.1 MD16G1215200.v1.1 MD16G1215300.v1.1 MD16G1215500.v1.1 MD16G1271000.v1.1
prunus_persica Prupe.1G035500_v2.0.a1 Prupe.1G035700_v2.0.a1 Prupe.1G035800_v2.0.a1 Prupe.1G035900_v2.0.a1 Prupe.1G036000_v2.0.a1 Prupe.1G036100_v2.0.a1 Prupe.1G036200_v2.0.a1 Prupe.1G036400_v2.0.a1 Prupe.1G036500_v2.0.a1 Prupe.1G036600_v2.0.a1 Prupe.1G036700_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G191000_v2.0.a1 Prupe.1G191100_v2.0.a1
pyrus_communis pycom13g18340 pycom13g18350 pycom13g18380 pycom16g17990 pycom16g18010 pycom16g18020
rosa_chinensis RchiOBHm_Chr2g0124051 RchiOBHm_Chr4g0391811 RchiOBHm_Chr4g0391931 RchiOBHm_Chr4g0391961 RchiOBHm_Chr4g0391971 RchiOBHm_Chr4g0391981 RchiOBHm_Chr4g0391991 RchiOBHm_Chr4g0392031 RchiOBHm_Chr4g0392051 RchiOBHm_Chr4g0392061 RchiOBHm_Chr4g0392071 RchiOBHm_Chr4g0392081 RchiOBHm_Chr4g0392091 RchiOBHm_Chr4g0392111 RchiOBHm_Chr4g0392121 RchiOBHm_Chr4g0392131 RchiOBHm_Chr4g0392141 RchiOBHm_Chr4g0392151 RchiOBHm_Chr4g0392211 RchiOBHm_Chr4g0392251 RchiOBHm_Chr4g0392261 RchiOBHm_Chr4g0392301 RchiOBHm_Chr4g0392311 RchiOBHm_Chr4g0392341 RchiOBHm_Chr4g0409221 RchiOBHm_Chr4g0410991 RchiOBHm_Chr4g0429131 RchiOBHm_Chr4g0437051 RchiOBHm_Chr5g0038681 RchiOBHm_Chr5g0047071 RchiOBHm_Chr5g0058651 RchiOBHm_Chr6g0248121 RchiOBHm_Chr6g0248141 RchiOBHm_Chr6g0248291 RchiOBHm_Chr6g0248341 RchiOBHm_Chr6g0248351
rosa_laevigata RLG00000006473 RLG00000006475 RLG00000006667 RLG00000007095 RLG00000009819 RLG00000009820 RLG00000009821 RLG00000009822 RLG00000009825 RLG00000009826 RLG00000009830 RLG00000009831 RLG00000009832 RLG00000009833 RLG00000009834 RLG00000009835 RLG00000009837 RLG00000009838 RLG00000009839 RLG00000009841 RLG00000009842 RLG00000009844 RLG00000009845 RLG00000009846 RLG00000009847 RLG00000009848 RLG00000009849 RLG00000015160 RLG00000015161 RLG00000017791 RLG00000018779 RLG00000034461 RLG00000035237
rosa_multiflora Rmu_co8253791.1_g000001 Rmu_co8348827.1_g000001 Rmu_co8400489.1_g000001 Rmu_sc0000383.1_g000003 Rmu_sc0000383.1_g000005 Rmu_sc0000383.1_g000026 Rmu_sc0000846.1_g000012 Rmu_sc0001231.1_g000013 Rmu_sc0001231.1_g000026 Rmu_sc0001231.1_g000028 Rmu_sc0001800.1_g000027 Rmu_sc0003436.1_g000022 Rmu_sc0004104.1_g000004 Rmu_sc0004295.1_g000021 Rmu_sc0004295.1_g000031 Rmu_sc0004928.1_g000002 Rmu_sc0004928.1_g000008 Rmu_sc0004928.1_g000011 Rmu_sc0004928.1_g000027 Rmu_sc0004977.1_g000007 Rmu_sc0005018.1_g000002 Rmu_sc0005091.1_g000026 Rmu_sc0005091.1_g000032 Rmu_sc0005091.1_g000033 Rmu_sc0005817.1_g000003 Rmu_sc0005817.1_g000008 Rmu_sc0012482.1_g000002 Rmu_sc0014210.1_g000001 Rmu_sc0016150.1_g000001 Rmu_sc0029701.1_g000002 Rmu_sc0036585.1_g000001 Rmu_sc0037489.1_g000002
rosa_roxburghii Rroxscaffold_1G00021790 Rroxscaffold_1G00021800 Rroxscaffold_1G00034360 Rroxscaffold_2G00120130 Rroxscaffold_5G00337210 Rroxscaffold_5G00337220 Rroxscaffold_5G00337230 Rroxscaffold_5G00337250 Rroxscaffold_5G00337260 Rroxscaffold_5G00337270 Rroxscaffold_5G00337300 Rroxscaffold_5G00337310 Rroxscaffold_5G00337320 Rroxscaffold_5G00337330 Rroxscaffold_5G00337350 Rroxscaffold_5G00337370 Rroxscaffold_5G00337390 Rroxscaffold_5G00337400 Rroxscaffold_5G00337420 Rroxscaffold_5G00337430 Rroxscaffold_5G00337450 Rroxscaffold_5G00337470 Rroxscaffold_5G00337480 Rroxscaffold_5G00337520 Rroxscaffold_5G00378130 Rroxscaffold_6G00397800 Rroxscaffold_7G00213320 Rroxscaffold_7G00213390 Rroxscaffold_7G00213420 Rroxscaffold_7G00213470
rosa_rugosa Rorug02G0070100 Rorug02G0070100 Rorug02G0070100 Rorug02G0128600 Rorug02G0128700 Rorug02G0128800 Rorug02G0128900 Rorug02G0248400 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337100 Rorug03G0337200 Rorug03G0337300 Rorug03G0337600 Rorug03G0337700 Rorug03G0337800 Rorug03G0337900 Rorug03G0337900 Rorug03G0338000 Rorug03G0338100 Rorug03G0338200 Rorug04G0233200.1 Rorug04G0297900 Rorug05G0233700 Rorug05G0316700 Rorug05G0530800 Rorug05G0530900
rosa_samantha Rh2AG307400 Rh2BG316500 Rh2DG331200 Rh4AG039300 Rh4AG039400 Rh4AG039600 Rh4AG039700 Rh4AG039900 Rh4AG040000 Rh4AG040100 Rh4AG040300 Rh4AG040500 Rh4AG040700 Rh4AG041000 Rh4AG041100 Rh4AG041600 Rh4AG041800 Rh4AG041900 Rh4AG352400 Rh4BG033200 Rh4BG034100 Rh4BG034300 Rh4BG034700 Rh4BG034800 Rh4BG035200 Rh4BG035400 Rh4BG036000 Rh4BG036200 Rh4BG036300 Rh4BG036500 Rh4BG036800 Rh4BG361700 Rh4CG042000 Rh4CG042200 Rh4CG042300 Rh4CG042500 Rh4CG042600 Rh4CG042800 Rh4CG043200 Rh4CG043400 Rh4CG043500 Rh4CG043700 Rh4CG043800 Rh4CG044200 Rh4CG044500 Rh4CG044700 Rh4CG177000 Rh4CG310600 Rh4CG376000 Rh4DG036300 Rh4DG036900 Rh4DG037000 Rh4DG037100 Rh4DG037200 Rh4DG037300 Rh4DG037500 Rh4DG037700 Rh4DG037800 Rh4DG037900 Rh4DG038000 Rh4DG038200 Rh4DG038500 Rh4DG038700 Rh4DG038900 Rh4DG159600 Rh5CG347900 Rh5DG409900 Rh6AG045300 Rh6AG045800 Rh6AG046000 Rh6AG046100 Rh6BG040600 Rh6BG040700 Rh6BG042200 Rh6BG042700 Rh6BG042800 Rh6DG035900 Rh6DG036100 Rh6DG036200
rosa_wichuraiana Rw0G010420 Rw2G024780 Rw4G003020 Rw4G003070 Rw4G003080 Rw4G003090 Rw4G003100 Rw4G003130 Rw4G003140 Rw4G003150 Rw4G003180 Rw4G003190 Rw4G003200 Rw4G003210 Rw4G003220 Rw4G003240 Rw4G003270 Rw4G025050 Rw4G030850 Rw6G003930 Rw6G004000 Rw6G004030 Rw6G004040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 617
AccII CGCG 1 cut(s) 334
AccIII TCCGGA 1 cut(s) 246
AciI CCGC 3 cut(s) 255, 329, 368
AclWI GGATC 7 cut(s) 137, 150, 207, 485, 707, 720, 1044
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 3 cut(s) 501, 575, 906
AcuI CTGAAG 3 cut(s) 71, 606, 743
AfaI GTAC 5 cut(s) 166, 374, 421, 536, 770
AfeI AGCGCT 1 cut(s) 591
AfiI CCNNNNNNNGG 1 cut(s) 196
AgsI TTSAA 5 cut(s) 174, 184, 575, 740, 1069
AjiI CACGTC 1 cut(s) 547
AjnI CCWGG 3 cut(s) 276, 621, 771
AjuI GAANNNNNNNTTGG 2 cut(s) 675, 707
AluBI AGCT 9 cut(s) 49, 74, 206, 264, 349, 689, 809, 841, 1072
AluI AGCT 9 cut(s) 49, 74, 206, 264, 349, 689, 809, 841, 1072
Alw21I GWGCWC 1 cut(s) 811
AlwI GGATC 7 cut(s) 137, 150, 207, 485, 707, 720, 1044
AlwNI CAGNNNCTG 2 cut(s) 49, 680
Ama87I CYCGRG 1 cut(s) 949
Aor13HI TCCGGA 1 cut(s) 246
Aor51HI AGCGCT 1 cut(s) 591
AoxI GGCC 5 cut(s) 3, 54, 252, 595, 962
ApeKI GCWGC 5 cut(s) 43, 46, 349, 838, 1072
ApoI RAATTY 3 cut(s) 501, 575, 906
ArsI GACNNNNNNTTYG 6 cut(s) 63, 75, 95, 107, 470, 502
Asp700I GAANNNNTTC 1 cut(s) 56
AspLEI GCGC 2 cut(s) 334, 592
AspS9I GGNCC 4 cut(s) 252, 775, 899, 962
AsuC2I CCSGG 2 cut(s) 10, 1054
AsuHPI GGTGA 4 cut(s) 97, 244, 602, 829
AvaI CYCGRG 1 cut(s) 949
AvaII GGWCC 2 cut(s) 775, 899
BalI TGGCCA 1 cut(s) 5
BamHI GGATCC 2 cut(s) 142, 712
BanII GRGCYC 1 cut(s) 811
BarI GAAGNNNNNNTAC 2 cut(s) 356, 388
BauI CACGAG 1 cut(s) 344
BbsI GAAGAC 1 cut(s) 1068
Bbv12I GWGCWC 1 cut(s) 811
BbvCI CCTCAGC 1 cut(s) 228
BbvI GCAGC 5 cut(s) 55, 58, 336, 850, 1059
BccI CCATC 5 cut(s) 304, 316, 382, 673, 737
BciT130I CCWGG 3 cut(s) 278, 623, 773
BclI TGATCA 1 cut(s) 607
BcnI CCSGG 2 cut(s) 10, 1054
BfaI CTAG 5 cut(s) 203, 540, 686, 938, 1058
BfmI CTRYAG 1 cut(s) 376
BfoI RGCGCY 1 cut(s) 593
BisI GCNGC 7 cut(s) 44, 47, 255, 330, 350, 839, 1073
BlsI GCNGC 7 cut(s) 45, 48, 256, 331, 351, 840, 1074
BmcAI AGTACT 1 cut(s) 374
Bme1390I CCNGG 5 cut(s) 10, 278, 623, 773, 1054
Bme18I GGWCC 2 cut(s) 775, 899
BmeT110I CYCGRG 1 cut(s) 949
BmgBI CACGTC 1 cut(s) 547
BmgT120I GGNCC 4 cut(s) 252, 775, 899, 962
BmiI GGNNCC 2 cut(s) 144, 714
BmrFI CCNGG 5 cut(s) 10, 278, 623, 773, 1054
BmsI GCATC 2 cut(s) 85, 285
BoxI GACNNNNGTC 1 cut(s) 398
BpiI GAAGAC 1 cut(s) 1068
BplI GAGNNNNNCTC 2 cut(s) 932, 964
BpmI CTGGAG 1 cut(s) 825
Bpu10I CCTNAGC 2 cut(s) 228, 863
BpuMI CCSGG 2 cut(s) 10, 1054
BsaJI CCNNGG 2 cut(s) 353, 396
BsaWI WCCGGW 1 cut(s) 246
Bsc4I CCNNNNNNNGG 1 cut(s) 196
Bse1I ACTGG 3 cut(s) 778, 808, 819
BseAI TCCGGA 1 cut(s) 246
BseBI CCWGG 3 cut(s) 278, 623, 773
BseDI CCNNGG 2 cut(s) 353, 396
BseGI GGATG 2 cut(s) 441, 729
BseLI CCNNNNNNNGG 1 cut(s) 196
BseMII CTCAG 1 cut(s) 219
BseNI ACTGG 3 cut(s) 778, 808, 819
BseRI GAGGAG 2 cut(s) 329, 374
BseXI GCAGC 5 cut(s) 55, 58, 336, 850, 1059
Bsh1236I CGCG 1 cut(s) 334
BshFI GGCC 5 cut(s) 5, 56, 254, 597, 964
BsiHKAI GWGCWC 1 cut(s) 811
BsiHKCI CYCGRG 1 cut(s) 949
BsiSI CCGG 3 cut(s) 9, 247, 1053
BslI CCNNNNNNNGG 1 cut(s) 196
BsmI GAATGC 1 cut(s) 45
BsnI GGCC 5 cut(s) 5, 56, 254, 597, 964
BsoBI CYCGRG 1 cut(s) 949
Bsp1286I GDGCHC 1 cut(s) 811
Bsp13I TCCGGA 1 cut(s) 246
Bsp143I GATC 7 cut(s) 142, 199, 490, 607, 712, 966, 1049
BspACI CCGC 3 cut(s) 255, 329, 368
BspANI GGCC 5 cut(s) 5, 56, 254, 597, 964
BspCNI CTCAG 1 cut(s) 220
BspEI TCCGGA 1 cut(s) 246
BspFNI CGCG 1 cut(s) 334
BspLI GGNNCC 2 cut(s) 144, 714
BspPI GGATC 7 cut(s) 137, 150, 207, 485, 707, 720, 1044
BsrI ACTGG 3 cut(s) 778, 808, 819
BssECI CCNNGG 2 cut(s) 353, 396
BssMI GATC 7 cut(s) 142, 199, 490, 607, 712, 966, 1049
BssSI CACGAG 1 cut(s) 344
BssT1I CCWWGG 1 cut(s) 396
Bst2BI CACGAG 1 cut(s) 344
Bst2UI CCWGG 3 cut(s) 278, 623, 773
Bst4CI ACNGT 5 cut(s) 164, 169, 458, 700, 1018
BstC8I GCNNGC 2 cut(s) 23, 225
BstDEI CTNAG 2 cut(s) 228, 863
BstF5I GGATG 2 cut(s) 441, 729
BstFNI CGCG 1 cut(s) 334
BstH2I RGCGCY 1 cut(s) 593
BstHHI GCGC 2 cut(s) 334, 592
BstKTI GATC 7 cut(s) 145, 202, 493, 610, 715, 969, 1052
BstMBI GATC 7 cut(s) 142, 199, 490, 607, 712, 966, 1049
BstNI CCWGG 3 cut(s) 278, 623, 773
BstNSI RCATGY 1 cut(s) 921
BstPAI GACNNNNGTC 1 cut(s) 398
BstSCI CCNGG 5 cut(s) 8, 276, 621, 771, 1052
BstSFI CTRYAG 1 cut(s) 376
BstUI CGCG 1 cut(s) 334
BstV1I GCAGC 5 cut(s) 55, 58, 336, 850, 1059
BstV2I GAAGAC 1 cut(s) 1068
BstX2I RGATCY 4 cut(s) 142, 199, 712, 1049
BstXI CCANNNNNNTGG 1 cut(s) 752
BstYI RGATCY 4 cut(s) 142, 199, 712, 1049
BsuRI GGCC 5 cut(s) 5, 56, 254, 597, 964
BtrI CACGTC 1 cut(s) 547
BtsCI GGATG 2 cut(s) 441, 729
BtsIMutI CAGTG 3 cut(s) 696, 785, 1023
Cac8I GCNNGC 2 cut(s) 23, 225
CaiI CAGNNNCTG 2 cut(s) 49, 680
CfoI GCGC 2 cut(s) 334, 592
Cfr13I GGNCC 4 cut(s) 252, 775, 899, 962
CseI GACGC 2 cut(s) 119, 856
Csp6I GTAC 5 cut(s) 165, 373, 420, 535, 769
CviAII CATG 6 cut(s) 290, 424, 472, 669, 797, 918
CviQI GTAC 5 cut(s) 165, 373, 420, 535, 769
DdeI CTNAG 2 cut(s) 228, 863
DpnI GATC 7 cut(s) 144, 201, 492, 609, 714, 968, 1051
DpnII GATC 7 cut(s) 142, 199, 490, 607, 712, 966, 1049
EaeI YGGCCR 1 cut(s) 3
EciI GGCGGA 1 cut(s) 383
Ecl136II GAGCTC 1 cut(s) 809
Eco130I CCWWGG 1 cut(s) 396
Eco147I AGGCCT 1 cut(s) 56
Eco24I GRGCYC 1 cut(s) 811
Eco32I GATATC 1 cut(s) 628
Eco47I GGWCC 2 cut(s) 775, 899
Eco47III AGCGCT 1 cut(s) 591
Eco53kI GAGCTC 1 cut(s) 809
Eco57I CTGAAG 3 cut(s) 71, 606, 743
Eco88I CYCGRG 1 cut(s) 949
EcoICRI GAGCTC 1 cut(s) 809
EcoRII CCWGG 3 cut(s) 276, 621, 771
EcoRV GATATC 1 cut(s) 628
EcoT14I CCWWGG 1 cut(s) 396
EcoT38I GRGCYC 1 cut(s) 811
ErhI CCWWGG 1 cut(s) 396
FaeI CATG 6 cut(s) 293, 427, 475, 672, 800, 921
FalI AAGNNNNNCTT 2 cut(s) 963, 995
FatI CATG 6 cut(s) 289, 423, 471, 668, 796, 917
FauNDI CATATG 1 cut(s) 1077
FbaI TGATCA 1 cut(s) 607
Fnu4HI GCNGC 7 cut(s) 44, 47, 255, 330, 350, 839, 1073
FokI GGATG 2 cut(s) 448, 716
FriOI GRGCYC 1 cut(s) 811
Fsp4HI GCNGC 7 cut(s) 44, 47, 255, 330, 350, 839, 1073
FspBI CTAG 5 cut(s) 203, 540, 686, 938, 1058
GlaI GCGC 2 cut(s) 333, 591
GluI GCNGC 7 cut(s) 44, 47, 255, 330, 350, 839, 1073
GsuI CTGGAG 1 cut(s) 825
HaeII RGCGCY 1 cut(s) 593
HaeIII GGCC 5 cut(s) 5, 56, 254, 597, 964
HapII CCGG 3 cut(s) 9, 247, 1053
HgaI GACGC 2 cut(s) 119, 856
HhaI GCGC 2 cut(s) 334, 592
Hin1II CATG 6 cut(s) 293, 427, 475, 672, 800, 921
Hin6I GCGC 2 cut(s) 332, 590
HinP1I GCGC 2 cut(s) 332, 590
HinfI GANTC 2 cut(s) 102, 652
HpaII CCGG 3 cut(s) 9, 247, 1053
HphI GGTGA 4 cut(s) 97, 244, 602, 829
Hpy166II GTNNAC 3 cut(s) 286, 550, 755
Hpy188I TCNGA 6 cut(s) 404, 586, 712, 827, 929, 985
Hpy188III TCNNGA 6 cut(s) 247, 344, 716, 740, 951, 1007
Hpy8I GTNNAC 3 cut(s) 286, 550, 755
Hpy99I CGWCG 4 cut(s) 65, 155, 158, 482
HpyAV CCTTC 5 cut(s) 46, 67, 358, 445, 942
HpyCH4III ACNGT 5 cut(s) 164, 169, 458, 700, 1018
HpyCH4IV ACGT 1 cut(s) 546
HpyCH4V TGCA 4 cut(s) 43, 516, 838, 1075
HpyF3I CTNAG 2 cut(s) 228, 863
HpySE526I ACGT 1 cut(s) 546
Hsp92II CATG 6 cut(s) 293, 427, 475, 672, 800, 921
HspAI GCGC 2 cut(s) 332, 590
Kpn2I TCCGGA 1 cut(s) 246
Ksp22I TGATCA 1 cut(s) 607
Kzo9I GATC 7 cut(s) 142, 199, 490, 607, 712, 966, 1049
LmnI GCTCC 1 cut(s) 806
Lsp1109I GCAGC 5 cut(s) 55, 58, 336, 850, 1059
LweI GCATC 2 cut(s) 85, 285
MaeI CTAG 5 cut(s) 203, 540, 686, 938, 1058
MaeII ACGT 1 cut(s) 546
MaeIII GTNAC 2 cut(s) 467, 799
MalI GATC 7 cut(s) 144, 201, 492, 609, 714, 968, 1051
MboI GATC 7 cut(s) 142, 199, 490, 607, 712, 966, 1049
MboII GAAGA 2 cut(s) 265, 1073
MflI RGATCY 4 cut(s) 142, 199, 712, 1049
MhlI GDGCHC 1 cut(s) 811
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 7 cut(s) 501, 521, 575, 747, 906, 943, 999
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 1 cut(s) 661
Mox20I TGGCCA 1 cut(s) 5
MroI TCCGGA 1 cut(s) 246
MroXI GAANNNNTTC 1 cut(s) 56
MscI TGGCCA 1 cut(s) 5
MseI TTAA 1 cut(s) 524
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 1 cut(s) 49
MspI CCGG 3 cut(s) 9, 247, 1053
MspR9I CCNGG 5 cut(s) 10, 278, 623, 773, 1054
Mva1269I GAATGC 1 cut(s) 45
MvaI CCWGG 3 cut(s) 278, 623, 773
MvnI CGCG 1 cut(s) 334
NciI CCSGG 2 cut(s) 10, 1054
NdeI CATATG 1 cut(s) 1077
NdeII GATC 7 cut(s) 142, 199, 490, 607, 712, 966, 1049
NlaIII CATG 6 cut(s) 293, 427, 475, 672, 800, 921
NlaIV GGNNCC 2 cut(s) 144, 714
NmeAIII GCCGAG 1 cut(s) 378
NmuCI GTSAC 1 cut(s) 467
NspI RCATGY 1 cut(s) 921
PaeR7I CTCGAG 1 cut(s) 949
PceI AGGCCT 1 cut(s) 56
PcsI WCGNNNNNNNCGW 1 cut(s) 486
PctI GAATGC 1 cut(s) 45
PdmI GAANNNNTTC 1 cut(s) 56
PfeI GAWTC 1 cut(s) 102
PflFI GACNNNGTC 1 cut(s) 242
PkrI GCNGC 7 cut(s) 45, 48, 256, 331, 351, 840, 1074
PleI GAGTC 1 cut(s) 660
PpsI GAGTC 1 cut(s) 660
PshAI GACNNNNGTC 1 cut(s) 398
PsiI TTATAA 1 cut(s) 617
Psp124BI GAGCTC 1 cut(s) 811
Psp6I CCWGG 3 cut(s) 276, 621, 771
PspGI CCWGG 3 cut(s) 276, 621, 771
PspN4I GGNNCC 2 cut(s) 144, 714
PspPI GGNCC 4 cut(s) 252, 775, 899, 962
PstNI CAGNNNCTG 2 cut(s) 49, 680
PsuI RGATCY 4 cut(s) 142, 199, 712, 1049
PsyI GACNNNGTC 1 cut(s) 242
PvuII CAGCTG 1 cut(s) 49
RsaI GTAC 5 cut(s) 166, 374, 421, 536, 770
RsaNI GTAC 5 cut(s) 165, 373, 420, 535, 769
SacI GAGCTC 1 cut(s) 811
SaqAI TTAA 1 cut(s) 524
SatI GCNGC 7 cut(s) 44, 47, 255, 330, 350, 839, 1073
Sau3AI GATC 7 cut(s) 142, 199, 490, 607, 712, 966, 1049
Sau96I GGNCC 4 cut(s) 252, 775, 899, 962
ScaI AGTACT 1 cut(s) 374
SchI GAGTC 1 cut(s) 661
ScrFI CCNGG 5 cut(s) 10, 278, 623, 773, 1054
SduI GDGCHC 1 cut(s) 811
SfaNI GCATC 2 cut(s) 85, 285
SfcI CTRYAG 1 cut(s) 376
Sfr274I CTCGAG 1 cut(s) 949
SinI GGWCC 2 cut(s) 775, 899
SlaI CTCGAG 1 cut(s) 949
SmlI CTYRAG 1 cut(s) 949
SmoI CTYRAG 1 cut(s) 949
Sse9I AATT 7 cut(s) 501, 521, 575, 747, 906, 943, 999
SseBI AGGCCT 1 cut(s) 56
SsiI CCGC 3 cut(s) 255, 329, 368
SspI AATATT 1 cut(s) 123
SspMI CTAG 5 cut(s) 203, 540, 686, 938, 1058
SstI GAGCTC 1 cut(s) 811
StuI AGGCCT 1 cut(s) 56
StyD4I CCNGG 5 cut(s) 8, 276, 621, 771, 1052
StyI CCWWGG 1 cut(s) 396
TaaI ACNGT 5 cut(s) 164, 169, 458, 700, 1018
TaiI ACGT 1 cut(s) 549
TaqI TCGA 5 cut(s) 60, 93, 489, 702, 950
TaqII GACCGA 1 cut(s) 51
TasI AATT 7 cut(s) 501, 521, 575, 747, 906, 943, 999
TatI WGTACW 1 cut(s) 372
TauI GCSGC 2 cut(s) 257, 332
TfiI GAWTC 1 cut(s) 102
Tru1I TTAA 1 cut(s) 524
Tru9I TTAA 1 cut(s) 524
TscAI CASTG 3 cut(s) 703, 785, 1023
TseFI GTSAC 1 cut(s) 467
TseI GCWGC 5 cut(s) 43, 46, 349, 838, 1072
Tsp45I GTSAC 1 cut(s) 467
TspGWI ACGGA 1 cut(s) 139
TspRI CASTG 3 cut(s) 703, 785, 1023
Tth111I GACNNNGTC 1 cut(s) 242
VpaK11BI GGWCC 2 cut(s) 775, 899
XapI RAATTY 3 cut(s) 501, 575, 906
XceI RCATGY 1 cut(s) 921
XhoI CTCGAG 1 cut(s) 949
XmnI GAANNNNTTC 1 cut(s) 56
XspI CTAG 5 cut(s) 203, 540, 686, 938, 1058
ZrmI AGTACT 1 cut(s) 374
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.