MD03G1245300.v1.1

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
Physical Location & Seq
Reverse (-)
33216832 .. 33218238
1407 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1245300.v1.1.491

Sequence Viewer

Length: 462 bp
ATGGTAGCTATCAACACAAATTACGACCGGAAAAGTGAGGTAAAGGCTTTTGATGACACCAAAGGAGTTAAAGGCCTCGTTGATGCGGGCATAACTGAGGTTCATAGAATTTTTCATCATCCACCAGAGTCGGATGTTCACTACCCCATCAACAACTCCGGCTCTGATTCAGAAGCCACCCAGTTTAGCATCTCAGTCATAGACCTTCAAGGCCTTGATCGACTTGATTGTCCAACCAAACGAAAGGAGATTGTTGCGAAAGTCGGAGAGGCGTCAGAGACTTGGGGCTTTTTTCAAATTGTCAACCATGGAATACCTGTTGATGTTCTGGAGGAGATAAAGGATGGGGTACGTGGAGACGTACTAGTTGAATATTCGACGCAAGTAATGAAGTTGGGGAAGTTATTATTCGAGTTGTTGTCGGAGGCTCTTGTCCCAAGTCACTTAAAAGACAGATTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

154

Amino Acids

17.02

Weight (kDa)

5.18

Isoelectric Point (pI)

21.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 64 - 117 4.4e-12 non-haem dioxygenase in morphine synthesis N-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000054)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03400 AT1G03400 AT1G03410 AT1G03410 AT1G04350 AT1G06620 AT1G06620 AT1G06640 AT1G06640 AT1G06640 AT1G06645 AT1G06650 AT1G06650 AT2G25450 AT2G30830 AT2G30840 AT2G30840 AT2G30840 AT3G61400 AT3G61400 AT5G43440 AT5G43440 AT5G43450 AT5G43450 AT5G59530 AT5G59540 AT5G59540
fragaria_vesca FvH4_2g03190 FvH4_2g03220 FvH4_3g07861 FvH4_3g31880 FvH4_3g31880 FvH4_3g31880 FvH4_4g03241 FvH4_4g03250 FvH4_4g03251 FvH4_4g03260 FvH4_4g03300 FvH4_4g03301 FvH4_4g03301 FvH4_4g03301 FvH4_4g03302 FvH4_4g03303 FvH4_4g03303 FvH4_4g03304 FvH4_4g03305 FvH4_4g03323 FvH4_4g03323 FvH4_5g19290 FvH4_5g19290 FvH4_5g19290 FvH4_5g19291 FvH4_5g19291 FvH4_5g19310 FvH4_5g19310 FvH4_5g19310 FvH4_5g19320 FvH4_5g19321 FvH4_5g19321 FvH4_5g19321 FvH4_7g31470
malus_domestica MD00G1220300.v1.1 MD02G1050800.v1.1 MD02G1053200.v1.1 MD02G1053300.v1.1 MD02G1054900.v1.1 MD03G1032300.v1.1 MD03G1245000.v1.1 MD03G1245300.v1.1 MD05G1014200.v1.1 MD13G1210900.v1.1 MD13G1211000.v1.1 MD13G1211100.v1.1 MD13G1211200.v1.1 MD13G1211800.v1.1 MD13G1211900.v1.1 MD13G1212000.v1.1 MD16G1214100.v1.1 MD16G1214300.v1.1 MD16G1214400.v1.1 MD16G1214600.v1.1 MD16G1215000.v1.1 MD16G1215200.v1.1 MD16G1215300.v1.1 MD16G1215500.v1.1 MD16G1271000.v1.1
prunus_persica Prupe.1G035500_v2.0.a1 Prupe.1G035700_v2.0.a1 Prupe.1G035800_v2.0.a1 Prupe.1G035900_v2.0.a1 Prupe.1G036000_v2.0.a1 Prupe.1G036100_v2.0.a1 Prupe.1G036200_v2.0.a1 Prupe.1G036400_v2.0.a1 Prupe.1G036500_v2.0.a1 Prupe.1G036600_v2.0.a1 Prupe.1G036700_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G191000_v2.0.a1 Prupe.1G191100_v2.0.a1
pyrus_communis pycom13g18340 pycom13g18350 pycom13g18380 pycom16g17990 pycom16g18010 pycom16g18020
rosa_chinensis RchiOBHm_Chr2g0124051 RchiOBHm_Chr4g0391811 RchiOBHm_Chr4g0391931 RchiOBHm_Chr4g0391961 RchiOBHm_Chr4g0391971 RchiOBHm_Chr4g0391981 RchiOBHm_Chr4g0391991 RchiOBHm_Chr4g0392031 RchiOBHm_Chr4g0392051 RchiOBHm_Chr4g0392061 RchiOBHm_Chr4g0392071 RchiOBHm_Chr4g0392081 RchiOBHm_Chr4g0392091 RchiOBHm_Chr4g0392111 RchiOBHm_Chr4g0392121 RchiOBHm_Chr4g0392131 RchiOBHm_Chr4g0392141 RchiOBHm_Chr4g0392151 RchiOBHm_Chr4g0392211 RchiOBHm_Chr4g0392251 RchiOBHm_Chr4g0392261 RchiOBHm_Chr4g0392301 RchiOBHm_Chr4g0392311 RchiOBHm_Chr4g0392341 RchiOBHm_Chr4g0409221 RchiOBHm_Chr4g0410991 RchiOBHm_Chr4g0429131 RchiOBHm_Chr4g0437051 RchiOBHm_Chr5g0038681 RchiOBHm_Chr5g0047071 RchiOBHm_Chr5g0058651 RchiOBHm_Chr6g0248121 RchiOBHm_Chr6g0248141 RchiOBHm_Chr6g0248291 RchiOBHm_Chr6g0248341 RchiOBHm_Chr6g0248351
rosa_laevigata RLG00000006473 RLG00000006475 RLG00000006667 RLG00000007095 RLG00000009819 RLG00000009820 RLG00000009821 RLG00000009822 RLG00000009825 RLG00000009826 RLG00000009830 RLG00000009831 RLG00000009832 RLG00000009833 RLG00000009834 RLG00000009835 RLG00000009837 RLG00000009838 RLG00000009839 RLG00000009841 RLG00000009842 RLG00000009844 RLG00000009845 RLG00000009846 RLG00000009847 RLG00000009848 RLG00000009849 RLG00000015160 RLG00000015161 RLG00000017791 RLG00000018779 RLG00000034461 RLG00000035237
rosa_multiflora Rmu_co8253791.1_g000001 Rmu_co8348827.1_g000001 Rmu_co8400489.1_g000001 Rmu_sc0000383.1_g000003 Rmu_sc0000383.1_g000005 Rmu_sc0000383.1_g000026 Rmu_sc0000846.1_g000012 Rmu_sc0001231.1_g000013 Rmu_sc0001231.1_g000026 Rmu_sc0001231.1_g000028 Rmu_sc0001800.1_g000027 Rmu_sc0003436.1_g000022 Rmu_sc0004104.1_g000004 Rmu_sc0004295.1_g000021 Rmu_sc0004295.1_g000031 Rmu_sc0004928.1_g000002 Rmu_sc0004928.1_g000008 Rmu_sc0004928.1_g000011 Rmu_sc0004928.1_g000027 Rmu_sc0004977.1_g000007 Rmu_sc0005018.1_g000002 Rmu_sc0005091.1_g000026 Rmu_sc0005091.1_g000032 Rmu_sc0005091.1_g000033 Rmu_sc0005817.1_g000003 Rmu_sc0005817.1_g000008 Rmu_sc0012482.1_g000002 Rmu_sc0014210.1_g000001 Rmu_sc0016150.1_g000001 Rmu_sc0029701.1_g000002 Rmu_sc0036585.1_g000001 Rmu_sc0037489.1_g000002
rosa_roxburghii Rroxscaffold_1G00021790 Rroxscaffold_1G00021800 Rroxscaffold_1G00034360 Rroxscaffold_2G00120130 Rroxscaffold_5G00337210 Rroxscaffold_5G00337220 Rroxscaffold_5G00337230 Rroxscaffold_5G00337250 Rroxscaffold_5G00337260 Rroxscaffold_5G00337270 Rroxscaffold_5G00337300 Rroxscaffold_5G00337310 Rroxscaffold_5G00337320 Rroxscaffold_5G00337330 Rroxscaffold_5G00337350 Rroxscaffold_5G00337370 Rroxscaffold_5G00337390 Rroxscaffold_5G00337400 Rroxscaffold_5G00337420 Rroxscaffold_5G00337430 Rroxscaffold_5G00337450 Rroxscaffold_5G00337470 Rroxscaffold_5G00337480 Rroxscaffold_5G00337520 Rroxscaffold_5G00378130 Rroxscaffold_6G00397800 Rroxscaffold_7G00213320 Rroxscaffold_7G00213390 Rroxscaffold_7G00213420 Rroxscaffold_7G00213470
rosa_rugosa Rorug02G0070100 Rorug02G0070100 Rorug02G0070100 Rorug02G0128600 Rorug02G0128700 Rorug02G0128800 Rorug02G0128900 Rorug02G0248400 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337100 Rorug03G0337200 Rorug03G0337300 Rorug03G0337600 Rorug03G0337700 Rorug03G0337800 Rorug03G0337900 Rorug03G0337900 Rorug03G0338000 Rorug03G0338100 Rorug03G0338200 Rorug04G0233200.1 Rorug04G0297900 Rorug05G0233700 Rorug05G0316700 Rorug05G0530800 Rorug05G0530900
rosa_samantha Rh2AG307400 Rh2BG316500 Rh2DG331200 Rh4AG039300 Rh4AG039400 Rh4AG039600 Rh4AG039700 Rh4AG039900 Rh4AG040000 Rh4AG040100 Rh4AG040300 Rh4AG040500 Rh4AG040700 Rh4AG041000 Rh4AG041100 Rh4AG041600 Rh4AG041800 Rh4AG041900 Rh4AG352400 Rh4BG033200 Rh4BG034100 Rh4BG034300 Rh4BG034700 Rh4BG034800 Rh4BG035200 Rh4BG035400 Rh4BG036000 Rh4BG036200 Rh4BG036300 Rh4BG036500 Rh4BG036800 Rh4BG361700 Rh4CG042000 Rh4CG042200 Rh4CG042300 Rh4CG042500 Rh4CG042600 Rh4CG042800 Rh4CG043200 Rh4CG043400 Rh4CG043500 Rh4CG043700 Rh4CG043800 Rh4CG044200 Rh4CG044500 Rh4CG044700 Rh4CG177000 Rh4CG310600 Rh4CG376000 Rh4DG036300 Rh4DG036900 Rh4DG037000 Rh4DG037100 Rh4DG037200 Rh4DG037300 Rh4DG037500 Rh4DG037700 Rh4DG037800 Rh4DG037900 Rh4DG038000 Rh4DG038200 Rh4DG038500 Rh4DG038700 Rh4DG038900 Rh4DG159600 Rh5CG347900 Rh5DG409900 Rh6AG045300 Rh6AG045800 Rh6AG046000 Rh6AG046100 Rh6BG040600 Rh6BG040700 Rh6BG042200 Rh6BG042700 Rh6BG042800 Rh6DG035900 Rh6DG036100 Rh6DG036200
rosa_wichuraiana Rw0G010420 Rw2G024780 Rw4G003020 Rw4G003070 Rw4G003080 Rw4G003090 Rw4G003100 Rw4G003130 Rw4G003140 Rw4G003150 Rw4G003180 Rw4G003190 Rw4G003200 Rw4G003210 Rw4G003220 Rw4G003240 Rw4G003270 Rw4G025050 Rw4G030850 Rw6G003930 Rw6G004000 Rw6G004030 Rw6G004040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 228
AciI CCGC 1 cut(s) 86
AcsI RAATTY 1 cut(s) 108
AcyI GRCGYC 1 cut(s) 272
AfaI GTAC 2 cut(s) 351, 363
AgsI TTSAA 3 cut(s) 209, 296, 371
AhlI ACTAGT 1 cut(s) 364
AluBI AGCT 1 cut(s) 8
AluI AGCT 1 cut(s) 8
Alw26I GTCTC 2 cut(s) 272, 351
AoxI GGCC 2 cut(s) 73, 211
ApoI RAATTY 1 cut(s) 108
BccI CCATC 2 cut(s) 155, 338
BcoDI GTCTC 2 cut(s) 272, 351
BcuI ACTAGT 1 cut(s) 364
BfaI CTAG 1 cut(s) 365
BmrI ACTGGG 1 cut(s) 175
BmsI GCATC 2 cut(s) 73, 198
BmuI ACTGGG 1 cut(s) 175
BpmI CTGGAG 1 cut(s) 350
BsaAI YACGTR 1 cut(s) 353
BsaHI GRCGYC 1 cut(s) 272
BsaJI CCNNGG 1 cut(s) 307
BsaWI WCCGGW 1 cut(s) 27
Bse1I ACTGG 1 cut(s) 181
BseDI CCNNGG 1 cut(s) 307
BseGI GGATG 3 cut(s) 118, 139, 349
BseMII CTCAG 2 cut(s) 87, 207
BseNI ACTGG 1 cut(s) 181
BseRI GAGGAG 1 cut(s) 347
Bsh1285I CGRYCG 1 cut(s) 28
BshFI GGCC 2 cut(s) 75, 213
BsiEI CGRYCG 1 cut(s) 28
BsiSI CCGG 2 cut(s) 28, 159
BslFI GGGAC 1 cut(s) 419
BsmAI GTCTC 2 cut(s) 272, 351
BsmBI CGTCTC 1 cut(s) 351
BsmFI GGGAC 1 cut(s) 419
BsnI GGCC 2 cut(s) 75, 213
Bsp143I GATC 1 cut(s) 217
Bsp19I CCATGG 1 cut(s) 307
BspACI CCGC 1 cut(s) 86
BspANI GGCC 2 cut(s) 75, 213
BspCNI CTCAG 2 cut(s) 88, 206
BsrI ACTGG 1 cut(s) 181
BssECI CCNNGG 1 cut(s) 307
BssMI GATC 1 cut(s) 217
BssNI GRCGYC 1 cut(s) 272
BssT1I CCWWGG 1 cut(s) 307
BstACI GRCGYC 1 cut(s) 272
BstBAI YACGTR 1 cut(s) 353
BstC8I GCNNGC 1 cut(s) 88
BstDEI CTNAG 2 cut(s) 96, 193
BstDSI CCRYGG 1 cut(s) 307
BstF5I GGATG 3 cut(s) 118, 139, 349
BstKTI GATC 1 cut(s) 220
BstMAI GTCTC 2 cut(s) 272, 351
BstMBI GATC 1 cut(s) 217
BstMCI CGRYCG 1 cut(s) 28
BsuRI GGCC 2 cut(s) 75, 213
BtgI CCRYGG 1 cut(s) 307
BtsCI GGATG 3 cut(s) 118, 139, 349
Cac8I GCNNGC 1 cut(s) 88
CseI GACGC 2 cut(s) 261, 388
Csp6I GTAC 2 cut(s) 350, 362
CviAII CATG 1 cut(s) 308
CviJI RGCY 8 cut(s) 8, 47, 75, 162, 176, 213, 288, 428
CviKI_1 RGCY 8 cut(s) 8, 47, 75, 162, 176, 213, 288, 428
CviQI GTAC 2 cut(s) 350, 362
DdeI CTNAG 2 cut(s) 96, 193
DpnI GATC 1 cut(s) 219
DpnII GATC 1 cut(s) 217
DrdI GACNNNNNNGTC 1 cut(s) 228
DseDI GACNNNNNNGTC 1 cut(s) 228
Eco130I CCWWGG 1 cut(s) 307
Eco147I AGGCCT 2 cut(s) 75, 213
EcoT14I CCWWGG 1 cut(s) 307
ErhI CCWWGG 1 cut(s) 307
Esp3I CGTCTC 1 cut(s) 351
FaeI CATG 1 cut(s) 311
FaiI YATR 4 cut(s) 92, 105, 200, 309
FaqI GGGAC 1 cut(s) 419
FatI CATG 1 cut(s) 307
FauI CCCGC 1 cut(s) 79
FokI GGATG 3 cut(s) 105, 146, 356
FspBI CTAG 1 cut(s) 365
GsuI CTGGAG 1 cut(s) 350
HaeIII GGCC 2 cut(s) 75, 213
HapII CCGG 2 cut(s) 28, 159
HgaI GACGC 2 cut(s) 261, 388
Hin1I GRCGYC 1 cut(s) 272
Hin1II CATG 1 cut(s) 311
HincII GTYRAC 1 cut(s) 304
HindII GTYRAC 1 cut(s) 304
HinfI GANTC 2 cut(s) 128, 167
HpaII CCGG 2 cut(s) 28, 159
Hpy166II GTNNAC 2 cut(s) 139, 304
Hpy188I TCNGA 6 cut(s) 133, 166, 172, 266, 277, 424
Hpy188III TCNNGA 1 cut(s) 329
Hpy8I GTNNAC 2 cut(s) 139, 304
Hpy99I CGWCG 1 cut(s) 382
HpyAV CCTTC 1 cut(s) 215
HpyCH4IV ACGT 2 cut(s) 352, 360
HpyF3I CTNAG 2 cut(s) 96, 193
HpySE526I ACGT 2 cut(s) 352, 360
Hsp92I GRCGYC 1 cut(s) 272
Hsp92II CATG 1 cut(s) 311
Kzo9I GATC 1 cut(s) 217
LpnPI CCDG 6 cut(s) 41, 138, 172, 194, 314, 330
LweI GCATC 2 cut(s) 73, 198
MaeI CTAG 1 cut(s) 365
MaeII ACGT 2 cut(s) 352, 360
MaeIII GTNAC 1 cut(s) 440
MalI GATC 1 cut(s) 219
MboI GATC 1 cut(s) 217
MluCI AATT 3 cut(s) 19, 108, 297
MlyI GAGTC 1 cut(s) 137
MmeI TCCRAC 4 cut(s) 111, 244, 257, 402
MnlI CCTC 6 cut(s) 31, 86, 91, 262, 325, 418
MseI TTAA 2 cut(s) 69, 446
MspI CCGG 2 cut(s) 28, 159
NcoI CCATGG 1 cut(s) 307
NdeII GATC 1 cut(s) 217
NlaIII CATG 1 cut(s) 311
NmuCI GTSAC 1 cut(s) 440
PceI AGGCCT 2 cut(s) 75, 213
PfeI GAWTC 1 cut(s) 167
PleI GAGTC 1 cut(s) 136
PpsI GAGTC 1 cut(s) 136
Ppu21I YACGTR 1 cut(s) 353
RsaI GTAC 2 cut(s) 351, 363
RsaNI GTAC 2 cut(s) 350, 362
SaqAI TTAA 2 cut(s) 69, 446
Sau3AI GATC 1 cut(s) 217
SchI GAGTC 1 cut(s) 137
SetI ASST 7 cut(s) 10, 42, 102, 207, 319, 355, 363
SfaNI GCATC 2 cut(s) 73, 198
SpeI ACTAGT 1 cut(s) 364
Sse9I AATT 3 cut(s) 19, 108, 297
SseBI AGGCCT 2 cut(s) 75, 213
SsiI CCGC 1 cut(s) 86
SspI AATATT 1 cut(s) 374
SspMI CTAG 1 cut(s) 365
StuI AGGCCT 2 cut(s) 75, 213
StyI CCWWGG 1 cut(s) 307
TaiI ACGT 2 cut(s) 355, 363
TaqI TCGA 3 cut(s) 220, 377, 411
TasI AATT 3 cut(s) 19, 108, 297
TfiI GAWTC 1 cut(s) 167
Tru1I TTAA 2 cut(s) 69, 446
Tru9I TTAA 2 cut(s) 69, 446
TseFI GTSAC 1 cut(s) 440
Tsp45I GTSAC 1 cut(s) 440
TspDTI ATGAA 3 cut(s) 92, 104, 404
XapI RAATTY 1 cut(s) 108
XspI CTAG 1 cut(s) 365
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.