RchiOBHm_Chr4g0392111

Belongs to the iron ascorbate-dependent oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0000054
Physical Location & Seq
Forward (+)
7524927 .. 7526288
1362 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ36489

Sequence Viewer

Length: 1086 bp
ATGCTAACCAACACAAATGAGGTTGCAGCAACCAATTATGACAGGAAAAGTGAACTAAAAGCTTTTGATGACACAAAAAATGGTGTCAAAGGCCTTGTTGATGCTGGCATAACCGAGATTCCTCGAATTTTTCATCATCCACCAGATCAGTACAACATCAGCAATACCTCTGATTCAGAAGAAACCAAATTCAGCATCCTAGTAATTGACCTCGGAGGCCTTTCCGATCCAACAACACAAAAGGAGATTGTTGCAAAAGTTGGAGAAGCATCAGAGACATGGGGCTTCTTCCAGATAGTCAACCATGGAATACCCGTTGCTGTTCTTGACGAGATTCAAAATGGGGTACGTGGATTTTATGATCAAGACGCTGAGGTGAAGAAACAGTTTTACAGTCGCGATGACTTCAGCAGGCCTTTGCAGTACAATAGCAACTTTGATCTATATAGTGCGCCGTCAACTAATTGGAGGGACACTTTCATGTGTTACATGGCTCCCACTCCAACAAAGCCAGAAGACTTGCCCCAAGTATTCAGGGACGAAATTGCTGACTACTCGAAGGAACTAATGAAGTTGGGGAAGATATTGTTTGAGTTGTTGTCCGAGGCTCTTGGACTCGAGCCAAGTCACTTGAATGACATAGATTGTGGTGAGGGGCTTCTGGTTTTAGGCCATTACTATCCTGCTTGTCCACAACCGGAATTAACTTTAGGCACAAGCAAGCATGCGGACAGTGGCTTCATCACAGTCCTCTTGCAAGATCATATCGGTGGTCTACAGGTTCTTCATCAGAACAAGTGGATTGATGTTCCTCCTGTGACTGGGGCTTTAGTGCTTATATCAAATGACAGATTCAAAAGTGTAGAGCACAGGGTACTGGCAAACCATAGAGGTCCAAGGATATCTGTTGCGAGCTTTTTCTGCACAGGGATGCTGCCATCGACAAAGCTTTATGGACCTATCAAGGAGTTATTATCAGAAGACAATCCTCCAAAGTACAGGGACACTACTGTGAGGGACTATGTTGCGTACCGCAACCAGAAAGGCCTCGATGGTAAATCTGGCTTGTCTCATGTCAAGCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2OG-FeII_Oxy DIOX_N

Protein Analysis

361

Amino Acids

40.36

Weight (kDa)

5.32

Isoelectric Point (pI)

32.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 68 - 171 1.2e-18 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 223 - 308 5e-25 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000054)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03400 AT1G03400 AT1G03410 AT1G03410 AT1G04350 AT1G06620 AT1G06620 AT1G06640 AT1G06640 AT1G06640 AT1G06645 AT1G06650 AT1G06650 AT2G25450 AT2G30830 AT2G30840 AT2G30840 AT2G30840 AT3G61400 AT3G61400 AT5G43440 AT5G43440 AT5G43450 AT5G43450 AT5G59530 AT5G59540 AT5G59540
fragaria_vesca FvH4_2g03190 FvH4_2g03220 FvH4_3g07861 FvH4_3g31880 FvH4_3g31880 FvH4_3g31880 FvH4_4g03241 FvH4_4g03250 FvH4_4g03251 FvH4_4g03260 FvH4_4g03300 FvH4_4g03301 FvH4_4g03301 FvH4_4g03301 FvH4_4g03302 FvH4_4g03303 FvH4_4g03303 FvH4_4g03304 FvH4_4g03305 FvH4_4g03323 FvH4_4g03323 FvH4_5g19290 FvH4_5g19290 FvH4_5g19290 FvH4_5g19291 FvH4_5g19291 FvH4_5g19310 FvH4_5g19310 FvH4_5g19310 FvH4_5g19320 FvH4_5g19321 FvH4_5g19321 FvH4_5g19321 FvH4_7g31470
malus_domestica MD00G1220300.v1.1 MD02G1050800.v1.1 MD02G1053200.v1.1 MD02G1053300.v1.1 MD02G1054900.v1.1 MD03G1032300.v1.1 MD03G1245000.v1.1 MD03G1245300.v1.1 MD05G1014200.v1.1 MD13G1210900.v1.1 MD13G1211000.v1.1 MD13G1211100.v1.1 MD13G1211200.v1.1 MD13G1211800.v1.1 MD13G1211900.v1.1 MD13G1212000.v1.1 MD16G1214100.v1.1 MD16G1214300.v1.1 MD16G1214400.v1.1 MD16G1214600.v1.1 MD16G1215000.v1.1 MD16G1215200.v1.1 MD16G1215300.v1.1 MD16G1215500.v1.1 MD16G1271000.v1.1
prunus_persica Prupe.1G035500_v2.0.a1 Prupe.1G035700_v2.0.a1 Prupe.1G035800_v2.0.a1 Prupe.1G035900_v2.0.a1 Prupe.1G036000_v2.0.a1 Prupe.1G036100_v2.0.a1 Prupe.1G036200_v2.0.a1 Prupe.1G036400_v2.0.a1 Prupe.1G036500_v2.0.a1 Prupe.1G036600_v2.0.a1 Prupe.1G036700_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G191000_v2.0.a1 Prupe.1G191100_v2.0.a1
pyrus_communis pycom13g18340 pycom13g18350 pycom13g18380 pycom16g17990 pycom16g18010 pycom16g18020
rosa_chinensis RchiOBHm_Chr2g0124051 RchiOBHm_Chr4g0391811 RchiOBHm_Chr4g0391931 RchiOBHm_Chr4g0391961 RchiOBHm_Chr4g0391971 RchiOBHm_Chr4g0391981 RchiOBHm_Chr4g0391991 RchiOBHm_Chr4g0392031 RchiOBHm_Chr4g0392051 RchiOBHm_Chr4g0392061 RchiOBHm_Chr4g0392071 RchiOBHm_Chr4g0392081 RchiOBHm_Chr4g0392091 RchiOBHm_Chr4g0392111 RchiOBHm_Chr4g0392121 RchiOBHm_Chr4g0392131 RchiOBHm_Chr4g0392141 RchiOBHm_Chr4g0392151 RchiOBHm_Chr4g0392211 RchiOBHm_Chr4g0392251 RchiOBHm_Chr4g0392261 RchiOBHm_Chr4g0392301 RchiOBHm_Chr4g0392311 RchiOBHm_Chr4g0392341 RchiOBHm_Chr4g0409221 RchiOBHm_Chr4g0410991 RchiOBHm_Chr4g0429131 RchiOBHm_Chr4g0437051 RchiOBHm_Chr5g0038681 RchiOBHm_Chr5g0047071 RchiOBHm_Chr5g0058651 RchiOBHm_Chr6g0248121 RchiOBHm_Chr6g0248141 RchiOBHm_Chr6g0248291 RchiOBHm_Chr6g0248341 RchiOBHm_Chr6g0248351
rosa_laevigata RLG00000006473 RLG00000006475 RLG00000006667 RLG00000007095 RLG00000009819 RLG00000009820 RLG00000009821 RLG00000009822 RLG00000009825 RLG00000009826 RLG00000009830 RLG00000009831 RLG00000009832 RLG00000009833 RLG00000009834 RLG00000009835 RLG00000009837 RLG00000009838 RLG00000009839 RLG00000009841 RLG00000009842 RLG00000009844 RLG00000009845 RLG00000009846 RLG00000009847 RLG00000009848 RLG00000009849 RLG00000015160 RLG00000015161 RLG00000017791 RLG00000018779 RLG00000034461 RLG00000035237
rosa_multiflora Rmu_co8253791.1_g000001 Rmu_co8348827.1_g000001 Rmu_co8400489.1_g000001 Rmu_sc0000383.1_g000003 Rmu_sc0000383.1_g000005 Rmu_sc0000383.1_g000026 Rmu_sc0000846.1_g000012 Rmu_sc0001231.1_g000013 Rmu_sc0001231.1_g000026 Rmu_sc0001231.1_g000028 Rmu_sc0001800.1_g000027 Rmu_sc0003436.1_g000022 Rmu_sc0004104.1_g000004 Rmu_sc0004295.1_g000021 Rmu_sc0004295.1_g000031 Rmu_sc0004928.1_g000002 Rmu_sc0004928.1_g000008 Rmu_sc0004928.1_g000011 Rmu_sc0004928.1_g000027 Rmu_sc0004977.1_g000007 Rmu_sc0005018.1_g000002 Rmu_sc0005091.1_g000026 Rmu_sc0005091.1_g000032 Rmu_sc0005091.1_g000033 Rmu_sc0005817.1_g000003 Rmu_sc0005817.1_g000008 Rmu_sc0012482.1_g000002 Rmu_sc0014210.1_g000001 Rmu_sc0016150.1_g000001 Rmu_sc0029701.1_g000002 Rmu_sc0036585.1_g000001 Rmu_sc0037489.1_g000002
rosa_roxburghii Rroxscaffold_1G00021790 Rroxscaffold_1G00021800 Rroxscaffold_1G00034360 Rroxscaffold_2G00120130 Rroxscaffold_5G00337210 Rroxscaffold_5G00337220 Rroxscaffold_5G00337230 Rroxscaffold_5G00337250 Rroxscaffold_5G00337260 Rroxscaffold_5G00337270 Rroxscaffold_5G00337300 Rroxscaffold_5G00337310 Rroxscaffold_5G00337320 Rroxscaffold_5G00337330 Rroxscaffold_5G00337350 Rroxscaffold_5G00337370 Rroxscaffold_5G00337390 Rroxscaffold_5G00337400 Rroxscaffold_5G00337420 Rroxscaffold_5G00337430 Rroxscaffold_5G00337450 Rroxscaffold_5G00337470 Rroxscaffold_5G00337480 Rroxscaffold_5G00337520 Rroxscaffold_5G00378130 Rroxscaffold_6G00397800 Rroxscaffold_7G00213320 Rroxscaffold_7G00213390 Rroxscaffold_7G00213420 Rroxscaffold_7G00213470
rosa_rugosa Rorug02G0070100 Rorug02G0070100 Rorug02G0070100 Rorug02G0128600 Rorug02G0128700 Rorug02G0128800 Rorug02G0128900 Rorug02G0248400 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337100 Rorug03G0337200 Rorug03G0337300 Rorug03G0337600 Rorug03G0337700 Rorug03G0337800 Rorug03G0337900 Rorug03G0337900 Rorug03G0338000 Rorug03G0338100 Rorug03G0338200 Rorug04G0233200.1 Rorug04G0297900 Rorug05G0233700 Rorug05G0316700 Rorug05G0530800 Rorug05G0530900
rosa_samantha Rh2AG307400 Rh2BG316500 Rh2DG331200 Rh4AG039300 Rh4AG039400 Rh4AG039600 Rh4AG039700 Rh4AG039900 Rh4AG040000 Rh4AG040100 Rh4AG040300 Rh4AG040500 Rh4AG040700 Rh4AG041000 Rh4AG041100 Rh4AG041600 Rh4AG041800 Rh4AG041900 Rh4AG352400 Rh4BG033200 Rh4BG034100 Rh4BG034300 Rh4BG034700 Rh4BG034800 Rh4BG035200 Rh4BG035400 Rh4BG036000 Rh4BG036200 Rh4BG036300 Rh4BG036500 Rh4BG036800 Rh4BG361700 Rh4CG042000 Rh4CG042200 Rh4CG042300 Rh4CG042500 Rh4CG042600 Rh4CG042800 Rh4CG043200 Rh4CG043400 Rh4CG043500 Rh4CG043700 Rh4CG043800 Rh4CG044200 Rh4CG044500 Rh4CG044700 Rh4CG177000 Rh4CG310600 Rh4CG376000 Rh4DG036300 Rh4DG036900 Rh4DG037000 Rh4DG037100 Rh4DG037200 Rh4DG037300 Rh4DG037500 Rh4DG037700 Rh4DG037800 Rh4DG037900 Rh4DG038000 Rh4DG038200 Rh4DG038500 Rh4DG038700 Rh4DG038900 Rh4DG159600 Rh5CG347900 Rh5DG409900 Rh6AG045300 Rh6AG045800 Rh6AG046000 Rh6AG046100 Rh6BG040600 Rh6BG040700 Rh6BG042200 Rh6BG042700 Rh6BG042800 Rh6DG035900 Rh6DG036100 Rh6DG036200
rosa_wichuraiana Rw0G010420 Rw2G024780 Rw4G003020 Rw4G003070 Rw4G003080 Rw4G003090 Rw4G003100 Rw4G003130 Rw4G003140 Rw4G003150 Rw4G003180 Rw4G003190 Rw4G003200 Rw4G003210 Rw4G003220 Rw4G003240 Rw4G003270 Rw4G025050 Rw4G030850 Rw6G003930 Rw6G004000 Rw6G004030 Rw6G004040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 775
AccII CGCG 1 cut(s) 399
AciI CCGC 2 cut(s) 728, 1033
AclWI GGATC 1 cut(s) 221
AcsI RAATTY 2 cut(s) 126, 188
AcuI CTGAAG 1 cut(s) 391
AfaI GTAC 6 cut(s) 152, 348, 425, 876, 998, 1031
AfiI CCNNNNNNNGG 1 cut(s) 821
AgsI TTSAA 3 cut(s) 338, 634, 856
AleI CACNNNNGTG 1 cut(s) 1010
AluBI AGCT 4 cut(s) 62, 915, 949, 1081
AluI AGCT 4 cut(s) 62, 915, 949, 1081
Alw21I GWGCWC 1 cut(s) 870
Alw26I GTCTC 2 cut(s) 269, 1074
AlwI GGATC 1 cut(s) 221
Ama87I CYCGRG 1 cut(s) 617
AoxI GGCC 5 cut(s) 91, 217, 413, 670, 1045
ApeKI GCWGC 2 cut(s) 26, 934
ApoI RAATTY 2 cut(s) 126, 188
AspLEI GCGC 1 cut(s) 454
AspS9I GGNCC 2 cut(s) 893, 956
AsuHPI GGTGA 2 cut(s) 388, 662
AvaI CYCGRG 1 cut(s) 617
AvaII GGWCC 2 cut(s) 893, 956
BbsI GAAGAC 2 cut(s) 522, 987
Bbv12I GWGCWC 1 cut(s) 870
BbvCI CCTCAGC 1 cut(s) 372
BbvI GCAGC 2 cut(s) 38, 921
BccI CCATC 2 cut(s) 946, 1046
BceAI ACGGC 1 cut(s) 439
BclI TGATCA 1 cut(s) 361
BcoDI GTCTC 2 cut(s) 269, 1074
BfaI CTAG 1 cut(s) 200
BfmI CTRYAG 1 cut(s) 776
BisI GCNGC 2 cut(s) 27, 935
BlsI GCNGC 2 cut(s) 28, 936
Bme18I GGWCC 2 cut(s) 893, 956
BmeT110I CYCGRG 1 cut(s) 617
BmgT120I GGNCC 2 cut(s) 893, 956
BmiI GGNNCC 1 cut(s) 495
BmrI ACTGGG 1 cut(s) 831
BmsI GCATC 4 cut(s) 91, 204, 278, 921
BmuI ACTGGG 1 cut(s) 831
BpiI GAAGAC 2 cut(s) 522, 987
Bpu10I CCTNAGC 1 cut(s) 372
BsaAI YACGTR 1 cut(s) 350
BsaJI CCNNGG 4 cut(s) 211, 304, 603, 896
BsaWI WCCGGW 1 cut(s) 697
Bsc4I CCNNNNNNNGG 1 cut(s) 821
Bse1I ACTGG 2 cut(s) 826, 882
BseDI CCNNGG 4 cut(s) 211, 304, 603, 896
BseGI GGATG 3 cut(s) 136, 195, 936
BseLI CCNNNNNNNGG 1 cut(s) 821
BseMII CTCAG 1 cut(s) 363
BseNI ACTGG 2 cut(s) 826, 882
BseXI GCAGC 2 cut(s) 38, 921
BsgI GTGCAG 1 cut(s) 907
Bsh1236I CGCG 1 cut(s) 399
BshFI GGCC 5 cut(s) 93, 219, 415, 672, 1047
BsiHKAI GWGCWC 1 cut(s) 870
BsiHKCI CYCGRG 1 cut(s) 617
BsiSI CCGG 1 cut(s) 698
BslFI GGGAC 4 cut(s) 485, 551, 1016, 1031
BslI CCNNNNNNNGG 1 cut(s) 821
BsmAI GTCTC 2 cut(s) 269, 1074
BsmFI GGGAC 4 cut(s) 485, 551, 1016, 1031
BsnI GGCC 5 cut(s) 93, 219, 415, 672, 1047
BsoBI CYCGRG 1 cut(s) 617
Bsp1286I GDGCHC 1 cut(s) 870
Bsp143I GATC 5 cut(s) 145, 226, 361, 439, 760
Bsp19I CCATGG 1 cut(s) 304
Bsp68I TCGCGA 1 cut(s) 399
BspACI CCGC 2 cut(s) 728, 1033
BspANI GGCC 5 cut(s) 93, 219, 415, 672, 1047
BspCNI CTCAG 1 cut(s) 364
BspFNI CGCG 1 cut(s) 399
BspLI GGNNCC 1 cut(s) 495
BspPI GGATC 1 cut(s) 221
BsrI ACTGG 2 cut(s) 826, 882
BssECI CCNNGG 4 cut(s) 211, 304, 603, 896
BssMI GATC 5 cut(s) 145, 226, 361, 439, 760
BssT1I CCWWGG 2 cut(s) 304, 896
Bst4CI ACNGT 5 cut(s) 387, 395, 734, 748, 1012
BstBAI YACGTR 1 cut(s) 350
BstC8I GCNNGC 5 cut(s) 106, 413, 722, 726, 913
BstDEI CTNAG 1 cut(s) 372
BstDSI CCRYGG 1 cut(s) 304
BstF5I GGATG 3 cut(s) 136, 195, 936
BstFNI CGCG 1 cut(s) 399
BstHHI GCGC 1 cut(s) 454
BstKTI GATC 5 cut(s) 148, 229, 364, 442, 763
BstMAI GTCTC 2 cut(s) 269, 1074
BstMBI GATC 5 cut(s) 145, 226, 361, 439, 760
BstMWI GCNNNNNNNGC 1 cut(s) 921
BstNSI RCATGY 1 cut(s) 728
BstSFI CTRYAG 1 cut(s) 776
BstUI CGCG 1 cut(s) 399
BstV1I GCAGC 2 cut(s) 38, 921
BstV2I GAAGAC 2 cut(s) 522, 987
BsuRI GGCC 5 cut(s) 93, 219, 415, 672, 1047
BtgI CCRYGG 1 cut(s) 304
BtgZI GCGATG 1 cut(s) 414
BtsCI GGATG 3 cut(s) 136, 195, 936
BtsIMutI CAGTG 1 cut(s) 739
BtuMI TCGCGA 1 cut(s) 399
Cac8I GCNNGC 5 cut(s) 106, 413, 722, 726, 913
CfoI GCGC 1 cut(s) 454
Cfr13I GGNCC 2 cut(s) 893, 956
CseI GACGC 1 cut(s) 377
Csp6I GTAC 6 cut(s) 151, 347, 424, 875, 997, 1030
CviAII CATG 6 cut(s) 279, 305, 481, 490, 725, 1073
CviQI GTAC 6 cut(s) 151, 347, 424, 875, 997, 1030
DdeI CTNAG 1 cut(s) 372
DpnI GATC 5 cut(s) 147, 228, 363, 441, 762
DpnII GATC 5 cut(s) 145, 226, 361, 439, 760
Eco130I CCWWGG 2 cut(s) 304, 896
Eco147I AGGCCT 4 cut(s) 93, 219, 415, 1047
Eco32I GATATC 1 cut(s) 903
Eco47I GGWCC 2 cut(s) 893, 956
Eco57I CTGAAG 1 cut(s) 391
Eco88I CYCGRG 1 cut(s) 617
EcoRV GATATC 1 cut(s) 903
EcoT14I CCWWGG 2 cut(s) 304, 896
ErhI CCWWGG 2 cut(s) 304, 896
FaeI CATG 6 cut(s) 282, 308, 484, 493, 728, 1076
FaqI GGGAC 4 cut(s) 485, 551, 1016, 1031
FatI CATG 6 cut(s) 278, 304, 480, 489, 724, 1072
FbaI TGATCA 1 cut(s) 361
FblI GTMKAC 1 cut(s) 775
Fnu4HI GCNGC 2 cut(s) 27, 935
FokI GGATG 3 cut(s) 123, 182, 943
Fsp4HI GCNGC 2 cut(s) 27, 935
FspBI CTAG 1 cut(s) 200
GlaI GCGC 1 cut(s) 453
GluI GCNGC 2 cut(s) 27, 935
HaeIII GGCC 5 cut(s) 93, 219, 415, 672, 1047
HapII CCGG 1 cut(s) 698
HgaI GACGC 1 cut(s) 377
HhaI GCGC 1 cut(s) 454
Hin1II CATG 6 cut(s) 282, 308, 484, 493, 728, 1076
Hin6I GCGC 1 cut(s) 452
HinP1I GCGC 1 cut(s) 452
HincII GTYRAC 2 cut(s) 301, 459
HindII GTYRAC 2 cut(s) 301, 459
HindIII AAGCTT 3 cut(s) 60, 947, 1079
HinfI GANTC 5 cut(s) 118, 173, 334, 615, 852
HpaII CCGG 1 cut(s) 698
HphI GGTGA 2 cut(s) 388, 662
Hpy166II GTNNAC 5 cut(s) 53, 301, 459, 692, 776
Hpy188I TCNGA 8 cut(s) 172, 178, 215, 226, 274, 604, 792, 979
Hpy188III TCNNGA 4 cut(s) 292, 326, 365, 398
Hpy8I GTNNAC 5 cut(s) 53, 301, 459, 692, 776
HpyAV CCTTC 1 cut(s) 553
HpyCH4III ACNGT 5 cut(s) 387, 395, 734, 748, 1012
HpyCH4IV ACGT 1 cut(s) 349
HpyCH4V TGCA 5 cut(s) 26, 254, 421, 757, 924
HpyF10VI GCNNNNNNNGC 1 cut(s) 921
HpyF3I CTNAG 1 cut(s) 372
HpySE526I ACGT 1 cut(s) 349
Hsp92II CATG 6 cut(s) 282, 308, 484, 493, 728, 1076
HspAI GCGC 1 cut(s) 452
Ksp22I TGATCA 1 cut(s) 361
Kzo9I GATC 5 cut(s) 145, 226, 361, 439, 760
LmnI GCTCC 1 cut(s) 499
Lsp1109I GCAGC 2 cut(s) 38, 921
LweI GCATC 4 cut(s) 91, 204, 278, 921
MaeI CTAG 1 cut(s) 200
MaeII ACGT 1 cut(s) 349
MaeIII GTNAC 3 cut(s) 485, 626, 817
MalI GATC 5 cut(s) 147, 228, 363, 441, 762
MboI GATC 5 cut(s) 145, 226, 361, 439, 760
MboII GAAGA 7 cut(s) 191, 280, 391, 527, 592, 776, 992
MhlI GDGCHC 1 cut(s) 870
MluCI AATT 7 cut(s) 34, 126, 188, 204, 463, 543, 701
MlyI GAGTC 1 cut(s) 609
MmeI TCCRAC 3 cut(s) 241, 254, 527
MseI TTAA 1 cut(s) 704
MslI CAYNNNNRTG 5 cut(s) 479, 633, 768, 929, 1010
MspI CCGG 1 cut(s) 698
MvnI CGCG 1 cut(s) 399
MwoI GCNNNNNNNGC 1 cut(s) 921
NcoI CCATGG 1 cut(s) 304
NdeII GATC 5 cut(s) 145, 226, 361, 439, 760
NlaIII CATG 6 cut(s) 282, 308, 484, 493, 728, 1076
NlaIV GGNNCC 1 cut(s) 495
NmuCI GTSAC 2 cut(s) 626, 817
NruI TCGCGA 1 cut(s) 399
NspI RCATGY 1 cut(s) 728
OliI CACNNNNGTG 1 cut(s) 1010
PaeI GCATGC 1 cut(s) 728
PaeR7I CTCGAG 1 cut(s) 617
PceI AGGCCT 4 cut(s) 93, 219, 415, 1047
PfeI GAWTC 4 cut(s) 118, 173, 334, 852
PkrI GCNGC 2 cut(s) 28, 936
PleI GAGTC 1 cut(s) 609
PpsI GAGTC 1 cut(s) 609
Ppu21I YACGTR 1 cut(s) 350
PspN4I GGNNCC 1 cut(s) 495
PspPI GGNCC 2 cut(s) 893, 956
PspXI VCTCGAGB 1 cut(s) 617
RruI TCGCGA 1 cut(s) 399
RsaI GTAC 6 cut(s) 152, 348, 425, 876, 998, 1031
RsaNI GTAC 6 cut(s) 151, 347, 424, 875, 997, 1030
RseI CAYNNNNRTG 5 cut(s) 479, 633, 768, 929, 1010
SaqAI TTAA 1 cut(s) 704
SatI GCNGC 2 cut(s) 27, 935
Sau3AI GATC 5 cut(s) 145, 226, 361, 439, 760
Sau96I GGNCC 2 cut(s) 893, 956
SchI GAGTC 1 cut(s) 609
SduI GDGCHC 1 cut(s) 870
SfaNI GCATC 4 cut(s) 91, 204, 278, 921
SfcI CTRYAG 1 cut(s) 776
Sfr274I CTCGAG 1 cut(s) 617
SinI GGWCC 2 cut(s) 893, 956
SlaI CTCGAG 1 cut(s) 617
SmiMI CAYNNNNRTG 5 cut(s) 479, 633, 768, 929, 1010
SmlI CTYRAG 1 cut(s) 617
SmoI CTYRAG 1 cut(s) 617
SphI GCATGC 1 cut(s) 728
Sse9I AATT 7 cut(s) 34, 126, 188, 204, 463, 543, 701
SseBI AGGCCT 4 cut(s) 93, 219, 415, 1047
SsiI CCGC 2 cut(s) 728, 1033
SspMI CTAG 1 cut(s) 200
StuI AGGCCT 4 cut(s) 93, 219, 415, 1047
StyI CCWWGG 2 cut(s) 304, 896
TaaI ACNGT 5 cut(s) 387, 395, 734, 748, 1012
TaiI ACGT 1 cut(s) 352
TaqI TCGA 5 cut(s) 124, 557, 618, 941, 1050
TasI AATT 7 cut(s) 34, 126, 188, 204, 463, 543, 701
TatI WGTACW 3 cut(s) 150, 423, 996
TfiI GAWTC 4 cut(s) 118, 173, 334, 852
Tru1I TTAA 1 cut(s) 704
Tru9I TTAA 1 cut(s) 704
TscAI CASTG 1 cut(s) 739
TseFI GTSAC 2 cut(s) 626, 817
TseI GCWGC 2 cut(s) 26, 934
Tsp45I GTSAC 2 cut(s) 626, 817
TspDTI ATGAA 5 cut(s) 122, 469, 584, 730, 776
TspRI CASTG 1 cut(s) 739
VpaK11BI GGWCC 2 cut(s) 893, 956
XapI RAATTY 2 cut(s) 126, 188
XceI RCATGY 1 cut(s) 728
XhoI CTCGAG 1 cut(s) 617
XmiI GTMKAC 1 cut(s) 775
XspI CTAG 1 cut(s) 200
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.