FvH4_5g19321

Belongs to the iron ascorbate-dependent oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000054
Physical Location & Seq
Forward (+)
11183081 .. 11185686
2606 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g19321.t1

Sequence Viewer

Length: 858 bp
ATGGTGGACACAAGTGACCGCACAAGTGAACTAAAAGCATTTGATGATACAAAAGCCGGTGTGAAAGGACTACTCGATGCAGGAGTCGCAACAATCCCTCGCATTTTCCACTCCAGATCACAACCAAATGTTGATCAGAGGGAAGGAGGTGATGATGATGCCCGGTTCAGTATTCCAACCATCGATCTTCAAGGCGGCAAAATCGAAGCAGACTCAGCTTTACGAGCTGAGGTCATGGAGAAAGTTCGGCATGCGTGTGAGAAATGGGGTTTCTTTCAAGTAGTGAATCATGGAATTCCTGTAAATGTTTTGGATGAGGTGATTCGACGGATACGCGAGTTCCATGAGCAGGATAGTGTGCTAAAGAAAGAGTTCTATACAAGGACTCCCGGGAAGAAAGTGTATTATCATTCTAACTATGATTTGTACCAAGCTTCATCAACTGACTGGAGAGACACACTCGGCTGTTTCATGGCTCCTAATCCACCCAAACCAGAAGAATTACCCTCAGTATGCAGTGATATAGTGATTGAGTACTCAAAGCATGTGATGGAGCTGGGATTAACATTGTTTGAGATACTATCTGAGTCTCTTGGGCTTAATCCGAACTATCTTAAAGACATGAATTGCGCCGAGGGGCTTCTTCTACTGGGTCACTGCTATCCAGCATGCCCTGAGCCAGAATTGACATTCGGCGCCAGCAAGCACACTGATGGTACCTTCATCACCATTCTTTTGCAAGACCAAGTAGGTGGTCTCCAAGCTTTATATGAGAATCGATGGGTTAATGTTCCCCCCATGCATGGAGCTCTAGTTGTCAATGTTGGAGACCTTCTTCAGGCAACTCATAACAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2OG-FeII_Oxy DIOX_N

Protein Analysis

286

Amino Acids

31.85

Weight (kDa)

5.2

Isoelectric Point (pI)

44.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 58 - 160 5e-20 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 216 - 284 5.4e-20 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000054)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03400 AT1G03400 AT1G03410 AT1G03410 AT1G04350 AT1G06620 AT1G06620 AT1G06640 AT1G06640 AT1G06640 AT1G06645 AT1G06650 AT1G06650 AT2G25450 AT2G30830 AT2G30840 AT2G30840 AT2G30840 AT3G61400 AT3G61400 AT5G43440 AT5G43440 AT5G43450 AT5G43450 AT5G59530 AT5G59540 AT5G59540
fragaria_vesca FvH4_2g03190 FvH4_2g03220 FvH4_3g07861 FvH4_3g31880 FvH4_3g31880 FvH4_3g31880 FvH4_4g03241 FvH4_4g03250 FvH4_4g03251 FvH4_4g03260 FvH4_4g03300 FvH4_4g03301 FvH4_4g03301 FvH4_4g03301 FvH4_4g03302 FvH4_4g03303 FvH4_4g03303 FvH4_4g03304 FvH4_4g03305 FvH4_4g03323 FvH4_4g03323 FvH4_5g19290 FvH4_5g19290 FvH4_5g19290 FvH4_5g19291 FvH4_5g19291 FvH4_5g19310 FvH4_5g19310 FvH4_5g19310 FvH4_5g19320 FvH4_5g19321 FvH4_5g19321 FvH4_5g19321 FvH4_7g31470
malus_domestica MD00G1220300.v1.1 MD02G1050800.v1.1 MD02G1053200.v1.1 MD02G1053300.v1.1 MD02G1054900.v1.1 MD03G1032300.v1.1 MD03G1245000.v1.1 MD03G1245300.v1.1 MD05G1014200.v1.1 MD13G1210900.v1.1 MD13G1211000.v1.1 MD13G1211100.v1.1 MD13G1211200.v1.1 MD13G1211800.v1.1 MD13G1211900.v1.1 MD13G1212000.v1.1 MD16G1214100.v1.1 MD16G1214300.v1.1 MD16G1214400.v1.1 MD16G1214600.v1.1 MD16G1215000.v1.1 MD16G1215200.v1.1 MD16G1215300.v1.1 MD16G1215500.v1.1 MD16G1271000.v1.1
prunus_persica Prupe.1G035500_v2.0.a1 Prupe.1G035700_v2.0.a1 Prupe.1G035800_v2.0.a1 Prupe.1G035900_v2.0.a1 Prupe.1G036000_v2.0.a1 Prupe.1G036100_v2.0.a1 Prupe.1G036200_v2.0.a1 Prupe.1G036400_v2.0.a1 Prupe.1G036500_v2.0.a1 Prupe.1G036600_v2.0.a1 Prupe.1G036700_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G191000_v2.0.a1 Prupe.1G191100_v2.0.a1
pyrus_communis pycom13g18340 pycom13g18350 pycom13g18380 pycom16g17990 pycom16g18010 pycom16g18020
rosa_chinensis RchiOBHm_Chr2g0124051 RchiOBHm_Chr4g0391811 RchiOBHm_Chr4g0391931 RchiOBHm_Chr4g0391961 RchiOBHm_Chr4g0391971 RchiOBHm_Chr4g0391981 RchiOBHm_Chr4g0391991 RchiOBHm_Chr4g0392031 RchiOBHm_Chr4g0392051 RchiOBHm_Chr4g0392061 RchiOBHm_Chr4g0392071 RchiOBHm_Chr4g0392081 RchiOBHm_Chr4g0392091 RchiOBHm_Chr4g0392111 RchiOBHm_Chr4g0392121 RchiOBHm_Chr4g0392131 RchiOBHm_Chr4g0392141 RchiOBHm_Chr4g0392151 RchiOBHm_Chr4g0392211 RchiOBHm_Chr4g0392251 RchiOBHm_Chr4g0392261 RchiOBHm_Chr4g0392301 RchiOBHm_Chr4g0392311 RchiOBHm_Chr4g0392341 RchiOBHm_Chr4g0409221 RchiOBHm_Chr4g0410991 RchiOBHm_Chr4g0429131 RchiOBHm_Chr4g0437051 RchiOBHm_Chr5g0038681 RchiOBHm_Chr5g0047071 RchiOBHm_Chr5g0058651 RchiOBHm_Chr6g0248121 RchiOBHm_Chr6g0248141 RchiOBHm_Chr6g0248291 RchiOBHm_Chr6g0248341 RchiOBHm_Chr6g0248351
rosa_laevigata RLG00000006473 RLG00000006475 RLG00000006667 RLG00000007095 RLG00000009819 RLG00000009820 RLG00000009821 RLG00000009822 RLG00000009825 RLG00000009826 RLG00000009830 RLG00000009831 RLG00000009832 RLG00000009833 RLG00000009834 RLG00000009835 RLG00000009837 RLG00000009838 RLG00000009839 RLG00000009841 RLG00000009842 RLG00000009844 RLG00000009845 RLG00000009846 RLG00000009847 RLG00000009848 RLG00000009849 RLG00000015160 RLG00000015161 RLG00000017791 RLG00000018779 RLG00000034461 RLG00000035237
rosa_multiflora Rmu_co8253791.1_g000001 Rmu_co8348827.1_g000001 Rmu_co8400489.1_g000001 Rmu_sc0000383.1_g000003 Rmu_sc0000383.1_g000005 Rmu_sc0000383.1_g000026 Rmu_sc0000846.1_g000012 Rmu_sc0001231.1_g000013 Rmu_sc0001231.1_g000026 Rmu_sc0001231.1_g000028 Rmu_sc0001800.1_g000027 Rmu_sc0003436.1_g000022 Rmu_sc0004104.1_g000004 Rmu_sc0004295.1_g000021 Rmu_sc0004295.1_g000031 Rmu_sc0004928.1_g000002 Rmu_sc0004928.1_g000008 Rmu_sc0004928.1_g000011 Rmu_sc0004928.1_g000027 Rmu_sc0004977.1_g000007 Rmu_sc0005018.1_g000002 Rmu_sc0005091.1_g000026 Rmu_sc0005091.1_g000032 Rmu_sc0005091.1_g000033 Rmu_sc0005817.1_g000003 Rmu_sc0005817.1_g000008 Rmu_sc0012482.1_g000002 Rmu_sc0014210.1_g000001 Rmu_sc0016150.1_g000001 Rmu_sc0029701.1_g000002 Rmu_sc0036585.1_g000001 Rmu_sc0037489.1_g000002
rosa_roxburghii Rroxscaffold_1G00021790 Rroxscaffold_1G00021800 Rroxscaffold_1G00034360 Rroxscaffold_2G00120130 Rroxscaffold_5G00337210 Rroxscaffold_5G00337220 Rroxscaffold_5G00337230 Rroxscaffold_5G00337250 Rroxscaffold_5G00337260 Rroxscaffold_5G00337270 Rroxscaffold_5G00337300 Rroxscaffold_5G00337310 Rroxscaffold_5G00337320 Rroxscaffold_5G00337330 Rroxscaffold_5G00337350 Rroxscaffold_5G00337370 Rroxscaffold_5G00337390 Rroxscaffold_5G00337400 Rroxscaffold_5G00337420 Rroxscaffold_5G00337430 Rroxscaffold_5G00337450 Rroxscaffold_5G00337470 Rroxscaffold_5G00337480 Rroxscaffold_5G00337520 Rroxscaffold_5G00378130 Rroxscaffold_6G00397800 Rroxscaffold_7G00213320 Rroxscaffold_7G00213390 Rroxscaffold_7G00213420 Rroxscaffold_7G00213470
rosa_rugosa Rorug02G0070100 Rorug02G0070100 Rorug02G0070100 Rorug02G0128600 Rorug02G0128700 Rorug02G0128800 Rorug02G0128900 Rorug02G0248400 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337100 Rorug03G0337200 Rorug03G0337300 Rorug03G0337600 Rorug03G0337700 Rorug03G0337800 Rorug03G0337900 Rorug03G0337900 Rorug03G0338000 Rorug03G0338100 Rorug03G0338200 Rorug04G0233200.1 Rorug04G0297900 Rorug05G0233700 Rorug05G0316700 Rorug05G0530800 Rorug05G0530900
rosa_samantha Rh2AG307400 Rh2BG316500 Rh2DG331200 Rh4AG039300 Rh4AG039400 Rh4AG039600 Rh4AG039700 Rh4AG039900 Rh4AG040000 Rh4AG040100 Rh4AG040300 Rh4AG040500 Rh4AG040700 Rh4AG041000 Rh4AG041100 Rh4AG041600 Rh4AG041800 Rh4AG041900 Rh4AG352400 Rh4BG033200 Rh4BG034100 Rh4BG034300 Rh4BG034700 Rh4BG034800 Rh4BG035200 Rh4BG035400 Rh4BG036000 Rh4BG036200 Rh4BG036300 Rh4BG036500 Rh4BG036800 Rh4BG361700 Rh4CG042000 Rh4CG042200 Rh4CG042300 Rh4CG042500 Rh4CG042600 Rh4CG042800 Rh4CG043200 Rh4CG043400 Rh4CG043500 Rh4CG043700 Rh4CG043800 Rh4CG044200 Rh4CG044500 Rh4CG044700 Rh4CG177000 Rh4CG310600 Rh4CG376000 Rh4DG036300 Rh4DG036900 Rh4DG037000 Rh4DG037100 Rh4DG037200 Rh4DG037300 Rh4DG037500 Rh4DG037700 Rh4DG037800 Rh4DG037900 Rh4DG038000 Rh4DG038200 Rh4DG038500 Rh4DG038700 Rh4DG038900 Rh4DG159600 Rh5CG347900 Rh5DG409900 Rh6AG045300 Rh6AG045800 Rh6AG046000 Rh6AG046100 Rh6BG040600 Rh6BG040700 Rh6BG042200 Rh6BG042700 Rh6BG042800 Rh6DG035900 Rh6DG036100 Rh6DG036200
rosa_wichuraiana Rw0G010420 Rw2G024780 Rw4G003020 Rw4G003070 Rw4G003080 Rw4G003090 Rw4G003100 Rw4G003130 Rw4G003140 Rw4G003150 Rw4G003180 Rw4G003190 Rw4G003200 Rw4G003210 Rw4G003220 Rw4G003240 Rw4G003270 Rw4G025050 Rw4G030850 Rw6G003930 Rw6G004000 Rw6G004030 Rw6G004040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 716
AccB1I GGYRCC 2 cut(s) 695, 716
AccII CGCG 1 cut(s) 336
AciI CCGC 2 cut(s) 19, 195
AcsI RAATTY 1 cut(s) 294
AcuI CTGAAG 1 cut(s) 821
AcyI GRCGYC 1 cut(s) 696
AfaI GTAC 3 cut(s) 428, 536, 718
AfiI CCNNNNNNNGG 3 cut(s) 349, 803, 838
AgsI TTSAA 2 cut(s) 191, 278
AluBI AGCT 6 cut(s) 218, 227, 434, 556, 764, 809
AluI AGCT 6 cut(s) 218, 227, 434, 556, 764, 809
Alw21I GWGCWC 1 cut(s) 811
Alw26I GTCTC 4 cut(s) 447, 594, 761, 822
Ama87I CYCGRG 1 cut(s) 389
ApoI RAATTY 1 cut(s) 294
Asp700I GAANNNNTTC 1 cut(s) 371
Asp718I GGTACC 1 cut(s) 716
AspLEI GCGC 2 cut(s) 632, 698
AsuC2I CCSGG 3 cut(s) 163, 390, 391
AsuHPI GGTGA 3 cut(s) 161, 331, 718
AvaI CYCGRG 1 cut(s) 389
BaeI ACNNNNGTAYC 2 cut(s) 323, 356
BanI GGYRCC 2 cut(s) 695, 716
BanII GRGCYC 1 cut(s) 811
Bbv12I GWGCWC 1 cut(s) 811
BbvCI CCTCAGC 1 cut(s) 228
BccI CCATC 4 cut(s) 188, 544, 707, 774
BciVI GTATCC 1 cut(s) 324
BclI TGATCA 1 cut(s) 133
BcnI CCSGG 3 cut(s) 163, 390, 391
BcoDI GTCTC 4 cut(s) 447, 594, 761, 822
BfaI CTAG 1 cut(s) 812
BfoI RGCGCY 1 cut(s) 699
BfuI GTATCC 1 cut(s) 324
BisI GCNGC 1 cut(s) 196
BlsI GCNGC 1 cut(s) 197
BmcAI AGTACT 1 cut(s) 536
Bme1390I CCNGG 3 cut(s) 163, 390, 391
BmeT110I CYCGRG 1 cut(s) 389
BmiI GGNNCC 3 cut(s) 477, 697, 718
BmrFI CCNGG 3 cut(s) 163, 390, 391
BmrI ACTGGG 1 cut(s) 659
BmsI GCATC 2 cut(s) 67, 148
BmuI ACTGGG 1 cut(s) 659
BplI GAGNNNNNCTC 2 cut(s) 444, 476
BpmI CTGGAG 2 cut(s) 97, 469
Bpu10I CCTNAGC 2 cut(s) 228, 675
BpuMI CCSGG 3 cut(s) 163, 390, 391
Bsa29I ATCGAT 2 cut(s) 183, 778
BsaHI GRCGYC 1 cut(s) 696
BsaI GGTCTC 2 cut(s) 761, 822
BsaJI CCNNGG 2 cut(s) 389, 633
BsaXI ACNNNNNCTCC 4 cut(s) 370, 400, 798, 828
Bsc4I CCNNNNNNNGG 3 cut(s) 349, 803, 838
Bse118I RCCGGY 1 cut(s) 56
Bse1I ACTGG 2 cut(s) 452, 654
BseCI ATCGAT 2 cut(s) 183, 778
BseDI CCNNGG 2 cut(s) 389, 633
BseGI GGATG 1 cut(s) 319
BseLI CCNNNNNNNGG 3 cut(s) 349, 803, 838
BseMII CTCAG 5 cut(s) 219, 228, 522, 576, 666
BseNI ACTGG 2 cut(s) 452, 654
BseYI CCCAGC 1 cut(s) 556
Bsh1236I CGCG 1 cut(s) 336
BshNI GGYRCC 2 cut(s) 695, 716
BshVI ATCGAT 2 cut(s) 183, 778
BsiHKAI GWGCWC 1 cut(s) 811
BsiHKCI CYCGRG 1 cut(s) 389
BsiSI CCGG 3 cut(s) 57, 163, 390
BslI CCNNNNNNNGG 3 cut(s) 349, 803, 838
BsmAI GTCTC 4 cut(s) 447, 594, 761, 822
Bso31I GGTCTC 2 cut(s) 761, 822
BsoBI CYCGRG 1 cut(s) 389
Bsp1286I GDGCHC 1 cut(s) 811
Bsp143I GATC 3 cut(s) 116, 133, 184
BspACI CCGC 2 cut(s) 19, 195
BspCNI CTCAG 5 cut(s) 220, 227, 521, 577, 667
BspDI ATCGAT 2 cut(s) 183, 778
BspFNI CGCG 1 cut(s) 336
BspLI GGNNCC 3 cut(s) 477, 697, 718
BspT107I GGYRCC 2 cut(s) 695, 716
BspTNI GGTCTC 2 cut(s) 761, 822
BsrFI RCCGGY 1 cut(s) 56
BsrI ACTGG 2 cut(s) 452, 654
BssAI RCCGGY 1 cut(s) 56
BssECI CCNNGG 2 cut(s) 389, 633
BssMI GATC 3 cut(s) 116, 133, 184
BssNI GRCGYC 1 cut(s) 696
BstACI GRCGYC 1 cut(s) 696
BstC8I GCNNGC 4 cut(s) 252, 670, 700, 704
BstDEI CTNAG 5 cut(s) 214, 228, 508, 585, 675
BstENI CCTNNNNNAGG 1 cut(s) 836
BstF5I GGATG 1 cut(s) 319
BstFNI CGCG 1 cut(s) 336
BstH2I RGCGCY 1 cut(s) 699
BstHHI GCGC 2 cut(s) 632, 698
BstKTI GATC 3 cut(s) 119, 136, 187
BstMAI GTCTC 4 cut(s) 447, 594, 761, 822
BstMBI GATC 3 cut(s) 116, 133, 184
BstMWI GCNNNNNNNGC 3 cut(s) 86, 215, 224
BstNSI RCATGY 3 cut(s) 254, 548, 672
BstSCI CCNGG 3 cut(s) 161, 388, 389
BstUI CGCG 1 cut(s) 336
BstXI CCANNNNNNTGG 1 cut(s) 752
Bsu15I ATCGAT 2 cut(s) 183, 778
BsuI GTATCC 1 cut(s) 324
BsuTUI ATCGAT 2 cut(s) 183, 778
BtsCI GGATG 1 cut(s) 319
BtsI GCAGTG 2 cut(s) 523, 655
BtsIMutI CAGTG 3 cut(s) 523, 655, 708
Cac8I GCNNGC 4 cut(s) 252, 670, 700, 704
CfoI GCGC 2 cut(s) 632, 698
Cfr10I RCCGGY 1 cut(s) 56
Cfr9I CCCGGG 1 cut(s) 389
ClaI ATCGAT 2 cut(s) 183, 778
Csp6I GTAC 3 cut(s) 427, 535, 717
CviQI GTAC 3 cut(s) 427, 535, 717
DdeI CTNAG 5 cut(s) 214, 228, 508, 585, 675
DinI GGCGCC 1 cut(s) 697
DpnI GATC 3 cut(s) 118, 135, 186
DpnII GATC 3 cut(s) 116, 133, 184
Ecl136II GAGCTC 1 cut(s) 809
Eco24I GRGCYC 1 cut(s) 811
Eco31I GGTCTC 2 cut(s) 761, 822
Eco53kI GAGCTC 1 cut(s) 809
Eco57I CTGAAG 1 cut(s) 821
Eco88I CYCGRG 1 cut(s) 389
EcoICRI GAGCTC 1 cut(s) 809
EcoNI CCTNNNNNAGG 1 cut(s) 836
EcoRI GAATTC 1 cut(s) 294
EcoT22I ATGCAT 1 cut(s) 804
EcoT38I GRGCYC 1 cut(s) 811
EgeI GGCGCC 1 cut(s) 697
EheI GGCGCC 1 cut(s) 697
FbaI TGATCA 1 cut(s) 133
Fnu4HI GCNGC 1 cut(s) 196
FokI GGATG 1 cut(s) 326
FriOI GRGCYC 1 cut(s) 811
Fsp4HI GCNGC 1 cut(s) 196
FspBI CTAG 1 cut(s) 812
GlaI GCGC 2 cut(s) 631, 697
GluI GCNGC 1 cut(s) 196
GsaI CCCAGC 1 cut(s) 560
GsuI CTGGAG 2 cut(s) 97, 469
HaeII RGCGCY 1 cut(s) 699
HapII CCGG 3 cut(s) 57, 163, 390
HhaI GCGC 2 cut(s) 632, 698
Hin1I GRCGYC 1 cut(s) 696
Hin6I GCGC 2 cut(s) 630, 696
HinP1I GCGC 2 cut(s) 630, 696
HindIII AAGCTT 2 cut(s) 432, 762
HinfI GANTC 7 cut(s) 84, 212, 286, 322, 385, 587, 775
HpaII CCGG 3 cut(s) 57, 163, 390
HphI GGTGA 3 cut(s) 161, 331, 718
Hpy166II GTNNAC 2 cut(s) 7, 29
Hpy188I TCNGA 3 cut(s) 138, 586, 606
Hpy188III TCNNGA 1 cut(s) 114
Hpy8I GTNNAC 2 cut(s) 7, 29
Hpy99I CGWCG 1 cut(s) 330
HpyAV CCTTC 3 cut(s) 137, 730, 842
HpyCH4V TGCA 4 cut(s) 80, 516, 739, 802
HpyF10VI GCNNNNNNNGC 3 cut(s) 86, 215, 224
HpyF3I CTNAG 5 cut(s) 214, 228, 508, 585, 675
Hsp92I GRCGYC 1 cut(s) 696
HspAI GCGC 2 cut(s) 630, 696
KasI GGCGCC 1 cut(s) 695
KpnI GGTACC 1 cut(s) 720
Ksp22I TGATCA 1 cut(s) 133
Kzo9I GATC 3 cut(s) 116, 133, 184
LmnI GCTCC 3 cut(s) 481, 553, 806
LweI GCATC 2 cut(s) 67, 148
MaeI CTAG 1 cut(s) 812
MaeIII GTNAC 2 cut(s) 14, 653
MalI GATC 3 cut(s) 118, 135, 186
MboI GATC 3 cut(s) 116, 133, 184
MboII GAAGA 5 cut(s) 179, 406, 509, 635, 827
MhlI GDGCHC 1 cut(s) 811
MluCI AATT 4 cut(s) 294, 500, 625, 683
Mly113I GGCGCC 1 cut(s) 696
MlyI GAGTC 4 cut(s) 93, 206, 379, 596
MmeI TCCRAC 2 cut(s) 200, 805
MnlI CCTC 7 cut(s) 108, 132, 140, 223, 310, 517, 628
Mph1103I ATGCAT 1 cut(s) 804
MroXI GAANNNNTTC 1 cut(s) 371
MseI TTAA 4 cut(s) 563, 600, 615, 786
MslI CAYNNNNRTG 2 cut(s) 255, 711
MspI CCGG 3 cut(s) 57, 163, 390
MspR9I CCNGG 3 cut(s) 163, 390, 391
MvnI CGCG 1 cut(s) 336
MwoI GCNNNNNNNGC 3 cut(s) 86, 215, 224
NarI GGCGCC 1 cut(s) 696
NciI CCSGG 3 cut(s) 163, 390, 391
NdeII GATC 3 cut(s) 116, 133, 184
NlaIV GGNNCC 3 cut(s) 477, 697, 718
NmeAIII GCCGAG 2 cut(s) 441, 658
NmuCI GTSAC 2 cut(s) 14, 653
NsiI ATGCAT 1 cut(s) 804
NspI RCATGY 3 cut(s) 254, 548, 672
PaeI GCATGC 2 cut(s) 254, 672
PdmI GAANNNNTTC 1 cut(s) 371
PfeI GAWTC 3 cut(s) 286, 322, 775
PkrI GCNGC 1 cut(s) 197
PleI GAGTC 4 cut(s) 92, 206, 379, 595
PluTI GGCGCC 1 cut(s) 699
PpsI GAGTC 4 cut(s) 92, 206, 379, 595
Psp124BI GAGCTC 1 cut(s) 811
PspFI CCCAGC 1 cut(s) 556
PspN4I GGNNCC 3 cut(s) 477, 697, 718
RsaI GTAC 3 cut(s) 428, 536, 718
RsaNI GTAC 3 cut(s) 427, 535, 717
RseI CAYNNNNRTG 2 cut(s) 255, 711
SacI GAGCTC 1 cut(s) 811
SaqAI TTAA 4 cut(s) 563, 600, 615, 786
SatI GCNGC 1 cut(s) 196
Sau3AI GATC 3 cut(s) 116, 133, 184
ScaI AGTACT 1 cut(s) 536
SchI GAGTC 4 cut(s) 93, 206, 379, 596
ScrFI CCNGG 3 cut(s) 163, 390, 391
SduI GDGCHC 1 cut(s) 811
SfaNI GCATC 2 cut(s) 67, 148
SfoI GGCGCC 1 cut(s) 697
SmaI CCCGGG 1 cut(s) 391
SmiMI CAYNNNNRTG 2 cut(s) 255, 711
SphI GCATGC 2 cut(s) 254, 672
Sse9I AATT 4 cut(s) 294, 500, 625, 683
SsiI CCGC 2 cut(s) 19, 195
SspDI GGCGCC 1 cut(s) 695
SspMI CTAG 1 cut(s) 812
SstI GAGCTC 1 cut(s) 811
StyD4I CCNGG 3 cut(s) 161, 388, 389
TaqI TCGA 5 cut(s) 75, 183, 204, 325, 778
TasI AATT 4 cut(s) 294, 500, 625, 683
TatI WGTACW 1 cut(s) 534
TauI GCSGC 1 cut(s) 198
TfiI GAWTC 3 cut(s) 286, 322, 775
Tru1I TTAA 4 cut(s) 563, 600, 615, 786
Tru9I TTAA 4 cut(s) 563, 600, 615, 786
TscAI CASTG 3 cut(s) 523, 662, 715
TseFI GTSAC 2 cut(s) 14, 653
Tsp45I GTSAC 2 cut(s) 14, 653
TspDTI ATGAA 4 cut(s) 426, 460, 638, 712
TspGWI ACGGA 1 cut(s) 343
TspMI CCCGGG 1 cut(s) 389
TspRI CASTG 3 cut(s) 523, 662, 715
XagI CCTNNNNNAGG 1 cut(s) 836
XapI RAATTY 1 cut(s) 294
XceI RCATGY 3 cut(s) 254, 548, 672
XmaI CCCGGG 1 cut(s) 389
XmnI GAANNNNTTC 1 cut(s) 371
XspI CTAG 1 cut(s) 812
ZrmI AGTACT 1 cut(s) 536
Zsp2I ATGCAT 1 cut(s) 804
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.