MD16G1215200.v1.1

Belongs to the iron ascorbate-dependent oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
OG0000054
Physical Location & Seq
Reverse (-)
20888137 .. 20890059
1923 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1215200.v1.1.491

Sequence Viewer

Length: 951 bp
ATGGTCACCAAAACAAGAGCAGACGAGAGGGATGGAAGTGGTGCCAAACTCAGTATTCCCACCATTGATCTTCATGGCATTGATACCGACTCAGTTTTACGAGCACAAGTCGTCGAGAAAATTCGATATGCATGCGAGAAGTGGGGTTTCTTTCAGGTTACAAATGGAATTCCCGTTGATGTTTTGGACAGGATGGTACATGGAATACGTGAGTTTCATGAGAAGGATAATGATGTTAAGAAAGAGTTGTGCTCAATGGATACTGGGAACCAGGAGCAGTACCTGTCCAGTAATCGTTTCCACAAATCCAAAAGAGGAAACTGGAGGGATACGTTTGTGTGTTATCGGTCGCTTAATCCACCCAAACCCGAGGAATTACCCCCAGTGTGCAGAGAAATAGTGATTGAGTACTCAAAACAAGTGAAGGATTTGGGAATTACGTTGTTTGAGTTGCTGTCTGAGGCTCTTCGGATGAATCCCAACAAACTTAAACACATGGATTGCGCTGAGGAGTTTTCTATTTATGGTCACTACTACCCACCATGCCCTAAACAAGAATTGACTATAGGCACCGATCAACACACCGATGGCAGTTTAATCACCATACTTTTACAAGACCAAGTGGGTGGCCTCCAAGTTTTGTATGAGAATCGATGGGTTAATGTTCCTCCCATGCAAGGAGCTCTTGTTATCAATCTCGTGACAAATGACAAGTTTATCAGTGTTAATCACAGAGTTATAGCGCAGAGTGTAGGCCCAAGAGTTTCTGTGGCAAGCTTTTTCATGCCAGATGCTCGGCCAGGAAATTCAAATGTCTATGGACCAATCAAGGAGTTGTTATCAGAAGAAAATCCCCAGATATACCGAGAAGCTAATATTGAAGATTATCTTAAACACTACCTCTCGGAAAAGGTTAAAGGAAACTCCGCATTATCACAGTTCAAACTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2OG-FeII_Oxy DIOX_N

Protein Analysis

317

Amino Acids

36.0

Weight (kDa)

6.16

Isoelectric Point (pI)

31.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 19 - 123 3.9e-18 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 177 - 263 1.1e-22 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000054)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03400 AT1G03400 AT1G03410 AT1G03410 AT1G04350 AT1G06620 AT1G06620 AT1G06640 AT1G06640 AT1G06640 AT1G06645 AT1G06650 AT1G06650 AT2G25450 AT2G30830 AT2G30840 AT2G30840 AT2G30840 AT3G61400 AT3G61400 AT5G43440 AT5G43440 AT5G43450 AT5G43450 AT5G59530 AT5G59540 AT5G59540
fragaria_vesca FvH4_2g03190 FvH4_2g03220 FvH4_3g07861 FvH4_3g31880 FvH4_3g31880 FvH4_3g31880 FvH4_4g03241 FvH4_4g03250 FvH4_4g03251 FvH4_4g03260 FvH4_4g03300 FvH4_4g03301 FvH4_4g03301 FvH4_4g03301 FvH4_4g03302 FvH4_4g03303 FvH4_4g03303 FvH4_4g03304 FvH4_4g03305 FvH4_4g03323 FvH4_4g03323 FvH4_5g19290 FvH4_5g19290 FvH4_5g19290 FvH4_5g19291 FvH4_5g19291 FvH4_5g19310 FvH4_5g19310 FvH4_5g19310 FvH4_5g19320 FvH4_5g19321 FvH4_5g19321 FvH4_5g19321 FvH4_7g31470
malus_domestica MD00G1220300.v1.1 MD02G1050800.v1.1 MD02G1053200.v1.1 MD02G1053300.v1.1 MD02G1054900.v1.1 MD03G1032300.v1.1 MD03G1245000.v1.1 MD03G1245300.v1.1 MD05G1014200.v1.1 MD13G1210900.v1.1 MD13G1211000.v1.1 MD13G1211100.v1.1 MD13G1211200.v1.1 MD13G1211800.v1.1 MD13G1211900.v1.1 MD13G1212000.v1.1 MD16G1214100.v1.1 MD16G1214300.v1.1 MD16G1214400.v1.1 MD16G1214600.v1.1 MD16G1215000.v1.1 MD16G1215200.v1.1 MD16G1215300.v1.1 MD16G1215500.v1.1 MD16G1271000.v1.1
prunus_persica Prupe.1G035500_v2.0.a1 Prupe.1G035700_v2.0.a1 Prupe.1G035800_v2.0.a1 Prupe.1G035900_v2.0.a1 Prupe.1G036000_v2.0.a1 Prupe.1G036100_v2.0.a1 Prupe.1G036200_v2.0.a1 Prupe.1G036400_v2.0.a1 Prupe.1G036500_v2.0.a1 Prupe.1G036600_v2.0.a1 Prupe.1G036700_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G191000_v2.0.a1 Prupe.1G191100_v2.0.a1
pyrus_communis pycom13g18340 pycom13g18350 pycom13g18380 pycom16g17990 pycom16g18010 pycom16g18020
rosa_chinensis RchiOBHm_Chr2g0124051 RchiOBHm_Chr4g0391811 RchiOBHm_Chr4g0391931 RchiOBHm_Chr4g0391961 RchiOBHm_Chr4g0391971 RchiOBHm_Chr4g0391981 RchiOBHm_Chr4g0391991 RchiOBHm_Chr4g0392031 RchiOBHm_Chr4g0392051 RchiOBHm_Chr4g0392061 RchiOBHm_Chr4g0392071 RchiOBHm_Chr4g0392081 RchiOBHm_Chr4g0392091 RchiOBHm_Chr4g0392111 RchiOBHm_Chr4g0392121 RchiOBHm_Chr4g0392131 RchiOBHm_Chr4g0392141 RchiOBHm_Chr4g0392151 RchiOBHm_Chr4g0392211 RchiOBHm_Chr4g0392251 RchiOBHm_Chr4g0392261 RchiOBHm_Chr4g0392301 RchiOBHm_Chr4g0392311 RchiOBHm_Chr4g0392341 RchiOBHm_Chr4g0409221 RchiOBHm_Chr4g0410991 RchiOBHm_Chr4g0429131 RchiOBHm_Chr4g0437051 RchiOBHm_Chr5g0038681 RchiOBHm_Chr5g0047071 RchiOBHm_Chr5g0058651 RchiOBHm_Chr6g0248121 RchiOBHm_Chr6g0248141 RchiOBHm_Chr6g0248291 RchiOBHm_Chr6g0248341 RchiOBHm_Chr6g0248351
rosa_laevigata RLG00000006473 RLG00000006475 RLG00000006667 RLG00000007095 RLG00000009819 RLG00000009820 RLG00000009821 RLG00000009822 RLG00000009825 RLG00000009826 RLG00000009830 RLG00000009831 RLG00000009832 RLG00000009833 RLG00000009834 RLG00000009835 RLG00000009837 RLG00000009838 RLG00000009839 RLG00000009841 RLG00000009842 RLG00000009844 RLG00000009845 RLG00000009846 RLG00000009847 RLG00000009848 RLG00000009849 RLG00000015160 RLG00000015161 RLG00000017791 RLG00000018779 RLG00000034461 RLG00000035237
rosa_multiflora Rmu_co8253791.1_g000001 Rmu_co8348827.1_g000001 Rmu_co8400489.1_g000001 Rmu_sc0000383.1_g000003 Rmu_sc0000383.1_g000005 Rmu_sc0000383.1_g000026 Rmu_sc0000846.1_g000012 Rmu_sc0001231.1_g000013 Rmu_sc0001231.1_g000026 Rmu_sc0001231.1_g000028 Rmu_sc0001800.1_g000027 Rmu_sc0003436.1_g000022 Rmu_sc0004104.1_g000004 Rmu_sc0004295.1_g000021 Rmu_sc0004295.1_g000031 Rmu_sc0004928.1_g000002 Rmu_sc0004928.1_g000008 Rmu_sc0004928.1_g000011 Rmu_sc0004928.1_g000027 Rmu_sc0004977.1_g000007 Rmu_sc0005018.1_g000002 Rmu_sc0005091.1_g000026 Rmu_sc0005091.1_g000032 Rmu_sc0005091.1_g000033 Rmu_sc0005817.1_g000003 Rmu_sc0005817.1_g000008 Rmu_sc0012482.1_g000002 Rmu_sc0014210.1_g000001 Rmu_sc0016150.1_g000001 Rmu_sc0029701.1_g000002 Rmu_sc0036585.1_g000001 Rmu_sc0037489.1_g000002
rosa_roxburghii Rroxscaffold_1G00021790 Rroxscaffold_1G00021800 Rroxscaffold_1G00034360 Rroxscaffold_2G00120130 Rroxscaffold_5G00337210 Rroxscaffold_5G00337220 Rroxscaffold_5G00337230 Rroxscaffold_5G00337250 Rroxscaffold_5G00337260 Rroxscaffold_5G00337270 Rroxscaffold_5G00337300 Rroxscaffold_5G00337310 Rroxscaffold_5G00337320 Rroxscaffold_5G00337330 Rroxscaffold_5G00337350 Rroxscaffold_5G00337370 Rroxscaffold_5G00337390 Rroxscaffold_5G00337400 Rroxscaffold_5G00337420 Rroxscaffold_5G00337430 Rroxscaffold_5G00337450 Rroxscaffold_5G00337470 Rroxscaffold_5G00337480 Rroxscaffold_5G00337520 Rroxscaffold_5G00378130 Rroxscaffold_6G00397800 Rroxscaffold_7G00213320 Rroxscaffold_7G00213390 Rroxscaffold_7G00213420 Rroxscaffold_7G00213470
rosa_rugosa Rorug02G0070100 Rorug02G0070100 Rorug02G0070100 Rorug02G0128600 Rorug02G0128700 Rorug02G0128800 Rorug02G0128900 Rorug02G0248400 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337100 Rorug03G0337200 Rorug03G0337300 Rorug03G0337600 Rorug03G0337700 Rorug03G0337800 Rorug03G0337900 Rorug03G0337900 Rorug03G0338000 Rorug03G0338100 Rorug03G0338200 Rorug04G0233200.1 Rorug04G0297900 Rorug05G0233700 Rorug05G0316700 Rorug05G0530800 Rorug05G0530900
rosa_samantha Rh2AG307400 Rh2BG316500 Rh2DG331200 Rh4AG039300 Rh4AG039400 Rh4AG039600 Rh4AG039700 Rh4AG039900 Rh4AG040000 Rh4AG040100 Rh4AG040300 Rh4AG040500 Rh4AG040700 Rh4AG041000 Rh4AG041100 Rh4AG041600 Rh4AG041800 Rh4AG041900 Rh4AG352400 Rh4BG033200 Rh4BG034100 Rh4BG034300 Rh4BG034700 Rh4BG034800 Rh4BG035200 Rh4BG035400 Rh4BG036000 Rh4BG036200 Rh4BG036300 Rh4BG036500 Rh4BG036800 Rh4BG361700 Rh4CG042000 Rh4CG042200 Rh4CG042300 Rh4CG042500 Rh4CG042600 Rh4CG042800 Rh4CG043200 Rh4CG043400 Rh4CG043500 Rh4CG043700 Rh4CG043800 Rh4CG044200 Rh4CG044500 Rh4CG044700 Rh4CG177000 Rh4CG310600 Rh4CG376000 Rh4DG036300 Rh4DG036900 Rh4DG037000 Rh4DG037100 Rh4DG037200 Rh4DG037300 Rh4DG037500 Rh4DG037700 Rh4DG037800 Rh4DG037900 Rh4DG038000 Rh4DG038200 Rh4DG038500 Rh4DG038700 Rh4DG038900 Rh4DG159600 Rh5CG347900 Rh5DG409900 Rh6AG045300 Rh6AG045800 Rh6AG046000 Rh6AG046100 Rh6BG040600 Rh6BG040700 Rh6BG042200 Rh6BG042700 Rh6BG042800 Rh6DG035900 Rh6DG036100 Rh6DG036200
rosa_wichuraiana Rw0G010420 Rw2G024780 Rw4G003020 Rw4G003070 Rw4G003080 Rw4G003090 Rw4G003100 Rw4G003130 Rw4G003140 Rw4G003150 Rw4G003180 Rw4G003190 Rw4G003200 Rw4G003210 Rw4G003220 Rw4G003240 Rw4G003270 Rw4G025050 Rw4G030850 Rw6G003930 Rw6G004000 Rw6G004030 Rw6G004040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 41, 569
AciI CCGC 1 cut(s) 927
AcoI YGGCCR 1 cut(s) 797
AcsI RAATTY 3 cut(s) 120, 168, 805
AfaI GTAC 3 cut(s) 198, 281, 410
AfiI CCNNNNNNNGG 1 cut(s) 677
AgsI TTSAA 3 cut(s) 810, 881, 943
AjnI CCWGG 2 cut(s) 270, 799
AluBI AGCT 3 cut(s) 683, 777, 872
AluI AGCT 3 cut(s) 683, 777, 872
Alw21I GWGCWC 3 cut(s) 106, 254, 685
AlwNI CAGNNNCTG 1 cut(s) 283
Ama87I CYCGRG 1 cut(s) 368
AoxI GGCC 3 cut(s) 628, 754, 797
ApoI RAATTY 3 cut(s) 120, 168, 805
AspLEI GCGC 2 cut(s) 506, 745
AspS9I GGNCC 2 cut(s) 755, 821
AsuHPI GGTGA 1 cut(s) 592
AvaI CYCGRG 1 cut(s) 368
AvaII GGWCC 1 cut(s) 821
BaeI ACNNNNGTAYC 2 cut(s) 321, 354
BanI GGYRCC 2 cut(s) 41, 569
BanII GRGCYC 1 cut(s) 685
BauI CACGAG 1 cut(s) 698
Bbv12I GWGCWC 3 cut(s) 106, 254, 685
BbvCI CCTCAGC 1 cut(s) 507
BccI CCATC 4 cut(s) 26, 187, 581, 648
BcgI CGANNNNNNTGC 2 cut(s) 114, 148
BciT130I CCWGG 2 cut(s) 272, 801
BciVI GTATCC 2 cut(s) 253, 322
BfmI CTRYAG 1 cut(s) 564
BfuI GTATCC 2 cut(s) 253, 322
BmcAI AGTACT 1 cut(s) 410
Bme1390I CCNGG 2 cut(s) 272, 801
Bme18I GGWCC 1 cut(s) 821
BmeT110I CYCGRG 1 cut(s) 368
BmgT120I GGNCC 2 cut(s) 755, 821
BmiI GGNNCC 3 cut(s) 43, 269, 571
BmrFI CCNGG 2 cut(s) 272, 801
BmrI ACTGGG 2 cut(s) 273, 377
BmsI GCATC 1 cut(s) 781
BmuI ACTGGG 2 cut(s) 273, 377
BplI GAGNNNNNCTC 2 cut(s) 236, 268
BpmI CTGGAG 1 cut(s) 343
Bpu10I CCTNAGC 1 cut(s) 507
Bsa29I ATCGAT 1 cut(s) 652
BsaAI YACGTR 1 cut(s) 209
BsaJI CCNNGG 1 cut(s) 369
BsaXI ACNNNNNCTCC 2 cut(s) 672, 702
Bsc4I CCNNNNNNNGG 1 cut(s) 677
Bse1I ACTGG 4 cut(s) 268, 288, 326, 383
BseBI CCWGG 2 cut(s) 272, 801
BseCI ATCGAT 1 cut(s) 652
BseDI CCNNGG 1 cut(s) 369
BseGI GGATG 3 cut(s) 37, 198, 477
BseLI CCNNNNNNNGG 1 cut(s) 677
BseMII CTCAG 4 cut(s) 64, 105, 450, 498
BseNI ACTGG 4 cut(s) 268, 288, 326, 383
BseRI GAGGAG 1 cut(s) 524
BsgI GTGCAG 1 cut(s) 409
Bsh1285I CGRYCG 1 cut(s) 350
BshFI GGCC 3 cut(s) 630, 756, 799
BshNI GGYRCC 2 cut(s) 41, 569
BshVI ATCGAT 1 cut(s) 652
BsiEI CGRYCG 1 cut(s) 350
BsiHKAI GWGCWC 3 cut(s) 106, 254, 685
BsiHKCI CYCGRG 1 cut(s) 368
BslI CCNNNNNNNGG 1 cut(s) 677
BsnI GGCC 3 cut(s) 630, 756, 799
BsoBI CYCGRG 1 cut(s) 368
Bsp1286I GDGCHC 3 cut(s) 106, 254, 685
Bsp143I GATC 2 cut(s) 67, 574
BspACI CCGC 1 cut(s) 927
BspANI GGCC 3 cut(s) 630, 756, 799
BspCNI CTCAG 4 cut(s) 63, 104, 451, 499
BspDI ATCGAT 1 cut(s) 652
BspHI TCATGA 1 cut(s) 217
BspLI GGNNCC 3 cut(s) 43, 269, 571
BspQI GCTCTTC 1 cut(s) 471
BspT107I GGYRCC 2 cut(s) 41, 569
BsrI ACTGG 4 cut(s) 268, 288, 326, 383
BssECI CCNNGG 1 cut(s) 369
BssMI GATC 2 cut(s) 67, 574
BssSI CACGAG 1 cut(s) 698
Bst2BI CACGAG 1 cut(s) 698
Bst2UI CCWGG 2 cut(s) 272, 801
Bst4CI ACNGT 2 cut(s) 939, 948
Bst6I CTCTTC 1 cut(s) 471
BstBAI YACGTR 1 cut(s) 209
BstC8I GCNNGC 2 cut(s) 133, 775
BstDEI CTNAG 4 cut(s) 50, 91, 459, 507
BstEII GGTNACC 1 cut(s) 4
BstF5I GGATG 3 cut(s) 37, 198, 477
BstHHI GCGC 2 cut(s) 506, 745
BstKTI GATC 2 cut(s) 70, 577
BstMBI GATC 2 cut(s) 67, 574
BstMCI CGRYCG 1 cut(s) 350
BstNI CCWGG 2 cut(s) 272, 801
BstNSI RCATGY 1 cut(s) 135
BstPI GGTNACC 1 cut(s) 4
BstSCI CCNGG 2 cut(s) 270, 799
BstSFI CTRYAG 1 cut(s) 564
BstXI CCANNNNNNTGG 1 cut(s) 626
Bsu15I ATCGAT 1 cut(s) 652
BsuI GTATCC 2 cut(s) 253, 322
BsuRI GGCC 3 cut(s) 630, 756, 799
BsuTUI ATCGAT 1 cut(s) 652
BtsCI GGATG 3 cut(s) 37, 198, 477
BtsIMutI CAGTG 2 cut(s) 390, 727
Cac8I GCNNGC 2 cut(s) 133, 775
CaiI CAGNNNCTG 1 cut(s) 283
CciI TCATGA 1 cut(s) 217
CfoI GCGC 2 cut(s) 506, 745
Cfr13I GGNCC 2 cut(s) 755, 821
ClaI ATCGAT 1 cut(s) 652
Csp6I GTAC 3 cut(s) 197, 280, 409
CviAII CATG 8 cut(s) 74, 132, 200, 218, 496, 543, 673, 784
CviJI RGCY 7 cut(s) 464, 630, 683, 756, 777, 799, 872
CviKI_1 RGCY 7 cut(s) 464, 630, 683, 756, 777, 799, 872
CviQI GTAC 3 cut(s) 197, 280, 409
DdeI CTNAG 4 cut(s) 50, 91, 459, 507
DpnI GATC 2 cut(s) 69, 576
DpnII GATC 2 cut(s) 67, 574
EaeI YGGCCR 1 cut(s) 797
Eam1104I CTCTTC 1 cut(s) 471
EarI CTCTTC 1 cut(s) 471
Ecl136II GAGCTC 1 cut(s) 683
Eco24I GRGCYC 1 cut(s) 685
Eco47I GGWCC 1 cut(s) 821
Eco53kI GAGCTC 1 cut(s) 683
Eco88I CYCGRG 1 cut(s) 368
Eco91I GGTNACC 1 cut(s) 4
EcoICRI GAGCTC 1 cut(s) 683
EcoO65I GGTNACC 1 cut(s) 4
EcoRI GAATTC 1 cut(s) 168
EcoRII CCWGG 2 cut(s) 270, 799
EcoT22I ATGCAT 1 cut(s) 133
EcoT38I GRGCYC 1 cut(s) 685
FaeI CATG 8 cut(s) 77, 135, 203, 221, 499, 546, 676, 787
FalI AAGNNNNNCTT 4 cut(s) 669, 701, 873, 905
FatI CATG 8 cut(s) 73, 131, 199, 217, 495, 542, 672, 783
FokI GGATG 3 cut(s) 44, 205, 484
FriOI GRGCYC 1 cut(s) 685
GlaI GCGC 2 cut(s) 505, 744
GsuI CTGGAG 1 cut(s) 343
HaeIII GGCC 3 cut(s) 630, 756, 799
HhaI GCGC 2 cut(s) 506, 745
Hin1II CATG 8 cut(s) 77, 135, 203, 221, 499, 546, 676, 787
Hin6I GCGC 2 cut(s) 504, 743
HinP1I GCGC 2 cut(s) 504, 743
HindIII AAGCTT 1 cut(s) 775
HinfI GANTC 3 cut(s) 89, 475, 649
HphI GGTGA 1 cut(s) 592
Hpy188I TCNGA 4 cut(s) 460, 471, 844, 907
Hpy188III TCNNGA 3 cut(s) 115, 218, 700
Hpy99I CGWCG 1 cut(s) 116
HpyAV CCTTC 2 cut(s) 217, 418
HpyCH4III ACNGT 2 cut(s) 939, 948
HpyCH4IV ACGT 3 cut(s) 208, 332, 440
HpyCH4V TGCA 3 cut(s) 131, 390, 676
HpyF3I CTNAG 4 cut(s) 50, 91, 459, 507
HpySE526I ACGT 3 cut(s) 208, 332, 440
Hsp92II CATG 8 cut(s) 77, 135, 203, 221, 499, 546, 676, 787
HspAI GCGC 2 cut(s) 504, 743
Kzo9I GATC 2 cut(s) 67, 574
LguI GCTCTTC 1 cut(s) 471
LmnI GCTCC 2 cut(s) 274, 680
LweI GCATC 1 cut(s) 781
MaeII ACGT 3 cut(s) 208, 332, 440
MaeIII GTNAC 4 cut(s) 4, 157, 527, 700
MalI GATC 2 cut(s) 69, 576
MboI GATC 2 cut(s) 67, 574
MboII GAAGA 4 cut(s) 62, 458, 857, 893
MhlI GDGCHC 3 cut(s) 106, 254, 685
MluCI AATT 6 cut(s) 120, 168, 374, 435, 557, 805
MlyI GAGTC 1 cut(s) 83
MnlI CCTC 9 cut(s) 21, 308, 318, 364, 454, 502, 641, 678, 911
Mph1103I ATGCAT 1 cut(s) 133
MseI TTAA 8 cut(s) 237, 354, 489, 596, 660, 726, 891, 915
MslI CAYNNNNRTG 1 cut(s) 585
MspR9I CCNGG 2 cut(s) 272, 801
MvaI CCWGG 2 cut(s) 272, 801
NdeII GATC 2 cut(s) 67, 574
NlaIII CATG 8 cut(s) 77, 135, 203, 221, 499, 546, 676, 787
NlaIV GGNNCC 3 cut(s) 43, 269, 571
NmeAIII GCCGAG 1 cut(s) 775
NmuCI GTSAC 3 cut(s) 4, 527, 700
NsiI ATGCAT 1 cut(s) 133
NspI RCATGY 1 cut(s) 135
PaeI GCATGC 1 cut(s) 135
PagI TCATGA 1 cut(s) 217
PciSI GCTCTTC 1 cut(s) 471
PfeI GAWTC 2 cut(s) 475, 649
PleI GAGTC 1 cut(s) 83
PpsI GAGTC 1 cut(s) 83
Ppu21I YACGTR 1 cut(s) 209
Psp124BI GAGCTC 1 cut(s) 685
Psp6I CCWGG 2 cut(s) 270, 799
PspEI GGTNACC 1 cut(s) 4
PspGI CCWGG 2 cut(s) 270, 799
PspN4I GGNNCC 3 cut(s) 43, 269, 571
PspPI GGNCC 2 cut(s) 755, 821
PstNI CAGNNNCTG 1 cut(s) 283
RsaI GTAC 3 cut(s) 198, 281, 410
RsaNI GTAC 3 cut(s) 197, 280, 409
RseI CAYNNNNRTG 1 cut(s) 585
SacI GAGCTC 1 cut(s) 685
SapI GCTCTTC 1 cut(s) 471
SaqAI TTAA 8 cut(s) 237, 354, 489, 596, 660, 726, 891, 915
Sau3AI GATC 2 cut(s) 67, 574
Sau96I GGNCC 2 cut(s) 755, 821
ScaI AGTACT 1 cut(s) 410
SchI GAGTC 1 cut(s) 83
ScrFI CCNGG 2 cut(s) 272, 801
SduI GDGCHC 3 cut(s) 106, 254, 685
SfaNI GCATC 1 cut(s) 781
SfcI CTRYAG 1 cut(s) 564
SinI GGWCC 1 cut(s) 821
SmiMI CAYNNNNRTG 1 cut(s) 585
SphI GCATGC 1 cut(s) 135
Sse9I AATT 6 cut(s) 120, 168, 374, 435, 557, 805
SsiI CCGC 1 cut(s) 927
SspI AATATT 1 cut(s) 877
SstI GAGCTC 1 cut(s) 685
StyD4I CCNGG 2 cut(s) 270, 799
TaaI ACNGT 2 cut(s) 939, 948
TaiI ACGT 3 cut(s) 211, 335, 443
TaqI TCGA 3 cut(s) 114, 124, 652
TaqII GACCGA 1 cut(s) 336
TasI AATT 6 cut(s) 120, 168, 374, 435, 557, 805
TatI WGTACW 1 cut(s) 408
TfiI GAWTC 2 cut(s) 475, 649
Tru1I TTAA 8 cut(s) 237, 354, 489, 596, 660, 726, 891, 915
Tru9I TTAA 8 cut(s) 237, 354, 489, 596, 660, 726, 891, 915
TscAI CASTG 2 cut(s) 390, 727
TseFI GTSAC 3 cut(s) 4, 527, 700
Tsp45I GTSAC 3 cut(s) 4, 527, 700
TspDTI ATGAA 4 cut(s) 62, 206, 488, 772
TspRI CASTG 2 cut(s) 390, 727
VpaK11BI GGWCC 1 cut(s) 821
XapI RAATTY 3 cut(s) 120, 168, 805
XceI RCATGY 1 cut(s) 135
ZrmI AGTACT 1 cut(s) 410
Zsp2I ATGCAT 1 cut(s) 133
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.