Rroxscaffold_5G00337230

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
Physical Location & Seq
Forward (+)
5294377 .. 5296570
2194 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00337230.1

Sequence Viewer

Length: 1047 bp
ATGGCAGCTACCAATAAAAGTGATGTTTCTACCATCTATGACAGAAAAAGTGAACTGAAAGCTTTTGATGACACAAAGGAAGGTGTTAAAGGCCTTGTTGATGCTGGCATAACCGAGATACCTCGGATCTTTTATCATCCACCTGATGAGTACTCCATTCACAATACCTCTGATTCAGAAGAAGAGCAGTTCAGTATTCCAGTCATAGACCTCAAGGGCCTTTCAGATCCAACTAAACGAAAGGGGATCGTTGCAGCCGTTGCAGAAGCATCAGAGTCTTGGGGCTTTTTTCAAATTGTCAACCATGGAATATCTGTTGATGTGCTTGAGGAGATGAAGGATGGGGTACAAGGGTTTTTTCAGCAGGATACTGCTGTGAAGAAACAGTTTTACACTCGCGATAACTTCAGTAGTCCATTCGTCTACAATAGCAACTTTGATTTGTATACTGCACCAGCGACTCATTGGAGGGATTCTTTCACGTGTTACATGACTCCTACTAAGACAGAGGACCTGCCAGAAGTATGCGGGAAGTTGGGGAAGCTATTGTTTGAGTTGTTGTCTGAGGCTCTTGGGCTAAAGCAAAGTCACTTGAATGACATAGATTGTAATGAGGGGCTTTTGGTTACAGGCCATTACTATCCTGCTTGTCCACAACCAGAATTAACAGTAGGCATAAGCAAGCATGCAGATAGGACCTTCATCACTGTTCTTCTGCAAGATAATGTTGGTGGTCTTCAAGTCCTTCATCATAACATGTGGATTGATGTACCCCCTGTACCGGGTGCCCTAGTGCTTATATCAAATGACAGATTCAAGAGTGTAGAACACAGGGTGCTGGCAAACCATAGAGGTCCCAGAATCTCGGTTGCAGGTTTTTTCAGCACAGGACTGCTGCCATTGGCAAGGCTCTACGGACCAATTAAGGAGATATTATCAGAAGACAATCCTCCAAAGTACAGGGAGACCACTTTAAGGGACTATCATGCATACTACAGAGAAAAAGGCCTTGATGGGAGGTCTTCCTTGACTCATTATAAGCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

348

Amino Acids

39.09

Weight (kDa)

5.63

Isoelectric Point (pI)

40.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 66 - 168 8.6e-20 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 212 - 295 1.3e-24 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000054)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03400 AT1G03400 AT1G03410 AT1G03410 AT1G04350 AT1G06620 AT1G06620 AT1G06640 AT1G06640 AT1G06640 AT1G06645 AT1G06650 AT1G06650 AT2G25450 AT2G30830 AT2G30840 AT2G30840 AT2G30840 AT3G61400 AT3G61400 AT5G43440 AT5G43440 AT5G43450 AT5G43450 AT5G59530 AT5G59540 AT5G59540
fragaria_vesca FvH4_2g03190 FvH4_2g03220 FvH4_3g07861 FvH4_3g31880 FvH4_3g31880 FvH4_3g31880 FvH4_4g03241 FvH4_4g03250 FvH4_4g03251 FvH4_4g03260 FvH4_4g03300 FvH4_4g03301 FvH4_4g03301 FvH4_4g03301 FvH4_4g03302 FvH4_4g03303 FvH4_4g03303 FvH4_4g03304 FvH4_4g03305 FvH4_4g03323 FvH4_4g03323 FvH4_5g19290 FvH4_5g19290 FvH4_5g19290 FvH4_5g19291 FvH4_5g19291 FvH4_5g19310 FvH4_5g19310 FvH4_5g19310 FvH4_5g19320 FvH4_5g19321 FvH4_5g19321 FvH4_5g19321 FvH4_7g31470
malus_domestica MD00G1220300.v1.1 MD02G1050800.v1.1 MD02G1053200.v1.1 MD02G1053300.v1.1 MD02G1054900.v1.1 MD03G1032300.v1.1 MD03G1245000.v1.1 MD03G1245300.v1.1 MD05G1014200.v1.1 MD13G1210900.v1.1 MD13G1211000.v1.1 MD13G1211100.v1.1 MD13G1211200.v1.1 MD13G1211800.v1.1 MD13G1211900.v1.1 MD13G1212000.v1.1 MD16G1214100.v1.1 MD16G1214300.v1.1 MD16G1214400.v1.1 MD16G1214600.v1.1 MD16G1215000.v1.1 MD16G1215200.v1.1 MD16G1215300.v1.1 MD16G1215500.v1.1 MD16G1271000.v1.1
prunus_persica Prupe.1G035500_v2.0.a1 Prupe.1G035700_v2.0.a1 Prupe.1G035800_v2.0.a1 Prupe.1G035900_v2.0.a1 Prupe.1G036000_v2.0.a1 Prupe.1G036100_v2.0.a1 Prupe.1G036200_v2.0.a1 Prupe.1G036400_v2.0.a1 Prupe.1G036500_v2.0.a1 Prupe.1G036600_v2.0.a1 Prupe.1G036700_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G191000_v2.0.a1 Prupe.1G191100_v2.0.a1
pyrus_communis pycom13g18340 pycom13g18350 pycom13g18380 pycom16g17990 pycom16g18010 pycom16g18020
rosa_chinensis RchiOBHm_Chr2g0124051 RchiOBHm_Chr4g0391811 RchiOBHm_Chr4g0391931 RchiOBHm_Chr4g0391961 RchiOBHm_Chr4g0391971 RchiOBHm_Chr4g0391981 RchiOBHm_Chr4g0391991 RchiOBHm_Chr4g0392031 RchiOBHm_Chr4g0392051 RchiOBHm_Chr4g0392061 RchiOBHm_Chr4g0392071 RchiOBHm_Chr4g0392081 RchiOBHm_Chr4g0392091 RchiOBHm_Chr4g0392111 RchiOBHm_Chr4g0392121 RchiOBHm_Chr4g0392131 RchiOBHm_Chr4g0392141 RchiOBHm_Chr4g0392151 RchiOBHm_Chr4g0392211 RchiOBHm_Chr4g0392251 RchiOBHm_Chr4g0392261 RchiOBHm_Chr4g0392301 RchiOBHm_Chr4g0392311 RchiOBHm_Chr4g0392341 RchiOBHm_Chr4g0409221 RchiOBHm_Chr4g0410991 RchiOBHm_Chr4g0429131 RchiOBHm_Chr4g0437051 RchiOBHm_Chr5g0038681 RchiOBHm_Chr5g0047071 RchiOBHm_Chr5g0058651 RchiOBHm_Chr6g0248121 RchiOBHm_Chr6g0248141 RchiOBHm_Chr6g0248291 RchiOBHm_Chr6g0248341 RchiOBHm_Chr6g0248351
rosa_laevigata RLG00000006473 RLG00000006475 RLG00000006667 RLG00000007095 RLG00000009819 RLG00000009820 RLG00000009821 RLG00000009822 RLG00000009825 RLG00000009826 RLG00000009830 RLG00000009831 RLG00000009832 RLG00000009833 RLG00000009834 RLG00000009835 RLG00000009837 RLG00000009838 RLG00000009839 RLG00000009841 RLG00000009842 RLG00000009844 RLG00000009845 RLG00000009846 RLG00000009847 RLG00000009848 RLG00000009849 RLG00000015160 RLG00000015161 RLG00000017791 RLG00000018779 RLG00000034461 RLG00000035237
rosa_multiflora Rmu_co8253791.1_g000001 Rmu_co8348827.1_g000001 Rmu_co8400489.1_g000001 Rmu_sc0000383.1_g000003 Rmu_sc0000383.1_g000005 Rmu_sc0000383.1_g000026 Rmu_sc0000846.1_g000012 Rmu_sc0001231.1_g000013 Rmu_sc0001231.1_g000026 Rmu_sc0001231.1_g000028 Rmu_sc0001800.1_g000027 Rmu_sc0003436.1_g000022 Rmu_sc0004104.1_g000004 Rmu_sc0004295.1_g000021 Rmu_sc0004295.1_g000031 Rmu_sc0004928.1_g000002 Rmu_sc0004928.1_g000008 Rmu_sc0004928.1_g000011 Rmu_sc0004928.1_g000027 Rmu_sc0004977.1_g000007 Rmu_sc0005018.1_g000002 Rmu_sc0005091.1_g000026 Rmu_sc0005091.1_g000032 Rmu_sc0005091.1_g000033 Rmu_sc0005817.1_g000003 Rmu_sc0005817.1_g000008 Rmu_sc0012482.1_g000002 Rmu_sc0014210.1_g000001 Rmu_sc0016150.1_g000001 Rmu_sc0029701.1_g000002 Rmu_sc0036585.1_g000001 Rmu_sc0037489.1_g000002
rosa_roxburghii Rroxscaffold_1G00021790 Rroxscaffold_1G00021800 Rroxscaffold_1G00034360 Rroxscaffold_2G00120130 Rroxscaffold_5G00337210 Rroxscaffold_5G00337220 Rroxscaffold_5G00337230 Rroxscaffold_5G00337250 Rroxscaffold_5G00337260 Rroxscaffold_5G00337270 Rroxscaffold_5G00337300 Rroxscaffold_5G00337310 Rroxscaffold_5G00337320 Rroxscaffold_5G00337330 Rroxscaffold_5G00337350 Rroxscaffold_5G00337370 Rroxscaffold_5G00337390 Rroxscaffold_5G00337400 Rroxscaffold_5G00337420 Rroxscaffold_5G00337430 Rroxscaffold_5G00337450 Rroxscaffold_5G00337470 Rroxscaffold_5G00337480 Rroxscaffold_5G00337520 Rroxscaffold_5G00378130 Rroxscaffold_6G00397800 Rroxscaffold_7G00213320 Rroxscaffold_7G00213390 Rroxscaffold_7G00213420 Rroxscaffold_7G00213470
rosa_rugosa Rorug02G0070100 Rorug02G0070100 Rorug02G0070100 Rorug02G0128600 Rorug02G0128700 Rorug02G0128800 Rorug02G0128900 Rorug02G0248400 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337100 Rorug03G0337200 Rorug03G0337300 Rorug03G0337600 Rorug03G0337700 Rorug03G0337800 Rorug03G0337900 Rorug03G0337900 Rorug03G0338000 Rorug03G0338100 Rorug03G0338200 Rorug04G0233200.1 Rorug04G0297900 Rorug05G0233700 Rorug05G0316700 Rorug05G0530800 Rorug05G0530900
rosa_samantha Rh2AG307400 Rh2BG316500 Rh2DG331200 Rh4AG039300 Rh4AG039400 Rh4AG039600 Rh4AG039700 Rh4AG039900 Rh4AG040000 Rh4AG040100 Rh4AG040300 Rh4AG040500 Rh4AG040700 Rh4AG041000 Rh4AG041100 Rh4AG041600 Rh4AG041800 Rh4AG041900 Rh4AG352400 Rh4BG033200 Rh4BG034100 Rh4BG034300 Rh4BG034700 Rh4BG034800 Rh4BG035200 Rh4BG035400 Rh4BG036000 Rh4BG036200 Rh4BG036300 Rh4BG036500 Rh4BG036800 Rh4BG361700 Rh4CG042000 Rh4CG042200 Rh4CG042300 Rh4CG042500 Rh4CG042600 Rh4CG042800 Rh4CG043200 Rh4CG043400 Rh4CG043500 Rh4CG043700 Rh4CG043800 Rh4CG044200 Rh4CG044500 Rh4CG044700 Rh4CG177000 Rh4CG310600 Rh4CG376000 Rh4DG036300 Rh4DG036900 Rh4DG037000 Rh4DG037100 Rh4DG037200 Rh4DG037300 Rh4DG037500 Rh4DG037700 Rh4DG037800 Rh4DG037900 Rh4DG038000 Rh4DG038200 Rh4DG038500 Rh4DG038700 Rh4DG038900 Rh4DG159600 Rh5CG347900 Rh5DG409900 Rh6AG045300 Rh6AG045800 Rh6AG046000 Rh6AG046100 Rh6BG040600 Rh6BG040700 Rh6BG042200 Rh6BG042700 Rh6BG042800 Rh6DG035900 Rh6DG036100 Rh6DG036200
rosa_wichuraiana Rw0G010420 Rw2G024780 Rw4G003020 Rw4G003070 Rw4G003080 Rw4G003090 Rw4G003100 Rw4G003130 Rw4G003140 Rw4G003150 Rw4G003180 Rw4G003190 Rw4G003200 Rw4G003210 Rw4G003220 Rw4G003240 Rw4G003270 Rw4G025050 Rw4G030850 Rw6G003930 Rw6G004000 Rw6G004030 Rw6G004040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1038
Acc36I ACCTGC 2 cut(s) 522, 863
AccB1I GGYRCC 1 cut(s) 785
AccI GTMKAC 2 cut(s) 423, 446
AccII CGCG 1 cut(s) 399
AciI CCGC 1 cut(s) 528
AclWI GGATC 3 cut(s) 134, 221, 254
AcuI CTGAAG 1 cut(s) 391
AcvI CACGTG 1 cut(s) 483
AdeI CACNNNGTG 1 cut(s) 835
AfaI GTAC 5 cut(s) 152, 348, 771, 780, 959
AfiI CCNNNNNNNGG 3 cut(s) 781, 782, 975
AflIII ACRYGT 2 cut(s) 482, 756
AgsI TTSAA 4 cut(s) 293, 595, 740, 817
AluBI AGCT 4 cut(s) 8, 62, 544, 1042
AluI AGCT 4 cut(s) 8, 62, 544, 1042
Alw26I GTCTC 1 cut(s) 959
AlwI GGATC 3 cut(s) 134, 221, 254
AoxI GGCC 4 cut(s) 91, 217, 631, 1006
ApeKI GCWGC 3 cut(s) 5, 254, 895
AspS9I GGNCC 5 cut(s) 217, 511, 696, 854, 917
AsuC2I CCSGG 1 cut(s) 783
AvaII GGWCC 4 cut(s) 511, 696, 854, 917
BaeGI GKGCMC 1 cut(s) 790
BaeI ACNNNNGTAYC 4 cut(s) 338, 360, 371, 393
BanI GGYRCC 1 cut(s) 785
BbrPI CACGTG 1 cut(s) 483
BbsI GAAGAC 3 cut(s) 728, 948, 1014
BbvI GCAGC 3 cut(s) 17, 266, 882
BccI CCATC 3 cut(s) 41, 335, 1007
BceAI ACGGC 1 cut(s) 242
BciVI GTATCC 1 cut(s) 361
BcnI CCSGG 1 cut(s) 783
BcoDI GTCTC 1 cut(s) 959
BfaI CTAG 1 cut(s) 791
BfmI CTRYAG 1 cut(s) 994
BfuAI ACCTGC 2 cut(s) 522, 863
BfuI GTATCC 1 cut(s) 361
BisI GCNGC 3 cut(s) 6, 255, 896
BlsI GCNGC 3 cut(s) 7, 256, 897
BmcAI AGTACT 1 cut(s) 152
Bme1390I CCNGG 1 cut(s) 783
Bme18I GGWCC 4 cut(s) 511, 696, 854, 917
BmgT120I GGNCC 5 cut(s) 217, 511, 696, 854, 917
BmiI GGNNCC 2 cut(s) 787, 856
BmrFI CCNGG 1 cut(s) 783
BmsI GCATC 2 cut(s) 91, 278
BpiI GAAGAC 3 cut(s) 728, 948, 1014
BpuEI CTTGAG 2 cut(s) 197, 347
BpuMI CCSGG 1 cut(s) 783
BsaAI YACGTR 1 cut(s) 483
BsaI GGTCTC 1 cut(s) 959
BsaJI CCNNGG 2 cut(s) 122, 304
Bsc4I CCNNNNNNNGG 3 cut(s) 781, 782, 975
Bse1I ACTGG 1 cut(s) 200
BseDI CCNNGG 2 cut(s) 122, 304
BseGI GGATG 2 cut(s) 136, 346
BseLI CCNNNNNNNGG 3 cut(s) 781, 782, 975
BseMII CTCAG 1 cut(s) 555
BseNI ACTGG 1 cut(s) 200
BseRI GAGGAG 1 cut(s) 344
BseSI GKGCMC 1 cut(s) 790
BseXI GCAGC 3 cut(s) 17, 266, 882
BsgI GTGCAG 1 cut(s) 435
Bsh1236I CGCG 1 cut(s) 399
BshFI GGCC 4 cut(s) 93, 219, 633, 1008
BshNI GGYRCC 1 cut(s) 785
BsiSI CCGG 1 cut(s) 782
BslFI GGGAC 2 cut(s) 840, 992
BslI CCNNNNNNNGG 3 cut(s) 781, 782, 975
BsmAI GTCTC 1 cut(s) 959
BsmFI GGGAC 2 cut(s) 840, 992
BsnI GGCC 4 cut(s) 93, 219, 633, 1008
Bso31I GGTCTC 1 cut(s) 959
Bsp1286I GDGCHC 1 cut(s) 790
Bsp143I GATC 3 cut(s) 126, 226, 246
Bsp19I CCATGG 1 cut(s) 304
Bsp68I TCGCGA 1 cut(s) 399
BspACI CCGC 1 cut(s) 528
BspANI GGCC 4 cut(s) 93, 219, 633, 1008
BspCNI CTCAG 1 cut(s) 556
BspFNI CGCG 1 cut(s) 399
BspLI GGNNCC 2 cut(s) 787, 856
BspMI ACCTGC 2 cut(s) 522, 863
BspPI GGATC 3 cut(s) 134, 221, 254
BspQI GCTCTTC 1 cut(s) 177
BspT107I GGYRCC 1 cut(s) 785
BspTNI GGTCTC 1 cut(s) 959
BsrI ACTGG 1 cut(s) 200
BssECI CCNNGG 2 cut(s) 122, 304
BssMI GATC 3 cut(s) 126, 226, 246
BssNAI GTATAC 1 cut(s) 447
BssT1I CCWWGG 1 cut(s) 304
Bst1107I GTATAC 1 cut(s) 447
Bst4CI ACNGT 3 cut(s) 387, 670, 709
Bst6I CTCTTC 1 cut(s) 177
BstAPI GCANNNNNTGC 1 cut(s) 260
BstBAI YACGTR 1 cut(s) 483
BstC8I GCNNGC 4 cut(s) 106, 683, 687, 840
BstDEI CTNAG 2 cut(s) 501, 564
BstDSI CCRYGG 1 cut(s) 304
BstF5I GGATG 2 cut(s) 136, 346
BstFNI CGCG 1 cut(s) 399
BstKTI GATC 3 cut(s) 129, 229, 249
BstMAI GTCTC 1 cut(s) 959
BstMBI GATC 3 cut(s) 126, 226, 246
BstMWI GCNNNNNNNGC 1 cut(s) 260
BstNSI RCATGY 2 cut(s) 689, 760
BstSCI CCNGG 1 cut(s) 781
BstSFI CTRYAG 1 cut(s) 994
BstSLI GKGCMC 1 cut(s) 790
BstUI CGCG 1 cut(s) 399
BstV1I GCAGC 3 cut(s) 17, 266, 882
BstV2I GAAGAC 3 cut(s) 728, 948, 1014
BstX2I RGATCY 2 cut(s) 126, 226
BstYI RGATCY 2 cut(s) 126, 226
BstZ17I GTATAC 1 cut(s) 447
BsuI GTATCC 1 cut(s) 361
BsuRI GGCC 4 cut(s) 93, 219, 633, 1008
BtgI CCRYGG 1 cut(s) 304
BtsCI GGATG 2 cut(s) 136, 346
BtsIMutI CAGTG 1 cut(s) 705
BtuMI TCGCGA 1 cut(s) 399
BveI ACCTGC 2 cut(s) 522, 863
Cac8I GCNNGC 4 cut(s) 106, 683, 687, 840
Cfr13I GGNCC 5 cut(s) 217, 511, 696, 854, 917
Csp6I GTAC 5 cut(s) 151, 347, 770, 779, 958
CviAII CATG 5 cut(s) 305, 490, 686, 757, 986
CviQI GTAC 5 cut(s) 151, 347, 770, 779, 958
DdeI CTNAG 2 cut(s) 501, 564
DpnI GATC 3 cut(s) 128, 228, 248
DpnII GATC 3 cut(s) 126, 226, 246
DraIII CACNNNGTG 1 cut(s) 835
Eam1104I CTCTTC 1 cut(s) 177
EarI CTCTTC 1 cut(s) 177
Eco130I CCWWGG 1 cut(s) 304
Eco147I AGGCCT 2 cut(s) 93, 1008
Eco31I GGTCTC 1 cut(s) 959
Eco47I GGWCC 4 cut(s) 511, 696, 854, 917
Eco57I CTGAAG 1 cut(s) 391
Eco72I CACGTG 1 cut(s) 483
EcoO109I RGGNCCY 4 cut(s) 217, 511, 696, 854
EcoT14I CCWWGG 1 cut(s) 304
EcoT22I ATGCAT 1 cut(s) 991
ErhI CCWWGG 1 cut(s) 304
FaeI CATG 5 cut(s) 308, 493, 689, 760, 989
FaqI GGGAC 2 cut(s) 840, 992
FatI CATG 5 cut(s) 304, 489, 685, 756, 985
FauI CCCGC 1 cut(s) 521
FblI GTMKAC 2 cut(s) 423, 446
Fnu4HI GCNGC 3 cut(s) 6, 255, 896
FokI GGATG 2 cut(s) 123, 353
Fsp4HI GCNGC 3 cut(s) 6, 255, 896
FspBI CTAG 1 cut(s) 791
GluI GCNGC 3 cut(s) 6, 255, 896
HaeIII GGCC 4 cut(s) 93, 219, 633, 1008
HapII CCGG 1 cut(s) 782
Hin1II CATG 5 cut(s) 308, 493, 689, 760, 989
HincII GTYRAC 1 cut(s) 301
HindII GTYRAC 1 cut(s) 301
HindIII AAGCTT 2 cut(s) 60, 1040
HinfI GANTC 8 cut(s) 173, 275, 460, 473, 493, 813, 861, 1030
HpaII CCGG 1 cut(s) 782
Hpy166II GTNNAC 5 cut(s) 53, 301, 424, 447, 653
Hpy188I TCNGA 7 cut(s) 126, 172, 178, 226, 274, 565, 940
Hpy188III TCNNGA 2 cut(s) 398, 817
Hpy8I GTNNAC 5 cut(s) 53, 301, 424, 447, 653
HpyAV CCTTC 4 cut(s) 74, 331, 709, 755
HpyCH4III ACNGT 3 cut(s) 387, 670, 709
HpyCH4IV ACGT 1 cut(s) 482
HpyCH4V TGCA 7 cut(s) 254, 263, 452, 689, 718, 872, 989
HpyF10VI GCNNNNNNNGC 1 cut(s) 260
HpyF3I CTNAG 2 cut(s) 501, 564
HpySE526I ACGT 1 cut(s) 482
Hsp92II CATG 5 cut(s) 308, 493, 689, 760, 989
Kzo9I GATC 3 cut(s) 126, 226, 246
LguI GCTCTTC 1 cut(s) 177
Lsp1109I GCAGC 3 cut(s) 17, 266, 882
LweI GCATC 2 cut(s) 91, 278
MaeI CTAG 1 cut(s) 791
MaeII ACGT 1 cut(s) 482
MaeIII GTNAC 3 cut(s) 485, 587, 625
MalI GATC 3 cut(s) 128, 228, 248
MboI GATC 3 cut(s) 126, 226, 246
MboII GAAGA 7 cut(s) 191, 194, 391, 704, 728, 953, 1014
MflI RGATCY 2 cut(s) 126, 226
MhlI GDGCHC 1 cut(s) 790
MluCI AATT 3 cut(s) 294, 662, 921
MlyI GAGTC 4 cut(s) 284, 454, 487, 1024
MmeI TCCRAC 1 cut(s) 254
Mph1103I ATGCAT 1 cut(s) 991
MseI TTAA 4 cut(s) 87, 665, 924, 974
MslI CAYNNNNRTG 1 cut(s) 594
MspI CCGG 1 cut(s) 782
MspR9I CCNGG 1 cut(s) 783
MvnI CGCG 1 cut(s) 399
MwoI GCNNNNNNNGC 1 cut(s) 260
NciI CCSGG 1 cut(s) 783
NcoI CCATGG 1 cut(s) 304
NdeII GATC 3 cut(s) 126, 226, 246
NlaIII CATG 5 cut(s) 308, 493, 689, 760, 989
NlaIV GGNNCC 2 cut(s) 787, 856
NmuCI GTSAC 1 cut(s) 587
NruI TCGCGA 1 cut(s) 399
NsiI ATGCAT 1 cut(s) 991
NspI RCATGY 2 cut(s) 689, 760
PaeI GCATGC 1 cut(s) 689
PceI AGGCCT 2 cut(s) 93, 1008
PciI ACATGT 1 cut(s) 756
PciSI GCTCTTC 1 cut(s) 177
PcsI WCGNNNNNNNCGW 1 cut(s) 255
PfeI GAWTC 4 cut(s) 173, 473, 813, 861
PkrI GCNGC 3 cut(s) 7, 256, 897
PleI GAGTC 4 cut(s) 283, 454, 487, 1024
PmaCI CACGTG 1 cut(s) 483
PmlI CACGTG 1 cut(s) 483
PpsI GAGTC 4 cut(s) 283, 454, 487, 1024
Ppu21I YACGTR 1 cut(s) 483
PpuMI RGGWCCY 3 cut(s) 511, 696, 854
PscI ACATGT 1 cut(s) 756
PsiI TTATAA 1 cut(s) 1038
Psp5II RGGWCCY 3 cut(s) 511, 696, 854
PspCI CACGTG 1 cut(s) 483
PspN4I GGNNCC 2 cut(s) 787, 856
PspPI GGNCC 5 cut(s) 217, 511, 696, 854, 917
PspPPI RGGWCCY 3 cut(s) 511, 696, 854
PsuI RGATCY 2 cut(s) 126, 226
RruI TCGCGA 1 cut(s) 399
RsaI GTAC 5 cut(s) 152, 348, 771, 780, 959
RsaNI GTAC 5 cut(s) 151, 347, 770, 779, 958
RseI CAYNNNNRTG 1 cut(s) 594
SapI GCTCTTC 1 cut(s) 177
SaqAI TTAA 4 cut(s) 87, 665, 924, 974
SatI GCNGC 3 cut(s) 6, 255, 896
Sau3AI GATC 3 cut(s) 126, 226, 246
Sau96I GGNCC 5 cut(s) 217, 511, 696, 854, 917
ScaI AGTACT 1 cut(s) 152
SchI GAGTC 4 cut(s) 284, 454, 487, 1024
ScrFI CCNGG 1 cut(s) 783
SduI GDGCHC 1 cut(s) 790
SfaNI GCATC 2 cut(s) 91, 278
SfcI CTRYAG 1 cut(s) 994
SinI GGWCC 4 cut(s) 511, 696, 854, 917
SmiMI CAYNNNNRTG 1 cut(s) 594
SmlI CTYRAG 2 cut(s) 212, 326
SmoI CTYRAG 2 cut(s) 212, 326
SphI GCATGC 1 cut(s) 689
Sse9I AATT 3 cut(s) 294, 662, 921
SseBI AGGCCT 2 cut(s) 93, 1008
SsiI CCGC 1 cut(s) 528
SspMI CTAG 1 cut(s) 791
StuI AGGCCT 2 cut(s) 93, 1008
StyD4I CCNGG 1 cut(s) 781
StyI CCWWGG 1 cut(s) 304
TaaI ACNGT 3 cut(s) 387, 670, 709
TaiI ACGT 1 cut(s) 485
TasI AATT 3 cut(s) 294, 662, 921
TatI WGTACW 2 cut(s) 150, 957
TfiI GAWTC 4 cut(s) 173, 473, 813, 861
Tru1I TTAA 4 cut(s) 87, 665, 924, 974
Tru9I TTAA 4 cut(s) 87, 665, 924, 974
TscAI CASTG 1 cut(s) 712
TseFI GTSAC 1 cut(s) 587
TseI GCWGC 3 cut(s) 5, 254, 895
Tsp45I GTSAC 1 cut(s) 587
TspDTI ATGAA 3 cut(s) 350, 691, 737
TspGWI ACGGA 1 cut(s) 930
TspRI CASTG 1 cut(s) 712
VpaK11BI GGWCC 4 cut(s) 511, 696, 854, 917
XceI RCATGY 2 cut(s) 689, 760
XcmI CCANNNNNNNNNTGG 1 cut(s) 462
XmiI GTMKAC 2 cut(s) 423, 446
XspI CTAG 1 cut(s) 791
ZrmI AGTACT 1 cut(s) 152
Zsp2I ATGCAT 1 cut(s) 991
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.