Rh4BG036800

Belongs to the iron ascorbate-dependent oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
OG0000054
Physical Location & Seq
Forward (+)
6608298 .. 6610720
2423 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG036800.1

Sequence Viewer

Length: 1101 bp
ATGGTCTCCGACAATTCAAGCAACCAAGACCGTCTCCAACAGCTCAAGGCCTTTGACGAATCCAAAGCTGGTGTCAAAGGGATCGTTGATGCGGGCATCACCAAAATCCCACCAATTTTTGTCCGGCCTCCGGCAGATTACGCCTGCGAAGATCAAGTTTCCGGCAAGACAACCAAAACCCATTTCAGTATTCCGGTGGTAGACCTCGCTGACACTGCCGGCAGGCGACCGGAGGTGATCGACGGAGTGCGGCGGGCGGCGGAGAGCGTAGGGTTCTTCCAGGTGGTGAACCATGGGATACCCAAGAGAGTGTTGGAGGGGATGTTGGAGGCAGCGCGTGGGTTCCACGAGCTGCCGAGGGAAGCGAAGGCTGAGTACTATAGTAGGGAGCTGATGAGGAAAGTCAAGTTTGGGAGCAACTTTGATTTGTATCAGTCGAGATTTGTTAATTGGAGGGACACCTTGTTTTGTGTCATGGGTCCTGAGCCTCTTGATCCTCAAGAGTTGCCTCTGGTTTGCAGAGACATTACCATGGAGTATTCAGATCAAGTTCACAAACTAGGTGTGACGTTGTTTGAGTTGCTATCTGAGGCACTTGGGCTCAAACCGGACCACCTTTTAGAATTGGATTGTGCAAAGGGGCATCTTATTCTTAGTCACTACTATCCACCATGCCCTGAGCCTGAACTGACTTTGGGCACAACCAAACACTCTGATCCGGATTTTCTCACCATTCTACTTCAAGACCATATTGGTGGCCTCCAAGTTCTGTGTCAAAACCAATGGATTGATGTTCCTCCTGTTCCTGGAGCTTTAGTGGTCAACATTGGAGATCTCTTGCAGCTTATATCCAATGACAGATTCAAAAGCGTAGAGCATCAAGTGCTTGCCAACCTCGAAGGACCAAGAGTATCTATTGCTTGCTTTTTCACCTTGCATGTTTATCCATCAACAAGGTTGTATGGCCCCATAAACGAATTGCTGTCAGAAAATCGCCCCCCTGTATACAAAGAAACCTCACTTCAAGACTTCATTGCTTACTCTTATGGAAAAGGGCTTGATGGGAACTCTGCACTAACACATTTCAAGTGCCAAAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2OG-FeII_Oxy DIOX_N

Protein Analysis

366

Amino Acids

40.97

Weight (kDa)

5.66

Isoelectric Point (pI)

35.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 64 - 160 5.2e-18 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 215 - 310 6.3e-34 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000054)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03400 AT1G03400 AT1G03410 AT1G03410 AT1G04350 AT1G06620 AT1G06620 AT1G06640 AT1G06640 AT1G06640 AT1G06645 AT1G06650 AT1G06650 AT2G25450 AT2G30830 AT2G30840 AT2G30840 AT2G30840 AT3G61400 AT3G61400 AT5G43440 AT5G43440 AT5G43450 AT5G43450 AT5G59530 AT5G59540 AT5G59540
fragaria_vesca FvH4_2g03190 FvH4_2g03220 FvH4_3g07861 FvH4_3g31880 FvH4_3g31880 FvH4_3g31880 FvH4_4g03241 FvH4_4g03250 FvH4_4g03251 FvH4_4g03260 FvH4_4g03300 FvH4_4g03301 FvH4_4g03301 FvH4_4g03301 FvH4_4g03302 FvH4_4g03303 FvH4_4g03303 FvH4_4g03304 FvH4_4g03305 FvH4_4g03323 FvH4_4g03323 FvH4_5g19290 FvH4_5g19290 FvH4_5g19290 FvH4_5g19291 FvH4_5g19291 FvH4_5g19310 FvH4_5g19310 FvH4_5g19310 FvH4_5g19320 FvH4_5g19321 FvH4_5g19321 FvH4_5g19321 FvH4_7g31470
malus_domestica MD00G1220300.v1.1 MD02G1050800.v1.1 MD02G1053200.v1.1 MD02G1053300.v1.1 MD02G1054900.v1.1 MD03G1032300.v1.1 MD03G1245000.v1.1 MD03G1245300.v1.1 MD05G1014200.v1.1 MD13G1210900.v1.1 MD13G1211000.v1.1 MD13G1211100.v1.1 MD13G1211200.v1.1 MD13G1211800.v1.1 MD13G1211900.v1.1 MD13G1212000.v1.1 MD16G1214100.v1.1 MD16G1214300.v1.1 MD16G1214400.v1.1 MD16G1214600.v1.1 MD16G1215000.v1.1 MD16G1215200.v1.1 MD16G1215300.v1.1 MD16G1215500.v1.1 MD16G1271000.v1.1
prunus_persica Prupe.1G035500_v2.0.a1 Prupe.1G035700_v2.0.a1 Prupe.1G035800_v2.0.a1 Prupe.1G035900_v2.0.a1 Prupe.1G036000_v2.0.a1 Prupe.1G036100_v2.0.a1 Prupe.1G036200_v2.0.a1 Prupe.1G036400_v2.0.a1 Prupe.1G036500_v2.0.a1 Prupe.1G036600_v2.0.a1 Prupe.1G036700_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G191000_v2.0.a1 Prupe.1G191100_v2.0.a1
pyrus_communis pycom13g18340 pycom13g18350 pycom13g18380 pycom16g17990 pycom16g18010 pycom16g18020
rosa_chinensis RchiOBHm_Chr2g0124051 RchiOBHm_Chr4g0391811 RchiOBHm_Chr4g0391931 RchiOBHm_Chr4g0391961 RchiOBHm_Chr4g0391971 RchiOBHm_Chr4g0391981 RchiOBHm_Chr4g0391991 RchiOBHm_Chr4g0392031 RchiOBHm_Chr4g0392051 RchiOBHm_Chr4g0392061 RchiOBHm_Chr4g0392071 RchiOBHm_Chr4g0392081 RchiOBHm_Chr4g0392091 RchiOBHm_Chr4g0392111 RchiOBHm_Chr4g0392121 RchiOBHm_Chr4g0392131 RchiOBHm_Chr4g0392141 RchiOBHm_Chr4g0392151 RchiOBHm_Chr4g0392211 RchiOBHm_Chr4g0392251 RchiOBHm_Chr4g0392261 RchiOBHm_Chr4g0392301 RchiOBHm_Chr4g0392311 RchiOBHm_Chr4g0392341 RchiOBHm_Chr4g0409221 RchiOBHm_Chr4g0410991 RchiOBHm_Chr4g0429131 RchiOBHm_Chr4g0437051 RchiOBHm_Chr5g0038681 RchiOBHm_Chr5g0047071 RchiOBHm_Chr5g0058651 RchiOBHm_Chr6g0248121 RchiOBHm_Chr6g0248141 RchiOBHm_Chr6g0248291 RchiOBHm_Chr6g0248341 RchiOBHm_Chr6g0248351
rosa_laevigata RLG00000006473 RLG00000006475 RLG00000006667 RLG00000007095 RLG00000009819 RLG00000009820 RLG00000009821 RLG00000009822 RLG00000009825 RLG00000009826 RLG00000009830 RLG00000009831 RLG00000009832 RLG00000009833 RLG00000009834 RLG00000009835 RLG00000009837 RLG00000009838 RLG00000009839 RLG00000009841 RLG00000009842 RLG00000009844 RLG00000009845 RLG00000009846 RLG00000009847 RLG00000009848 RLG00000009849 RLG00000015160 RLG00000015161 RLG00000017791 RLG00000018779 RLG00000034461 RLG00000035237
rosa_multiflora Rmu_co8253791.1_g000001 Rmu_co8348827.1_g000001 Rmu_co8400489.1_g000001 Rmu_sc0000383.1_g000003 Rmu_sc0000383.1_g000005 Rmu_sc0000383.1_g000026 Rmu_sc0000846.1_g000012 Rmu_sc0001231.1_g000013 Rmu_sc0001231.1_g000026 Rmu_sc0001231.1_g000028 Rmu_sc0001800.1_g000027 Rmu_sc0003436.1_g000022 Rmu_sc0004104.1_g000004 Rmu_sc0004295.1_g000021 Rmu_sc0004295.1_g000031 Rmu_sc0004928.1_g000002 Rmu_sc0004928.1_g000008 Rmu_sc0004928.1_g000011 Rmu_sc0004928.1_g000027 Rmu_sc0004977.1_g000007 Rmu_sc0005018.1_g000002 Rmu_sc0005091.1_g000026 Rmu_sc0005091.1_g000032 Rmu_sc0005091.1_g000033 Rmu_sc0005817.1_g000003 Rmu_sc0005817.1_g000008 Rmu_sc0012482.1_g000002 Rmu_sc0014210.1_g000001 Rmu_sc0016150.1_g000001 Rmu_sc0029701.1_g000002 Rmu_sc0036585.1_g000001 Rmu_sc0037489.1_g000002
rosa_roxburghii Rroxscaffold_1G00021790 Rroxscaffold_1G00021800 Rroxscaffold_1G00034360 Rroxscaffold_2G00120130 Rroxscaffold_5G00337210 Rroxscaffold_5G00337220 Rroxscaffold_5G00337230 Rroxscaffold_5G00337250 Rroxscaffold_5G00337260 Rroxscaffold_5G00337270 Rroxscaffold_5G00337300 Rroxscaffold_5G00337310 Rroxscaffold_5G00337320 Rroxscaffold_5G00337330 Rroxscaffold_5G00337350 Rroxscaffold_5G00337370 Rroxscaffold_5G00337390 Rroxscaffold_5G00337400 Rroxscaffold_5G00337420 Rroxscaffold_5G00337430 Rroxscaffold_5G00337450 Rroxscaffold_5G00337470 Rroxscaffold_5G00337480 Rroxscaffold_5G00337520 Rroxscaffold_5G00378130 Rroxscaffold_6G00397800 Rroxscaffold_7G00213320 Rroxscaffold_7G00213390 Rroxscaffold_7G00213420 Rroxscaffold_7G00213470
rosa_rugosa Rorug02G0070100 Rorug02G0070100 Rorug02G0070100 Rorug02G0128600 Rorug02G0128700 Rorug02G0128800 Rorug02G0128900 Rorug02G0248400 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337100 Rorug03G0337200 Rorug03G0337300 Rorug03G0337600 Rorug03G0337700 Rorug03G0337800 Rorug03G0337900 Rorug03G0337900 Rorug03G0338000 Rorug03G0338100 Rorug03G0338200 Rorug04G0233200.1 Rorug04G0297900 Rorug05G0233700 Rorug05G0316700 Rorug05G0530800 Rorug05G0530900
rosa_samantha Rh2AG307400 Rh2BG316500 Rh2DG331200 Rh4AG039300 Rh4AG039400 Rh4AG039600 Rh4AG039700 Rh4AG039900 Rh4AG040000 Rh4AG040100 Rh4AG040300 Rh4AG040500 Rh4AG040700 Rh4AG041000 Rh4AG041100 Rh4AG041600 Rh4AG041800 Rh4AG041900 Rh4AG352400 Rh4BG033200 Rh4BG034100 Rh4BG034300 Rh4BG034700 Rh4BG034800 Rh4BG035200 Rh4BG035400 Rh4BG036000 Rh4BG036200 Rh4BG036300 Rh4BG036500 Rh4BG036800 Rh4BG361700 Rh4CG042000 Rh4CG042200 Rh4CG042300 Rh4CG042500 Rh4CG042600 Rh4CG042800 Rh4CG043200 Rh4CG043400 Rh4CG043500 Rh4CG043700 Rh4CG043800 Rh4CG044200 Rh4CG044500 Rh4CG044700 Rh4CG177000 Rh4CG310600 Rh4CG376000 Rh4DG036300 Rh4DG036900 Rh4DG037000 Rh4DG037100 Rh4DG037200 Rh4DG037300 Rh4DG037500 Rh4DG037700 Rh4DG037800 Rh4DG037900 Rh4DG038000 Rh4DG038200 Rh4DG038500 Rh4DG038700 Rh4DG038900 Rh4DG159600 Rh5CG347900 Rh5DG409900 Rh6AG045300 Rh6AG045800 Rh6AG046000 Rh6AG046100 Rh6BG040600 Rh6BG040700 Rh6BG042200 Rh6BG042700 Rh6BG042800 Rh6DG035900 Rh6DG036100 Rh6DG036200
rosa_wichuraiana Rw0G010420 Rw2G024780 Rw4G003020 Rw4G003070 Rw4G003080 Rw4G003090 Rw4G003100 Rw4G003130 Rw4G003140 Rw4G003150 Rw4G003180 Rw4G003190 Rw4G003200 Rw4G003210 Rw4G003220 Rw4G003240 Rw4G003270 Rw4G025050 Rw4G030850 Rw6G003930 Rw6G004000 Rw6G004030 Rw6G004040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 201, 1005
AccII CGCG 1 cut(s) 337
AccIII TCCGGA 1 cut(s) 718
AciI CCGC 5 cut(s) 92, 250, 253, 257, 260
AclWI GGATC 3 cut(s) 89, 488, 710
AfaI GTAC 1 cut(s) 377
AfiI CCNNNNNNNGG 2 cut(s) 130, 806
AgsI TTSAA 5 cut(s) 18, 743, 865, 1025, 1087
AjnI CCWGG 2 cut(s) 279, 805
AjuI GAANNNNNNNTTGG 4 cut(s) 167, 199, 845, 877
AluBI AGCT 6 cut(s) 43, 68, 352, 391, 812, 844
AluI AGCT 6 cut(s) 43, 68, 352, 391, 812, 844
Alw26I GTCTC 3 cut(s) 10, 38, 516
AlwI GGATC 3 cut(s) 89, 488, 710
Aor13HI TCCGGA 1 cut(s) 718
AoxI GGCC 4 cut(s) 48, 125, 757, 964
ApeKI GCWGC 3 cut(s) 332, 352, 841
ArsI GACNNNNNNTTYG 2 cut(s) 57, 89
AspLEI GCGC 1 cut(s) 337
AspS9I GGNCC 4 cut(s) 479, 610, 902, 965
AsuHPI GGTGA 5 cut(s) 91, 247, 298, 721, 922
AvaII GGWCC 3 cut(s) 479, 610, 902
BaeGI GKGCMC 1 cut(s) 701
BanII GRGCYC 1 cut(s) 603
BarI GAAGNNNNNNTAC 2 cut(s) 359, 391
BauI CACGAG 1 cut(s) 347
BbvI GCAGC 3 cut(s) 339, 344, 853
BccI CCATC 2 cut(s) 955, 1055
BciT130I CCWGG 2 cut(s) 281, 807
BciVI GTATCC 1 cut(s) 291
BcoDI GTCTC 3 cut(s) 10, 38, 516
BfaI CTAG 1 cut(s) 560
BfmI CTRYAG 1 cut(s) 379
BfuI GTATCC 1 cut(s) 291
BglII AGATCT 1 cut(s) 832
BisI GCNGC 5 cut(s) 251, 258, 333, 353, 842
BlsI GCNGC 5 cut(s) 252, 259, 334, 354, 843
BmcAI AGTACT 1 cut(s) 377
Bme1390I CCNGG 2 cut(s) 281, 807
Bme18I GGWCC 3 cut(s) 479, 610, 902
BmgT120I GGNCC 4 cut(s) 479, 610, 902, 965
BmiI GGNNCC 3 cut(s) 344, 480, 967
BmrFI CCNGG 2 cut(s) 281, 807
BmsI GCATC 4 cut(s) 79, 105, 652, 886
BpmI CTGGAG 1 cut(s) 828
Bpu10I CCTNAGC 2 cut(s) 483, 678
BpuEI CTTGAG 2 cut(s) 29, 483
BsaBI GATNNNNATC 1 cut(s) 429
BsaI GGTCTC 1 cut(s) 10
BsaJI CCNNGG 3 cut(s) 292, 356, 531
BsaWI WCCGGW 4 cut(s) 193, 229, 607, 718
BsaXI ACNNNNNCTCC 4 cut(s) 308, 338, 801, 831
Bsc4I CCNNNNNNNGG 2 cut(s) 130, 806
Bse118I RCCGGY 1 cut(s) 218
Bse3DI GCAATG 1 cut(s) 1032
Bse8I GATNNNNATC 1 cut(s) 429
BseAI TCCGGA 1 cut(s) 718
BseBI CCWGG 2 cut(s) 281, 807
BseDI CCNNGG 3 cut(s) 292, 356, 531
BseGI GGATG 1 cut(s) 327
BseJI GATNNNNATC 1 cut(s) 429
BseLI CCNNNNNNNGG 2 cut(s) 130, 806
BseMI GCAATG 1 cut(s) 1032
BseMII CTCAG 4 cut(s) 363, 474, 579, 669
BseSI GKGCMC 1 cut(s) 701
BseXI GCAGC 3 cut(s) 339, 344, 853
BsgI GTGCAG 1 cut(s) 1056
Bsh1236I CGCG 1 cut(s) 337
Bsh1285I CGRYCG 1 cut(s) 230
BshFI GGCC 4 cut(s) 50, 127, 759, 966
BsiEI CGRYCG 1 cut(s) 230
BsiSI CCGG 8 cut(s) 124, 131, 162, 194, 219, 230, 608, 719
BslFI GGGAC 1 cut(s) 470
BslI CCNNNNNNNGG 2 cut(s) 130, 806
BsmAI GTCTC 3 cut(s) 10, 38, 516
BsmBI CGTCTC 1 cut(s) 38
BsmFI GGGAC 1 cut(s) 470
BsnI GGCC 4 cut(s) 50, 127, 759, 966
Bso31I GGTCTC 1 cut(s) 10
Bsp1286I GDGCHC 2 cut(s) 603, 701
Bsp13I TCCGGA 1 cut(s) 718
Bsp143I GATC 7 cut(s) 81, 151, 237, 493, 544, 715, 832
Bsp19I CCATGG 2 cut(s) 292, 531
BspACI CCGC 5 cut(s) 92, 250, 253, 257, 260
BspANI GGCC 4 cut(s) 50, 127, 759, 966
BspCNI CTCAG 4 cut(s) 364, 475, 580, 670
BspEI TCCGGA 1 cut(s) 718
BspFNI CGCG 1 cut(s) 337
BspLI GGNNCC 3 cut(s) 344, 480, 967
BspPI GGATC 3 cut(s) 89, 488, 710
BspTNI GGTCTC 1 cut(s) 10
BsrDI GCAATG 1 cut(s) 1032
BsrFI RCCGGY 1 cut(s) 218
BssAI RCCGGY 1 cut(s) 218
BssECI CCNNGG 3 cut(s) 292, 356, 531
BssMI GATC 7 cut(s) 81, 151, 237, 493, 544, 715, 832
BssNAI GTATAC 1 cut(s) 1006
BssSI CACGAG 1 cut(s) 347
BssT1I CCWWGG 2 cut(s) 292, 531
Bst1107I GTATAC 1 cut(s) 1006
Bst2BI CACGAG 1 cut(s) 347
Bst2UI CCWGG 2 cut(s) 281, 807
Bst4CI ACNGT 1 cut(s) 32
BstAPI GCANNNNNTGC 1 cut(s) 883
BstC8I GCNNGC 7 cut(s) 94, 145, 220, 224, 255, 888, 922
BstDEI CTNAG 5 cut(s) 372, 483, 588, 653, 678
BstDSI CCRYGG 2 cut(s) 292, 531
BstF5I GGATG 1 cut(s) 327
BstFNI CGCG 1 cut(s) 337
BstHHI GCGC 1 cut(s) 337
BstKTI GATC 7 cut(s) 84, 154, 240, 496, 547, 718, 835
BstMAI GTCTC 3 cut(s) 10, 38, 516
BstMBI GATC 7 cut(s) 81, 151, 237, 493, 544, 715, 832
BstMCI CGRYCG 1 cut(s) 230
BstMWI GCNNNNNNNGC 3 cut(s) 140, 215, 883
BstNI CCWGG 2 cut(s) 281, 807
BstNSI RCATGY 1 cut(s) 941
BstSCI CCNGG 2 cut(s) 279, 805
BstSFI CTRYAG 1 cut(s) 379
BstSLI GKGCMC 1 cut(s) 701
BstUI CGCG 1 cut(s) 337
BstV1I GCAGC 3 cut(s) 339, 344, 853
BstX2I RGATCY 1 cut(s) 832
BstXI CCANNNNNNTGG 1 cut(s) 755
BstYI RGATCY 1 cut(s) 832
BstZ17I GTATAC 1 cut(s) 1006
BsuI GTATCC 1 cut(s) 291
BsuRI GGCC 4 cut(s) 50, 127, 759, 966
BtgI CCRYGG 2 cut(s) 292, 531
BtsCI GGATG 1 cut(s) 327
BtsI GCAGTG 1 cut(s) 213
BtsIMutI CAGTG 1 cut(s) 213
Cac8I GCNNGC 7 cut(s) 94, 145, 220, 224, 255, 888, 922
CfoI GCGC 1 cut(s) 337
Cfr10I RCCGGY 1 cut(s) 218
Cfr13I GGNCC 4 cut(s) 479, 610, 902, 965
Csp6I GTAC 1 cut(s) 376
CviAII CATG 5 cut(s) 293, 475, 532, 672, 938
CviQI GTAC 1 cut(s) 376
DdeI CTNAG 5 cut(s) 372, 483, 588, 653, 678
DpnI GATC 7 cut(s) 83, 153, 239, 495, 546, 717, 834
DpnII GATC 7 cut(s) 81, 151, 237, 493, 544, 715, 832
EciI GGCGGA 1 cut(s) 275
Eco130I CCWWGG 2 cut(s) 292, 531
Eco147I AGGCCT 1 cut(s) 50
Eco24I GRGCYC 1 cut(s) 603
Eco31I GGTCTC 1 cut(s) 10
Eco47I GGWCC 3 cut(s) 479, 610, 902
EcoO109I RGGNCCY 1 cut(s) 479
EcoRII CCWGG 2 cut(s) 279, 805
EcoT14I CCWWGG 2 cut(s) 292, 531
EcoT38I GRGCYC 1 cut(s) 603
ErhI CCWWGG 2 cut(s) 292, 531
Esp3I CGTCTC 1 cut(s) 38
FaeI CATG 5 cut(s) 296, 478, 535, 675, 941
FaqI GGGAC 1 cut(s) 470
FatI CATG 5 cut(s) 292, 474, 531, 671, 937
FauI CCCGC 2 cut(s) 85, 246
FblI GTMKAC 2 cut(s) 201, 1005
Fnu4HI GCNGC 5 cut(s) 251, 258, 333, 353, 842
FokI GGATG 1 cut(s) 334
FriOI GRGCYC 1 cut(s) 603
Fsp4HI GCNGC 5 cut(s) 251, 258, 333, 353, 842
FspBI CTAG 1 cut(s) 560
GlaI GCGC 1 cut(s) 336
GluI GCNGC 5 cut(s) 251, 258, 333, 353, 842
GsuI CTGGAG 1 cut(s) 828
HaeIII GGCC 4 cut(s) 50, 127, 759, 966
HapII CCGG 8 cut(s) 124, 131, 162, 194, 219, 230, 608, 719
HhaI GCGC 1 cut(s) 337
Hin1II CATG 5 cut(s) 296, 478, 535, 675, 941
Hin6I GCGC 1 cut(s) 335
HinP1I GCGC 1 cut(s) 335
HincII GTYRAC 1 cut(s) 823
HindII GTYRAC 1 cut(s) 823
HinfI GANTC 2 cut(s) 59, 861
HpaII CCGG 8 cut(s) 124, 131, 162, 194, 219, 230, 608, 719
HphI GGTGA 5 cut(s) 91, 247, 298, 721, 922
Hpy166II GTNNAC 5 cut(s) 202, 289, 553, 823, 1006
Hpy188I TCNGA 5 cut(s) 10, 544, 589, 715, 988
Hpy188III TCNNGA 7 cut(s) 438, 482, 491, 500, 719, 743, 1025
Hpy8I GTNNAC 5 cut(s) 202, 289, 553, 823, 1006
Hpy99I CGWCG 1 cut(s) 245
HpyAV CCTTC 2 cut(s) 361, 893
HpyCH4III ACNGT 1 cut(s) 32
HpyCH4IV ACGT 1 cut(s) 569
HpyCH4V TGCA 5 cut(s) 519, 635, 841, 937, 1073
HpyF10VI GCNNNNNNNGC 3 cut(s) 140, 215, 883
HpyF3I CTNAG 5 cut(s) 372, 483, 588, 653, 678
HpySE526I ACGT 1 cut(s) 569
Hsp92II CATG 5 cut(s) 296, 478, 535, 675, 941
HspAI GCGC 1 cut(s) 335
Kpn2I TCCGGA 1 cut(s) 718
KroI GCCGGC 1 cut(s) 218
KroNI GCCGGC 1 cut(s) 220
Kzo9I GATC 7 cut(s) 81, 151, 237, 493, 544, 715, 832
LmnI GCTCC 3 cut(s) 388, 414, 809
Lsp1109I GCAGC 3 cut(s) 339, 344, 853
LweI GCATC 4 cut(s) 79, 105, 652, 886
MaeI CTAG 1 cut(s) 560
MaeII ACGT 1 cut(s) 569
MaeIII GTNAC 2 cut(s) 565, 656
MalI GATC 7 cut(s) 83, 153, 239, 495, 546, 717, 834
MboI GATC 7 cut(s) 81, 151, 237, 493, 544, 715, 832
MboII GAAGA 2 cut(s) 161, 268
MflI RGATCY 1 cut(s) 832
MhlI GDGCHC 2 cut(s) 603, 701
MluCI AATT 5 cut(s) 13, 114, 448, 623, 977
MmeI TCCRAC 4 cut(s) 33, 61, 294, 306
MroI TCCGGA 1 cut(s) 718
MroNI GCCGGC 1 cut(s) 218
MseI TTAA 1 cut(s) 447
MslI CAYNNNNRTG 2 cut(s) 530, 753
MspI CCGG 8 cut(s) 124, 131, 162, 194, 219, 230, 608, 719
MspR9I CCNGG 2 cut(s) 281, 807
MvaI CCWGG 2 cut(s) 281, 807
MvnI CGCG 1 cut(s) 337
MwoI GCNNNNNNNGC 3 cut(s) 140, 215, 883
NaeI GCCGGC 1 cut(s) 220
NcoI CCATGG 2 cut(s) 292, 531
NdeII GATC 7 cut(s) 81, 151, 237, 493, 544, 715, 832
NgoMIV GCCGGC 1 cut(s) 218
NlaIII CATG 5 cut(s) 296, 478, 535, 675, 941
NlaIV GGNNCC 3 cut(s) 344, 480, 967
NmeAIII GCCGAG 1 cut(s) 381
NmuCI GTSAC 2 cut(s) 565, 656
NspI RCATGY 1 cut(s) 941
PceI AGGCCT 1 cut(s) 50
PdiI GCCGGC 1 cut(s) 220
PfeI GAWTC 2 cut(s) 59, 861
PfoI TCCNGGA 1 cut(s) 805
PkrI GCNGC 5 cut(s) 252, 259, 334, 354, 843
PpuMI RGGWCCY 1 cut(s) 479
Psp5II RGGWCCY 1 cut(s) 479
Psp6I CCWGG 2 cut(s) 279, 805
PspGI CCWGG 2 cut(s) 279, 805
PspN4I GGNNCC 3 cut(s) 344, 480, 967
PspPI GGNCC 4 cut(s) 479, 610, 902, 965
PspPPI RGGWCCY 1 cut(s) 479
PsuI RGATCY 1 cut(s) 832
RsaI GTAC 1 cut(s) 377
RsaNI GTAC 1 cut(s) 376
RseI CAYNNNNRTG 2 cut(s) 530, 753
SaqAI TTAA 1 cut(s) 447
SatI GCNGC 5 cut(s) 251, 258, 333, 353, 842
Sau3AI GATC 7 cut(s) 81, 151, 237, 493, 544, 715, 832
Sau96I GGNCC 4 cut(s) 479, 610, 902, 965
ScaI AGTACT 1 cut(s) 377
ScrFI CCNGG 2 cut(s) 281, 807
SduI GDGCHC 2 cut(s) 603, 701
SfaNI GCATC 4 cut(s) 79, 105, 652, 886
SfcI CTRYAG 1 cut(s) 379
SinI GGWCC 3 cut(s) 479, 610, 902
SmiMI CAYNNNNRTG 2 cut(s) 530, 753
SmlI CTYRAG 2 cut(s) 44, 498
SmoI CTYRAG 2 cut(s) 44, 498
Sse9I AATT 5 cut(s) 13, 114, 448, 623, 977
SseBI AGGCCT 1 cut(s) 50
SsiI CCGC 5 cut(s) 92, 250, 253, 257, 260
SspMI CTAG 1 cut(s) 560
StuI AGGCCT 1 cut(s) 50
StyD4I CCNGG 2 cut(s) 279, 805
StyI CCWWGG 2 cut(s) 292, 531
TaaI ACNGT 1 cut(s) 32
TaiI ACGT 1 cut(s) 572
TaqI TCGA 3 cut(s) 240, 437, 897
TasI AATT 5 cut(s) 13, 114, 448, 623, 977
TatI WGTACW 1 cut(s) 375
TauI GCSGC 2 cut(s) 253, 260
TfiI GAWTC 2 cut(s) 59, 861
Tru1I TTAA 1 cut(s) 447
Tru9I TTAA 1 cut(s) 447
TscAI CASTG 1 cut(s) 220
TseFI GTSAC 2 cut(s) 565, 656
TseI GCWGC 3 cut(s) 332, 352, 841
Tsp45I GTSAC 2 cut(s) 565, 656
TspDTI ATGAA 1 cut(s) 1021
TspGWI ACGGA 1 cut(s) 258
TspRI CASTG 1 cut(s) 220
VpaK11BI GGWCC 3 cut(s) 479, 610, 902
XceI RCATGY 1 cut(s) 941
XcmI CCANNNNNNNNNTGG 1 cut(s) 310
XmiI GTMKAC 2 cut(s) 201, 1005
XspI CTAG 1 cut(s) 560
ZrmI AGTACT 1 cut(s) 377
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.