Rh4CG042500

Belongs to the iron ascorbate-dependent oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
OG0000054
Physical Location & Seq
Forward (+)
8625937 .. 8628884
2948 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG042500.1

Sequence Viewer

Length: 1095 bp
ATGCTGCCATCTACAAAGCTTTACGGATTGATCAAGCAATTATTGTCAGAATACAATCCTCCAAAGTACAAGGAGACTACTGTGAGGGACTACTTTGTGCACAGCAGCCAGAAAGGCCTCGATGTCAATGATGAGTACTCCATCCATGATTTCAGTGATCCAGAAGAAACCCAATATAGCATTCCAGTCATTGATCTTGAAGGCCTTTCCGATTCAATTAAACAAAAGGAGATTGTTGCAAAAGTTGGAGAGGCATCAGAGACCTGGGGCTTCTTTCAGATAGTCAACCATGGAATACCTGTTGATGTTCTTGAAGAGATAAAAAATGGGGTCCGTCGGTTTTTTGAGCAGGACTCTGAGGTGAAGAAACAGCTTTATGGTCGCGATCACTTCAGGAATCCTGTGCTCTATAATAGCAACTTTGATCTGTATAGTGCACCGGCAACTAATTGGAGAGATACTTTTTCGTGTTACATGGCTCCAACTCCTACTAAGCGAGAAGACTTGCCAGACGTATGCAGAGACATACTTGTTGAGTACTCGAACCAAGTAATGAAGTTGGGGAAGCTATTGTTCGACTTGTTGTCTGAAGCTCTTGGATTGAAGCCGAGTCACTTGAATGACATAGATTGTACTGAGGGGCATCTGTTAGCAGGCCATTACTATCCCCCTTGTCCACAGCCAGAACTAACTCTAGGCGCAACCAAACATGCTGATAATGCCTTTCTTACTGTTCTTCTGCAAGACCATATTGGTGGTCTTCAAGTCCTTCACCAGAACAAGTGGTTTGATGTACCCCCCGTGCACGGTGCTCTTGTGGTTAATATTGGAGATCTTCTGCAGCTTATATCTAATGACAGATTCAAGAGTGTAGAACACAGGGTGCTGGCAAACCTTAGAGGTCCACGAGTATCGGTTGCAAGCTTTTTTTGCACAGGATTGCTGCCATTAACAAAACTCTATGGACCCATCAAGGAGTTGCTATCAGAAGACAATCCTCCGAAGTACAGGGAGACTACTGTTAGGGACTATTTTGCCTACTTCAATCAAAAAGGCCTCGATGGTACCTCTGCCTTGTCACATTTTGAGCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2OG-FeII_Oxy DIOX_N

Protein Analysis

364

Amino Acids

41.34

Weight (kDa)

5.46

Isoelectric Point (pI)

37.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 61 - 164 5.3e-21 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 215 - 311 3.8e-33 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000054)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03400 AT1G03400 AT1G03410 AT1G03410 AT1G04350 AT1G06620 AT1G06620 AT1G06640 AT1G06640 AT1G06640 AT1G06645 AT1G06650 AT1G06650 AT2G25450 AT2G30830 AT2G30840 AT2G30840 AT2G30840 AT3G61400 AT3G61400 AT5G43440 AT5G43440 AT5G43450 AT5G43450 AT5G59530 AT5G59540 AT5G59540
fragaria_vesca FvH4_2g03190 FvH4_2g03220 FvH4_3g07861 FvH4_3g31880 FvH4_3g31880 FvH4_3g31880 FvH4_4g03241 FvH4_4g03250 FvH4_4g03251 FvH4_4g03260 FvH4_4g03300 FvH4_4g03301 FvH4_4g03301 FvH4_4g03301 FvH4_4g03302 FvH4_4g03303 FvH4_4g03303 FvH4_4g03304 FvH4_4g03305 FvH4_4g03323 FvH4_4g03323 FvH4_5g19290 FvH4_5g19290 FvH4_5g19290 FvH4_5g19291 FvH4_5g19291 FvH4_5g19310 FvH4_5g19310 FvH4_5g19310 FvH4_5g19320 FvH4_5g19321 FvH4_5g19321 FvH4_5g19321 FvH4_7g31470
malus_domestica MD00G1220300.v1.1 MD02G1050800.v1.1 MD02G1053200.v1.1 MD02G1053300.v1.1 MD02G1054900.v1.1 MD03G1032300.v1.1 MD03G1245000.v1.1 MD03G1245300.v1.1 MD05G1014200.v1.1 MD13G1210900.v1.1 MD13G1211000.v1.1 MD13G1211100.v1.1 MD13G1211200.v1.1 MD13G1211800.v1.1 MD13G1211900.v1.1 MD13G1212000.v1.1 MD16G1214100.v1.1 MD16G1214300.v1.1 MD16G1214400.v1.1 MD16G1214600.v1.1 MD16G1215000.v1.1 MD16G1215200.v1.1 MD16G1215300.v1.1 MD16G1215500.v1.1 MD16G1271000.v1.1
prunus_persica Prupe.1G035500_v2.0.a1 Prupe.1G035700_v2.0.a1 Prupe.1G035800_v2.0.a1 Prupe.1G035900_v2.0.a1 Prupe.1G036000_v2.0.a1 Prupe.1G036100_v2.0.a1 Prupe.1G036200_v2.0.a1 Prupe.1G036400_v2.0.a1 Prupe.1G036500_v2.0.a1 Prupe.1G036600_v2.0.a1 Prupe.1G036700_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G191000_v2.0.a1 Prupe.1G191100_v2.0.a1
pyrus_communis pycom13g18340 pycom13g18350 pycom13g18380 pycom16g17990 pycom16g18010 pycom16g18020
rosa_chinensis RchiOBHm_Chr2g0124051 RchiOBHm_Chr4g0391811 RchiOBHm_Chr4g0391931 RchiOBHm_Chr4g0391961 RchiOBHm_Chr4g0391971 RchiOBHm_Chr4g0391981 RchiOBHm_Chr4g0391991 RchiOBHm_Chr4g0392031 RchiOBHm_Chr4g0392051 RchiOBHm_Chr4g0392061 RchiOBHm_Chr4g0392071 RchiOBHm_Chr4g0392081 RchiOBHm_Chr4g0392091 RchiOBHm_Chr4g0392111 RchiOBHm_Chr4g0392121 RchiOBHm_Chr4g0392131 RchiOBHm_Chr4g0392141 RchiOBHm_Chr4g0392151 RchiOBHm_Chr4g0392211 RchiOBHm_Chr4g0392251 RchiOBHm_Chr4g0392261 RchiOBHm_Chr4g0392301 RchiOBHm_Chr4g0392311 RchiOBHm_Chr4g0392341 RchiOBHm_Chr4g0409221 RchiOBHm_Chr4g0410991 RchiOBHm_Chr4g0429131 RchiOBHm_Chr4g0437051 RchiOBHm_Chr5g0038681 RchiOBHm_Chr5g0047071 RchiOBHm_Chr5g0058651 RchiOBHm_Chr6g0248121 RchiOBHm_Chr6g0248141 RchiOBHm_Chr6g0248291 RchiOBHm_Chr6g0248341 RchiOBHm_Chr6g0248351
rosa_laevigata RLG00000006473 RLG00000006475 RLG00000006667 RLG00000007095 RLG00000009819 RLG00000009820 RLG00000009821 RLG00000009822 RLG00000009825 RLG00000009826 RLG00000009830 RLG00000009831 RLG00000009832 RLG00000009833 RLG00000009834 RLG00000009835 RLG00000009837 RLG00000009838 RLG00000009839 RLG00000009841 RLG00000009842 RLG00000009844 RLG00000009845 RLG00000009846 RLG00000009847 RLG00000009848 RLG00000009849 RLG00000015160 RLG00000015161 RLG00000017791 RLG00000018779 RLG00000034461 RLG00000035237
rosa_multiflora Rmu_co8253791.1_g000001 Rmu_co8348827.1_g000001 Rmu_co8400489.1_g000001 Rmu_sc0000383.1_g000003 Rmu_sc0000383.1_g000005 Rmu_sc0000383.1_g000026 Rmu_sc0000846.1_g000012 Rmu_sc0001231.1_g000013 Rmu_sc0001231.1_g000026 Rmu_sc0001231.1_g000028 Rmu_sc0001800.1_g000027 Rmu_sc0003436.1_g000022 Rmu_sc0004104.1_g000004 Rmu_sc0004295.1_g000021 Rmu_sc0004295.1_g000031 Rmu_sc0004928.1_g000002 Rmu_sc0004928.1_g000008 Rmu_sc0004928.1_g000011 Rmu_sc0004928.1_g000027 Rmu_sc0004977.1_g000007 Rmu_sc0005018.1_g000002 Rmu_sc0005091.1_g000026 Rmu_sc0005091.1_g000032 Rmu_sc0005091.1_g000033 Rmu_sc0005817.1_g000003 Rmu_sc0005817.1_g000008 Rmu_sc0012482.1_g000002 Rmu_sc0014210.1_g000001 Rmu_sc0016150.1_g000001 Rmu_sc0029701.1_g000002 Rmu_sc0036585.1_g000001 Rmu_sc0037489.1_g000002
rosa_roxburghii Rroxscaffold_1G00021790 Rroxscaffold_1G00021800 Rroxscaffold_1G00034360 Rroxscaffold_2G00120130 Rroxscaffold_5G00337210 Rroxscaffold_5G00337220 Rroxscaffold_5G00337230 Rroxscaffold_5G00337250 Rroxscaffold_5G00337260 Rroxscaffold_5G00337270 Rroxscaffold_5G00337300 Rroxscaffold_5G00337310 Rroxscaffold_5G00337320 Rroxscaffold_5G00337330 Rroxscaffold_5G00337350 Rroxscaffold_5G00337370 Rroxscaffold_5G00337390 Rroxscaffold_5G00337400 Rroxscaffold_5G00337420 Rroxscaffold_5G00337430 Rroxscaffold_5G00337450 Rroxscaffold_5G00337470 Rroxscaffold_5G00337480 Rroxscaffold_5G00337520 Rroxscaffold_5G00378130 Rroxscaffold_6G00397800 Rroxscaffold_7G00213320 Rroxscaffold_7G00213390 Rroxscaffold_7G00213420 Rroxscaffold_7G00213470
rosa_rugosa Rorug02G0070100 Rorug02G0070100 Rorug02G0070100 Rorug02G0128600 Rorug02G0128700 Rorug02G0128800 Rorug02G0128900 Rorug02G0248400 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337100 Rorug03G0337200 Rorug03G0337300 Rorug03G0337600 Rorug03G0337700 Rorug03G0337800 Rorug03G0337900 Rorug03G0337900 Rorug03G0338000 Rorug03G0338100 Rorug03G0338200 Rorug04G0233200.1 Rorug04G0297900 Rorug05G0233700 Rorug05G0316700 Rorug05G0530800 Rorug05G0530900
rosa_samantha Rh2AG307400 Rh2BG316500 Rh2DG331200 Rh4AG039300 Rh4AG039400 Rh4AG039600 Rh4AG039700 Rh4AG039900 Rh4AG040000 Rh4AG040100 Rh4AG040300 Rh4AG040500 Rh4AG040700 Rh4AG041000 Rh4AG041100 Rh4AG041600 Rh4AG041800 Rh4AG041900 Rh4AG352400 Rh4BG033200 Rh4BG034100 Rh4BG034300 Rh4BG034700 Rh4BG034800 Rh4BG035200 Rh4BG035400 Rh4BG036000 Rh4BG036200 Rh4BG036300 Rh4BG036500 Rh4BG036800 Rh4BG361700 Rh4CG042000 Rh4CG042200 Rh4CG042300 Rh4CG042500 Rh4CG042600 Rh4CG042800 Rh4CG043200 Rh4CG043400 Rh4CG043500 Rh4CG043700 Rh4CG043800 Rh4CG044200 Rh4CG044500 Rh4CG044700 Rh4CG177000 Rh4CG310600 Rh4CG376000 Rh4DG036300 Rh4DG036900 Rh4DG037000 Rh4DG037100 Rh4DG037200 Rh4DG037300 Rh4DG037500 Rh4DG037700 Rh4DG037800 Rh4DG037900 Rh4DG038000 Rh4DG038200 Rh4DG038500 Rh4DG038700 Rh4DG038900 Rh4DG159600 Rh5CG347900 Rh5DG409900 Rh6AG045300 Rh6AG045800 Rh6AG046000 Rh6AG046100 Rh6BG040600 Rh6BG040700 Rh6BG042200 Rh6BG042700 Rh6BG042800 Rh6DG035900 Rh6DG036100 Rh6DG036200
rosa_wichuraiana Rw0G010420 Rw2G024780 Rw4G003020 Rw4G003070 Rw4G003080 Rw4G003090 Rw4G003100 Rw4G003130 Rw4G003140 Rw4G003150 Rw4G003180 Rw4G003190 Rw4G003200 Rw4G003210 Rw4G003220 Rw4G003240 Rw4G003270 Rw4G025050 Rw4G030850 Rw6G003930 Rw6G004000 Rw6G004030 Rw6G004040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1064
AccB1I GGYRCC 1 cut(s) 1064
AccII CGCG 1 cut(s) 384
AclWI GGATC 1 cut(s) 152
AcuI CTGAAG 2 cut(s) 376, 609
AdeI CACNNNGTG 1 cut(s) 883
AfaI GTAC 7 cut(s) 68, 137, 539, 634, 795, 1007, 1066
AfiI CCNNNNNNNGG 1 cut(s) 806
AgsI TTSAA 8 cut(s) 200, 216, 314, 604, 619, 764, 865, 1045
AhdI GACNNNNNGTC 1 cut(s) 583
AjnI CCWGG 1 cut(s) 263
AjuI GAANNNNNNNTTGG 2 cut(s) 165, 197
AluBI AGCT 7 cut(s) 19, 373, 568, 593, 844, 924, 1090
AluI AGCT 7 cut(s) 19, 373, 568, 593, 844, 924, 1090
Alw21I GWGCWC 5 cut(s) 102, 408, 439, 807, 814
Alw26I GTCTC 4 cut(s) 68, 254, 516, 1007
Alw44I GTGCAC 3 cut(s) 98, 435, 803
AlwI GGATC 1 cut(s) 152
AoxI GGCC 4 cut(s) 115, 202, 655, 1054
ApaLI GTGCAC 3 cut(s) 98, 435, 803
ApeKI GCWGC 4 cut(s) 4, 105, 841, 943
Asp718I GGTACC 1 cut(s) 1064
AspLEI GCGC 1 cut(s) 701
AspS9I GGNCC 3 cut(s) 331, 902, 965
AsuHPI GGTGA 2 cut(s) 373, 764
AvaII GGWCC 3 cut(s) 331, 902, 965
BaeGI GKGCMC 3 cut(s) 102, 439, 807
BanI GGYRCC 1 cut(s) 1064
BauI CACGAG 1 cut(s) 906
BbsI GAAGAC 3 cut(s) 507, 752, 996
Bbv12I GWGCWC 5 cut(s) 102, 408, 439, 807, 814
BbvI GCAGC 3 cut(s) 117, 853, 930
BccI CCATC 4 cut(s) 16, 149, 977, 1055
BciT130I CCWGG 1 cut(s) 265
BclI TGATCA 1 cut(s) 30
BcoDI GTCTC 4 cut(s) 68, 254, 516, 1007
BfaI CTAG 1 cut(s) 695
BfmI CTRYAG 1 cut(s) 839
BglI GCCNNNNNGGC 1 cut(s) 114
BglII AGATCT 1 cut(s) 832
BisI GCNGC 4 cut(s) 5, 106, 842, 944
BlsI GCNGC 4 cut(s) 6, 107, 843, 945
BmcAI AGTACT 2 cut(s) 137, 539
Bme1390I CCNGG 1 cut(s) 265
Bme18I GGWCC 3 cut(s) 331, 902, 965
BmeRI GACNNNNNGTC 1 cut(s) 583
BmgT120I GGNCC 3 cut(s) 331, 902, 965
BmiI GGNNCC 4 cut(s) 332, 480, 967, 1066
BmrFI CCNGG 1 cut(s) 265
BmsI GCATC 2 cut(s) 263, 652
BpiI GAAGAC 3 cut(s) 507, 752, 996
BplI GAGNNNNNCTC 2 cut(s) 338, 370
BsaI GGTCTC 1 cut(s) 254
BsaJI CCNNGG 2 cut(s) 264, 289
Bsc4I CCNNNNNNNGG 1 cut(s) 806
Bse118I RCCGGY 1 cut(s) 439
Bse1I ACTGG 1 cut(s) 185
BseBI CCWGG 1 cut(s) 265
BseDI CCNNGG 2 cut(s) 264, 289
BseGI GGATG 1 cut(s) 141
BseLI CCNNNNNNNGG 1 cut(s) 806
BseMII CTCAG 2 cut(s) 348, 627
BseNI ACTGG 1 cut(s) 185
BseSI GKGCMC 3 cut(s) 102, 439, 807
BseXI GCAGC 3 cut(s) 117, 853, 930
Bsh1236I CGCG 1 cut(s) 384
BshFI GGCC 4 cut(s) 117, 204, 657, 1056
BshNI GGYRCC 1 cut(s) 1064
BsiHKAI GWGCWC 5 cut(s) 102, 408, 439, 807, 814
BsiSI CCGG 1 cut(s) 440
BslFI GGGAC 2 cut(s) 101, 1040
BslI CCNNNNNNNGG 1 cut(s) 806
BsmAI GTCTC 4 cut(s) 68, 254, 516, 1007
BsmFI GGGAC 2 cut(s) 101, 1040
BsmI GAATGC 1 cut(s) 180
BsnI GGCC 4 cut(s) 117, 204, 657, 1056
Bso31I GGTCTC 1 cut(s) 254
Bsp1286I GDGCHC 5 cut(s) 102, 408, 439, 807, 814
Bsp143I GATC 6 cut(s) 30, 157, 193, 385, 424, 832
Bsp19I CCATGG 1 cut(s) 289
Bsp68I TCGCGA 1 cut(s) 384
BspANI GGCC 4 cut(s) 117, 204, 657, 1056
BspCNI CTCAG 2 cut(s) 349, 628
BspFNI CGCG 1 cut(s) 384
BspLI GGNNCC 4 cut(s) 332, 480, 967, 1066
BspMAI CTGCAG 1 cut(s) 843
BspPI GGATC 1 cut(s) 152
BspT107I GGYRCC 1 cut(s) 1064
BspTNI GGTCTC 1 cut(s) 254
BsrFI RCCGGY 1 cut(s) 439
BsrI ACTGG 1 cut(s) 185
BssAI RCCGGY 1 cut(s) 439
BssECI CCNNGG 2 cut(s) 264, 289
BssMI GATC 6 cut(s) 30, 157, 193, 385, 424, 832
BssSI CACGAG 1 cut(s) 906
BssT1I CCWWGG 1 cut(s) 289
Bst2BI CACGAG 1 cut(s) 906
Bst2UI CCWGG 1 cut(s) 265
Bst4CI ACNGT 4 cut(s) 82, 733, 809, 1021
Bst6I CTCTTC 1 cut(s) 309
BstC8I GCNNGC 3 cut(s) 655, 888, 922
BstDEI CTNAG 4 cut(s) 357, 492, 636, 896
BstDSI CCRYGG 1 cut(s) 289
BstF5I GGATG 1 cut(s) 141
BstFNI CGCG 1 cut(s) 384
BstHHI GCGC 1 cut(s) 701
BstKTI GATC 6 cut(s) 33, 160, 196, 388, 427, 835
BstMAI GTCTC 4 cut(s) 68, 254, 516, 1007
BstMBI GATC 6 cut(s) 30, 157, 193, 385, 424, 832
BstMWI GCNNNNNNNGC 3 cut(s) 114, 719, 930
BstNI CCWGG 1 cut(s) 265
BstNSI RCATGY 1 cut(s) 713
BstSCI CCNGG 1 cut(s) 263
BstSFI CTRYAG 1 cut(s) 839
BstSLI GKGCMC 3 cut(s) 102, 439, 807
BstUI CGCG 1 cut(s) 384
BstV1I GCAGC 3 cut(s) 117, 853, 930
BstV2I GAAGAC 3 cut(s) 507, 752, 996
BstX2I RGATCY 1 cut(s) 832
BstXI CCANNNNNNTGG 1 cut(s) 755
BstYI RGATCY 1 cut(s) 832
BsuRI GGCC 4 cut(s) 117, 204, 657, 1056
BtgI CCRYGG 1 cut(s) 289
BtsCI GGATG 1 cut(s) 141
BtsIMutI CAGTG 1 cut(s) 160
BtuMI TCGCGA 1 cut(s) 384
Cac8I GCNNGC 3 cut(s) 655, 888, 922
CfoI GCGC 1 cut(s) 701
Cfr10I RCCGGY 1 cut(s) 439
Cfr13I GGNCC 3 cut(s) 331, 902, 965
Csp6I GTAC 7 cut(s) 67, 136, 538, 633, 794, 1006, 1065
CviAII CATG 4 cut(s) 146, 290, 475, 710
CviQI GTAC 7 cut(s) 67, 136, 538, 633, 794, 1006, 1065
DdeI CTNAG 4 cut(s) 357, 492, 636, 896
DpnI GATC 6 cut(s) 32, 159, 195, 387, 426, 834
DpnII GATC 6 cut(s) 30, 157, 193, 385, 424, 832
DraIII CACNNNGTG 1 cut(s) 883
DriI GACNNNNNGTC 1 cut(s) 583
Eam1104I CTCTTC 1 cut(s) 309
Eam1105I GACNNNNNGTC 1 cut(s) 583
EarI CTCTTC 1 cut(s) 309
Eco130I CCWWGG 1 cut(s) 289
Eco147I AGGCCT 3 cut(s) 117, 204, 1056
Eco31I GGTCTC 1 cut(s) 254
Eco47I GGWCC 3 cut(s) 331, 902, 965
Eco57I CTGAAG 2 cut(s) 376, 609
EcoRII CCWGG 1 cut(s) 263
EcoT14I CCWWGG 1 cut(s) 289
ErhI CCWWGG 1 cut(s) 289
FaeI CATG 4 cut(s) 149, 293, 478, 713
FaqI GGGAC 2 cut(s) 101, 1040
FatI CATG 4 cut(s) 145, 289, 474, 709
FbaI TGATCA 1 cut(s) 30
Fnu4HI GCNGC 4 cut(s) 5, 106, 842, 944
FokI GGATG 1 cut(s) 128
Fsp4HI GCNGC 4 cut(s) 5, 106, 842, 944
FspBI CTAG 1 cut(s) 695
GlaI GCGC 1 cut(s) 700
GluI GCNGC 4 cut(s) 5, 106, 842, 944
HaeIII GGCC 4 cut(s) 117, 204, 657, 1056
HapII CCGG 1 cut(s) 440
HhaI GCGC 1 cut(s) 701
Hin1II CATG 4 cut(s) 149, 293, 478, 713
Hin6I GCGC 1 cut(s) 699
HinP1I GCGC 1 cut(s) 699
HincII GTYRAC 1 cut(s) 286
HindII GTYRAC 1 cut(s) 286
HindIII AAGCTT 2 cut(s) 17, 922
HinfI GANTC 5 cut(s) 212, 353, 397, 610, 861
HpaII CCGG 1 cut(s) 440
HphI GGTGA 2 cut(s) 373, 764
Hpy166II GTNNAC 6 cut(s) 100, 286, 437, 677, 805, 905
Hpy188I TCNGA 8 cut(s) 49, 211, 259, 279, 358, 589, 988, 1002
Hpy188III TCNNGA 6 cut(s) 161, 197, 311, 383, 394, 865
Hpy8I GTNNAC 6 cut(s) 100, 286, 437, 677, 805, 905
Hpy99I CGWCG 1 cut(s) 339
HpyAV CCTTC 2 cut(s) 194, 779
HpyCH4III ACNGT 4 cut(s) 82, 733, 809, 1021
HpyCH4IV ACGT 1 cut(s) 513
HpyCH4V TGCA 9 cut(s) 100, 239, 437, 519, 742, 805, 841, 920, 933
HpyF10VI GCNNNNNNNGC 3 cut(s) 114, 719, 930
HpyF3I CTNAG 4 cut(s) 357, 492, 636, 896
HpySE526I ACGT 1 cut(s) 513
Hsp92II CATG 4 cut(s) 149, 293, 478, 713
HspAI GCGC 1 cut(s) 699
KpnI GGTACC 1 cut(s) 1068
Ksp22I TGATCA 1 cut(s) 30
Kzo9I GATC 6 cut(s) 30, 157, 193, 385, 424, 832
LmnI GCTCC 1 cut(s) 484
Lsp1109I GCAGC 3 cut(s) 117, 853, 930
LweI GCATC 2 cut(s) 263, 652
MaeI CTAG 1 cut(s) 695
MaeII ACGT 1 cut(s) 513
MaeIII GTNAC 3 cut(s) 470, 611, 1077
MalI GATC 6 cut(s) 32, 159, 195, 387, 426, 834
MboI GATC 6 cut(s) 30, 157, 193, 385, 424, 832
MboII GAAGA 8 cut(s) 176, 326, 376, 512, 728, 752, 827, 1001
MflI RGATCY 1 cut(s) 832
MhlI GDGCHC 5 cut(s) 102, 408, 439, 807, 814
MluCI AATT 3 cut(s) 38, 216, 448
MlyI GAGTC 2 cut(s) 347, 619
MmeI TCCRAC 2 cut(s) 226, 506
MseI TTAA 3 cut(s) 219, 822, 950
MslI CAYNNNNRTG 2 cut(s) 618, 753
MspI CCGG 1 cut(s) 440
MspR9I CCNGG 1 cut(s) 265
Mva1269I GAATGC 1 cut(s) 180
MvaI CCWGG 1 cut(s) 265
MvnI CGCG 1 cut(s) 384
MwoI GCNNNNNNNGC 3 cut(s) 114, 719, 930
NcoI CCATGG 1 cut(s) 289
NdeII GATC 6 cut(s) 30, 157, 193, 385, 424, 832
NlaIII CATG 4 cut(s) 149, 293, 478, 713
NlaIV GGNNCC 4 cut(s) 332, 480, 967, 1066
NmeAIII GCCGAG 1 cut(s) 633
NmuCI GTSAC 2 cut(s) 611, 1077
NruI TCGCGA 1 cut(s) 384
NspI RCATGY 1 cut(s) 713
PceI AGGCCT 3 cut(s) 117, 204, 1056
PctI GAATGC 1 cut(s) 180
PfeI GAWTC 3 cut(s) 212, 397, 861
PkrI GCNGC 4 cut(s) 6, 107, 843, 945
PleI GAGTC 2 cut(s) 347, 618
PpsI GAGTC 2 cut(s) 347, 618
Psp6I CCWGG 1 cut(s) 263
PspGI CCWGG 1 cut(s) 263
PspN4I GGNNCC 4 cut(s) 332, 480, 967, 1066
PspPI GGNCC 3 cut(s) 331, 902, 965
PstI CTGCAG 1 cut(s) 843
PsuI RGATCY 1 cut(s) 832
RruI TCGCGA 1 cut(s) 384
RsaI GTAC 7 cut(s) 68, 137, 539, 634, 795, 1007, 1066
RsaNI GTAC 7 cut(s) 67, 136, 538, 633, 794, 1006, 1065
RseI CAYNNNNRTG 2 cut(s) 618, 753
SaqAI TTAA 3 cut(s) 219, 822, 950
SatI GCNGC 4 cut(s) 5, 106, 842, 944
Sau3AI GATC 6 cut(s) 30, 157, 193, 385, 424, 832
Sau96I GGNCC 3 cut(s) 331, 902, 965
ScaI AGTACT 2 cut(s) 137, 539
SchI GAGTC 2 cut(s) 347, 619
ScrFI CCNGG 1 cut(s) 265
SduI GDGCHC 5 cut(s) 102, 408, 439, 807, 814
SfaNI GCATC 2 cut(s) 263, 652
SfcI CTRYAG 1 cut(s) 839
SinI GGWCC 3 cut(s) 331, 902, 965
SmiMI CAYNNNNRTG 2 cut(s) 618, 753
Sse9I AATT 3 cut(s) 38, 216, 448
SseBI AGGCCT 3 cut(s) 117, 204, 1056
SspI AATATT 1 cut(s) 826
SspMI CTAG 1 cut(s) 695
StuI AGGCCT 3 cut(s) 117, 204, 1056
StyD4I CCNGG 1 cut(s) 263
StyI CCWWGG 1 cut(s) 289
TaaI ACNGT 4 cut(s) 82, 733, 809, 1021
TaiI ACGT 1 cut(s) 516
TaqI TCGA 4 cut(s) 120, 542, 576, 1059
TasI AATT 3 cut(s) 38, 216, 448
TatI WGTACW 5 cut(s) 66, 135, 537, 632, 1005
TfiI GAWTC 3 cut(s) 212, 397, 861
Tru1I TTAA 3 cut(s) 219, 822, 950
Tru9I TTAA 3 cut(s) 219, 822, 950
TscAI CASTG 1 cut(s) 160
TseFI GTSAC 2 cut(s) 611, 1077
TseI GCWGC 4 cut(s) 4, 105, 841, 943
Tsp45I GTSAC 2 cut(s) 611, 1077
TspDTI ATGAA 1 cut(s) 569
TspGWI ACGGA 2 cut(s) 39, 323
TspRI CASTG 1 cut(s) 160
VneI GTGCAC 3 cut(s) 98, 435, 803
VpaK11BI GGWCC 3 cut(s) 331, 902, 965
XceI RCATGY 1 cut(s) 713
XspI CTAG 1 cut(s) 695
ZrmI AGTACT 2 cut(s) 137, 539
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.