Rmu_sc0000846.1_g000012

Belongs to the iron ascorbate-dependent oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000846.1
OG0000054
Physical Location & Seq
Forward (+)
53229 .. 56108
2880 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000846.1_g000012.1.cds

Sequence Viewer

Length: 1395 bp
atgttggccgggaattcaagcgaccaagaagaccttcttctcaaacaggtgaaggccttttacgaatcgaaagctggtgtgaaagggctcgtcgatgcaggaatcacgaaaatcccacaaattttcatccatccgccaatagatcccggccaagtaacccaaaccgagttcagtattccagtggtggacctcgctgacgctgcggttggcatgagcaggcatacggaggtggctgagggagtccggcgggctgcggagactgtgggcttgttcctggtggtgaaccatgggatacctaagagagtattggaggggatgctgcaggcgatccgtgggtttcatgagctgcccaaggaagtgaaagctcactactatagtatagaccccaagaggaaggtcaagtctgctggtagccataagctcggtaaaccaacttctctaccttggagggactctttgttatgtgacatgatttctgagcctcttgatcctcaagaattgcctgagatttgcagagacataactatggagtacttaaaacgtgttcacaaattaggtgtcagtttatttgaattgctatctgagggactggggctcaaacctgaccaccttctgggcttgggctgtgcaaatggacatttgattgctggtcattactctccaccatgccctgagcctgaattgaccatcaacaatggtcaacacacagatctcggttttctcagcatcgtacttcaagacaatatcaatgcactccagcttttgtatcaaaaccagtggattgatgtccctaccgtgcccggagctctcgtggtgaatattggagatttcttgcaggcaagcattgtattctactctcaaaacaataaatacataagtgtcatgcatagagtacttgccaagaaggaaggtccaagagtttctgtgggatgttttttcaatcacattccacaagaaaattctgcagggagactcttggagccgattaaggagttgatatcagaaaaaaatcccccaatataccgtggaacaagtgcgatagattatataggccactacaggaaagcgttgatcaatgggagcaagtgcggcggttgcactttgactgggcaaagggagggatttgctgatgtgttgaccgggggctgccagctcggcccaaggcataacgtggctgatgtcatcacctttcccatgaagcatgacgcgctgaaggcagaaattggctcacacaaggctgaagcgtggcgccgcaaaggaaggtggagtgaggccagtcgcttgtcgtgtagcggctgtgcatgggccagacaacttccacatgcaacagagctgttggctcattttgaaaaggtgcctaaggttcatgaaatcctagccatccgtttcaattaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2OG-FeII_Oxy DIOX_N

Protein Analysis

464

Amino Acids

51.11

Weight (kDa)

8.0

Isoelectric Point (pI)

41.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000054)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03400 AT1G03400 AT1G03410 AT1G03410 AT1G04350 AT1G06620 AT1G06620 AT1G06640 AT1G06640 AT1G06640 AT1G06645 AT1G06650 AT1G06650 AT2G25450 AT2G30830 AT2G30840 AT2G30840 AT2G30840 AT3G61400 AT3G61400 AT5G43440 AT5G43440 AT5G43450 AT5G43450 AT5G59530 AT5G59540 AT5G59540
fragaria_vesca FvH4_2g03190 FvH4_2g03220 FvH4_3g07861 FvH4_3g31880 FvH4_3g31880 FvH4_3g31880 FvH4_4g03241 FvH4_4g03250 FvH4_4g03251 FvH4_4g03260 FvH4_4g03300 FvH4_4g03301 FvH4_4g03301 FvH4_4g03301 FvH4_4g03302 FvH4_4g03303 FvH4_4g03303 FvH4_4g03304 FvH4_4g03305 FvH4_4g03323 FvH4_4g03323 FvH4_5g19290 FvH4_5g19290 FvH4_5g19290 FvH4_5g19291 FvH4_5g19291 FvH4_5g19310 FvH4_5g19310 FvH4_5g19310 FvH4_5g19320 FvH4_5g19321 FvH4_5g19321 FvH4_5g19321 FvH4_7g31470
malus_domestica MD00G1220300.v1.1 MD02G1050800.v1.1 MD02G1053200.v1.1 MD02G1053300.v1.1 MD02G1054900.v1.1 MD03G1032300.v1.1 MD03G1245000.v1.1 MD03G1245300.v1.1 MD05G1014200.v1.1 MD13G1210900.v1.1 MD13G1211000.v1.1 MD13G1211100.v1.1 MD13G1211200.v1.1 MD13G1211800.v1.1 MD13G1211900.v1.1 MD13G1212000.v1.1 MD16G1214100.v1.1 MD16G1214300.v1.1 MD16G1214400.v1.1 MD16G1214600.v1.1 MD16G1215000.v1.1 MD16G1215200.v1.1 MD16G1215300.v1.1 MD16G1215500.v1.1 MD16G1271000.v1.1
prunus_persica Prupe.1G035500_v2.0.a1 Prupe.1G035700_v2.0.a1 Prupe.1G035800_v2.0.a1 Prupe.1G035900_v2.0.a1 Prupe.1G036000_v2.0.a1 Prupe.1G036100_v2.0.a1 Prupe.1G036200_v2.0.a1 Prupe.1G036400_v2.0.a1 Prupe.1G036500_v2.0.a1 Prupe.1G036600_v2.0.a1 Prupe.1G036700_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G191000_v2.0.a1 Prupe.1G191100_v2.0.a1
pyrus_communis pycom13g18340 pycom13g18350 pycom13g18380 pycom16g17990 pycom16g18010 pycom16g18020
rosa_chinensis RchiOBHm_Chr2g0124051 RchiOBHm_Chr4g0391811 RchiOBHm_Chr4g0391931 RchiOBHm_Chr4g0391961 RchiOBHm_Chr4g0391971 RchiOBHm_Chr4g0391981 RchiOBHm_Chr4g0391991 RchiOBHm_Chr4g0392031 RchiOBHm_Chr4g0392051 RchiOBHm_Chr4g0392061 RchiOBHm_Chr4g0392071 RchiOBHm_Chr4g0392081 RchiOBHm_Chr4g0392091 RchiOBHm_Chr4g0392111 RchiOBHm_Chr4g0392121 RchiOBHm_Chr4g0392131 RchiOBHm_Chr4g0392141 RchiOBHm_Chr4g0392151 RchiOBHm_Chr4g0392211 RchiOBHm_Chr4g0392251 RchiOBHm_Chr4g0392261 RchiOBHm_Chr4g0392301 RchiOBHm_Chr4g0392311 RchiOBHm_Chr4g0392341 RchiOBHm_Chr4g0409221 RchiOBHm_Chr4g0410991 RchiOBHm_Chr4g0429131 RchiOBHm_Chr4g0437051 RchiOBHm_Chr5g0038681 RchiOBHm_Chr5g0047071 RchiOBHm_Chr5g0058651 RchiOBHm_Chr6g0248121 RchiOBHm_Chr6g0248141 RchiOBHm_Chr6g0248291 RchiOBHm_Chr6g0248341 RchiOBHm_Chr6g0248351
rosa_laevigata RLG00000006473 RLG00000006475 RLG00000006667 RLG00000007095 RLG00000009819 RLG00000009820 RLG00000009821 RLG00000009822 RLG00000009825 RLG00000009826 RLG00000009830 RLG00000009831 RLG00000009832 RLG00000009833 RLG00000009834 RLG00000009835 RLG00000009837 RLG00000009838 RLG00000009839 RLG00000009841 RLG00000009842 RLG00000009844 RLG00000009845 RLG00000009846 RLG00000009847 RLG00000009848 RLG00000009849 RLG00000015160 RLG00000015161 RLG00000017791 RLG00000018779 RLG00000034461 RLG00000035237
rosa_multiflora Rmu_co8253791.1_g000001 Rmu_co8348827.1_g000001 Rmu_co8400489.1_g000001 Rmu_sc0000383.1_g000003 Rmu_sc0000383.1_g000005 Rmu_sc0000383.1_g000026 Rmu_sc0000846.1_g000012 Rmu_sc0001231.1_g000013 Rmu_sc0001231.1_g000026 Rmu_sc0001231.1_g000028 Rmu_sc0001800.1_g000027 Rmu_sc0003436.1_g000022 Rmu_sc0004104.1_g000004 Rmu_sc0004295.1_g000021 Rmu_sc0004295.1_g000031 Rmu_sc0004928.1_g000002 Rmu_sc0004928.1_g000008 Rmu_sc0004928.1_g000011 Rmu_sc0004928.1_g000027 Rmu_sc0004977.1_g000007 Rmu_sc0005018.1_g000002 Rmu_sc0005091.1_g000026 Rmu_sc0005091.1_g000032 Rmu_sc0005091.1_g000033 Rmu_sc0005817.1_g000003 Rmu_sc0005817.1_g000008 Rmu_sc0012482.1_g000002 Rmu_sc0014210.1_g000001 Rmu_sc0016150.1_g000001 Rmu_sc0029701.1_g000002 Rmu_sc0036585.1_g000001 Rmu_sc0037489.1_g000002
rosa_roxburghii Rroxscaffold_1G00021790 Rroxscaffold_1G00021800 Rroxscaffold_1G00034360 Rroxscaffold_2G00120130 Rroxscaffold_5G00337210 Rroxscaffold_5G00337220 Rroxscaffold_5G00337230 Rroxscaffold_5G00337250 Rroxscaffold_5G00337260 Rroxscaffold_5G00337270 Rroxscaffold_5G00337300 Rroxscaffold_5G00337310 Rroxscaffold_5G00337320 Rroxscaffold_5G00337330 Rroxscaffold_5G00337350 Rroxscaffold_5G00337370 Rroxscaffold_5G00337390 Rroxscaffold_5G00337400 Rroxscaffold_5G00337420 Rroxscaffold_5G00337430 Rroxscaffold_5G00337450 Rroxscaffold_5G00337470 Rroxscaffold_5G00337480 Rroxscaffold_5G00337520 Rroxscaffold_5G00378130 Rroxscaffold_6G00397800 Rroxscaffold_7G00213320 Rroxscaffold_7G00213390 Rroxscaffold_7G00213420 Rroxscaffold_7G00213470
rosa_rugosa Rorug02G0070100 Rorug02G0070100 Rorug02G0070100 Rorug02G0128600 Rorug02G0128700 Rorug02G0128800 Rorug02G0128900 Rorug02G0248400 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337100 Rorug03G0337200 Rorug03G0337300 Rorug03G0337600 Rorug03G0337700 Rorug03G0337800 Rorug03G0337900 Rorug03G0337900 Rorug03G0338000 Rorug03G0338100 Rorug03G0338200 Rorug04G0233200.1 Rorug04G0297900 Rorug05G0233700 Rorug05G0316700 Rorug05G0530800 Rorug05G0530900
rosa_samantha Rh2AG307400 Rh2BG316500 Rh2DG331200 Rh4AG039300 Rh4AG039400 Rh4AG039600 Rh4AG039700 Rh4AG039900 Rh4AG040000 Rh4AG040100 Rh4AG040300 Rh4AG040500 Rh4AG040700 Rh4AG041000 Rh4AG041100 Rh4AG041600 Rh4AG041800 Rh4AG041900 Rh4AG352400 Rh4BG033200 Rh4BG034100 Rh4BG034300 Rh4BG034700 Rh4BG034800 Rh4BG035200 Rh4BG035400 Rh4BG036000 Rh4BG036200 Rh4BG036300 Rh4BG036500 Rh4BG036800 Rh4BG361700 Rh4CG042000 Rh4CG042200 Rh4CG042300 Rh4CG042500 Rh4CG042600 Rh4CG042800 Rh4CG043200 Rh4CG043400 Rh4CG043500 Rh4CG043700 Rh4CG043800 Rh4CG044200 Rh4CG044500 Rh4CG044700 Rh4CG177000 Rh4CG310600 Rh4CG376000 Rh4DG036300 Rh4DG036900 Rh4DG037000 Rh4DG037100 Rh4DG037200 Rh4DG037300 Rh4DG037500 Rh4DG037700 Rh4DG037800 Rh4DG037900 Rh4DG038000 Rh4DG038200 Rh4DG038500 Rh4DG038700 Rh4DG038900 Rh4DG159600 Rh5CG347900 Rh5DG409900 Rh6AG045300 Rh6AG045800 Rh6AG046000 Rh6AG046100 Rh6BG040600 Rh6BG040700 Rh6BG042200 Rh6BG042700 Rh6BG042800 Rh6DG035900 Rh6DG036100 Rh6DG036200
rosa_wichuraiana Rw0G010420 Rw2G024780 Rw4G003020 Rw4G003070 Rw4G003080 Rw4G003090 Rw4G003100 Rw4G003130 Rw4G003140 Rw4G003150 Rw4G003180 Rw4G003190 Rw4G003200 Rw4G003210 Rw4G003220 Rw4G003240 Rw4G003270 Rw4G025050 Rw4G030850 Rw6G003930 Rw6G004000 Rw6G004030 Rw6G004040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 1248, 1354
AccB7I CCANNNNNTGG 1 cut(s) 613
AccII CGCG 1 cut(s) 1208
AciI CCGC 8 cut(s) 134, 203, 247, 254, 1089, 1092, 1252, 1293
AclWI GGATC 3 cut(s) 137, 322, 482
AcoI YGGCCR 2 cut(s) 6, 148
AcsI RAATTY 3 cut(s) 13, 120, 958
AcuI CTGAAG 2 cut(s) 1232, 1260
AcyI GRCGYC 1 cut(s) 1249
AfaI GTAC 3 cut(s) 533, 732, 894
AfiI CCNNNNNNNGG 1 cut(s) 613
AflIII ACRYGT 1 cut(s) 541
AgsI TTSAA 6 cut(s) 18, 572, 737, 940, 1349, 1390
AjnI CCWGG 1 cut(s) 273
AjuI GAANNNNNNNTTGG 2 cut(s) 18, 50
AluBI AGCT 8 cut(s) 74, 346, 365, 421, 760, 806, 1153, 1333
AluI AGCT 8 cut(s) 74, 346, 365, 421, 760, 806, 1153, 1333
Alw21I GWGCWC 1 cut(s) 808
Alw26I GTCTC 3 cut(s) 251, 510, 964
AlwI GGATC 3 cut(s) 137, 322, 482
AoxI GGCC 7 cut(s) 6, 54, 148, 1051, 1156, 1272, 1305
ApeKI GCWGC 5 cut(s) 200, 251, 319, 346, 1146
ApoI RAATTY 3 cut(s) 13, 120, 958
ArsI GACNNNNNNTTYG 2 cut(s) 543, 575
Asp700I GAANNNNTTC 1 cut(s) 33
AspLEI GCGC 2 cut(s) 1210, 1251
AspS9I GGNCC 4 cut(s) 187, 911, 1157, 1305
AsuC2I CCSGG 4 cut(s) 10, 147, 801, 1141
AsuHPI GGTGA 4 cut(s) 61, 292, 826, 1177
AvaII GGWCC 2 cut(s) 187, 911
AxyI CCTNAGG 1 cut(s) 1359
BaeGI GKGCMC 1 cut(s) 801
BanI GGYRCC 2 cut(s) 1248, 1354
BanII GRGCYC 3 cut(s) 90, 597, 808
BarI GAAGNNNNNNTAC 4 cut(s) 44, 76, 418, 450
BauI CACGAG 1 cut(s) 809
BbsI GAAGAC 1 cut(s) 36
Bbv12I GWGCWC 1 cut(s) 808
BbvCI CCTCAGC 1 cut(s) 234
BbvI GCAGC 5 cut(s) 187, 238, 306, 333, 1133
BccI CCATC 3 cut(s) 138, 695, 1388
BciT130I CCWGG 1 cut(s) 275
BciVI GTATCC 1 cut(s) 285
BclI TGATCA 1 cut(s) 1071
BcnI CCSGG 4 cut(s) 10, 147, 801, 1141
BcoDI GTCTC 3 cut(s) 251, 510, 964
BfaI CTAG 1 cut(s) 1376
BfmI CTRYAG 4 cut(s) 320, 373, 963, 1057
BfoI RGCGCY 1 cut(s) 1252
BfuI GTATCC 1 cut(s) 285
BglI GCCNNNNNGGC 1 cut(s) 1155
BglII AGATCT 1 cut(s) 709
BisI GCNGC 8 cut(s) 201, 252, 320, 347, 1090, 1147, 1252, 1294
BlsI GCNGC 8 cut(s) 202, 253, 321, 348, 1091, 1148, 1253, 1295
BmcAI AGTACT 2 cut(s) 533, 894
Bme1390I CCNGG 5 cut(s) 10, 147, 275, 801, 1141
Bme18I GGWCC 2 cut(s) 187, 911
BmgT120I GGNCC 4 cut(s) 187, 911, 1157, 1305
BmiI GGNNCC 3 cut(s) 981, 1250, 1356
BmrFI CCNGG 5 cut(s) 10, 147, 275, 801, 1141
BmrI ACTGGG 2 cut(s) 599, 1116
BmsI GCATC 3 cut(s) 85, 306, 735
BmuI ACTGGG 2 cut(s) 599, 1116
BpiI GAAGAC 1 cut(s) 36
BpmI CTGGAG 1 cut(s) 740
Bpu10I CCTNAGC 2 cut(s) 234, 672
BpuEI CTTGAG 1 cut(s) 477
BpuMI CCSGG 4 cut(s) 10, 147, 801, 1141
BsaHI GRCGYC 1 cut(s) 1249
BsaJI CCNNGG 7 cut(s) 286, 331, 351, 443, 1024, 1140, 1160
BsaXI ACNNNNNCTCC 2 cut(s) 795, 825
Bsc4I CCNNNNNNNGG 1 cut(s) 613
Bse1I ACTGG 5 cut(s) 179, 594, 775, 1111, 1275
Bse21I CCTNAGG 1 cut(s) 1359
BseBI CCWGG 1 cut(s) 275
BseDI CCNNGG 7 cut(s) 286, 331, 351, 443, 1024, 1140, 1160
BseGI GGATG 5 cut(s) 126, 130, 321, 935, 1380
BseLI CCNNNNNNNGG 1 cut(s) 613
BseMII CTCAG 6 cut(s) 225, 468, 495, 573, 663, 736
BseNI ACTGG 5 cut(s) 179, 594, 775, 1111, 1275
BseSI GKGCMC 1 cut(s) 801
BseXI GCAGC 5 cut(s) 187, 238, 306, 333, 1133
Bsh1236I CGCG 1 cut(s) 1208
BshFI GGCC 7 cut(s) 8, 56, 150, 1053, 1158, 1274, 1307
BshNI GGYRCC 2 cut(s) 1248, 1354
BsiHKAI GWGCWC 1 cut(s) 808
BsiSI CCGG 5 cut(s) 9, 147, 244, 801, 1140
BslFI GGGAC 3 cut(s) 464, 600, 773
BslI CCNNNNNNNGG 1 cut(s) 613
BsmAI GTCTC 3 cut(s) 251, 510, 964
BsmFI GGGAC 3 cut(s) 464, 600, 773
BsnI GGCC 7 cut(s) 8, 56, 150, 1053, 1158, 1274, 1307
Bsp1286I GDGCHC 4 cut(s) 90, 597, 801, 808
Bsp143I GATC 5 cut(s) 142, 327, 487, 709, 1071
Bsp19I CCATGG 1 cut(s) 286
BspACI CCGC 8 cut(s) 134, 203, 247, 254, 1089, 1092, 1252, 1293
BspANI GGCC 7 cut(s) 8, 56, 150, 1053, 1158, 1274, 1307
BspCNI CTCAG 6 cut(s) 226, 469, 496, 574, 664, 735
BspFNI CGCG 1 cut(s) 1208
BspHI TCATGA 2 cut(s) 340, 1366
BspLI GGNNCC 3 cut(s) 981, 1250, 1356
BspMAI CTGCAG 2 cut(s) 324, 967
BspPI GGATC 3 cut(s) 137, 322, 482
BspT107I GGYRCC 2 cut(s) 1248, 1354
BsrI ACTGG 5 cut(s) 179, 594, 775, 1111, 1275
BssECI CCNNGG 7 cut(s) 286, 331, 351, 443, 1024, 1140, 1160
BssMI GATC 5 cut(s) 142, 327, 487, 709, 1071
BssNI GRCGYC 1 cut(s) 1249
BssSI CACGAG 1 cut(s) 809
BssT1I CCWWGG 4 cut(s) 286, 351, 443, 1160
Bst2BI CACGAG 1 cut(s) 809
Bst2UI CCWGG 1 cut(s) 275
Bst4CI ACNGT 3 cut(s) 262, 796, 1025
BstACI GRCGYC 1 cut(s) 1249
BstC8I GCNNGC 6 cut(s) 218, 249, 324, 837, 841, 1151
BstDEI CTNAG 8 cut(s) 234, 297, 477, 504, 582, 672, 722, 1359
BstDSI CCRYGG 3 cut(s) 286, 331, 1024
BstF5I GGATG 5 cut(s) 126, 130, 321, 935, 1380
BstFNI CGCG 1 cut(s) 1208
BstH2I RGCGCY 1 cut(s) 1252
BstHHI GCGC 2 cut(s) 1210, 1251
BstKTI GATC 5 cut(s) 145, 330, 490, 712, 1074
BstMAI GTCTC 3 cut(s) 251, 510, 964
BstMBI GATC 5 cut(s) 142, 327, 487, 709, 1071
BstMWI GCNNNNNNNGC 6 cut(s) 200, 1089, 1095, 1155, 1207, 1214
BstNI CCWGG 1 cut(s) 275
BstNSI RCATGY 1 cut(s) 1325
BstSCI CCNGG 5 cut(s) 8, 145, 273, 799, 1139
BstSFI CTRYAG 4 cut(s) 320, 373, 963, 1057
BstSLI GKGCMC 1 cut(s) 801
BstUI CGCG 1 cut(s) 1208
BstV1I GCAGC 5 cut(s) 187, 238, 306, 333, 1133
BstV2I GAAGAC 1 cut(s) 36
BstX2I RGATCY 2 cut(s) 142, 709
BstYI RGATCY 2 cut(s) 142, 709
Bsu36I CCTNAGG 1 cut(s) 1359
BsuI GTATCC 1 cut(s) 285
BsuRI GGCC 7 cut(s) 8, 56, 150, 1053, 1158, 1274, 1307
BtgI CCRYGG 3 cut(s) 286, 331, 1024
BtsCI GGATG 5 cut(s) 126, 130, 321, 935, 1380
BtsIMutI CAGTG 2 cut(s) 186, 782
Cac8I GCNNGC 6 cut(s) 218, 249, 324, 837, 841, 1151
CciI TCATGA 2 cut(s) 340, 1366
CfoI GCGC 2 cut(s) 1210, 1251
Cfr13I GGNCC 4 cut(s) 187, 911, 1157, 1305
CseI GACGC 2 cut(s) 206, 1214
Csp6I GTAC 3 cut(s) 532, 731, 893
CspCI CAANNNNNGTGG 2 cut(s) 758, 793
CviQI GTAC 3 cut(s) 532, 731, 893
DdeI CTNAG 8 cut(s) 234, 297, 477, 504, 582, 672, 722, 1359
DinI GGCGCC 1 cut(s) 1250
DpnI GATC 5 cut(s) 144, 329, 489, 711, 1073
DpnII GATC 5 cut(s) 142, 327, 487, 709, 1071
EaeI YGGCCR 2 cut(s) 6, 148
EciI GGCGGA 1 cut(s) 123
Ecl136II GAGCTC 1 cut(s) 806
Eco130I CCWWGG 4 cut(s) 286, 351, 443, 1160
Eco147I AGGCCT 1 cut(s) 56
Eco24I GRGCYC 3 cut(s) 90, 597, 808
Eco32I GATATC 1 cut(s) 999
Eco47I GGWCC 2 cut(s) 187, 911
Eco53kI GAGCTC 1 cut(s) 806
Eco57I CTGAAG 2 cut(s) 1232, 1260
Eco81I CCTNAGG 1 cut(s) 1359
EcoICRI GAGCTC 1 cut(s) 806
EcoRI GAATTC 1 cut(s) 13
EcoRII CCWGG 1 cut(s) 273
EcoRV GATATC 1 cut(s) 999
EcoT14I CCWWGG 4 cut(s) 286, 351, 443, 1160
EcoT22I ATGCAT 1 cut(s) 888
EcoT38I GRGCYC 3 cut(s) 90, 597, 808
EgeI GGCGCC 1 cut(s) 1250
EheI GGCGCC 1 cut(s) 1250
ErhI CCWWGG 4 cut(s) 286, 351, 443, 1160
FalI AAGNNNNNCTT 4 cut(s) 18, 50, 21, 53
FaqI GGGAC 3 cut(s) 464, 600, 773
FauI CCCGC 1 cut(s) 240
FbaI TGATCA 1 cut(s) 1071
Fnu4HI GCNGC 8 cut(s) 201, 252, 320, 347, 1090, 1147, 1252, 1294
FokI GGATG 5 cut(s) 113, 117, 328, 942, 1367
FriOI GRGCYC 3 cut(s) 90, 597, 808
Fsp4HI GCNGC 8 cut(s) 201, 252, 320, 347, 1090, 1147, 1252, 1294
FspBI CTAG 1 cut(s) 1376
GlaI GCGC 2 cut(s) 1209, 1250
GluI GCNGC 8 cut(s) 201, 252, 320, 347, 1090, 1147, 1252, 1294
GsuI CTGGAG 1 cut(s) 740
HaeII RGCGCY 1 cut(s) 1252
HaeIII GGCC 7 cut(s) 8, 56, 150, 1053, 1158, 1274, 1307
HapII CCGG 5 cut(s) 9, 147, 244, 801, 1140
HgaI GACGC 2 cut(s) 206, 1214
HhaI GCGC 2 cut(s) 1210, 1251
Hin1I GRCGYC 1 cut(s) 1249
Hin6I GCGC 2 cut(s) 1208, 1249
HinP1I GCGC 2 cut(s) 1208, 1249
HincII GTYRAC 2 cut(s) 701, 1137
HindII GTYRAC 2 cut(s) 701, 1137
HinfI GANTC 5 cut(s) 65, 102, 240, 452, 972
HpaII CCGG 5 cut(s) 9, 147, 244, 801, 1140
HphI GGTGA 4 cut(s) 61, 292, 826, 1177
Hpy166II GTNNAC 6 cut(s) 187, 283, 428, 547, 701, 1137
Hpy188I TCNGA 3 cut(s) 478, 583, 1003
Hpy188III TCNNGA 6 cut(s) 106, 341, 485, 494, 737, 1367
Hpy8I GTNNAC 6 cut(s) 187, 283, 428, 547, 701, 1137
Hpy99I CGWCG 1 cut(s) 95
HpyAV CCTTC 8 cut(s) 44, 46, 388, 620, 898, 902, 1207, 1254
HpyCH4III ACNGT 3 cut(s) 262, 796, 1025
HpyCH4IV ACGT 2 cut(s) 541, 1170
HpyF10VI GCNNNNNNNGC 6 cut(s) 200, 1089, 1095, 1155, 1207, 1214
HpyF3I CTNAG 8 cut(s) 234, 297, 477, 504, 582, 672, 722, 1359
HpySE526I ACGT 2 cut(s) 541, 1170
Hsp92I GRCGYC 1 cut(s) 1249
HspAI GCGC 2 cut(s) 1208, 1249
KasI GGCGCC 1 cut(s) 1248
Ksp22I TGATCA 1 cut(s) 1071
Kzo9I GATC 5 cut(s) 142, 327, 487, 709, 1071
LmnI GCTCC 3 cut(s) 803, 979, 1080
Lsp1109I GCAGC 5 cut(s) 187, 238, 306, 333, 1133
LweI GCATC 3 cut(s) 85, 306, 735
MaeI CTAG 1 cut(s) 1376
MaeII ACGT 2 cut(s) 541, 1170
MaeIII GTNAC 2 cut(s) 154, 464
MalI GATC 5 cut(s) 144, 329, 489, 711, 1073
MboI GATC 5 cut(s) 142, 327, 487, 709, 1071
MboII GAAGA 2 cut(s) 29, 41
MflI RGATCY 2 cut(s) 142, 709
MhlI GDGCHC 4 cut(s) 90, 597, 801, 808
MluCI AATT 9 cut(s) 13, 120, 497, 551, 572, 680, 958, 1221, 1390
Mly113I GGCGCC 1 cut(s) 1249
MlyI GAGTC 3 cut(s) 249, 446, 966
Mph1103I ATGCAT 1 cut(s) 888
MroXI GAANNNNTTC 1 cut(s) 33
MseI TTAA 3 cut(s) 536, 987, 1393
MslI CAYNNNNRTG 1 cut(s) 524
MspI CCGG 5 cut(s) 9, 147, 244, 801, 1140
MspR9I CCNGG 5 cut(s) 10, 147, 275, 801, 1141
MvaI CCWGG 1 cut(s) 275
MvnI CGCG 1 cut(s) 1208
MwoI GCNNNNNNNGC 6 cut(s) 200, 1089, 1095, 1155, 1207, 1214
NarI GGCGCC 1 cut(s) 1249
NciI CCSGG 4 cut(s) 10, 147, 801, 1141
NcoI CCATGG 1 cut(s) 286
NdeII GATC 5 cut(s) 142, 327, 487, 709, 1071
NlaIV GGNNCC 3 cut(s) 981, 1250, 1356
NmeAIII GCCGAG 1 cut(s) 1134
NmuCI GTSAC 1 cut(s) 464
NsiI ATGCAT 1 cut(s) 888
NspI RCATGY 1 cut(s) 1325
PagI TCATGA 2 cut(s) 340, 1366
PceI AGGCCT 1 cut(s) 56
PdmI GAANNNNTTC 1 cut(s) 33
PfeI GAWTC 2 cut(s) 65, 102
PflMI CCANNNNNTGG 1 cut(s) 613
PkrI GCNGC 8 cut(s) 202, 253, 321, 348, 1091, 1148, 1253, 1295
PleI GAGTC 3 cut(s) 248, 446, 966
PluTI GGCGCC 1 cut(s) 1252
PpsI GAGTC 3 cut(s) 248, 446, 966
Psp124BI GAGCTC 1 cut(s) 808
Psp6I CCWGG 1 cut(s) 273
PspGI CCWGG 1 cut(s) 273
PspN4I GGNNCC 3 cut(s) 981, 1250, 1356
PspPI GGNCC 4 cut(s) 187, 911, 1157, 1305
PstI CTGCAG 2 cut(s) 324, 967
PsuI RGATCY 2 cut(s) 142, 709
RsaI GTAC 3 cut(s) 533, 732, 894
RsaNI GTAC 3 cut(s) 532, 731, 893
RseI CAYNNNNRTG 1 cut(s) 524
SacI GAGCTC 1 cut(s) 808
SaqAI TTAA 3 cut(s) 536, 987, 1393
SatI GCNGC 8 cut(s) 201, 252, 320, 347, 1090, 1147, 1252, 1294
Sau3AI GATC 5 cut(s) 142, 327, 487, 709, 1071
Sau96I GGNCC 4 cut(s) 187, 911, 1157, 1305
ScaI AGTACT 2 cut(s) 533, 894
SchI GAGTC 3 cut(s) 249, 446, 966
ScrFI CCNGG 5 cut(s) 10, 147, 275, 801, 1141
SduI GDGCHC 4 cut(s) 90, 597, 801, 808
SfaNI GCATC 3 cut(s) 85, 306, 735
SfcI CTRYAG 4 cut(s) 320, 373, 963, 1057
SfoI GGCGCC 1 cut(s) 1250
SinI GGWCC 2 cut(s) 187, 911
SmiMI CAYNNNNRTG 1 cut(s) 524
SmlI CTYRAG 1 cut(s) 492
SmoI CTYRAG 1 cut(s) 492
Sse9I AATT 9 cut(s) 13, 120, 497, 551, 572, 680, 958, 1221, 1390
SseBI AGGCCT 1 cut(s) 56
SsiI CCGC 8 cut(s) 134, 203, 247, 254, 1089, 1092, 1252, 1293
SspDI GGCGCC 1 cut(s) 1248
SspI AATATT 1 cut(s) 820
SspMI CTAG 1 cut(s) 1376
SstI GAGCTC 1 cut(s) 808
StuI AGGCCT 1 cut(s) 56
StyD4I CCNGG 5 cut(s) 8, 145, 273, 799, 1139
StyI CCWWGG 4 cut(s) 286, 351, 443, 1160
TaaI ACNGT 3 cut(s) 262, 796, 1025
TaiI ACGT 2 cut(s) 544, 1173
TaqI TCGA 2 cut(s) 68, 93
TasI AATT 9 cut(s) 13, 120, 497, 551, 572, 680, 958, 1221, 1390
TatI WGTACW 2 cut(s) 531, 892
TauI GCSGC 3 cut(s) 1092, 1254, 1296
TfiI GAWTC 2 cut(s) 65, 102
Tru1I TTAA 3 cut(s) 536, 987, 1393
Tru9I TTAA 3 cut(s) 536, 987, 1393
TscAI CASTG 2 cut(s) 186, 782
TseFI GTSAC 1 cut(s) 464
TseI GCWGC 5 cut(s) 200, 251, 319, 346, 1146
Tsp45I GTSAC 1 cut(s) 464
TspDTI ATGAA 5 cut(s) 115, 329, 1211, 1355, 1383
TspGWI ACGGA 3 cut(s) 239, 320, 1373
TspRI CASTG 2 cut(s) 186, 782
Van91I CCANNNNNTGG 1 cut(s) 613
VpaK11BI GGWCC 2 cut(s) 187, 911
XapI RAATTY 3 cut(s) 13, 120, 958
XceI RCATGY 1 cut(s) 1325
XmnI GAANNNNTTC 1 cut(s) 33
XspI CTAG 1 cut(s) 1376
ZrmI AGTACT 2 cut(s) 533, 894
Zsp2I ATGCAT 1 cut(s) 888
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.