RLG00000009822

Belongs to the iron ascorbate-dependent oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0000054
Physical Location & Seq
Reverse (-)
58459210 .. 58463874
4665 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000009822

Sequence Viewer

Length: 1275 bp
ATGGTCCTGGGAAAATCAAGCGACCCTGATCGTCTGGAGCAGCTGAAGGCCTTCGACGAATCCAAAGCTGGTGTTAAGGGGCTCGTCGATGCCGGAATCACCAAAGTCCCACCCATTTTCGTCCGTCCAAAGAAAGATCCCTCCACCGCTCCCAACTATAAGATATCTGGCCATTTCAGTATTCCAGTGGTTGATCTGGCTGACAATGAAGGAAGATCTGCCGAGGTGATCGACCAAGTCCGGAGGGCCGCAGAGAGCTACGGGTTGTTTCAGGTGGTGAACCATGGGATACCTGAGAGAGTGATGGAGGAGATGATGGAGGCAACGCATGGGTTTCATGAGCTTCCCAGGGAGGCCAAGGCTGAGTACTATGGTAGGGAGCTTGCAAGGAACGTCAAGTACTTCTCTGGCAGCTCCCTCTATCTGTTGATGTTTGCTGATTGGAGGGACACTTTGCAGTGTAACATAAGTGACGAGCAGTTCGATCCTCAAGAAATTCCTCTCGTTTGCAGAGATATAATTATGGAGTATTCTAAGCATGCTCACAAATTAGGTGTCATTTTGTTTGCATTGCTATCTGAGGCGCTTGGGCTTAAACCGGATCACCTCAAAAACATGGATTGTGCAGAGGAGCATGTGATTCTTAATCATTACTATCCCCCATGCCCGGAACCTGAACTAGCTATTGGTACTATCGAACACGCAGATCCTGATTTTCTGACAATCCTACTTCAAGACCAAATTGGTGGACTCCAGGTTTTGTACCAAAACCAATGGATTGATGTTCCTCATGTACCTGGAGCTCTGGTGGTGAACATTGGAGATTTCTTGCAGCTAATGTCAAACAATAAGTTCATAAGCGTCAATCACAGAGTATTGGCTAAAAAGGAAGGTCCTAGAATTTCTGTGGCTTGTTTTTTCAGACCATCACTAGAAAACTCTTCAAGATTGTATGGGCCAATCAAGGAGTTGACATCAGAAGAAAACCCTCCAGTTTACCGAGAAACAACTATGAAAGATTATACTCATTGCCACTACAAACAATGGGAAGCAAATGAGCGATGGCGACGACGAAAGCCTCCAAATCCAGATGATCCATGCGACTTTACTGAGCCGGCCGAAAGCGCCGTCATAGGGATGGTTGAGAATACCAATCACCGGGCAGTAATTGAGCTTGGGGTCAAGCACCGTACACCTCTGCGAGGAGTCGAAGGCGGCGAATTGAGTGGGGAGCAGAATGTCGGCGTCGACTGGGCCTTGTCGGAGCTAAGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2OG-FeII_Oxy DIOX_N

Protein Analysis

425

Amino Acids

47.88

Weight (kDa)

5.37

Isoelectric Point (pI)

42.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 61 - 164 7.7e-19 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 211 - 309 1.4e-34 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000054)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03400 AT1G03400 AT1G03410 AT1G03410 AT1G04350 AT1G06620 AT1G06620 AT1G06640 AT1G06640 AT1G06640 AT1G06645 AT1G06650 AT1G06650 AT2G25450 AT2G30830 AT2G30840 AT2G30840 AT2G30840 AT3G61400 AT3G61400 AT5G43440 AT5G43440 AT5G43450 AT5G43450 AT5G59530 AT5G59540 AT5G59540
fragaria_vesca FvH4_2g03190 FvH4_2g03220 FvH4_3g07861 FvH4_3g31880 FvH4_3g31880 FvH4_3g31880 FvH4_4g03241 FvH4_4g03250 FvH4_4g03251 FvH4_4g03260 FvH4_4g03300 FvH4_4g03301 FvH4_4g03301 FvH4_4g03301 FvH4_4g03302 FvH4_4g03303 FvH4_4g03303 FvH4_4g03304 FvH4_4g03305 FvH4_4g03323 FvH4_4g03323 FvH4_5g19290 FvH4_5g19290 FvH4_5g19290 FvH4_5g19291 FvH4_5g19291 FvH4_5g19310 FvH4_5g19310 FvH4_5g19310 FvH4_5g19320 FvH4_5g19321 FvH4_5g19321 FvH4_5g19321 FvH4_7g31470
malus_domestica MD00G1220300.v1.1 MD02G1050800.v1.1 MD02G1053200.v1.1 MD02G1053300.v1.1 MD02G1054900.v1.1 MD03G1032300.v1.1 MD03G1245000.v1.1 MD03G1245300.v1.1 MD05G1014200.v1.1 MD13G1210900.v1.1 MD13G1211000.v1.1 MD13G1211100.v1.1 MD13G1211200.v1.1 MD13G1211800.v1.1 MD13G1211900.v1.1 MD13G1212000.v1.1 MD16G1214100.v1.1 MD16G1214300.v1.1 MD16G1214400.v1.1 MD16G1214600.v1.1 MD16G1215000.v1.1 MD16G1215200.v1.1 MD16G1215300.v1.1 MD16G1215500.v1.1 MD16G1271000.v1.1
prunus_persica Prupe.1G035500_v2.0.a1 Prupe.1G035700_v2.0.a1 Prupe.1G035800_v2.0.a1 Prupe.1G035900_v2.0.a1 Prupe.1G036000_v2.0.a1 Prupe.1G036100_v2.0.a1 Prupe.1G036200_v2.0.a1 Prupe.1G036400_v2.0.a1 Prupe.1G036500_v2.0.a1 Prupe.1G036600_v2.0.a1 Prupe.1G036700_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G191000_v2.0.a1 Prupe.1G191100_v2.0.a1
pyrus_communis pycom13g18340 pycom13g18350 pycom13g18380 pycom16g17990 pycom16g18010 pycom16g18020
rosa_chinensis RchiOBHm_Chr2g0124051 RchiOBHm_Chr4g0391811 RchiOBHm_Chr4g0391931 RchiOBHm_Chr4g0391961 RchiOBHm_Chr4g0391971 RchiOBHm_Chr4g0391981 RchiOBHm_Chr4g0391991 RchiOBHm_Chr4g0392031 RchiOBHm_Chr4g0392051 RchiOBHm_Chr4g0392061 RchiOBHm_Chr4g0392071 RchiOBHm_Chr4g0392081 RchiOBHm_Chr4g0392091 RchiOBHm_Chr4g0392111 RchiOBHm_Chr4g0392121 RchiOBHm_Chr4g0392131 RchiOBHm_Chr4g0392141 RchiOBHm_Chr4g0392151 RchiOBHm_Chr4g0392211 RchiOBHm_Chr4g0392251 RchiOBHm_Chr4g0392261 RchiOBHm_Chr4g0392301 RchiOBHm_Chr4g0392311 RchiOBHm_Chr4g0392341 RchiOBHm_Chr4g0409221 RchiOBHm_Chr4g0410991 RchiOBHm_Chr4g0429131 RchiOBHm_Chr4g0437051 RchiOBHm_Chr5g0038681 RchiOBHm_Chr5g0047071 RchiOBHm_Chr5g0058651 RchiOBHm_Chr6g0248121 RchiOBHm_Chr6g0248141 RchiOBHm_Chr6g0248291 RchiOBHm_Chr6g0248341 RchiOBHm_Chr6g0248351
rosa_laevigata RLG00000006473 RLG00000006475 RLG00000006667 RLG00000007095 RLG00000009819 RLG00000009820 RLG00000009821 RLG00000009822 RLG00000009825 RLG00000009826 RLG00000009830 RLG00000009831 RLG00000009832 RLG00000009833 RLG00000009834 RLG00000009835 RLG00000009837 RLG00000009838 RLG00000009839 RLG00000009841 RLG00000009842 RLG00000009844 RLG00000009845 RLG00000009846 RLG00000009847 RLG00000009848 RLG00000009849 RLG00000015160 RLG00000015161 RLG00000017791 RLG00000018779 RLG00000034461 RLG00000035237
rosa_multiflora Rmu_co8253791.1_g000001 Rmu_co8348827.1_g000001 Rmu_co8400489.1_g000001 Rmu_sc0000383.1_g000003 Rmu_sc0000383.1_g000005 Rmu_sc0000383.1_g000026 Rmu_sc0000846.1_g000012 Rmu_sc0001231.1_g000013 Rmu_sc0001231.1_g000026 Rmu_sc0001231.1_g000028 Rmu_sc0001800.1_g000027 Rmu_sc0003436.1_g000022 Rmu_sc0004104.1_g000004 Rmu_sc0004295.1_g000021 Rmu_sc0004295.1_g000031 Rmu_sc0004928.1_g000002 Rmu_sc0004928.1_g000008 Rmu_sc0004928.1_g000011 Rmu_sc0004928.1_g000027 Rmu_sc0004977.1_g000007 Rmu_sc0005018.1_g000002 Rmu_sc0005091.1_g000026 Rmu_sc0005091.1_g000032 Rmu_sc0005091.1_g000033 Rmu_sc0005817.1_g000003 Rmu_sc0005817.1_g000008 Rmu_sc0012482.1_g000002 Rmu_sc0014210.1_g000001 Rmu_sc0016150.1_g000001 Rmu_sc0029701.1_g000002 Rmu_sc0036585.1_g000001 Rmu_sc0037489.1_g000002
rosa_roxburghii Rroxscaffold_1G00021790 Rroxscaffold_1G00021800 Rroxscaffold_1G00034360 Rroxscaffold_2G00120130 Rroxscaffold_5G00337210 Rroxscaffold_5G00337220 Rroxscaffold_5G00337230 Rroxscaffold_5G00337250 Rroxscaffold_5G00337260 Rroxscaffold_5G00337270 Rroxscaffold_5G00337300 Rroxscaffold_5G00337310 Rroxscaffold_5G00337320 Rroxscaffold_5G00337330 Rroxscaffold_5G00337350 Rroxscaffold_5G00337370 Rroxscaffold_5G00337390 Rroxscaffold_5G00337400 Rroxscaffold_5G00337420 Rroxscaffold_5G00337430 Rroxscaffold_5G00337450 Rroxscaffold_5G00337470 Rroxscaffold_5G00337480 Rroxscaffold_5G00337520 Rroxscaffold_5G00378130 Rroxscaffold_6G00397800 Rroxscaffold_7G00213320 Rroxscaffold_7G00213390 Rroxscaffold_7G00213420 Rroxscaffold_7G00213470
rosa_rugosa Rorug02G0070100 Rorug02G0070100 Rorug02G0070100 Rorug02G0128600 Rorug02G0128700 Rorug02G0128800 Rorug02G0128900 Rorug02G0248400 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337100 Rorug03G0337200 Rorug03G0337300 Rorug03G0337600 Rorug03G0337700 Rorug03G0337800 Rorug03G0337900 Rorug03G0337900 Rorug03G0338000 Rorug03G0338100 Rorug03G0338200 Rorug04G0233200.1 Rorug04G0297900 Rorug05G0233700 Rorug05G0316700 Rorug05G0530800 Rorug05G0530900
rosa_samantha Rh2AG307400 Rh2BG316500 Rh2DG331200 Rh4AG039300 Rh4AG039400 Rh4AG039600 Rh4AG039700 Rh4AG039900 Rh4AG040000 Rh4AG040100 Rh4AG040300 Rh4AG040500 Rh4AG040700 Rh4AG041000 Rh4AG041100 Rh4AG041600 Rh4AG041800 Rh4AG041900 Rh4AG352400 Rh4BG033200 Rh4BG034100 Rh4BG034300 Rh4BG034700 Rh4BG034800 Rh4BG035200 Rh4BG035400 Rh4BG036000 Rh4BG036200 Rh4BG036300 Rh4BG036500 Rh4BG036800 Rh4BG361700 Rh4CG042000 Rh4CG042200 Rh4CG042300 Rh4CG042500 Rh4CG042600 Rh4CG042800 Rh4CG043200 Rh4CG043400 Rh4CG043500 Rh4CG043700 Rh4CG043800 Rh4CG044200 Rh4CG044500 Rh4CG044700 Rh4CG177000 Rh4CG310600 Rh4CG376000 Rh4DG036300 Rh4DG036900 Rh4DG037000 Rh4DG037100 Rh4DG037200 Rh4DG037300 Rh4DG037500 Rh4DG037700 Rh4DG037800 Rh4DG037900 Rh4DG038000 Rh4DG038200 Rh4DG038500 Rh4DG038700 Rh4DG038900 Rh4DG159600 Rh5CG347900 Rh5DG409900 Rh6AG045300 Rh6AG045800 Rh6AG046000 Rh6AG046100 Rh6BG040600 Rh6BG040700 Rh6BG042200 Rh6BG042700 Rh6BG042800 Rh6DG035900 Rh6DG036100 Rh6DG036200
rosa_wichuraiana Rw0G010420 Rw2G024780 Rw4G003020 Rw4G003070 Rw4G003080 Rw4G003090 Rw4G003100 Rw4G003130 Rw4G003140 Rw4G003150 Rw4G003180 Rw4G003190 Rw4G003200 Rw4G003210 Rw4G003220 Rw4G003240 Rw4G003270 Rw4G025050 Rw4G030850 Rw6G003930 Rw6G004000 Rw6G004030 Rw6G004040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 149
AccI GTMKAC 1 cut(s) 1248
AccIII TCCGGA 1 cut(s) 240
AciI CCGC 3 cut(s) 147, 249, 1215
AclWI GGATC 5 cut(s) 131, 479, 609, 701, 1088
AcoI YGGCCR 2 cut(s) 169, 1116
AcsI RAATTY 2 cut(s) 495, 900
AcuI CTGAAG 1 cut(s) 65
AcyI GRCGYC 1 cut(s) 1245
AfaI GTAC 6 cut(s) 368, 401, 691, 764, 795, 1192
AfiI CCNNNNNNNGG 4 cut(s) 667, 1134, 1158, 1202
AgsI TTSAA 2 cut(s) 734, 945
AjnI CCWGG 4 cut(s) 6, 347, 753, 796
AjuI GAANNNNNNNTTGG 2 cut(s) 669, 701
Alw21I GWGCWC 1 cut(s) 805
AlwI GGATC 5 cut(s) 131, 479, 609, 701, 1088
AlwNI CAGNNNCTG 1 cut(s) 710
Aor13HI TCCGGA 1 cut(s) 240
AoxI GGCC 7 cut(s) 48, 169, 246, 354, 956, 1116, 1254
ApeKI GCWGC 3 cut(s) 40, 411, 832
ApoI RAATTY 2 cut(s) 495, 900
ArsI GACNNNNNNTTYG 6 cut(s) 464, 496, 540, 572, 1113, 1145
Asp700I GAANNNNTTC 1 cut(s) 50
AspLEI GCGC 2 cut(s) 586, 1127
AspS9I GGNCC 5 cut(s) 4, 246, 893, 956, 1254
AsuC2I CCSGG 2 cut(s) 668, 1160
AsuHPI GGTGA 6 cut(s) 91, 238, 289, 596, 823, 1148
AvaII GGWCC 2 cut(s) 4, 893
BalI TGGCCA 1 cut(s) 171
BanII GRGCYC 2 cut(s) 84, 805
Bbv12I GWGCWC 1 cut(s) 805
BbvI GCAGC 3 cut(s) 52, 423, 844
BccI CCATC 5 cut(s) 298, 310, 934, 1056, 1132
BceAI ACGGC 1 cut(s) 1112
BciT130I CCWGG 4 cut(s) 8, 349, 755, 798
BciVI GTATCC 1 cut(s) 282
BcnI CCSGG 2 cut(s) 668, 1160
BfaI CTAG 4 cut(s) 680, 897, 932, 1273
BfoI RGCGCY 2 cut(s) 587, 1128
BfuI GTATCC 1 cut(s) 282
BglII AGATCT 1 cut(s) 215
BisI GCNGC 5 cut(s) 41, 249, 412, 833, 1216
BlpI GCTNAGC 1 cut(s) 1268
BlsI GCNGC 5 cut(s) 42, 250, 413, 834, 1217
BmcAI AGTACT 2 cut(s) 368, 401
Bme1390I CCNGG 6 cut(s) 8, 349, 668, 755, 798, 1160
Bme18I GGWCC 2 cut(s) 4, 893
BmgT120I GGNCC 5 cut(s) 4, 246, 893, 956, 1254
BmiI GGNNCC 1 cut(s) 672
BmrFI CCNGG 6 cut(s) 8, 349, 668, 755, 798, 1160
BmrI ACTGGG 1 cut(s) 1261
BmsI GCATC 1 cut(s) 79
BmuI ACTGGG 1 cut(s) 1261
BpmI CTGGAG 4 cut(s) 56, 737, 819, 975
Bpu1102I GCTNAGC 1 cut(s) 1268
BpuEI CTTGAG 1 cut(s) 474
BpuMI CCSGG 2 cut(s) 668, 1160
BsaHI GRCGYC 1 cut(s) 1245
BsaJI CCNNGG 6 cut(s) 7, 222, 283, 347, 348, 357
BsaWI WCCGGW 2 cut(s) 240, 598
BsaXI ACNNNNNCTCC 2 cut(s) 792, 822
Bsc4I CCNNNNNNNGG 4 cut(s) 667, 1134, 1158, 1202
Bse118I RCCGGY 1 cut(s) 1114
Bse1I ACTGG 3 cut(s) 185, 992, 1256
Bse3DI GCAATG 2 cut(s) 569, 1027
BseAI TCCGGA 1 cut(s) 240
BseBI CCWGG 4 cut(s) 8, 349, 755, 798
BseDI CCNNGG 6 cut(s) 7, 222, 283, 347, 348, 357
BseGI GGATG 1 cut(s) 1143
BseLI CCNNNNNNNGG 4 cut(s) 667, 1134, 1158, 1202
BseMI GCAATG 2 cut(s) 569, 1027
BseMII CTCAG 4 cut(s) 285, 354, 570, 1101
BseNI ACTGG 3 cut(s) 185, 992, 1256
BseRI GAGGAG 3 cut(s) 323, 644, 1218
BseX3I CGGCCG 1 cut(s) 1116
BseXI GCAGC 3 cut(s) 52, 423, 844
BsgI GTGCAG 1 cut(s) 645
Bsh1285I CGRYCG 1 cut(s) 1119
BshFI GGCC 7 cut(s) 50, 171, 248, 356, 958, 1118, 1256
BsiEI CGRYCG 1 cut(s) 1119
BsiHKAI GWGCWC 1 cut(s) 805
BsiSI CCGG 6 cut(s) 93, 241, 599, 668, 1115, 1159
BslFI GGGAC 2 cut(s) 92, 461
BslI CCNNNNNNNGG 4 cut(s) 667, 1134, 1158, 1202
BsmFI GGGAC 2 cut(s) 92, 461
BsnI GGCC 7 cut(s) 50, 171, 248, 356, 958, 1118, 1256
Bsp1286I GDGCHC 2 cut(s) 84, 805
Bsp13I TCCGGA 1 cut(s) 240
Bsp143I GATC 9 cut(s) 28, 136, 193, 215, 228, 484, 601, 706, 1093
Bsp1720I GCTNAGC 1 cut(s) 1268
Bsp19I CCATGG 1 cut(s) 283
BspACI CCGC 3 cut(s) 147, 249, 1215
BspANI GGCC 7 cut(s) 50, 171, 248, 356, 958, 1118, 1256
BspCNI CTCAG 4 cut(s) 286, 355, 571, 1102
BspEI TCCGGA 1 cut(s) 240
BspHI TCATGA 1 cut(s) 337
BspLI GGNNCC 1 cut(s) 672
BspPI GGATC 5 cut(s) 131, 479, 609, 701, 1088
BsrBI CCGCTC 1 cut(s) 149
BsrDI GCAATG 2 cut(s) 569, 1027
BsrFI RCCGGY 1 cut(s) 1114
BsrI ACTGG 3 cut(s) 185, 992, 1256
BssAI RCCGGY 1 cut(s) 1114
BssECI CCNNGG 6 cut(s) 7, 222, 283, 347, 348, 357
BssMI GATC 9 cut(s) 28, 136, 193, 215, 228, 484, 601, 706, 1093
BssNI GRCGYC 1 cut(s) 1245
BssT1I CCWWGG 2 cut(s) 283, 357
Bst2UI CCWGG 4 cut(s) 8, 349, 755, 798
Bst4CI ACNGT 1 cut(s) 1190
Bst6I CTCTTC 1 cut(s) 946
BstACI GRCGYC 1 cut(s) 1245
BstC8I GCNNGC 3 cut(s) 384, 540, 1116
BstDEI CTNAG 6 cut(s) 294, 363, 534, 579, 1110, 1268
BstDSI CCRYGG 1 cut(s) 283
BstENI CCTNNNNNAGG 1 cut(s) 1200
BstF5I GGATG 1 cut(s) 1143
BstH2I RGCGCY 2 cut(s) 587, 1128
BstHHI GCGC 2 cut(s) 586, 1127
BstKTI GATC 9 cut(s) 31, 139, 196, 218, 231, 487, 604, 709, 1096
BstMBI GATC 9 cut(s) 28, 136, 193, 215, 228, 484, 601, 706, 1093
BstMCI CGRYCG 1 cut(s) 1119
BstMWI GCNNNNNNNGC 1 cut(s) 1124
BstNI CCWGG 4 cut(s) 8, 349, 755, 798
BstNSI RCATGY 2 cut(s) 542, 638
BstSCI CCNGG 6 cut(s) 6, 347, 666, 753, 796, 1158
BstV1I GCAGC 3 cut(s) 52, 423, 844
BstX2I RGATCY 3 cut(s) 136, 215, 706
BstXI CCANNNNNNTGG 1 cut(s) 746
BstYI RGATCY 3 cut(s) 136, 215, 706
BstZI CGGCCG 1 cut(s) 1116
BsuI GTATCC 1 cut(s) 282
BsuRI GGCC 7 cut(s) 50, 171, 248, 356, 958, 1118, 1256
BtgI CCRYGG 1 cut(s) 283
BtgZI GCGATG 1 cut(s) 1075
BtsCI GGATG 1 cut(s) 1143
BtsI GCAGTG 1 cut(s) 464
BtsIMutI CAGTG 2 cut(s) 192, 464
Cac8I GCNNGC 3 cut(s) 384, 540, 1116
CaiI CAGNNNCTG 1 cut(s) 710
CciI TCATGA 1 cut(s) 337
CfoI GCGC 2 cut(s) 586, 1127
Cfr10I RCCGGY 1 cut(s) 1114
Cfr13I GGNCC 5 cut(s) 4, 246, 893, 956, 1254
CseI GACGC 2 cut(s) 850, 1234
Csp6I GTAC 6 cut(s) 367, 400, 690, 763, 794, 1191
CviAII CATG 9 cut(s) 284, 329, 338, 539, 616, 635, 663, 791, 1098
CviQI GTAC 6 cut(s) 367, 400, 690, 763, 794, 1191
DdeI CTNAG 6 cut(s) 294, 363, 534, 579, 1110, 1268
DpnI GATC 9 cut(s) 30, 138, 195, 217, 230, 486, 603, 708, 1095
DpnII GATC 9 cut(s) 28, 136, 193, 215, 228, 484, 601, 706, 1093
EaeI YGGCCR 2 cut(s) 169, 1116
EagI CGGCCG 1 cut(s) 1116
Eam1104I CTCTTC 1 cut(s) 946
EarI CTCTTC 1 cut(s) 946
Ecl136II GAGCTC 1 cut(s) 803
EclXI CGGCCG 1 cut(s) 1116
Eco130I CCWWGG 2 cut(s) 283, 357
Eco147I AGGCCT 1 cut(s) 50
Eco24I GRGCYC 2 cut(s) 84, 805
Eco32I GATATC 1 cut(s) 165
Eco47I GGWCC 2 cut(s) 4, 893
Eco52I CGGCCG 1 cut(s) 1116
Eco53kI GAGCTC 1 cut(s) 803
Eco57I CTGAAG 1 cut(s) 65
EcoICRI GAGCTC 1 cut(s) 803
EcoNI CCTNNNNNAGG 1 cut(s) 1200
EcoO109I RGGNCCY 1 cut(s) 893
EcoRII CCWGG 4 cut(s) 6, 347, 753, 796
EcoRV GATATC 1 cut(s) 165
EcoT14I CCWWGG 2 cut(s) 283, 357
EcoT38I GRGCYC 2 cut(s) 84, 805
ErhI CCWWGG 2 cut(s) 283, 357
FaeI CATG 9 cut(s) 287, 332, 341, 542, 619, 638, 666, 794, 1101
FaqI GGGAC 2 cut(s) 92, 461
FatI CATG 9 cut(s) 283, 328, 337, 538, 615, 634, 662, 790, 1097
FblI GTMKAC 1 cut(s) 1248
Fnu4HI GCNGC 5 cut(s) 41, 249, 412, 833, 1216
FokI GGATG 1 cut(s) 1150
FriOI GRGCYC 2 cut(s) 84, 805
Fsp4HI GCNGC 5 cut(s) 41, 249, 412, 833, 1216
FspBI CTAG 4 cut(s) 680, 897, 932, 1273
GlaI GCGC 2 cut(s) 585, 1126
GluI GCNGC 5 cut(s) 41, 249, 412, 833, 1216
GsuI CTGGAG 4 cut(s) 56, 737, 819, 975
HaeII RGCGCY 2 cut(s) 587, 1128
HaeIII GGCC 7 cut(s) 50, 171, 248, 356, 958, 1118, 1256
HapII CCGG 6 cut(s) 93, 241, 599, 668, 1115, 1159
HgaI GACGC 2 cut(s) 850, 1234
HhaI GCGC 2 cut(s) 586, 1127
Hin1I GRCGYC 1 cut(s) 1245
Hin1II CATG 9 cut(s) 287, 332, 341, 542, 619, 638, 666, 794, 1101
Hin6I GCGC 2 cut(s) 584, 1125
HinP1I GCGC 2 cut(s) 584, 1125
HincII GTYRAC 2 cut(s) 972, 1249
HindII GTYRAC 2 cut(s) 972, 1249
HinfI GANTC 5 cut(s) 59, 96, 640, 750, 1206
HpaII CCGG 6 cut(s) 93, 241, 599, 668, 1115, 1159
HphI GGTGA 6 cut(s) 91, 238, 289, 596, 823, 1148
Hpy166II GTNNAC 7 cut(s) 280, 749, 814, 972, 997, 1193, 1249
Hpy188I TCNGA 5 cut(s) 580, 720, 923, 979, 1264
Hpy188III TCNNGA 8 cut(s) 35, 241, 338, 491, 710, 734, 945, 1088
Hpy8I GTNNAC 7 cut(s) 280, 749, 814, 972, 997, 1193, 1249
Hpy99I CGWCG 5 cut(s) 59, 89, 1071, 1074, 1250
HpyAV CCTTC 5 cut(s) 40, 61, 203, 884, 1205
HpyCH4III ACNGT 1 cut(s) 1190
HpyCH4IV ACGT 1 cut(s) 393
HpyCH4V TGCA 6 cut(s) 386, 457, 510, 569, 626, 832
HpyF10VI GCNNNNNNNGC 1 cut(s) 1124
HpyF3I CTNAG 6 cut(s) 294, 363, 534, 579, 1110, 1268
HpySE526I ACGT 1 cut(s) 393
Hsp92I GRCGYC 1 cut(s) 1245
Hsp92II CATG 9 cut(s) 287, 332, 341, 542, 619, 638, 666, 794, 1101
HspAI GCGC 2 cut(s) 584, 1125
Kpn2I TCCGGA 1 cut(s) 240
KroI GCCGGC 1 cut(s) 1114
KroNI GCCGGC 1 cut(s) 1116
Kzo9I GATC 9 cut(s) 28, 136, 193, 215, 228, 484, 601, 706, 1093
LmnI GCTCC 8 cut(s) 37, 154, 379, 419, 631, 800, 1231, 1264
Lsp1109I GCAGC 3 cut(s) 52, 423, 844
LweI GCATC 1 cut(s) 79
MaeI CTAG 4 cut(s) 680, 897, 932, 1273
MaeII ACGT 1 cut(s) 393
MaeIII GTNAC 2 cut(s) 461, 470
MalI GATC 9 cut(s) 30, 138, 195, 217, 230, 486, 603, 708, 1095
MbiI CCGCTC 1 cut(s) 149
MboI GATC 9 cut(s) 28, 136, 193, 215, 228, 484, 601, 706, 1093
MboII GAAGA 3 cut(s) 225, 933, 992
MflI RGATCY 3 cut(s) 136, 215, 706
MhlI GDGCHC 2 cut(s) 84, 805
MlsI TGGCCA 1 cut(s) 171
MluCI AATT 7 cut(s) 495, 519, 548, 741, 900, 1167, 1220
MluNI TGGCCA 1 cut(s) 171
MlyI GAGTC 2 cut(s) 744, 1215
MmeI TCCRAC 1 cut(s) 1242
Mox20I TGGCCA 1 cut(s) 171
MroI TCCGGA 1 cut(s) 240
MroNI GCCGGC 1 cut(s) 1114
MroXI GAANNNNTTC 1 cut(s) 50
MscI TGGCCA 1 cut(s) 171
MseI TTAA 3 cut(s) 75, 594, 645
MslI CAYNNNNRTG 1 cut(s) 1136
Msp20I TGGCCA 1 cut(s) 171
MspA1I CMGCKG 1 cut(s) 43
MspI CCGG 6 cut(s) 93, 241, 599, 668, 1115, 1159
MspR9I CCNGG 6 cut(s) 8, 349, 668, 755, 798, 1160
MvaI CCWGG 4 cut(s) 8, 349, 755, 798
MwoI GCNNNNNNNGC 1 cut(s) 1124
NaeI GCCGGC 1 cut(s) 1116
NciI CCSGG 2 cut(s) 668, 1160
NcoI CCATGG 1 cut(s) 283
NdeII GATC 9 cut(s) 28, 136, 193, 215, 228, 484, 601, 706, 1093
NgoMIV GCCGGC 1 cut(s) 1114
NlaIII CATG 9 cut(s) 287, 332, 341, 542, 619, 638, 666, 794, 1101
NlaIV GGNNCC 1 cut(s) 672
NmeAIII GCCGAG 1 cut(s) 247
NmuCI GTSAC 1 cut(s) 470
NspI RCATGY 2 cut(s) 542, 638
PaeI GCATGC 1 cut(s) 542
PagI TCATGA 1 cut(s) 337
PasI CCCWGGG 1 cut(s) 348
PceI AGGCCT 1 cut(s) 50
PcsI WCGNNNNNNNCGW 2 cut(s) 480, 1215
PdiI GCCGGC 1 cut(s) 1116
PdmI GAANNNNTTC 1 cut(s) 50
PfeI GAWTC 3 cut(s) 59, 96, 640
PflFI GACNNNGTC 1 cut(s) 236
PkrI GCNGC 5 cut(s) 42, 250, 413, 834, 1217
PleI GAGTC 2 cut(s) 744, 1214
PpsI GAGTC 2 cut(s) 744, 1214
PpuMI RGGWCCY 1 cut(s) 893
Psp124BI GAGCTC 1 cut(s) 805
Psp5II RGGWCCY 1 cut(s) 893
Psp6I CCWGG 4 cut(s) 6, 347, 753, 796
PspGI CCWGG 4 cut(s) 6, 347, 753, 796
PspN4I GGNNCC 1 cut(s) 672
PspPI GGNCC 5 cut(s) 4, 246, 893, 956, 1254
PspPPI RGGWCCY 1 cut(s) 893
PsrI GAACNNNNNNTAC 2 cut(s) 383, 415
PstNI CAGNNNCTG 1 cut(s) 710
PsuI RGATCY 3 cut(s) 136, 215, 706
PsyI GACNNNGTC 1 cut(s) 236
PvuII CAGCTG 1 cut(s) 43
RsaI GTAC 6 cut(s) 368, 401, 691, 764, 795, 1192
RsaNI GTAC 6 cut(s) 367, 400, 690, 763, 794, 1191
RseI CAYNNNNRTG 1 cut(s) 1136
SacI GAGCTC 1 cut(s) 805
SalI GTCGAC 1 cut(s) 1247
SaqAI TTAA 3 cut(s) 75, 594, 645
SatI GCNGC 5 cut(s) 41, 249, 412, 833, 1216
Sau3AI GATC 9 cut(s) 28, 136, 193, 215, 228, 484, 601, 706, 1093
Sau96I GGNCC 5 cut(s) 4, 246, 893, 956, 1254
ScaI AGTACT 2 cut(s) 368, 401
SchI GAGTC 2 cut(s) 744, 1215
ScrFI CCNGG 6 cut(s) 8, 349, 668, 755, 798, 1160
SduI GDGCHC 2 cut(s) 84, 805
SfaNI GCATC 1 cut(s) 79
SinI GGWCC 2 cut(s) 4, 893
SmiMI CAYNNNNRTG 1 cut(s) 1136
SmlI CTYRAG 1 cut(s) 489
SmoI CTYRAG 1 cut(s) 489
SphI GCATGC 1 cut(s) 542
Sse9I AATT 7 cut(s) 495, 519, 548, 741, 900, 1167, 1220
SseBI AGGCCT 1 cut(s) 50
SsiI CCGC 3 cut(s) 147, 249, 1215
SspMI CTAG 4 cut(s) 680, 897, 932, 1273
SstI GAGCTC 1 cut(s) 805
StuI AGGCCT 1 cut(s) 50
StyD4I CCNGG 6 cut(s) 6, 347, 666, 753, 796, 1158
StyI CCWWGG 2 cut(s) 283, 357
TaaI ACNGT 1 cut(s) 1190
TaiI ACGT 1 cut(s) 396
TaqI TCGA 7 cut(s) 54, 87, 231, 483, 696, 1209, 1248
TasI AATT 7 cut(s) 495, 519, 548, 741, 900, 1167, 1220
TatI WGTACW 2 cut(s) 366, 399
TauI GCSGC 2 cut(s) 251, 1218
TfiI GAWTC 3 cut(s) 59, 96, 640
Tru1I TTAA 3 cut(s) 75, 594, 645
Tru9I TTAA 3 cut(s) 75, 594, 645
TscAI CASTG 2 cut(s) 192, 464
TseFI GTSAC 1 cut(s) 470
TseI GCWGC 3 cut(s) 40, 411, 832
Tsp45I GTSAC 1 cut(s) 470
TspDTI ATGAA 4 cut(s) 222, 326, 844, 1028
TspGWI ACGGA 1 cut(s) 113
TspRI CASTG 2 cut(s) 192, 464
Tth111I GACNNNGTC 1 cut(s) 236
VpaK11BI GGWCC 2 cut(s) 4, 893
XagI CCTNNNNNAGG 1 cut(s) 1200
XapI RAATTY 2 cut(s) 495, 900
XceI RCATGY 2 cut(s) 542, 638
XmiI GTMKAC 1 cut(s) 1248
XmnI GAANNNNTTC 1 cut(s) 50
XspI CTAG 4 cut(s) 680, 897, 932, 1273
ZrmI AGTACT 2 cut(s) 368, 401
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.