Rroxscaffold_2G00120130

Belongs to the iron ascorbate-dependent oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000054
Physical Location & Seq
Reverse (-)
52207569 .. 52222381
14813 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00120130.1

Sequence Viewer

Length: 1134 bp
ATGGTAAATGGCCAAAAATTATGGCTGTGTGGAACTGAGTTCGGCCTTTGTTTTGGGCAATCTTCTCTTTTGAATTCAAGTCATCGAGAGATTCAGAGGTTCATATCAAAGAAGGAAAGGTCTACTTGTACTTGTACGTGTCAAAGTCACATTACATGCACACCGCACCGAAACCACGTGGATTTGCGTGTCCAAAGCCTCGAGCGAATTAAGAAGAAACGGATCCTCATTTCTGAACGTACTCTTCGTATCCCGGTGGTGGATCTGGCTGAATATAACGGAAGGCGTGCTGAGGTGATCGACCAAGTCCGGAGGGCCTCGGAGAGCTGTGGCTTCTTCCAGGTGGTGAACCATGGGATACCCAAGAGAGTGATGGAGGAGATGTTGCAGGCGGCGCGTGTGTTTCACGAACTGCCGAGGGAGGAGAAGGCGGAGTACTATAGTAGGGAGATGGGGATGAAGGTCAAGTACTACTCTAGCAGTACCATGTATGATTTGATGTTTGCTGATTGGAAGGACACTTTGCAGTGTATCATAACTGACGAGCAGTTTGATCCTCAAGAAATTCCTCTCGTTTGCAGAGAGATAACTATGGAGTACTCTAAGCACGTTCACAAATTAGGTGTCACTTTGTTTGAATTTATATCTGAGGCGCTTGGGCTCAAACCTAATCACCTCAAAAACTTGGATATCACAAAGAGGCATATGATTCTTAGTCATTACTATCCACCATGCCCAGAGCCTGAAGTGGCTATTGGCACTGCTGAACACTCGGATCCTAATTTTATGACCATCCTACTTCAAGATCAAATTGGTGGACTTCAAGTTTTGTACCAAAATCAGTGGATTGATGTTCTTCCTGTACCTGGAGCTCTAGTGCTAATCTCAAACAATAAGTTCATAAGCGTCATTCACAGAGTATTGGCTAAAAATGAAGGTCCAAGAATTTCTGTGGCGTGTTTTTTCAGACCTTCACTAGAAAACTCCTCAAGATTATATGGGCCAATCAAGGAGTTAACATCAGAAGAAAAACCTCCAATTTATCAGGAAACAACAGTGAAAGATTATGTTATGTGCCACTACAAGAAATGGGAACTAGATGAGGTCTCCGGGCTAGAAGACTTGAAACTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2OG-FeII_Oxy DIOX_N

Protein Analysis

377

Amino Acids

43.64

Weight (kDa)

6.92

Isoelectric Point (pI)

52.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 84 - 186 1.9e-21 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 235 - 324 2.4e-23 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000054)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03400 AT1G03400 AT1G03410 AT1G03410 AT1G04350 AT1G06620 AT1G06620 AT1G06640 AT1G06640 AT1G06640 AT1G06645 AT1G06650 AT1G06650 AT2G25450 AT2G30830 AT2G30840 AT2G30840 AT2G30840 AT3G61400 AT3G61400 AT5G43440 AT5G43440 AT5G43450 AT5G43450 AT5G59530 AT5G59540 AT5G59540
fragaria_vesca FvH4_2g03190 FvH4_2g03220 FvH4_3g07861 FvH4_3g31880 FvH4_3g31880 FvH4_3g31880 FvH4_4g03241 FvH4_4g03250 FvH4_4g03251 FvH4_4g03260 FvH4_4g03300 FvH4_4g03301 FvH4_4g03301 FvH4_4g03301 FvH4_4g03302 FvH4_4g03303 FvH4_4g03303 FvH4_4g03304 FvH4_4g03305 FvH4_4g03323 FvH4_4g03323 FvH4_5g19290 FvH4_5g19290 FvH4_5g19290 FvH4_5g19291 FvH4_5g19291 FvH4_5g19310 FvH4_5g19310 FvH4_5g19310 FvH4_5g19320 FvH4_5g19321 FvH4_5g19321 FvH4_5g19321 FvH4_7g31470
malus_domestica MD00G1220300.v1.1 MD02G1050800.v1.1 MD02G1053200.v1.1 MD02G1053300.v1.1 MD02G1054900.v1.1 MD03G1032300.v1.1 MD03G1245000.v1.1 MD03G1245300.v1.1 MD05G1014200.v1.1 MD13G1210900.v1.1 MD13G1211000.v1.1 MD13G1211100.v1.1 MD13G1211200.v1.1 MD13G1211800.v1.1 MD13G1211900.v1.1 MD13G1212000.v1.1 MD16G1214100.v1.1 MD16G1214300.v1.1 MD16G1214400.v1.1 MD16G1214600.v1.1 MD16G1215000.v1.1 MD16G1215200.v1.1 MD16G1215300.v1.1 MD16G1215500.v1.1 MD16G1271000.v1.1
prunus_persica Prupe.1G035500_v2.0.a1 Prupe.1G035700_v2.0.a1 Prupe.1G035800_v2.0.a1 Prupe.1G035900_v2.0.a1 Prupe.1G036000_v2.0.a1 Prupe.1G036100_v2.0.a1 Prupe.1G036200_v2.0.a1 Prupe.1G036400_v2.0.a1 Prupe.1G036500_v2.0.a1 Prupe.1G036600_v2.0.a1 Prupe.1G036700_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G191000_v2.0.a1 Prupe.1G191100_v2.0.a1
pyrus_communis pycom13g18340 pycom13g18350 pycom13g18380 pycom16g17990 pycom16g18010 pycom16g18020
rosa_chinensis RchiOBHm_Chr2g0124051 RchiOBHm_Chr4g0391811 RchiOBHm_Chr4g0391931 RchiOBHm_Chr4g0391961 RchiOBHm_Chr4g0391971 RchiOBHm_Chr4g0391981 RchiOBHm_Chr4g0391991 RchiOBHm_Chr4g0392031 RchiOBHm_Chr4g0392051 RchiOBHm_Chr4g0392061 RchiOBHm_Chr4g0392071 RchiOBHm_Chr4g0392081 RchiOBHm_Chr4g0392091 RchiOBHm_Chr4g0392111 RchiOBHm_Chr4g0392121 RchiOBHm_Chr4g0392131 RchiOBHm_Chr4g0392141 RchiOBHm_Chr4g0392151 RchiOBHm_Chr4g0392211 RchiOBHm_Chr4g0392251 RchiOBHm_Chr4g0392261 RchiOBHm_Chr4g0392301 RchiOBHm_Chr4g0392311 RchiOBHm_Chr4g0392341 RchiOBHm_Chr4g0409221 RchiOBHm_Chr4g0410991 RchiOBHm_Chr4g0429131 RchiOBHm_Chr4g0437051 RchiOBHm_Chr5g0038681 RchiOBHm_Chr5g0047071 RchiOBHm_Chr5g0058651 RchiOBHm_Chr6g0248121 RchiOBHm_Chr6g0248141 RchiOBHm_Chr6g0248291 RchiOBHm_Chr6g0248341 RchiOBHm_Chr6g0248351
rosa_laevigata RLG00000006473 RLG00000006475 RLG00000006667 RLG00000007095 RLG00000009819 RLG00000009820 RLG00000009821 RLG00000009822 RLG00000009825 RLG00000009826 RLG00000009830 RLG00000009831 RLG00000009832 RLG00000009833 RLG00000009834 RLG00000009835 RLG00000009837 RLG00000009838 RLG00000009839 RLG00000009841 RLG00000009842 RLG00000009844 RLG00000009845 RLG00000009846 RLG00000009847 RLG00000009848 RLG00000009849 RLG00000015160 RLG00000015161 RLG00000017791 RLG00000018779 RLG00000034461 RLG00000035237
rosa_multiflora Rmu_co8253791.1_g000001 Rmu_co8348827.1_g000001 Rmu_co8400489.1_g000001 Rmu_sc0000383.1_g000003 Rmu_sc0000383.1_g000005 Rmu_sc0000383.1_g000026 Rmu_sc0000846.1_g000012 Rmu_sc0001231.1_g000013 Rmu_sc0001231.1_g000026 Rmu_sc0001231.1_g000028 Rmu_sc0001800.1_g000027 Rmu_sc0003436.1_g000022 Rmu_sc0004104.1_g000004 Rmu_sc0004295.1_g000021 Rmu_sc0004295.1_g000031 Rmu_sc0004928.1_g000002 Rmu_sc0004928.1_g000008 Rmu_sc0004928.1_g000011 Rmu_sc0004928.1_g000027 Rmu_sc0004977.1_g000007 Rmu_sc0005018.1_g000002 Rmu_sc0005091.1_g000026 Rmu_sc0005091.1_g000032 Rmu_sc0005091.1_g000033 Rmu_sc0005817.1_g000003 Rmu_sc0005817.1_g000008 Rmu_sc0012482.1_g000002 Rmu_sc0014210.1_g000001 Rmu_sc0016150.1_g000001 Rmu_sc0029701.1_g000002 Rmu_sc0036585.1_g000001 Rmu_sc0037489.1_g000002
rosa_roxburghii Rroxscaffold_1G00021790 Rroxscaffold_1G00021800 Rroxscaffold_1G00034360 Rroxscaffold_2G00120130 Rroxscaffold_5G00337210 Rroxscaffold_5G00337220 Rroxscaffold_5G00337230 Rroxscaffold_5G00337250 Rroxscaffold_5G00337260 Rroxscaffold_5G00337270 Rroxscaffold_5G00337300 Rroxscaffold_5G00337310 Rroxscaffold_5G00337320 Rroxscaffold_5G00337330 Rroxscaffold_5G00337350 Rroxscaffold_5G00337370 Rroxscaffold_5G00337390 Rroxscaffold_5G00337400 Rroxscaffold_5G00337420 Rroxscaffold_5G00337430 Rroxscaffold_5G00337450 Rroxscaffold_5G00337470 Rroxscaffold_5G00337480 Rroxscaffold_5G00337520 Rroxscaffold_5G00378130 Rroxscaffold_6G00397800 Rroxscaffold_7G00213320 Rroxscaffold_7G00213390 Rroxscaffold_7G00213420 Rroxscaffold_7G00213470
rosa_rugosa Rorug02G0070100 Rorug02G0070100 Rorug02G0070100 Rorug02G0128600 Rorug02G0128700 Rorug02G0128800 Rorug02G0128900 Rorug02G0248400 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337100 Rorug03G0337200 Rorug03G0337300 Rorug03G0337600 Rorug03G0337700 Rorug03G0337800 Rorug03G0337900 Rorug03G0337900 Rorug03G0338000 Rorug03G0338100 Rorug03G0338200 Rorug04G0233200.1 Rorug04G0297900 Rorug05G0233700 Rorug05G0316700 Rorug05G0530800 Rorug05G0530900
rosa_samantha Rh2AG307400 Rh2BG316500 Rh2DG331200 Rh4AG039300 Rh4AG039400 Rh4AG039600 Rh4AG039700 Rh4AG039900 Rh4AG040000 Rh4AG040100 Rh4AG040300 Rh4AG040500 Rh4AG040700 Rh4AG041000 Rh4AG041100 Rh4AG041600 Rh4AG041800 Rh4AG041900 Rh4AG352400 Rh4BG033200 Rh4BG034100 Rh4BG034300 Rh4BG034700 Rh4BG034800 Rh4BG035200 Rh4BG035400 Rh4BG036000 Rh4BG036200 Rh4BG036300 Rh4BG036500 Rh4BG036800 Rh4BG361700 Rh4CG042000 Rh4CG042200 Rh4CG042300 Rh4CG042500 Rh4CG042600 Rh4CG042800 Rh4CG043200 Rh4CG043400 Rh4CG043500 Rh4CG043700 Rh4CG043800 Rh4CG044200 Rh4CG044500 Rh4CG044700 Rh4CG177000 Rh4CG310600 Rh4CG376000 Rh4DG036300 Rh4DG036900 Rh4DG037000 Rh4DG037100 Rh4DG037200 Rh4DG037300 Rh4DG037500 Rh4DG037700 Rh4DG037800 Rh4DG037900 Rh4DG038000 Rh4DG038200 Rh4DG038500 Rh4DG038700 Rh4DG038900 Rh4DG159600 Rh5CG347900 Rh5DG409900 Rh6AG045300 Rh6AG045800 Rh6AG046000 Rh6AG046100 Rh6BG040600 Rh6BG040700 Rh6BG042200 Rh6BG042700 Rh6BG042800 Rh6DG035900 Rh6DG036100 Rh6DG036200
rosa_wichuraiana Rw0G010420 Rw2G024780 Rw4G003020 Rw4G003070 Rw4G003080 Rw4G003090 Rw4G003100 Rw4G003130 Rw4G003140 Rw4G003150 Rw4G003180 Rw4G003190 Rw4G003200 Rw4G003210 Rw4G003220 Rw4G003240 Rw4G003270 Rw4G025050 Rw4G030850 Rw6G003930 Rw6G004000 Rw6G004030 Rw6G004040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 122
AccII CGCG 1 cut(s) 397
AccIII TCCGGA 1 cut(s) 309
AciI CCGC 3 cut(s) 164, 392, 431
AclWI GGATC 6 cut(s) 217, 230, 270, 548, 770, 783
AcoI YGGCCR 1 cut(s) 10
AcsI RAATTY 4 cut(s) 73, 564, 638, 945
AcuI CTGAAG 1 cut(s) 765
AcvI CACGTG 1 cut(s) 178
AfaI GTAC 9 cut(s) 130, 136, 241, 437, 470, 484, 599, 833, 864
AfiI CCNNNNNNNGG 2 cut(s) 259, 866
AflIII ACRYGT 1 cut(s) 137
AgsI TTSAA 6 cut(s) 73, 78, 638, 803, 824, 1126
AjnI CCWGG 2 cut(s) 339, 865
AjuI GAANNNNNNNTTGG 2 cut(s) 738, 770
AluBI AGCT 2 cut(s) 327, 872
AluI AGCT 2 cut(s) 327, 872
Alw21I GWGCWC 1 cut(s) 874
Alw26I GTCTC 1 cut(s) 1111
AlwI GGATC 6 cut(s) 217, 230, 270, 548, 770, 783
AlwNI CAGNNNCTG 1 cut(s) 743
Ama87I CYCGRG 1 cut(s) 200
Aor13HI TCCGGA 1 cut(s) 309
AoxI GGCC 4 cut(s) 10, 43, 315, 1001
ApoI RAATTY 4 cut(s) 73, 564, 638, 945
ArsI GACNNNNNNTTYG 4 cut(s) 533, 565, 609, 641
AspLEI GCGC 2 cut(s) 397, 655
AspS9I GGNCC 3 cut(s) 315, 938, 1001
AsuC2I CCSGG 2 cut(s) 254, 1111
AsuHPI GGTGA 3 cut(s) 307, 358, 665
AvaI CYCGRG 1 cut(s) 200
AvaII GGWCC 1 cut(s) 938
BalI TGGCCA 1 cut(s) 12
BamHI GGATCC 2 cut(s) 222, 775
BanII GRGCYC 2 cut(s) 663, 874
BarI GAAGNNNNNNTAC 4 cut(s) 419, 451, 452, 484
BbrPI CACGTG 1 cut(s) 178
BbsI GAAGAC 1 cut(s) 1125
Bbv12I GWGCWC 1 cut(s) 874
BbvCI CCTCAGC 1 cut(s) 291
BccI CCATC 3 cut(s) 367, 445, 800
BciT130I CCWGG 2 cut(s) 341, 867
BciVI GTATCC 2 cut(s) 260, 351
BcnI CCSGG 2 cut(s) 254, 1111
BcoDI GTCTC 1 cut(s) 1111
BfaI CTAG 5 cut(s) 477, 875, 977, 1097, 1115
BfmI CTRYAG 1 cut(s) 439
BfoI RGCGCY 1 cut(s) 656
BfuI GTATCC 2 cut(s) 260, 351
BisI GCNGC 1 cut(s) 393
BlsI GCNGC 1 cut(s) 394
BmcAI AGTACT 3 cut(s) 437, 470, 599
Bme1390I CCNGG 4 cut(s) 254, 341, 867, 1111
Bme18I GGWCC 1 cut(s) 938
BmeT110I CYCGRG 1 cut(s) 200
BmgT120I GGNCC 3 cut(s) 315, 938, 1001
BmiI GGNNCC 2 cut(s) 224, 777
BmrFI CCNGG 4 cut(s) 254, 341, 867, 1111
BpiI GAAGAC 1 cut(s) 1125
BpmI CTGGAG 1 cut(s) 888
Bpu10I CCTNAGC 1 cut(s) 291
BpuEI CTTGAG 2 cut(s) 543, 973
BpuMI CCSGG 2 cut(s) 254, 1111
BsaAI YACGTR 2 cut(s) 138, 178
BsaI GGTCTC 1 cut(s) 1111
BsaJI CCNNGG 3 cut(s) 318, 352, 416
BsaWI WCCGGW 1 cut(s) 309
BsaXI ACNNNNNCTCC 4 cut(s) 368, 398, 861, 891
Bsc4I CCNNNNNNNGG 2 cut(s) 259, 866
BseAI TCCGGA 1 cut(s) 309
BseBI CCWGG 2 cut(s) 341, 867
BseDI CCNNGG 3 cut(s) 318, 352, 416
BseGI GGATG 2 cut(s) 462, 792
BseLI CCNNNNNNNGG 2 cut(s) 259, 866
BseMII CTCAG 3 cut(s) 27, 282, 639
BseRI GAGGAG 3 cut(s) 392, 437, 976
Bsh1236I CGCG 1 cut(s) 397
BshFI GGCC 4 cut(s) 12, 45, 317, 1003
BsiHKAI GWGCWC 1 cut(s) 874
BsiHKCI CYCGRG 1 cut(s) 200
BsiSI CCGG 3 cut(s) 254, 310, 1110
BslI CCNNNNNNNGG 2 cut(s) 259, 866
BsmAI GTCTC 1 cut(s) 1111
BsnI GGCC 4 cut(s) 12, 45, 317, 1003
Bso31I GGTCTC 1 cut(s) 1111
BsoBI CYCGRG 1 cut(s) 200
Bsp1286I GDGCHC 2 cut(s) 663, 874
Bsp13I TCCGGA 1 cut(s) 309
Bsp143I GATC 6 cut(s) 222, 262, 297, 553, 775, 805
Bsp19I CCATGG 1 cut(s) 352
BspACI CCGC 3 cut(s) 164, 392, 431
BspANI GGCC 4 cut(s) 12, 45, 317, 1003
BspCNI CTCAG 3 cut(s) 28, 283, 640
BspEI TCCGGA 1 cut(s) 309
BspFNI CGCG 1 cut(s) 397
BspLI GGNNCC 2 cut(s) 224, 777
BspPI GGATC 6 cut(s) 217, 230, 270, 548, 770, 783
BspTNI GGTCTC 1 cut(s) 1111
BssECI CCNNGG 3 cut(s) 318, 352, 416
BssMI GATC 6 cut(s) 222, 262, 297, 553, 775, 805
BssT1I CCWWGG 1 cut(s) 352
Bst2UI CCWGG 2 cut(s) 341, 867
Bst4CI ACNGT 2 cut(s) 1057, 1131
Bst6I CTCTTC 1 cut(s) 249
BstBAI YACGTR 2 cut(s) 138, 178
BstC8I GCNNGC 2 cut(s) 288, 390
BstDEI CTNAG 5 cut(s) 36, 291, 603, 648, 713
BstDSI CCRYGG 1 cut(s) 352
BstF5I GGATG 2 cut(s) 462, 792
BstFNI CGCG 1 cut(s) 397
BstH2I RGCGCY 1 cut(s) 656
BstHHI GCGC 2 cut(s) 397, 655
BstKTI GATC 6 cut(s) 225, 265, 300, 556, 778, 808
BstMAI GTCTC 1 cut(s) 1111
BstMBI GATC 6 cut(s) 222, 262, 297, 553, 775, 805
BstMWI GCNNNNNNNGC 1 cut(s) 394
BstNI CCWGG 2 cut(s) 341, 867
BstNSI RCATGY 1 cut(s) 159
BstSCI CCNGG 4 cut(s) 252, 339, 865, 1109
BstSFI CTRYAG 1 cut(s) 439
BstUI CGCG 1 cut(s) 397
BstV2I GAAGAC 1 cut(s) 1125
BstX2I RGATCY 3 cut(s) 222, 262, 775
BstYI RGATCY 3 cut(s) 222, 262, 775
BsuI GTATCC 2 cut(s) 260, 351
BsuRI GGCC 4 cut(s) 12, 45, 317, 1003
BtgI CCRYGG 1 cut(s) 352
BtsCI GGATG 2 cut(s) 462, 792
BtsI GCAGTG 2 cut(s) 533, 759
BtsIMutI CAGTG 4 cut(s) 533, 759, 848, 1062
Cac8I GCNNGC 2 cut(s) 288, 390
CaiI CAGNNNCTG 1 cut(s) 743
CfoI GCGC 2 cut(s) 397, 655
Cfr13I GGNCC 3 cut(s) 315, 938, 1001
CseI GACGC 1 cut(s) 895
Csp6I GTAC 9 cut(s) 129, 135, 240, 436, 469, 483, 598, 832, 863
CspCI CAANNNNNGTGG 2 cut(s) 824, 859
CviAII CATG 4 cut(s) 156, 353, 487, 732
CviQI GTAC 9 cut(s) 129, 135, 240, 436, 469, 483, 598, 832, 863
DdeI CTNAG 5 cut(s) 36, 291, 603, 648, 713
DpnI GATC 6 cut(s) 224, 264, 299, 555, 777, 807
DpnII GATC 6 cut(s) 222, 262, 297, 553, 775, 805
EaeI YGGCCR 1 cut(s) 10
Eam1104I CTCTTC 1 cut(s) 249
EarI CTCTTC 1 cut(s) 249
EciI GGCGGA 1 cut(s) 446
Ecl136II GAGCTC 1 cut(s) 872
Eco130I CCWWGG 1 cut(s) 352
Eco24I GRGCYC 2 cut(s) 663, 874
Eco31I GGTCTC 1 cut(s) 1111
Eco32I GATATC 1 cut(s) 691
Eco47I GGWCC 1 cut(s) 938
Eco53kI GAGCTC 1 cut(s) 872
Eco57I CTGAAG 1 cut(s) 765
Eco72I CACGTG 1 cut(s) 178
Eco88I CYCGRG 1 cut(s) 200
EcoICRI GAGCTC 1 cut(s) 872
EcoO109I RGGNCCY 1 cut(s) 315
EcoRI GAATTC 1 cut(s) 73
EcoRII CCWGG 2 cut(s) 339, 865
EcoRV GATATC 1 cut(s) 691
EcoT14I CCWWGG 1 cut(s) 352
EcoT38I GRGCYC 2 cut(s) 663, 874
ErhI CCWWGG 1 cut(s) 352
FaeI CATG 4 cut(s) 159, 356, 490, 735
FalI AAGNNNNNCTT 2 cut(s) 109, 141
FatI CATG 4 cut(s) 155, 352, 486, 731
FauNDI CATATG 1 cut(s) 705
FblI GTMKAC 1 cut(s) 122
Fnu4HI GCNGC 1 cut(s) 393
FokI GGATG 2 cut(s) 469, 779
FriOI GRGCYC 2 cut(s) 663, 874
Fsp4HI GCNGC 1 cut(s) 393
FspBI CTAG 5 cut(s) 477, 875, 977, 1097, 1115
GlaI GCGC 2 cut(s) 396, 654
GluI GCNGC 1 cut(s) 393
GsuI CTGGAG 1 cut(s) 888
HaeII RGCGCY 1 cut(s) 656
HaeIII GGCC 4 cut(s) 12, 45, 317, 1003
HapII CCGG 3 cut(s) 254, 310, 1110
HgaI GACGC 1 cut(s) 895
HhaI GCGC 2 cut(s) 397, 655
Hin1II CATG 4 cut(s) 159, 356, 490, 735
Hin6I GCGC 2 cut(s) 395, 653
HinP1I GCGC 2 cut(s) 395, 653
HincII GTYRAC 1 cut(s) 1017
HindII GTYRAC 1 cut(s) 1017
HinfI GANTC 2 cut(s) 91, 709
HpaI GTTAAC 1 cut(s) 1017
HpaII CCGG 3 cut(s) 254, 310, 1110
HphI GGTGA 3 cut(s) 307, 358, 665
Hpy166II GTNNAC 5 cut(s) 123, 349, 613, 818, 1017
Hpy188I TCNGA 7 cut(s) 96, 235, 322, 649, 775, 968, 1024
Hpy188III TCNNGA 7 cut(s) 86, 310, 407, 560, 803, 990, 1046
Hpy8I GTNNAC 5 cut(s) 123, 349, 613, 818, 1017
HpyAV CCTTC 7 cut(s) 106, 276, 421, 454, 508, 929, 981
HpyCH4III ACNGT 2 cut(s) 1057, 1131
HpyCH4IV ACGT 4 cut(s) 137, 177, 238, 609
HpyCH4V TGCA 4 cut(s) 159, 388, 526, 579
HpyF10VI GCNNNNNNNGC 1 cut(s) 394
HpyF3I CTNAG 5 cut(s) 36, 291, 603, 648, 713
HpySE526I ACGT 4 cut(s) 137, 177, 238, 609
Hsp92II CATG 4 cut(s) 159, 356, 490, 735
HspAI GCGC 2 cut(s) 395, 653
Kpn2I TCCGGA 1 cut(s) 309
KspAI GTTAAC 1 cut(s) 1017
Kzo9I GATC 6 cut(s) 222, 262, 297, 553, 775, 805
LmnI GCTCC 1 cut(s) 869
MaeI CTAG 5 cut(s) 477, 875, 977, 1097, 1115
MaeII ACGT 4 cut(s) 137, 177, 238, 609
MaeIII GTNAC 2 cut(s) 146, 625
MalI GATC 6 cut(s) 224, 264, 299, 555, 777, 807
MboI GATC 6 cut(s) 222, 262, 297, 553, 775, 805
MboII GAAGA 7 cut(s) 54, 226, 236, 328, 848, 1037, 1130
MflI RGATCY 3 cut(s) 222, 262, 775
MhlI GDGCHC 2 cut(s) 663, 874
MlsI TGGCCA 1 cut(s) 12
MluNI TGGCCA 1 cut(s) 12
Mox20I TGGCCA 1 cut(s) 12
MroI TCCGGA 1 cut(s) 309
MscI TGGCCA 1 cut(s) 12
MseI TTAA 2 cut(s) 210, 1016
Msp20I TGGCCA 1 cut(s) 12
MspI CCGG 3 cut(s) 254, 310, 1110
MspR9I CCNGG 4 cut(s) 254, 341, 867, 1111
MvaI CCWGG 2 cut(s) 341, 867
MvnI CGCG 1 cut(s) 397
MwoI GCNNNNNNNGC 1 cut(s) 394
NciI CCSGG 2 cut(s) 254, 1111
NcoI CCATGG 1 cut(s) 352
NdeI CATATG 1 cut(s) 705
NdeII GATC 6 cut(s) 222, 262, 297, 553, 775, 805
NlaIII CATG 4 cut(s) 159, 356, 490, 735
NlaIV GGNNCC 2 cut(s) 224, 777
NmeAIII GCCGAG 1 cut(s) 441
NmuCI GTSAC 2 cut(s) 146, 625
NspI RCATGY 1 cut(s) 159
PaeR7I CTCGAG 1 cut(s) 200
PcsI WCGNNNNNNNCGW 1 cut(s) 244
PfeI GAWTC 2 cut(s) 91, 709
PflFI GACNNNGTC 1 cut(s) 305
PkrI GCNGC 1 cut(s) 394
PmaCI CACGTG 1 cut(s) 178
PmlI CACGTG 1 cut(s) 178
Ppu21I YACGTR 2 cut(s) 138, 178
Psp124BI GAGCTC 1 cut(s) 874
Psp6I CCWGG 2 cut(s) 339, 865
PspCI CACGTG 1 cut(s) 178
PspGI CCWGG 2 cut(s) 339, 865
PspN4I GGNNCC 2 cut(s) 224, 777
PspPI GGNCC 3 cut(s) 315, 938, 1001
PspXI VCTCGAGB 1 cut(s) 200
PstNI CAGNNNCTG 1 cut(s) 743
PsuI RGATCY 3 cut(s) 222, 262, 775
PsyI GACNNNGTC 1 cut(s) 305
RsaI GTAC 9 cut(s) 130, 136, 241, 437, 470, 484, 599, 833, 864
RsaNI GTAC 9 cut(s) 129, 135, 240, 436, 469, 483, 598, 832, 863
SacI GAGCTC 1 cut(s) 874
SaqAI TTAA 2 cut(s) 210, 1016
SatI GCNGC 1 cut(s) 393
Sau3AI GATC 6 cut(s) 222, 262, 297, 553, 775, 805
Sau96I GGNCC 3 cut(s) 315, 938, 1001
ScaI AGTACT 3 cut(s) 437, 470, 599
ScrFI CCNGG 4 cut(s) 254, 341, 867, 1111
SduI GDGCHC 2 cut(s) 663, 874
SfcI CTRYAG 1 cut(s) 439
Sfr274I CTCGAG 1 cut(s) 200
SinI GGWCC 1 cut(s) 938
SlaI CTCGAG 1 cut(s) 200
SmlI CTYRAG 3 cut(s) 200, 558, 988
SmoI CTYRAG 3 cut(s) 200, 558, 988
SsiI CCGC 3 cut(s) 164, 392, 431
SspMI CTAG 5 cut(s) 477, 875, 977, 1097, 1115
SstI GAGCTC 1 cut(s) 874
StyD4I CCNGG 4 cut(s) 252, 339, 865, 1109
StyI CCWWGG 1 cut(s) 352
TaaI ACNGT 2 cut(s) 1057, 1131
TaiI ACGT 4 cut(s) 140, 180, 241, 612
TaqI TCGA 3 cut(s) 85, 201, 300
TatI WGTACW 4 cut(s) 128, 435, 468, 597
TauI GCSGC 1 cut(s) 395
TfiI GAWTC 2 cut(s) 91, 709
Tru1I TTAA 2 cut(s) 210, 1016
Tru9I TTAA 2 cut(s) 210, 1016
TscAI CASTG 4 cut(s) 533, 766, 848, 1062
TseFI GTSAC 2 cut(s) 146, 625
Tsp45I GTSAC 2 cut(s) 146, 625
TspDTI ATGAA 4 cut(s) 91, 473, 889, 948
TspGWI ACGGA 2 cut(s) 235, 294
TspRI CASTG 4 cut(s) 533, 766, 848, 1062
Tth111I GACNNNGTC 1 cut(s) 305
VpaK11BI GGWCC 1 cut(s) 938
XapI RAATTY 4 cut(s) 73, 564, 638, 945
XceI RCATGY 1 cut(s) 159
XcmI CCANNNNNNNNNTGG 1 cut(s) 370
XhoI CTCGAG 1 cut(s) 200
XmiI GTMKAC 1 cut(s) 122
XspI CTAG 5 cut(s) 477, 875, 977, 1097, 1115
ZrmI AGTACT 3 cut(s) 437, 470, 599
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.