Rh4CG376000

Belongs to the iron ascorbate-dependent oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
OG0000054
Physical Location & Seq
Forward (+)
62980793 .. 62982774
1982 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG376000.1

Sequence Viewer

Length: 1080 bp
ATGGAGGCCACCGGTGACCGTACAAGTGAATTAAAAGCGTTTGATGATACAAAAGCCGGTGTGAAAGGACTGGTGGATGCAGGCATCACAAGAATCCCTCGCATTTTCCACTCTAGATCACAACCAAGTGTTGATCAGAGGGAGGGAAGTGACGGTGGCGCCAAGTTGAGTATTCCGATCATTGATCTTCAAGGCATAATCCATGCAGACTCAGCTTTACGAGCTGAGGTGATGGAGAAAGTTCGACATGCGTGTGAGAAATGGGGTTTCTTTCAGGTAGTGAATCATGGAATTCCTGTAAATGTTTTGGATGGGGTGATTCGAGGAATGCGAGAGTTCCATGAGCAGGATAGTGAGCTGAAGAAAGAGTTGTATACAAGGACTCCCGGGAACAAGGTGTATTATCTGTCTAATCATGATTTGTACCAAGCTTCATCAGCTGACTGGAGAGACACACTTGCCTGTTCTATGGTTCCTAATCCCCCCAAACCAGAAGAATTACCATCAGTATGCAGAGATATAGTGATCGAGTACTCAAAGCATGTGAAGGATTTGGGATTAACCTTGTTTGAGATACTGTCTGAGGCTCTTGGGCTTAATCCCAACCATCTTAAAGACATGAACTGCGCCGAGGGCATTCTTCTCGTTGGTAACTACTATCCAGCATGCCCTGAGCCAGAATTAACTTTCGGCATTGGCAAGCATACTGATTTTACTTTCATCACCATTCTTTTGCAAGACCAAGTAGGCGGTCTTGAAGCTTTGTATGAGAATCAATGGATTAATGTTTCCCCCATGCATGGAGCTCTAGTTGTCAACGTTGGAGACATTCTTCAGGTCATAACAAATGACAAGTTTATTAGCGCGGCTCACAGAGTTAGAGCAACTAACATAGGGCCAAGAACTTCTGTGGTAAGTTTTTTTGGATTTGACGGGAACTCTAAAGTTTTTGCACCAATCAAAGAGTTGTTATCAGAAGAGAATCCCCAAATCTACCAAGAAGTTGATATTAAAGATTATGTAAGGTACTTCTACTCAGAAGGTAAAGAGAATTCCCCATTACGACATTTCAAGTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2OG-FeII_Oxy DIOX_N

Protein Analysis

359

Amino Acids

40.16

Weight (kDa)

5.49

Isoelectric Point (pI)

34.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 58 - 162 1.4e-21 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 215 - 308 1.6e-29 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000054)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03400 AT1G03400 AT1G03410 AT1G03410 AT1G04350 AT1G06620 AT1G06620 AT1G06640 AT1G06640 AT1G06640 AT1G06645 AT1G06650 AT1G06650 AT2G25450 AT2G30830 AT2G30840 AT2G30840 AT2G30840 AT3G61400 AT3G61400 AT5G43440 AT5G43440 AT5G43450 AT5G43450 AT5G59530 AT5G59540 AT5G59540
fragaria_vesca FvH4_2g03190 FvH4_2g03220 FvH4_3g07861 FvH4_3g31880 FvH4_3g31880 FvH4_3g31880 FvH4_4g03241 FvH4_4g03250 FvH4_4g03251 FvH4_4g03260 FvH4_4g03300 FvH4_4g03301 FvH4_4g03301 FvH4_4g03301 FvH4_4g03302 FvH4_4g03303 FvH4_4g03303 FvH4_4g03304 FvH4_4g03305 FvH4_4g03323 FvH4_4g03323 FvH4_5g19290 FvH4_5g19290 FvH4_5g19290 FvH4_5g19291 FvH4_5g19291 FvH4_5g19310 FvH4_5g19310 FvH4_5g19310 FvH4_5g19320 FvH4_5g19321 FvH4_5g19321 FvH4_5g19321 FvH4_7g31470
malus_domestica MD00G1220300.v1.1 MD02G1050800.v1.1 MD02G1053200.v1.1 MD02G1053300.v1.1 MD02G1054900.v1.1 MD03G1032300.v1.1 MD03G1245000.v1.1 MD03G1245300.v1.1 MD05G1014200.v1.1 MD13G1210900.v1.1 MD13G1211000.v1.1 MD13G1211100.v1.1 MD13G1211200.v1.1 MD13G1211800.v1.1 MD13G1211900.v1.1 MD13G1212000.v1.1 MD16G1214100.v1.1 MD16G1214300.v1.1 MD16G1214400.v1.1 MD16G1214600.v1.1 MD16G1215000.v1.1 MD16G1215200.v1.1 MD16G1215300.v1.1 MD16G1215500.v1.1 MD16G1271000.v1.1
prunus_persica Prupe.1G035500_v2.0.a1 Prupe.1G035700_v2.0.a1 Prupe.1G035800_v2.0.a1 Prupe.1G035900_v2.0.a1 Prupe.1G036000_v2.0.a1 Prupe.1G036100_v2.0.a1 Prupe.1G036200_v2.0.a1 Prupe.1G036400_v2.0.a1 Prupe.1G036500_v2.0.a1 Prupe.1G036600_v2.0.a1 Prupe.1G036700_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G191000_v2.0.a1 Prupe.1G191100_v2.0.a1
pyrus_communis pycom13g18340 pycom13g18350 pycom13g18380 pycom16g17990 pycom16g18010 pycom16g18020
rosa_chinensis RchiOBHm_Chr2g0124051 RchiOBHm_Chr4g0391811 RchiOBHm_Chr4g0391931 RchiOBHm_Chr4g0391961 RchiOBHm_Chr4g0391971 RchiOBHm_Chr4g0391981 RchiOBHm_Chr4g0391991 RchiOBHm_Chr4g0392031 RchiOBHm_Chr4g0392051 RchiOBHm_Chr4g0392061 RchiOBHm_Chr4g0392071 RchiOBHm_Chr4g0392081 RchiOBHm_Chr4g0392091 RchiOBHm_Chr4g0392111 RchiOBHm_Chr4g0392121 RchiOBHm_Chr4g0392131 RchiOBHm_Chr4g0392141 RchiOBHm_Chr4g0392151 RchiOBHm_Chr4g0392211 RchiOBHm_Chr4g0392251 RchiOBHm_Chr4g0392261 RchiOBHm_Chr4g0392301 RchiOBHm_Chr4g0392311 RchiOBHm_Chr4g0392341 RchiOBHm_Chr4g0409221 RchiOBHm_Chr4g0410991 RchiOBHm_Chr4g0429131 RchiOBHm_Chr4g0437051 RchiOBHm_Chr5g0038681 RchiOBHm_Chr5g0047071 RchiOBHm_Chr5g0058651 RchiOBHm_Chr6g0248121 RchiOBHm_Chr6g0248141 RchiOBHm_Chr6g0248291 RchiOBHm_Chr6g0248341 RchiOBHm_Chr6g0248351
rosa_laevigata RLG00000006473 RLG00000006475 RLG00000006667 RLG00000007095 RLG00000009819 RLG00000009820 RLG00000009821 RLG00000009822 RLG00000009825 RLG00000009826 RLG00000009830 RLG00000009831 RLG00000009832 RLG00000009833 RLG00000009834 RLG00000009835 RLG00000009837 RLG00000009838 RLG00000009839 RLG00000009841 RLG00000009842 RLG00000009844 RLG00000009845 RLG00000009846 RLG00000009847 RLG00000009848 RLG00000009849 RLG00000015160 RLG00000015161 RLG00000017791 RLG00000018779 RLG00000034461 RLG00000035237
rosa_multiflora Rmu_co8253791.1_g000001 Rmu_co8348827.1_g000001 Rmu_co8400489.1_g000001 Rmu_sc0000383.1_g000003 Rmu_sc0000383.1_g000005 Rmu_sc0000383.1_g000026 Rmu_sc0000846.1_g000012 Rmu_sc0001231.1_g000013 Rmu_sc0001231.1_g000026 Rmu_sc0001231.1_g000028 Rmu_sc0001800.1_g000027 Rmu_sc0003436.1_g000022 Rmu_sc0004104.1_g000004 Rmu_sc0004295.1_g000021 Rmu_sc0004295.1_g000031 Rmu_sc0004928.1_g000002 Rmu_sc0004928.1_g000008 Rmu_sc0004928.1_g000011 Rmu_sc0004928.1_g000027 Rmu_sc0004977.1_g000007 Rmu_sc0005018.1_g000002 Rmu_sc0005091.1_g000026 Rmu_sc0005091.1_g000032 Rmu_sc0005091.1_g000033 Rmu_sc0005817.1_g000003 Rmu_sc0005817.1_g000008 Rmu_sc0012482.1_g000002 Rmu_sc0014210.1_g000001 Rmu_sc0016150.1_g000001 Rmu_sc0029701.1_g000002 Rmu_sc0036585.1_g000001 Rmu_sc0037489.1_g000002
rosa_roxburghii Rroxscaffold_1G00021790 Rroxscaffold_1G00021800 Rroxscaffold_1G00034360 Rroxscaffold_2G00120130 Rroxscaffold_5G00337210 Rroxscaffold_5G00337220 Rroxscaffold_5G00337230 Rroxscaffold_5G00337250 Rroxscaffold_5G00337260 Rroxscaffold_5G00337270 Rroxscaffold_5G00337300 Rroxscaffold_5G00337310 Rroxscaffold_5G00337320 Rroxscaffold_5G00337330 Rroxscaffold_5G00337350 Rroxscaffold_5G00337370 Rroxscaffold_5G00337390 Rroxscaffold_5G00337400 Rroxscaffold_5G00337420 Rroxscaffold_5G00337430 Rroxscaffold_5G00337450 Rroxscaffold_5G00337470 Rroxscaffold_5G00337480 Rroxscaffold_5G00337520 Rroxscaffold_5G00378130 Rroxscaffold_6G00397800 Rroxscaffold_7G00213320 Rroxscaffold_7G00213390 Rroxscaffold_7G00213420 Rroxscaffold_7G00213470
rosa_rugosa Rorug02G0070100 Rorug02G0070100 Rorug02G0070100 Rorug02G0128600 Rorug02G0128700 Rorug02G0128800 Rorug02G0128900 Rorug02G0248400 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337100 Rorug03G0337200 Rorug03G0337300 Rorug03G0337600 Rorug03G0337700 Rorug03G0337800 Rorug03G0337900 Rorug03G0337900 Rorug03G0338000 Rorug03G0338100 Rorug03G0338200 Rorug04G0233200.1 Rorug04G0297900 Rorug05G0233700 Rorug05G0316700 Rorug05G0530800 Rorug05G0530900
rosa_samantha Rh2AG307400 Rh2BG316500 Rh2DG331200 Rh4AG039300 Rh4AG039400 Rh4AG039600 Rh4AG039700 Rh4AG039900 Rh4AG040000 Rh4AG040100 Rh4AG040300 Rh4AG040500 Rh4AG040700 Rh4AG041000 Rh4AG041100 Rh4AG041600 Rh4AG041800 Rh4AG041900 Rh4AG352400 Rh4BG033200 Rh4BG034100 Rh4BG034300 Rh4BG034700 Rh4BG034800 Rh4BG035200 Rh4BG035400 Rh4BG036000 Rh4BG036200 Rh4BG036300 Rh4BG036500 Rh4BG036800 Rh4BG361700 Rh4CG042000 Rh4CG042200 Rh4CG042300 Rh4CG042500 Rh4CG042600 Rh4CG042800 Rh4CG043200 Rh4CG043400 Rh4CG043500 Rh4CG043700 Rh4CG043800 Rh4CG044200 Rh4CG044500 Rh4CG044700 Rh4CG177000 Rh4CG310600 Rh4CG376000 Rh4DG036300 Rh4DG036900 Rh4DG037000 Rh4DG037100 Rh4DG037200 Rh4DG037300 Rh4DG037500 Rh4DG037700 Rh4DG037800 Rh4DG037900 Rh4DG038000 Rh4DG038200 Rh4DG038500 Rh4DG038700 Rh4DG038900 Rh4DG159600 Rh5CG347900 Rh5DG409900 Rh6AG045300 Rh6AG045800 Rh6AG046000 Rh6AG046100 Rh6BG040600 Rh6BG040700 Rh6BG042200 Rh6BG042700 Rh6BG042800 Rh6DG035900 Rh6DG036100 Rh6DG036200
rosa_wichuraiana Rw0G010420 Rw2G024780 Rw4G003020 Rw4G003070 Rw4G003080 Rw4G003090 Rw4G003100 Rw4G003130 Rw4G003140 Rw4G003150 Rw4G003180 Rw4G003190 Rw4G003200 Rw4G003210 Rw4G003220 Rw4G003240 Rw4G003270 Rw4G025050 Rw4G030850 Rw6G003930 Rw6G004000 Rw6G004030 Rw6G004040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 158
AccI GTMKAC 1 cut(s) 374
AccII CGCG 1 cut(s) 866
AciI CCGC 2 cut(s) 750, 866
AclI AACGTT 1 cut(s) 819
AcsI RAATTY 2 cut(s) 291, 1051
AcuI CTGAAG 2 cut(s) 380, 818
AcyI GRCGYC 1 cut(s) 159
AfaI GTAC 4 cut(s) 22, 425, 533, 1028
AfiI CCNNNNNNNGG 2 cut(s) 346, 800
AgeI ACCGGT 1 cut(s) 11
AgsI TTSAA 3 cut(s) 191, 758, 1072
AluBI AGCT 7 cut(s) 215, 224, 358, 431, 440, 761, 806
AluI AGCT 7 cut(s) 215, 224, 358, 431, 440, 761, 806
Alw21I GWGCWC 1 cut(s) 808
Alw26I GTCTC 2 cut(s) 444, 819
Ama87I CYCGRG 1 cut(s) 386
AoxI GGCC 2 cut(s) 6, 896
ApoI RAATTY 2 cut(s) 291, 1051
AseI ATTAAT 1 cut(s) 783
AsiGI ACCGGT 1 cut(s) 11
AspLEI GCGC 3 cut(s) 161, 629, 866
AspS9I GGNCC 1 cut(s) 896
AsuC2I CCSGG 2 cut(s) 387, 388
AsuHPI GGTGA 4 cut(s) 26, 241, 328, 715
AvaI CYCGRG 1 cut(s) 386
BanI GGYRCC 1 cut(s) 158
BanII GRGCYC 1 cut(s) 808
Bbv12I GWGCWC 1 cut(s) 808
BbvCI CCTCAGC 1 cut(s) 225
BccI CCATC 4 cut(s) 226, 305, 511, 615
BcgI CGANNNNNNTGC 2 cut(s) 625, 659
BclI TGATCA 1 cut(s) 133
BcnI CCSGG 2 cut(s) 387, 388
BcoDI GTCTC 2 cut(s) 444, 819
BfaI CTAG 2 cut(s) 114, 809
BfoI RGCGCY 1 cut(s) 162
BisI GCNGC 1 cut(s) 867
BlsI GCNGC 1 cut(s) 868
BmcAI AGTACT 1 cut(s) 533
Bme1390I CCNGG 2 cut(s) 387, 388
BmeT110I CYCGRG 1 cut(s) 386
BmgT120I GGNCC 1 cut(s) 896
BmiI GGNNCC 2 cut(s) 160, 474
BmrFI CCNGG 2 cut(s) 387, 388
BmsI GCATC 2 cut(s) 67, 93
BpmI CTGGAG 1 cut(s) 466
Bpu10I CCTNAGC 2 cut(s) 225, 672
BpuMI CCSGG 2 cut(s) 387, 388
BsaHI GRCGYC 1 cut(s) 159
BsaJI CCNNGG 2 cut(s) 386, 630
BsaWI WCCGGW 1 cut(s) 11
BsaXI ACNNNNNCTCC 4 cut(s) 367, 397, 795, 825
Bsc4I CCNNNNNNNGG 2 cut(s) 346, 800
Bse118I RCCGGY 2 cut(s) 11, 56
Bse1I ACTGG 2 cut(s) 75, 449
BseDI CCNNGG 2 cut(s) 386, 630
BseGI GGATG 2 cut(s) 82, 316
BseLI CCNNNNNNNGG 2 cut(s) 346, 800
BseMII CTCAG 5 cut(s) 216, 225, 573, 663, 1050
BseNI ACTGG 2 cut(s) 75, 449
Bsh1236I CGCG 1 cut(s) 866
BshFI GGCC 2 cut(s) 8, 898
BshNI GGYRCC 1 cut(s) 158
BshTI ACCGGT 1 cut(s) 11
BsiHKAI GWGCWC 1 cut(s) 808
BsiHKCI CYCGRG 1 cut(s) 386
BsiSI CCGG 3 cut(s) 12, 57, 387
BslI CCNNNNNNNGG 2 cut(s) 346, 800
BsmAI GTCTC 2 cut(s) 444, 819
BsmI GAATGC 2 cut(s) 333, 636
BsnI GGCC 2 cut(s) 8, 898
BsoBI CYCGRG 1 cut(s) 386
Bsp1286I GDGCHC 1 cut(s) 808
Bsp143I GATC 5 cut(s) 116, 133, 177, 184, 525
BspACI CCGC 2 cut(s) 750, 866
BspANI GGCC 2 cut(s) 8, 898
BspCNI CTCAG 5 cut(s) 217, 224, 574, 664, 1049
BspFNI CGCG 1 cut(s) 866
BspHI TCATGA 1 cut(s) 415
BspLI GGNNCC 2 cut(s) 160, 474
BspT107I GGYRCC 1 cut(s) 158
BsrFI RCCGGY 2 cut(s) 11, 56
BsrI ACTGG 2 cut(s) 75, 449
BssAI RCCGGY 2 cut(s) 11, 56
BssECI CCNNGG 2 cut(s) 386, 630
BssMI GATC 5 cut(s) 116, 133, 177, 184, 525
BssNAI GTATAC 1 cut(s) 375
BssNI GRCGYC 1 cut(s) 159
Bst1107I GTATAC 1 cut(s) 375
Bst4CI ACNGT 3 cut(s) 20, 155, 579
Bst6I CTCTTC 1 cut(s) 972
BstACI GRCGYC 1 cut(s) 159
BstC8I GCNNGC 3 cut(s) 82, 667, 701
BstDEI CTNAG 5 cut(s) 211, 225, 582, 672, 1036
BstEII GGTNACC 1 cut(s) 14
BstF5I GGATG 2 cut(s) 82, 316
BstFNI CGCG 1 cut(s) 866
BstH2I RGCGCY 1 cut(s) 162
BstHHI GCGC 3 cut(s) 161, 629, 866
BstKTI GATC 5 cut(s) 119, 136, 180, 187, 528
BstMAI GTCTC 2 cut(s) 444, 819
BstMBI GATC 5 cut(s) 116, 133, 177, 184, 525
BstMWI GCNNNNNNNGC 4 cut(s) 212, 221, 437, 633
BstNSI RCATGY 3 cut(s) 251, 545, 669
BstPI GGTNACC 1 cut(s) 14
BstSCI CCNGG 2 cut(s) 385, 386
BstUI CGCG 1 cut(s) 866
BstZ17I GTATAC 1 cut(s) 375
BsuRI GGCC 2 cut(s) 8, 898
BtsCI GGATG 2 cut(s) 82, 316
Cac8I GCNNGC 3 cut(s) 82, 667, 701
CciI TCATGA 1 cut(s) 415
CfoI GCGC 3 cut(s) 161, 629, 866
Cfr10I RCCGGY 2 cut(s) 11, 56
Cfr13I GGNCC 1 cut(s) 896
Cfr9I CCCGGG 1 cut(s) 386
Csp6I GTAC 4 cut(s) 21, 424, 532, 1027
CspAI ACCGGT 1 cut(s) 11
CviQI GTAC 4 cut(s) 21, 424, 532, 1027
DdeI CTNAG 5 cut(s) 211, 225, 582, 672, 1036
DinI GGCGCC 1 cut(s) 160
DpnI GATC 5 cut(s) 118, 135, 179, 186, 527
DpnII GATC 5 cut(s) 116, 133, 177, 184, 525
Eam1104I CTCTTC 1 cut(s) 972
EarI CTCTTC 1 cut(s) 972
Ecl136II GAGCTC 1 cut(s) 806
Eco24I GRGCYC 1 cut(s) 808
Eco53kI GAGCTC 1 cut(s) 806
Eco57I CTGAAG 2 cut(s) 380, 818
Eco88I CYCGRG 1 cut(s) 386
Eco91I GGTNACC 1 cut(s) 14
EcoICRI GAGCTC 1 cut(s) 806
EcoO65I GGTNACC 1 cut(s) 14
EcoRI GAATTC 2 cut(s) 291, 1051
EcoT22I ATGCAT 1 cut(s) 801
EcoT38I GRGCYC 1 cut(s) 808
EgeI GGCGCC 1 cut(s) 160
EheI GGCGCC 1 cut(s) 160
FbaI TGATCA 1 cut(s) 133
FblI GTMKAC 1 cut(s) 374
Fnu4HI GCNGC 1 cut(s) 867
FokI GGATG 2 cut(s) 89, 323
FriOI GRGCYC 1 cut(s) 808
Fsp4HI GCNGC 1 cut(s) 867
FspBI CTAG 2 cut(s) 114, 809
GlaI GCGC 3 cut(s) 160, 628, 865
GluI GCNGC 1 cut(s) 867
GsuI CTGGAG 1 cut(s) 466
HaeII RGCGCY 1 cut(s) 162
HaeIII GGCC 2 cut(s) 8, 898
HapII CCGG 3 cut(s) 12, 57, 387
HhaI GCGC 3 cut(s) 161, 629, 866
Hin1I GRCGYC 1 cut(s) 159
Hin6I GCGC 3 cut(s) 159, 627, 864
HinP1I GCGC 3 cut(s) 159, 627, 864
HincII GTYRAC 1 cut(s) 817
HindII GTYRAC 1 cut(s) 817
HindIII AAGCTT 2 cut(s) 429, 759
HinfI GANTC 7 cut(s) 93, 209, 283, 319, 382, 772, 982
HpaII CCGG 3 cut(s) 12, 57, 387
HphI GGTGA 4 cut(s) 26, 241, 328, 715
Hpy166II GTNNAC 2 cut(s) 375, 817
Hpy188I TCNGA 5 cut(s) 138, 177, 583, 976, 1039
Hpy188III TCNNGA 3 cut(s) 114, 416, 755
Hpy8I GTNNAC 2 cut(s) 375, 817
HpyAV CCTTC 2 cut(s) 541, 1034
HpyCH4III ACNGT 3 cut(s) 20, 155, 579
HpyCH4IV ACGT 1 cut(s) 819
HpyCH4V TGCA 6 cut(s) 80, 206, 513, 736, 799, 953
HpyF10VI GCNNNNNNNGC 4 cut(s) 212, 221, 437, 633
HpyF3I CTNAG 5 cut(s) 211, 225, 582, 672, 1036
HpySE526I ACGT 1 cut(s) 819
Hsp92I GRCGYC 1 cut(s) 159
HspAI GCGC 3 cut(s) 159, 627, 864
KasI GGCGCC 1 cut(s) 158
Ksp22I TGATCA 1 cut(s) 133
Kzo9I GATC 5 cut(s) 116, 133, 177, 184, 525
LmnI GCTCC 1 cut(s) 803
LweI GCATC 2 cut(s) 67, 93
MaeI CTAG 2 cut(s) 114, 809
MaeII ACGT 1 cut(s) 819
MaeIII GTNAC 3 cut(s) 14, 149, 650
MalI GATC 5 cut(s) 118, 135, 179, 186, 527
MboI GATC 5 cut(s) 116, 133, 177, 184, 525
MboII GAAGA 6 cut(s) 179, 373, 506, 632, 824, 989
MhlI GDGCHC 1 cut(s) 808
MluCI AATT 5 cut(s) 29, 291, 497, 680, 1051
Mly113I GGCGCC 1 cut(s) 159
MlyI GAGTC 2 cut(s) 203, 376
MmeI TCCRAC 1 cut(s) 802
MnlI CCTC 7 cut(s) 108, 132, 136, 220, 317, 577, 625
Mph1103I ATGCAT 1 cut(s) 801
MseI TTAA 7 cut(s) 32, 560, 597, 612, 683, 783, 1011
MslI CAYNNNNRTG 2 cut(s) 252, 508
MspA1I CMGCKG 1 cut(s) 440
MspI CCGG 3 cut(s) 12, 57, 387
MspR9I CCNGG 2 cut(s) 387, 388
Mva1269I GAATGC 2 cut(s) 333, 636
MvnI CGCG 1 cut(s) 866
MwoI GCNNNNNNNGC 4 cut(s) 212, 221, 437, 633
NarI GGCGCC 1 cut(s) 159
NciI CCSGG 2 cut(s) 387, 388
NdeII GATC 5 cut(s) 116, 133, 177, 184, 525
NlaIV GGNNCC 2 cut(s) 160, 474
NmeAIII GCCGAG 1 cut(s) 655
NmuCI GTSAC 2 cut(s) 14, 149
NsiI ATGCAT 1 cut(s) 801
NspI RCATGY 3 cut(s) 251, 545, 669
PaeI GCATGC 1 cut(s) 669
PagI TCATGA 1 cut(s) 415
PcsI WCGNNNNNNNCGW 1 cut(s) 328
PctI GAATGC 2 cut(s) 333, 636
PfeI GAWTC 5 cut(s) 93, 283, 319, 772, 982
PinAI ACCGGT 1 cut(s) 11
PkrI GCNGC 1 cut(s) 868
PleI GAGTC 2 cut(s) 203, 376
PluTI GGCGCC 1 cut(s) 162
PpsI GAGTC 2 cut(s) 203, 376
PshBI ATTAAT 1 cut(s) 783
Psp124BI GAGCTC 1 cut(s) 808
Psp1406I AACGTT 1 cut(s) 819
PspEI GGTNACC 1 cut(s) 14
PspN4I GGNNCC 2 cut(s) 160, 474
PspPI GGNCC 1 cut(s) 896
PvuII CAGCTG 1 cut(s) 440
RsaI GTAC 4 cut(s) 22, 425, 533, 1028
RsaNI GTAC 4 cut(s) 21, 424, 532, 1027
RseI CAYNNNNRTG 2 cut(s) 252, 508
SacI GAGCTC 1 cut(s) 808
SaqAI TTAA 7 cut(s) 32, 560, 597, 612, 683, 783, 1011
SatI GCNGC 1 cut(s) 867
Sau3AI GATC 5 cut(s) 116, 133, 177, 184, 525
Sau96I GGNCC 1 cut(s) 896
ScaI AGTACT 1 cut(s) 533
SchI GAGTC 2 cut(s) 203, 376
ScrFI CCNGG 2 cut(s) 387, 388
SduI GDGCHC 1 cut(s) 808
SfaNI GCATC 2 cut(s) 67, 93
SfoI GGCGCC 1 cut(s) 160
SgrAI CRCCGGYG 1 cut(s) 11
SmaI CCCGGG 1 cut(s) 388
SmiMI CAYNNNNRTG 2 cut(s) 252, 508
SphI GCATGC 1 cut(s) 669
Sse9I AATT 5 cut(s) 29, 291, 497, 680, 1051
SsiI CCGC 2 cut(s) 750, 866
SspDI GGCGCC 1 cut(s) 158
SspMI CTAG 2 cut(s) 114, 809
SstI GAGCTC 1 cut(s) 808
StyD4I CCNGG 2 cut(s) 385, 386
TaaI ACNGT 3 cut(s) 20, 155, 579
TaiI ACGT 1 cut(s) 822
TaqI TCGA 3 cut(s) 244, 322, 528
TasI AATT 5 cut(s) 29, 291, 497, 680, 1051
TatI WGTACW 1 cut(s) 531
TauI GCSGC 1 cut(s) 869
TfiI GAWTC 5 cut(s) 93, 283, 319, 772, 982
Tru1I TTAA 7 cut(s) 32, 560, 597, 612, 683, 783, 1011
Tru9I TTAA 7 cut(s) 32, 560, 597, 612, 683, 783, 1011
TseFI GTSAC 2 cut(s) 14, 149
Tsp45I GTSAC 2 cut(s) 14, 149
TspDTI ATGAA 3 cut(s) 423, 635, 709
TspMI CCCGGG 1 cut(s) 386
VspI ATTAAT 1 cut(s) 783
XapI RAATTY 2 cut(s) 291, 1051
XbaI TCTAGA 1 cut(s) 113
XceI RCATGY 3 cut(s) 251, 545, 669
XmaI CCCGGG 1 cut(s) 386
XmiI GTMKAC 1 cut(s) 374
XspI CTAG 2 cut(s) 114, 809
ZrmI AGTACT 1 cut(s) 533
Zsp2I ATGCAT 1 cut(s) 801
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.