Rh2DG331200

Belongs to the iron ascorbate-dependent oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0000054
Physical Location & Seq
Forward (+)
42293961 .. 42296382
2422 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG331200.1

Sequence Viewer

Length: 1341 bp
ATGTTAAATGTATTAATGCCAGACAGAGAAAATGGTTGGCGGGTATCGTTGTCCTTTGGATTCAAGTCATCAGAGGTTCAAATCAAAGAAAAGGAAGGTCCATTTGTACTTGTACGTGTCAAACTCACATTACATGCACACTGCACTGAGACCACGTGGATTTGCGTGTCCAAAGCCTTGAGCGAATTAAGAAGAAACGGATCCCCTCTTCAGTCAGTCTTGAGTCCTAGTCATTCACCAGATTTCATAAAAATGGTCACCGGGAAATCAAGCGACCCAGAGCGTCTGCAGCAGCTGAAGGCCTTCGACGACTCCAAAACTGGTGTCAAAGGGATCGTCGATGCCGGAATCACCAAACTCCCACCAATTTTCGTCCGTCCAAAGAAAGATCCCTCCGTCGTTGGCGACCGTACGGTTTCAGGTCATTTCAGTATCCCAGTGGTGGATCTGGCTGAATATAACGGAAGGCGTGCTGAAGTGATCGACCAAGTCCGGAGGGCCTCAGAGAGCTATGGCTTCTTCCAGCTGGTGAACCATGGGATACCCAAGAGAGTGATGGAGGAGATGATGGAGGCGGCGCGTGTGTTTCACGAGCTGCCGAGGGAGGAGAAGGCGGAGTACTATAGTAGGGAGATGGGGATGAAGGTCAAGTACTACTCTAGCAGTACCATGTATGATTTGATGTTTGCTGATTGGAAGGACACTTTGCAGTGCATCGTAAGTGACGAGCAGTTTGATCCTCAACAAATTCCTCTCGTTTGCAGAGAGATAACTATGGAGTACTCTAAGCACGTTCACAAATTAGGTGTCACTTTGTTTGAATTTATATCTGAGGCGCTTGGGCTCAAACCTAATCACCTCAAAAACTTGGATATCACAAAGGGGCATATGATTCTTAGTCATTACTATCCACCATGCCCAGAGCCTGAAGTAGCTATTGGCACTGCTGAACACTCGGATCCTAATTTTATGACCATCCTACTTCAAGATCAAATTGGTGGACTTCAAGTTTTGTACCAAAATCAGTGGATTGATGTTCTTCCTGTACCTGGAGCTCTAGTGGTGAACATCGGAGATTTCTTACAGCTAATCTCAAACAATAAGTTCATAAGCATCATTCACAGAGTATTGGCTAAAAATGAAGGTCCAAGAATTTCTGTGGCATGTTTTTTTAGACCTTCACTAGAAAACTCCTCAAGATTATATGGGCCAATCAAGGAGTTAACATCAGAAGAAAAACCTCCAATTTATCAGGAAACAACAGTGAAAGATTATGTTATGTGCCACTACAAGAGATGGGAACTAGATGAGGTCTCTGGGCTAGAAGACTTGAAACTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2OG-FeII_Oxy DIOX_N

Protein Analysis

446

Amino Acids

50.78

Weight (kDa)

6.19

Isoelectric Point (pI)

45.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 145 - 248 4e-22 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 296 - 393 7.3e-32 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000054)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03400 AT1G03400 AT1G03410 AT1G03410 AT1G04350 AT1G06620 AT1G06620 AT1G06640 AT1G06640 AT1G06640 AT1G06645 AT1G06650 AT1G06650 AT2G25450 AT2G30830 AT2G30840 AT2G30840 AT2G30840 AT3G61400 AT3G61400 AT5G43440 AT5G43440 AT5G43450 AT5G43450 AT5G59530 AT5G59540 AT5G59540
fragaria_vesca FvH4_2g03190 FvH4_2g03220 FvH4_3g07861 FvH4_3g31880 FvH4_3g31880 FvH4_3g31880 FvH4_4g03241 FvH4_4g03250 FvH4_4g03251 FvH4_4g03260 FvH4_4g03300 FvH4_4g03301 FvH4_4g03301 FvH4_4g03301 FvH4_4g03302 FvH4_4g03303 FvH4_4g03303 FvH4_4g03304 FvH4_4g03305 FvH4_4g03323 FvH4_4g03323 FvH4_5g19290 FvH4_5g19290 FvH4_5g19290 FvH4_5g19291 FvH4_5g19291 FvH4_5g19310 FvH4_5g19310 FvH4_5g19310 FvH4_5g19320 FvH4_5g19321 FvH4_5g19321 FvH4_5g19321 FvH4_7g31470
malus_domestica MD00G1220300.v1.1 MD02G1050800.v1.1 MD02G1053200.v1.1 MD02G1053300.v1.1 MD02G1054900.v1.1 MD03G1032300.v1.1 MD03G1245000.v1.1 MD03G1245300.v1.1 MD05G1014200.v1.1 MD13G1210900.v1.1 MD13G1211000.v1.1 MD13G1211100.v1.1 MD13G1211200.v1.1 MD13G1211800.v1.1 MD13G1211900.v1.1 MD13G1212000.v1.1 MD16G1214100.v1.1 MD16G1214300.v1.1 MD16G1214400.v1.1 MD16G1214600.v1.1 MD16G1215000.v1.1 MD16G1215200.v1.1 MD16G1215300.v1.1 MD16G1215500.v1.1 MD16G1271000.v1.1
prunus_persica Prupe.1G035500_v2.0.a1 Prupe.1G035700_v2.0.a1 Prupe.1G035800_v2.0.a1 Prupe.1G035900_v2.0.a1 Prupe.1G036000_v2.0.a1 Prupe.1G036100_v2.0.a1 Prupe.1G036200_v2.0.a1 Prupe.1G036400_v2.0.a1 Prupe.1G036500_v2.0.a1 Prupe.1G036600_v2.0.a1 Prupe.1G036700_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G191000_v2.0.a1 Prupe.1G191100_v2.0.a1
pyrus_communis pycom13g18340 pycom13g18350 pycom13g18380 pycom16g17990 pycom16g18010 pycom16g18020
rosa_chinensis RchiOBHm_Chr2g0124051 RchiOBHm_Chr4g0391811 RchiOBHm_Chr4g0391931 RchiOBHm_Chr4g0391961 RchiOBHm_Chr4g0391971 RchiOBHm_Chr4g0391981 RchiOBHm_Chr4g0391991 RchiOBHm_Chr4g0392031 RchiOBHm_Chr4g0392051 RchiOBHm_Chr4g0392061 RchiOBHm_Chr4g0392071 RchiOBHm_Chr4g0392081 RchiOBHm_Chr4g0392091 RchiOBHm_Chr4g0392111 RchiOBHm_Chr4g0392121 RchiOBHm_Chr4g0392131 RchiOBHm_Chr4g0392141 RchiOBHm_Chr4g0392151 RchiOBHm_Chr4g0392211 RchiOBHm_Chr4g0392251 RchiOBHm_Chr4g0392261 RchiOBHm_Chr4g0392301 RchiOBHm_Chr4g0392311 RchiOBHm_Chr4g0392341 RchiOBHm_Chr4g0409221 RchiOBHm_Chr4g0410991 RchiOBHm_Chr4g0429131 RchiOBHm_Chr4g0437051 RchiOBHm_Chr5g0038681 RchiOBHm_Chr5g0047071 RchiOBHm_Chr5g0058651 RchiOBHm_Chr6g0248121 RchiOBHm_Chr6g0248141 RchiOBHm_Chr6g0248291 RchiOBHm_Chr6g0248341 RchiOBHm_Chr6g0248351
rosa_laevigata RLG00000006473 RLG00000006475 RLG00000006667 RLG00000007095 RLG00000009819 RLG00000009820 RLG00000009821 RLG00000009822 RLG00000009825 RLG00000009826 RLG00000009830 RLG00000009831 RLG00000009832 RLG00000009833 RLG00000009834 RLG00000009835 RLG00000009837 RLG00000009838 RLG00000009839 RLG00000009841 RLG00000009842 RLG00000009844 RLG00000009845 RLG00000009846 RLG00000009847 RLG00000009848 RLG00000009849 RLG00000015160 RLG00000015161 RLG00000017791 RLG00000018779 RLG00000034461 RLG00000035237
rosa_multiflora Rmu_co8253791.1_g000001 Rmu_co8348827.1_g000001 Rmu_co8400489.1_g000001 Rmu_sc0000383.1_g000003 Rmu_sc0000383.1_g000005 Rmu_sc0000383.1_g000026 Rmu_sc0000846.1_g000012 Rmu_sc0001231.1_g000013 Rmu_sc0001231.1_g000026 Rmu_sc0001231.1_g000028 Rmu_sc0001800.1_g000027 Rmu_sc0003436.1_g000022 Rmu_sc0004104.1_g000004 Rmu_sc0004295.1_g000021 Rmu_sc0004295.1_g000031 Rmu_sc0004928.1_g000002 Rmu_sc0004928.1_g000008 Rmu_sc0004928.1_g000011 Rmu_sc0004928.1_g000027 Rmu_sc0004977.1_g000007 Rmu_sc0005018.1_g000002 Rmu_sc0005091.1_g000026 Rmu_sc0005091.1_g000032 Rmu_sc0005091.1_g000033 Rmu_sc0005817.1_g000003 Rmu_sc0005817.1_g000008 Rmu_sc0012482.1_g000002 Rmu_sc0014210.1_g000001 Rmu_sc0016150.1_g000001 Rmu_sc0029701.1_g000002 Rmu_sc0036585.1_g000001 Rmu_sc0037489.1_g000002
rosa_roxburghii Rroxscaffold_1G00021790 Rroxscaffold_1G00021800 Rroxscaffold_1G00034360 Rroxscaffold_2G00120130 Rroxscaffold_5G00337210 Rroxscaffold_5G00337220 Rroxscaffold_5G00337230 Rroxscaffold_5G00337250 Rroxscaffold_5G00337260 Rroxscaffold_5G00337270 Rroxscaffold_5G00337300 Rroxscaffold_5G00337310 Rroxscaffold_5G00337320 Rroxscaffold_5G00337330 Rroxscaffold_5G00337350 Rroxscaffold_5G00337370 Rroxscaffold_5G00337390 Rroxscaffold_5G00337400 Rroxscaffold_5G00337420 Rroxscaffold_5G00337430 Rroxscaffold_5G00337450 Rroxscaffold_5G00337470 Rroxscaffold_5G00337480 Rroxscaffold_5G00337520 Rroxscaffold_5G00378130 Rroxscaffold_6G00397800 Rroxscaffold_7G00213320 Rroxscaffold_7G00213390 Rroxscaffold_7G00213420 Rroxscaffold_7G00213470
rosa_rugosa Rorug02G0070100 Rorug02G0070100 Rorug02G0070100 Rorug02G0128600 Rorug02G0128700 Rorug02G0128800 Rorug02G0128900 Rorug02G0248400 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337100 Rorug03G0337200 Rorug03G0337300 Rorug03G0337600 Rorug03G0337700 Rorug03G0337800 Rorug03G0337900 Rorug03G0337900 Rorug03G0338000 Rorug03G0338100 Rorug03G0338200 Rorug04G0233200.1 Rorug04G0297900 Rorug05G0233700 Rorug05G0316700 Rorug05G0530800 Rorug05G0530900
rosa_samantha Rh2AG307400 Rh2BG316500 Rh2DG331200 Rh4AG039300 Rh4AG039400 Rh4AG039600 Rh4AG039700 Rh4AG039900 Rh4AG040000 Rh4AG040100 Rh4AG040300 Rh4AG040500 Rh4AG040700 Rh4AG041000 Rh4AG041100 Rh4AG041600 Rh4AG041800 Rh4AG041900 Rh4AG352400 Rh4BG033200 Rh4BG034100 Rh4BG034300 Rh4BG034700 Rh4BG034800 Rh4BG035200 Rh4BG035400 Rh4BG036000 Rh4BG036200 Rh4BG036300 Rh4BG036500 Rh4BG036800 Rh4BG361700 Rh4CG042000 Rh4CG042200 Rh4CG042300 Rh4CG042500 Rh4CG042600 Rh4CG042800 Rh4CG043200 Rh4CG043400 Rh4CG043500 Rh4CG043700 Rh4CG043800 Rh4CG044200 Rh4CG044500 Rh4CG044700 Rh4CG177000 Rh4CG310600 Rh4CG376000 Rh4DG036300 Rh4DG036900 Rh4DG037000 Rh4DG037100 Rh4DG037200 Rh4DG037300 Rh4DG037500 Rh4DG037700 Rh4DG037800 Rh4DG037900 Rh4DG038000 Rh4DG038200 Rh4DG038500 Rh4DG038700 Rh4DG038900 Rh4DG159600 Rh5CG347900 Rh5DG409900 Rh6AG045300 Rh6AG045800 Rh6AG046000 Rh6AG046100 Rh6BG040600 Rh6BG040700 Rh6BG042200 Rh6BG042700 Rh6BG042800 Rh6DG035900 Rh6DG036100 Rh6DG036200
rosa_wichuraiana Rw0G010420 Rw2G024780 Rw4G003020 Rw4G003070 Rw4G003080 Rw4G003090 Rw4G003100 Rw4G003130 Rw4G003140 Rw4G003150 Rw4G003180 Rw4G003190 Rw4G003200 Rw4G003210 Rw4G003220 Rw4G003240 Rw4G003270 Rw4G025050 Rw4G030850 Rw6G003930 Rw6G004000 Rw6G004030 Rw6G004040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 580
AccIII TCCGGA 1 cut(s) 492
AciI CCGC 3 cut(s) 40, 575, 614
AclWI GGATC 8 cut(s) 195, 208, 341, 383, 453, 731, 953, 966
AcsI RAATTY 3 cut(s) 747, 821, 1152
AcuI CTGAAG 4 cut(s) 194, 317, 495, 948
AcvI CACGTG 1 cut(s) 156
AfaI GTAC 9 cut(s) 108, 114, 412, 620, 653, 667, 782, 1016, 1047
AfiI CCNNNNNNNGG 2 cut(s) 442, 1049
AflIII ACRYGT 1 cut(s) 115
AgsI TTSAA 6 cut(s) 64, 80, 821, 986, 1007, 1333
AjnI CCWGG 1 cut(s) 1048
AjuI GAANNNNNNNTTGG 2 cut(s) 921, 953
AluBI AGCT 7 cut(s) 295, 510, 526, 595, 935, 1055, 1087
AluI AGCT 7 cut(s) 295, 510, 526, 595, 935, 1055, 1087
Alw21I GWGCWC 1 cut(s) 1057
Alw26I GTCTC 2 cut(s) 143, 1318
AlwI GGATC 8 cut(s) 195, 208, 341, 383, 453, 731, 953, 966
AlwNI CAGNNNCTG 2 cut(s) 295, 926
Aor13HI TCCGGA 1 cut(s) 492
AoxI GGCC 3 cut(s) 300, 498, 1208
ApeKI GCWGC 3 cut(s) 289, 292, 595
ApoI RAATTY 3 cut(s) 747, 821, 1152
ArsI GACNNNNNNTTYG 8 cut(s) 309, 321, 341, 353, 716, 748, 792, 824
AseI ATTAAT 1 cut(s) 14
Asp700I GAANNNNTTC 1 cut(s) 302
AspLEI GCGC 2 cut(s) 580, 838
AspS9I GGNCC 4 cut(s) 98, 498, 1145, 1208
AsuC2I CCSGG 1 cut(s) 262
AsuHPI GGTGA 6 cut(s) 228, 250, 343, 541, 848, 1075
AvaII GGWCC 2 cut(s) 98, 1145
BamHI GGATCC 2 cut(s) 200, 958
BanII GRGCYC 2 cut(s) 846, 1057
BarI GAAGNNNNNNTAC 4 cut(s) 602, 634, 635, 667
BauI CACGAG 1 cut(s) 590
BbrPI CACGTG 1 cut(s) 156
BbsI GAAGAC 1 cut(s) 1332
Bbv12I GWGCWC 1 cut(s) 1057
BbvI GCAGC 3 cut(s) 301, 304, 582
BccI CCATC 5 cut(s) 550, 562, 628, 983, 1290
BciT130I CCWGG 1 cut(s) 1050
BciVI GTATCC 2 cut(s) 443, 534
BcnI CCSGG 1 cut(s) 262
BcoDI GTCTC 2 cut(s) 143, 1318
BfaI CTAG 6 cut(s) 228, 660, 1058, 1184, 1304, 1322
BfmI CTRYAG 2 cut(s) 287, 622
BfoI RGCGCY 1 cut(s) 839
BfuI GTATCC 2 cut(s) 443, 534
BisI GCNGC 4 cut(s) 290, 293, 576, 596
BlsI GCNGC 4 cut(s) 291, 294, 577, 597
BmcAI AGTACT 3 cut(s) 620, 653, 782
Bme1390I CCNGG 2 cut(s) 262, 1050
Bme18I GGWCC 2 cut(s) 98, 1145
BmgT120I GGNCC 4 cut(s) 98, 498, 1145, 1208
BmiI GGNNCC 2 cut(s) 202, 960
BmrFI CCNGG 2 cut(s) 262, 1050
BmrI ACTGGG 1 cut(s) 431
BmsI GCATC 3 cut(s) 331, 723, 1122
BmuI ACTGGG 1 cut(s) 431
BpiI GAAGAC 1 cut(s) 1332
BpmI CTGGAG 1 cut(s) 1071
BpuEI CTTGAG 3 cut(s) 199, 241, 1180
BpuMI CCSGG 1 cut(s) 262
BsaAI YACGTR 2 cut(s) 116, 156
BsaI GGTCTC 2 cut(s) 143, 1318
BsaJI CCNNGG 2 cut(s) 535, 599
BsaWI WCCGGW 1 cut(s) 492
BsaXI ACNNNNNCTCC 2 cut(s) 1044, 1074
Bsc4I CCNNNNNNNGG 2 cut(s) 442, 1049
Bse1I ACTGG 2 cut(s) 325, 437
BseAI TCCGGA 1 cut(s) 492
BseBI CCWGG 1 cut(s) 1050
BseDI CCNNGG 2 cut(s) 535, 599
BseGI GGATG 2 cut(s) 645, 975
BseLI CCNNNNNNNGG 2 cut(s) 442, 1049
BseMII CTCAG 3 cut(s) 138, 516, 822
BseNI ACTGG 2 cut(s) 325, 437
BseRI GAGGAG 3 cut(s) 575, 620, 1183
BseXI GCAGC 3 cut(s) 301, 304, 582
BsgI GTGCAG 1 cut(s) 127
Bsh1236I CGCG 1 cut(s) 580
Bsh1285I CGRYCG 1 cut(s) 409
BshFI GGCC 3 cut(s) 302, 500, 1210
BsiEI CGRYCG 1 cut(s) 409
BsiHKAI GWGCWC 1 cut(s) 1057
BsiSI CCGG 3 cut(s) 261, 345, 493
BsiWI CGTACG 1 cut(s) 410
BslI CCNNNNNNNGG 2 cut(s) 442, 1049
BsmAI GTCTC 2 cut(s) 143, 1318
BsnI GGCC 3 cut(s) 302, 500, 1210
Bso31I GGTCTC 2 cut(s) 143, 1318
Bsp1286I GDGCHC 2 cut(s) 846, 1057
Bsp13I TCCGGA 1 cut(s) 492
Bsp143I GATC 8 cut(s) 200, 333, 388, 445, 480, 736, 958, 988
Bsp19I CCATGG 1 cut(s) 535
BspACI CCGC 3 cut(s) 40, 575, 614
BspANI GGCC 3 cut(s) 302, 500, 1210
BspCNI CTCAG 3 cut(s) 139, 515, 823
BspEI TCCGGA 1 cut(s) 492
BspFNI CGCG 1 cut(s) 580
BspLI GGNNCC 2 cut(s) 202, 960
BspMAI CTGCAG 1 cut(s) 291
BspPI GGATC 8 cut(s) 195, 208, 341, 383, 453, 731, 953, 966
BspTNI GGTCTC 2 cut(s) 143, 1318
BsrI ACTGG 2 cut(s) 325, 437
BssECI CCNNGG 2 cut(s) 535, 599
BssMI GATC 8 cut(s) 200, 333, 388, 445, 480, 736, 958, 988
BssSI CACGAG 1 cut(s) 590
BssT1I CCWWGG 1 cut(s) 535
Bst2BI CACGAG 1 cut(s) 590
Bst2UI CCWGG 1 cut(s) 1050
Bst4CI ACNGT 4 cut(s) 410, 415, 1264, 1338
Bst6I CTCTTC 1 cut(s) 213
BstBAI YACGTR 2 cut(s) 116, 156
BstC8I GCNNGC 1 cut(s) 471
BstDEI CTNAG 5 cut(s) 147, 502, 786, 831, 896
BstDSI CCRYGG 1 cut(s) 535
BstEII GGTNACC 1 cut(s) 256
BstF5I GGATG 2 cut(s) 645, 975
BstFNI CGCG 1 cut(s) 580
BstH2I RGCGCY 1 cut(s) 839
BstHHI GCGC 2 cut(s) 580, 838
BstKTI GATC 8 cut(s) 203, 336, 391, 448, 483, 739, 961, 991
BstMAI GTCTC 2 cut(s) 143, 1318
BstMBI GATC 8 cut(s) 200, 333, 388, 445, 480, 736, 958, 988
BstMCI CGRYCG 1 cut(s) 409
BstMWI GCNNNNNNNGC 1 cut(s) 289
BstNI CCWGG 1 cut(s) 1050
BstNSI RCATGY 2 cut(s) 137, 1167
BstPI GGTNACC 1 cut(s) 256
BstSCI CCNGG 2 cut(s) 260, 1048
BstSFI CTRYAG 2 cut(s) 287, 622
BstUI CGCG 1 cut(s) 580
BstV1I GCAGC 3 cut(s) 301, 304, 582
BstV2I GAAGAC 1 cut(s) 1332
BstX2I RGATCY 4 cut(s) 200, 388, 445, 958
BstYI RGATCY 4 cut(s) 200, 388, 445, 958
BsuI GTATCC 2 cut(s) 443, 534
BsuRI GGCC 3 cut(s) 302, 500, 1210
BtgI CCRYGG 1 cut(s) 535
BtsCI GGATG 2 cut(s) 645, 975
BtsI GCAGTG 3 cut(s) 139, 716, 942
BtsIMutI CAGTG 7 cut(s) 139, 144, 444, 716, 942, 1031, 1269
Cac8I GCNNGC 1 cut(s) 471
CaiI CAGNNNCTG 2 cut(s) 295, 926
CfoI GCGC 2 cut(s) 580, 838
Cfr13I GGNCC 4 cut(s) 98, 498, 1145, 1208
CseI GACGC 1 cut(s) 272
Csp6I GTAC 9 cut(s) 107, 113, 411, 619, 652, 666, 781, 1015, 1046
CspCI CAANNNNNGTGG 2 cut(s) 1007, 1042
CviAII CATG 5 cut(s) 134, 536, 670, 915, 1164
CviQI GTAC 9 cut(s) 107, 113, 411, 619, 652, 666, 781, 1015, 1046
DdeI CTNAG 5 cut(s) 147, 502, 786, 831, 896
DpnI GATC 8 cut(s) 202, 335, 390, 447, 482, 738, 960, 990
DpnII GATC 8 cut(s) 200, 333, 388, 445, 480, 736, 958, 988
Eam1104I CTCTTC 1 cut(s) 213
EarI CTCTTC 1 cut(s) 213
EciI GGCGGA 1 cut(s) 629
Ecl136II GAGCTC 1 cut(s) 1055
Eco130I CCWWGG 1 cut(s) 535
Eco147I AGGCCT 1 cut(s) 302
Eco24I GRGCYC 2 cut(s) 846, 1057
Eco31I GGTCTC 2 cut(s) 143, 1318
Eco32I GATATC 1 cut(s) 874
Eco47I GGWCC 2 cut(s) 98, 1145
Eco53kI GAGCTC 1 cut(s) 1055
Eco57I CTGAAG 4 cut(s) 194, 317, 495, 948
Eco72I CACGTG 1 cut(s) 156
Eco91I GGTNACC 1 cut(s) 256
EcoICRI GAGCTC 1 cut(s) 1055
EcoO109I RGGNCCY 1 cut(s) 498
EcoO65I GGTNACC 1 cut(s) 256
EcoRII CCWGG 1 cut(s) 1048
EcoRV GATATC 1 cut(s) 874
EcoT14I CCWWGG 1 cut(s) 535
EcoT38I GRGCYC 2 cut(s) 846, 1057
ErhI CCWWGG 1 cut(s) 535
FaeI CATG 5 cut(s) 137, 539, 673, 918, 1167
FatI CATG 5 cut(s) 133, 535, 669, 914, 1163
FauI CCCGC 1 cut(s) 33
FauNDI CATATG 1 cut(s) 888
Fnu4HI GCNGC 4 cut(s) 290, 293, 576, 596
FokI GGATG 2 cut(s) 652, 962
FriOI GRGCYC 2 cut(s) 846, 1057
Fsp4HI GCNGC 4 cut(s) 290, 293, 576, 596
FspBI CTAG 6 cut(s) 228, 660, 1058, 1184, 1304, 1322
GlaI GCGC 2 cut(s) 579, 837
GluI GCNGC 4 cut(s) 290, 293, 576, 596
GsuI CTGGAG 1 cut(s) 1071
HaeII RGCGCY 1 cut(s) 839
HaeIII GGCC 3 cut(s) 302, 500, 1210
HapII CCGG 3 cut(s) 261, 345, 493
HgaI GACGC 1 cut(s) 272
HhaI GCGC 2 cut(s) 580, 838
Hin1II CATG 5 cut(s) 137, 539, 673, 918, 1167
Hin6I GCGC 2 cut(s) 578, 836
HinP1I GCGC 2 cut(s) 578, 836
HincII GTYRAC 1 cut(s) 1224
HindII GTYRAC 1 cut(s) 1224
HinfI GANTC 5 cut(s) 60, 223, 311, 348, 892
HpaI GTTAAC 1 cut(s) 1224
HpaII CCGG 3 cut(s) 261, 345, 493
HphI GGTGA 6 cut(s) 228, 250, 343, 541, 848, 1075
Hpy166II GTNNAC 5 cut(s) 532, 796, 1001, 1066, 1224
Hpy188I TCNGA 6 cut(s) 73, 505, 832, 958, 1073, 1231
Hpy188III TCNNGA 6 cut(s) 220, 493, 590, 986, 1197, 1253
Hpy8I GTNNAC 5 cut(s) 532, 796, 1001, 1066, 1224
Hpy99I CGWCG 3 cut(s) 311, 341, 401
HpyAV CCTTC 9 cut(s) 89, 292, 313, 459, 604, 637, 691, 1136, 1188
HpyCH4III ACNGT 4 cut(s) 410, 415, 1264, 1338
HpyCH4IV ACGT 3 cut(s) 115, 155, 792
HpyCH4V TGCA 6 cut(s) 137, 144, 289, 709, 714, 762
HpyF10VI GCNNNNNNNGC 1 cut(s) 289
HpyF3I CTNAG 5 cut(s) 147, 502, 786, 831, 896
HpySE526I ACGT 3 cut(s) 115, 155, 792
Hsp92II CATG 5 cut(s) 137, 539, 673, 918, 1167
HspAI GCGC 2 cut(s) 578, 836
Kpn2I TCCGGA 1 cut(s) 492
KspAI GTTAAC 1 cut(s) 1224
Kzo9I GATC 8 cut(s) 200, 333, 388, 445, 480, 736, 958, 988
LmnI GCTCC 1 cut(s) 1052
Lsp1109I GCAGC 3 cut(s) 301, 304, 582
LweI GCATC 3 cut(s) 331, 723, 1122
MaeI CTAG 6 cut(s) 228, 660, 1058, 1184, 1304, 1322
MaeII ACGT 3 cut(s) 115, 155, 792
MaeIII GTNAC 3 cut(s) 256, 722, 808
MalI GATC 8 cut(s) 202, 335, 390, 447, 482, 738, 960, 990
MboI GATC 8 cut(s) 200, 333, 388, 445, 480, 736, 958, 988
MboII GAAGA 6 cut(s) 200, 204, 511, 1031, 1244, 1337
MflI RGATCY 4 cut(s) 200, 388, 445, 958
MhlI GDGCHC 2 cut(s) 846, 1057
MluCI AATT 9 cut(s) 185, 366, 747, 800, 821, 964, 993, 1152, 1245
MlyI GAGTC 2 cut(s) 232, 305
MroI TCCGGA 1 cut(s) 492
MroXI GAANNNNTTC 1 cut(s) 302
MseI TTAA 4 cut(s) 5, 14, 188, 1223
MslI CAYNNNNRTG 1 cut(s) 251
MspA1I CMGCKG 2 cut(s) 295, 526
MspI CCGG 3 cut(s) 261, 345, 493
MspR9I CCNGG 2 cut(s) 262, 1050
MvaI CCWGG 1 cut(s) 1050
MvnI CGCG 1 cut(s) 580
MwoI GCNNNNNNNGC 1 cut(s) 289
NciI CCSGG 1 cut(s) 262
NcoI CCATGG 1 cut(s) 535
NdeI CATATG 1 cut(s) 888
NdeII GATC 8 cut(s) 200, 333, 388, 445, 480, 736, 958, 988
NlaIII CATG 5 cut(s) 137, 539, 673, 918, 1167
NlaIV GGNNCC 2 cut(s) 202, 960
NmeAIII GCCGAG 1 cut(s) 624
NmuCI GTSAC 3 cut(s) 256, 722, 808
NspI RCATGY 2 cut(s) 137, 1167
PceI AGGCCT 1 cut(s) 302
PcsI WCGNNNNNNNCGW 1 cut(s) 723
PdmI GAANNNNTTC 1 cut(s) 302
PfeI GAWTC 3 cut(s) 60, 348, 892
Pfl23II CGTACG 1 cut(s) 410
PflFI GACNNNGTC 1 cut(s) 488
PkrI GCNGC 4 cut(s) 291, 294, 577, 597
PleI GAGTC 2 cut(s) 231, 305
PmaCI CACGTG 1 cut(s) 156
PmlI CACGTG 1 cut(s) 156
PpsI GAGTC 2 cut(s) 231, 305
Ppu21I YACGTR 2 cut(s) 116, 156
PshBI ATTAAT 1 cut(s) 14
Psp124BI GAGCTC 1 cut(s) 1057
Psp6I CCWGG 1 cut(s) 1048
PspCI CACGTG 1 cut(s) 156
PspEI GGTNACC 1 cut(s) 256
PspGI CCWGG 1 cut(s) 1048
PspLI CGTACG 1 cut(s) 410
PspN4I GGNNCC 2 cut(s) 202, 960
PspPI GGNCC 4 cut(s) 98, 498, 1145, 1208
PstI CTGCAG 1 cut(s) 291
PstNI CAGNNNCTG 2 cut(s) 295, 926
PsuI RGATCY 4 cut(s) 200, 388, 445, 958
PsyI GACNNNGTC 1 cut(s) 488
PvuII CAGCTG 2 cut(s) 295, 526
RsaI GTAC 9 cut(s) 108, 114, 412, 620, 653, 667, 782, 1016, 1047
RsaNI GTAC 9 cut(s) 107, 113, 411, 619, 652, 666, 781, 1015, 1046
RseI CAYNNNNRTG 1 cut(s) 251
SacI GAGCTC 1 cut(s) 1057
SaqAI TTAA 4 cut(s) 5, 14, 188, 1223
SatI GCNGC 4 cut(s) 290, 293, 576, 596
Sau3AI GATC 8 cut(s) 200, 333, 388, 445, 480, 736, 958, 988
Sau96I GGNCC 4 cut(s) 98, 498, 1145, 1208
ScaI AGTACT 3 cut(s) 620, 653, 782
SchI GAGTC 2 cut(s) 232, 305
ScrFI CCNGG 2 cut(s) 262, 1050
SduI GDGCHC 2 cut(s) 846, 1057
SfaNI GCATC 3 cut(s) 331, 723, 1122
SfcI CTRYAG 2 cut(s) 287, 622
SinI GGWCC 2 cut(s) 98, 1145
SmiMI CAYNNNNRTG 1 cut(s) 251
SmlI CTYRAG 3 cut(s) 178, 220, 1195
SmoI CTYRAG 3 cut(s) 178, 220, 1195
Sse9I AATT 9 cut(s) 185, 366, 747, 800, 821, 964, 993, 1152, 1245
SseBI AGGCCT 1 cut(s) 302
SsiI CCGC 3 cut(s) 40, 575, 614
SspMI CTAG 6 cut(s) 228, 660, 1058, 1184, 1304, 1322
SstI GAGCTC 1 cut(s) 1057
StuI AGGCCT 1 cut(s) 302
StyD4I CCNGG 2 cut(s) 260, 1048
StyI CCWWGG 1 cut(s) 535
TaaI ACNGT 4 cut(s) 410, 415, 1264, 1338
TaiI ACGT 3 cut(s) 118, 158, 795
TaqI TCGA 3 cut(s) 306, 339, 483
TasI AATT 9 cut(s) 185, 366, 747, 800, 821, 964, 993, 1152, 1245
TatI WGTACW 4 cut(s) 106, 618, 651, 780
TauI GCSGC 1 cut(s) 578
TfiI GAWTC 3 cut(s) 60, 348, 892
Tru1I TTAA 4 cut(s) 5, 14, 188, 1223
Tru9I TTAA 4 cut(s) 5, 14, 188, 1223
TscAI CASTG 7 cut(s) 146, 151, 444, 716, 949, 1031, 1269
TseFI GTSAC 3 cut(s) 256, 722, 808
TseI GCWGC 3 cut(s) 289, 292, 595
Tsp45I GTSAC 3 cut(s) 256, 722, 808
TspDTI ATGAA 4 cut(s) 235, 656, 1096, 1155
TspGWI ACGGA 4 cut(s) 213, 365, 385, 477
TspRI CASTG 7 cut(s) 146, 151, 444, 716, 949, 1031, 1269
Tth111I GACNNNGTC 1 cut(s) 488
VpaK11BI GGWCC 2 cut(s) 98, 1145
VspI ATTAAT 1 cut(s) 14
XapI RAATTY 3 cut(s) 747, 821, 1152
XceI RCATGY 2 cut(s) 137, 1167
XcmI CCANNNNNNNNNTGG 1 cut(s) 553
XmnI GAANNNNTTC 1 cut(s) 302
XspI CTAG 6 cut(s) 228, 660, 1058, 1184, 1304, 1322
ZrmI AGTACT 3 cut(s) 620, 653, 782
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.