Rh4AG041100

Belongs to the iron ascorbate-dependent oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
OG0000054
Physical Location & Seq
Forward (+)
8594445 .. 8599981
5537 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG041100.1

Sequence Viewer

Length: 1074 bp
ATGAATATGGTCACCGGGAAATCAAGCGACCCAGAGCGTCTGCAGCAGCTGAAGGCCTTCGACGACTCCAGAGCTGGTGTCAAAGGCATCGTCGATGCCGGAATCACCAAACTCCCACCAATTTTCGTCCGTCCAAAGAAAGATCCCTCCGTCGTCGGCAGGGCCGGTCCTGAGCTTTTTGATGCCCAGGGCGAAATTTTGCGTGCTGAGGTGATCGACCAAGTCCGGAGGGCAGCAGAGAGCTATGGGTTCTTCCAGGTAGTGAACCATGGGATGCCCGAGAGAGTGATGGAGGAGATGATAGAGGCGGCGCGTGTGTTTCACGAGCTGCCGAGGGAGGAGAAGGCGAAGTACTATGGTAGGGAGATGGGGATGAAGGTCAAGTACTTCTCTGGCAGTACCATGTATAAGTTGATGTTTGCTGATTGGAAGGACACTTTGCAGTGTAACATAAGTGACGAGCTGTTTGATCCTCAAGCAATTCCTCTCGTTTGCAGAGATATAACTATGGGGTACTCTAAACACGTTCACCAGTTAGGTGTCACCTTGTTTGAATTTCTATCTGAGGCGCTTAGGCTCAAACCTGATCACCTCAAAAACTTTGATAGCACAATGGGGCATATGGTTCTTAGTCATTACTATCCACCATGCCCCGAGCCTGAAGTGACTATTGGCACCGTCGAACACTCAGATCCTGATTTTATGACCATCCTACTTCAAGACCAAATCGGTGGACTTCAAGTTTTGTACCAAAATCAGTGGATTGATGTTCCTCCTCTACCTGGAGCTCTAGTGGTGAATATCGGAGATTTCTTGCAGCTGATCTCAAACAATAAGTTCATAAGCGTTAATCATAGAGTATTGGCTAAAAATGAAGGTCCAAGAATTTCCGTGGCATGTTTTTTTAGACCTTCACTAGAAAACTCCTCAAGATTATATGGACCAATCAAAGAGTTAACATCAGAAGAAAAACCTCCAGTTTATCAGGAAACAACAGTGAAAGATTATGTTATGTGCCACTACAAAAGTTGGGAACTAAATGGGGTCTCCGGGCTAGAAGACTTGAAGCTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2OG-FeII_Oxy DIOX_N

Protein Analysis

357

Amino Acids

40.48

Weight (kDa)

5.64

Isoelectric Point (pI)

41.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 68 - 158 4.1e-18 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 207 - 304 1.9e-33 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000054)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03400 AT1G03400 AT1G03410 AT1G03410 AT1G04350 AT1G06620 AT1G06620 AT1G06640 AT1G06640 AT1G06640 AT1G06645 AT1G06650 AT1G06650 AT2G25450 AT2G30830 AT2G30840 AT2G30840 AT2G30840 AT3G61400 AT3G61400 AT5G43440 AT5G43440 AT5G43450 AT5G43450 AT5G59530 AT5G59540 AT5G59540
fragaria_vesca FvH4_2g03190 FvH4_2g03220 FvH4_3g07861 FvH4_3g31880 FvH4_3g31880 FvH4_3g31880 FvH4_4g03241 FvH4_4g03250 FvH4_4g03251 FvH4_4g03260 FvH4_4g03300 FvH4_4g03301 FvH4_4g03301 FvH4_4g03301 FvH4_4g03302 FvH4_4g03303 FvH4_4g03303 FvH4_4g03304 FvH4_4g03305 FvH4_4g03323 FvH4_4g03323 FvH4_5g19290 FvH4_5g19290 FvH4_5g19290 FvH4_5g19291 FvH4_5g19291 FvH4_5g19310 FvH4_5g19310 FvH4_5g19310 FvH4_5g19320 FvH4_5g19321 FvH4_5g19321 FvH4_5g19321 FvH4_7g31470
malus_domestica MD00G1220300.v1.1 MD02G1050800.v1.1 MD02G1053200.v1.1 MD02G1053300.v1.1 MD02G1054900.v1.1 MD03G1032300.v1.1 MD03G1245000.v1.1 MD03G1245300.v1.1 MD05G1014200.v1.1 MD13G1210900.v1.1 MD13G1211000.v1.1 MD13G1211100.v1.1 MD13G1211200.v1.1 MD13G1211800.v1.1 MD13G1211900.v1.1 MD13G1212000.v1.1 MD16G1214100.v1.1 MD16G1214300.v1.1 MD16G1214400.v1.1 MD16G1214600.v1.1 MD16G1215000.v1.1 MD16G1215200.v1.1 MD16G1215300.v1.1 MD16G1215500.v1.1 MD16G1271000.v1.1
prunus_persica Prupe.1G035500_v2.0.a1 Prupe.1G035700_v2.0.a1 Prupe.1G035800_v2.0.a1 Prupe.1G035900_v2.0.a1 Prupe.1G036000_v2.0.a1 Prupe.1G036100_v2.0.a1 Prupe.1G036200_v2.0.a1 Prupe.1G036400_v2.0.a1 Prupe.1G036500_v2.0.a1 Prupe.1G036600_v2.0.a1 Prupe.1G036700_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G191000_v2.0.a1 Prupe.1G191100_v2.0.a1
pyrus_communis pycom13g18340 pycom13g18350 pycom13g18380 pycom16g17990 pycom16g18010 pycom16g18020
rosa_chinensis RchiOBHm_Chr2g0124051 RchiOBHm_Chr4g0391811 RchiOBHm_Chr4g0391931 RchiOBHm_Chr4g0391961 RchiOBHm_Chr4g0391971 RchiOBHm_Chr4g0391981 RchiOBHm_Chr4g0391991 RchiOBHm_Chr4g0392031 RchiOBHm_Chr4g0392051 RchiOBHm_Chr4g0392061 RchiOBHm_Chr4g0392071 RchiOBHm_Chr4g0392081 RchiOBHm_Chr4g0392091 RchiOBHm_Chr4g0392111 RchiOBHm_Chr4g0392121 RchiOBHm_Chr4g0392131 RchiOBHm_Chr4g0392141 RchiOBHm_Chr4g0392151 RchiOBHm_Chr4g0392211 RchiOBHm_Chr4g0392251 RchiOBHm_Chr4g0392261 RchiOBHm_Chr4g0392301 RchiOBHm_Chr4g0392311 RchiOBHm_Chr4g0392341 RchiOBHm_Chr4g0409221 RchiOBHm_Chr4g0410991 RchiOBHm_Chr4g0429131 RchiOBHm_Chr4g0437051 RchiOBHm_Chr5g0038681 RchiOBHm_Chr5g0047071 RchiOBHm_Chr5g0058651 RchiOBHm_Chr6g0248121 RchiOBHm_Chr6g0248141 RchiOBHm_Chr6g0248291 RchiOBHm_Chr6g0248341 RchiOBHm_Chr6g0248351
rosa_laevigata RLG00000006473 RLG00000006475 RLG00000006667 RLG00000007095 RLG00000009819 RLG00000009820 RLG00000009821 RLG00000009822 RLG00000009825 RLG00000009826 RLG00000009830 RLG00000009831 RLG00000009832 RLG00000009833 RLG00000009834 RLG00000009835 RLG00000009837 RLG00000009838 RLG00000009839 RLG00000009841 RLG00000009842 RLG00000009844 RLG00000009845 RLG00000009846 RLG00000009847 RLG00000009848 RLG00000009849 RLG00000015160 RLG00000015161 RLG00000017791 RLG00000018779 RLG00000034461 RLG00000035237
rosa_multiflora Rmu_co8253791.1_g000001 Rmu_co8348827.1_g000001 Rmu_co8400489.1_g000001 Rmu_sc0000383.1_g000003 Rmu_sc0000383.1_g000005 Rmu_sc0000383.1_g000026 Rmu_sc0000846.1_g000012 Rmu_sc0001231.1_g000013 Rmu_sc0001231.1_g000026 Rmu_sc0001231.1_g000028 Rmu_sc0001800.1_g000027 Rmu_sc0003436.1_g000022 Rmu_sc0004104.1_g000004 Rmu_sc0004295.1_g000021 Rmu_sc0004295.1_g000031 Rmu_sc0004928.1_g000002 Rmu_sc0004928.1_g000008 Rmu_sc0004928.1_g000011 Rmu_sc0004928.1_g000027 Rmu_sc0004977.1_g000007 Rmu_sc0005018.1_g000002 Rmu_sc0005091.1_g000026 Rmu_sc0005091.1_g000032 Rmu_sc0005091.1_g000033 Rmu_sc0005817.1_g000003 Rmu_sc0005817.1_g000008 Rmu_sc0012482.1_g000002 Rmu_sc0014210.1_g000001 Rmu_sc0016150.1_g000001 Rmu_sc0029701.1_g000002 Rmu_sc0036585.1_g000001 Rmu_sc0037489.1_g000002
rosa_roxburghii Rroxscaffold_1G00021790 Rroxscaffold_1G00021800 Rroxscaffold_1G00034360 Rroxscaffold_2G00120130 Rroxscaffold_5G00337210 Rroxscaffold_5G00337220 Rroxscaffold_5G00337230 Rroxscaffold_5G00337250 Rroxscaffold_5G00337260 Rroxscaffold_5G00337270 Rroxscaffold_5G00337300 Rroxscaffold_5G00337310 Rroxscaffold_5G00337320 Rroxscaffold_5G00337330 Rroxscaffold_5G00337350 Rroxscaffold_5G00337370 Rroxscaffold_5G00337390 Rroxscaffold_5G00337400 Rroxscaffold_5G00337420 Rroxscaffold_5G00337430 Rroxscaffold_5G00337450 Rroxscaffold_5G00337470 Rroxscaffold_5G00337480 Rroxscaffold_5G00337520 Rroxscaffold_5G00378130 Rroxscaffold_6G00397800 Rroxscaffold_7G00213320 Rroxscaffold_7G00213390 Rroxscaffold_7G00213420 Rroxscaffold_7G00213470
rosa_rugosa Rorug02G0070100 Rorug02G0070100 Rorug02G0070100 Rorug02G0128600 Rorug02G0128700 Rorug02G0128800 Rorug02G0128900 Rorug02G0248400 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337100 Rorug03G0337200 Rorug03G0337300 Rorug03G0337600 Rorug03G0337700 Rorug03G0337800 Rorug03G0337900 Rorug03G0337900 Rorug03G0338000 Rorug03G0338100 Rorug03G0338200 Rorug04G0233200.1 Rorug04G0297900 Rorug05G0233700 Rorug05G0316700 Rorug05G0530800 Rorug05G0530900
rosa_samantha Rh2AG307400 Rh2BG316500 Rh2DG331200 Rh4AG039300 Rh4AG039400 Rh4AG039600 Rh4AG039700 Rh4AG039900 Rh4AG040000 Rh4AG040100 Rh4AG040300 Rh4AG040500 Rh4AG040700 Rh4AG041000 Rh4AG041100 Rh4AG041600 Rh4AG041800 Rh4AG041900 Rh4AG352400 Rh4BG033200 Rh4BG034100 Rh4BG034300 Rh4BG034700 Rh4BG034800 Rh4BG035200 Rh4BG035400 Rh4BG036000 Rh4BG036200 Rh4BG036300 Rh4BG036500 Rh4BG036800 Rh4BG361700 Rh4CG042000 Rh4CG042200 Rh4CG042300 Rh4CG042500 Rh4CG042600 Rh4CG042800 Rh4CG043200 Rh4CG043400 Rh4CG043500 Rh4CG043700 Rh4CG043800 Rh4CG044200 Rh4CG044500 Rh4CG044700 Rh4CG177000 Rh4CG310600 Rh4CG376000 Rh4DG036300 Rh4DG036900 Rh4DG037000 Rh4DG037100 Rh4DG037200 Rh4DG037300 Rh4DG037500 Rh4DG037700 Rh4DG037800 Rh4DG037900 Rh4DG038000 Rh4DG038200 Rh4DG038500 Rh4DG038700 Rh4DG038900 Rh4DG159600 Rh5CG347900 Rh5DG409900 Rh6AG045300 Rh6AG045800 Rh6AG046000 Rh6AG046100 Rh6BG040600 Rh6BG040700 Rh6BG042200 Rh6BG042700 Rh6BG042800 Rh6DG035900 Rh6DG036100 Rh6DG036200
rosa_wichuraiana Rw0G010420 Rw2G024780 Rw4G003020 Rw4G003070 Rw4G003080 Rw4G003090 Rw4G003100 Rw4G003130 Rw4G003140 Rw4G003150 Rw4G003180 Rw4G003190 Rw4G003200 Rw4G003210 Rw4G003220 Rw4G003240 Rw4G003270 Rw4G025050 Rw4G030850 Rw6G003930 Rw6G004000 Rw6G004030 Rw6G004040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 674
AccII CGCG 1 cut(s) 313
AccIII TCCGGA 1 cut(s) 225
AciI CCGC 1 cut(s) 308
AclWI GGATC 3 cut(s) 137, 464, 686
AcsI RAATTY 3 cut(s) 195, 554, 885
AcuI CTGAAG 2 cut(s) 71, 681
AfaI GTAC 5 cut(s) 353, 386, 400, 515, 749
AfiI CCNNNNNNNGG 1 cut(s) 782
AflIII ACRYGT 1 cut(s) 523
AgsI TTSAA 4 cut(s) 554, 719, 740, 1066
AjnI CCWGG 3 cut(s) 186, 255, 781
AjuI GAANNNNNNNTTGG 2 cut(s) 654, 686
AluBI AGCT 9 cut(s) 49, 74, 175, 243, 328, 463, 788, 820, 1069
AluI AGCT 9 cut(s) 49, 74, 175, 243, 328, 463, 788, 820, 1069
Alw21I GWGCWC 1 cut(s) 790
Alw26I GTCTC 1 cut(s) 1051
AlwI GGATC 3 cut(s) 137, 464, 686
AlwNI CAGNNNCTG 2 cut(s) 49, 695
Ama87I CYCGRG 2 cut(s) 278, 653
Aor13HI TCCGGA 1 cut(s) 225
AoxI GGCC 2 cut(s) 54, 162
ApeKI GCWGC 5 cut(s) 43, 46, 233, 328, 817
ApoI RAATTY 3 cut(s) 195, 554, 885
ArsI GACNNNNNNTTYG 4 cut(s) 75, 107, 449, 481
Asp700I GAANNNNTTC 1 cut(s) 56
AspLEI GCGC 2 cut(s) 313, 571
AspS9I GGNCC 4 cut(s) 162, 167, 878, 941
AsuC2I CCSGG 2 cut(s) 16, 1051
AsuHPI GGTGA 7 cut(s) 4, 97, 223, 521, 535, 581, 808
AvaI CYCGRG 2 cut(s) 278, 653
AvaII GGWCC 3 cut(s) 167, 878, 941
BanI GGYRCC 1 cut(s) 674
BanII GRGCYC 1 cut(s) 790
BarI GAAGNNNNNNTAC 4 cut(s) 335, 367, 368, 400
BauI CACGAG 1 cut(s) 323
BbsI GAAGAC 1 cut(s) 1065
Bbv12I GWGCWC 1 cut(s) 790
BbvCI CCTCAGC 1 cut(s) 207
BbvI GCAGC 5 cut(s) 55, 58, 245, 315, 829
BccI CCATC 3 cut(s) 283, 361, 716
BciT130I CCWGG 3 cut(s) 188, 257, 783
BclI TGATCA 1 cut(s) 586
BcnI CCSGG 2 cut(s) 16, 1051
BcoDI GTCTC 1 cut(s) 1051
BfaI CTAG 3 cut(s) 791, 917, 1055
BfmI CTRYAG 2 cut(s) 41, 1070
BfoI RGCGCY 1 cut(s) 572
BisI GCNGC 6 cut(s) 44, 47, 234, 309, 329, 818
BlsI GCNGC 6 cut(s) 45, 48, 235, 310, 330, 819
BmcAI AGTACT 2 cut(s) 353, 386
Bme1390I CCNGG 5 cut(s) 16, 188, 257, 783, 1051
Bme18I GGWCC 3 cut(s) 167, 878, 941
BmeT110I CYCGRG 2 cut(s) 278, 653
BmgT120I GGNCC 4 cut(s) 162, 167, 878, 941
BmiI GGNNCC 1 cut(s) 676
BmrFI CCNGG 5 cut(s) 16, 188, 257, 783, 1051
BmsI GCATC 4 cut(s) 85, 96, 172, 264
BpiI GAAGAC 1 cut(s) 1065
BpmI CTGGAG 3 cut(s) 52, 804, 960
Bpu10I CCTNAGC 3 cut(s) 171, 207, 572
BpuEI CTTGAG 2 cut(s) 459, 913
BpuMI CCSGG 2 cut(s) 16, 1051
BsaI GGTCTC 1 cut(s) 1051
BsaJI CCNNGG 5 cut(s) 186, 187, 268, 332, 891
BsaWI WCCGGW 1 cut(s) 225
BsaXI ACNNNNNCTCC 2 cut(s) 777, 807
Bsc4I CCNNNNNNNGG 1 cut(s) 782
Bse118I RCCGGY 1 cut(s) 164
Bse1I ACTGG 2 cut(s) 532, 977
BseAI TCCGGA 1 cut(s) 225
BseBI CCWGG 3 cut(s) 188, 257, 783
BseDI CCNNGG 5 cut(s) 186, 187, 268, 332, 891
BseGI GGATG 3 cut(s) 279, 378, 708
BseLI CCNNNNNNNGG 1 cut(s) 782
BseMII CTCAG 4 cut(s) 162, 198, 555, 702
BseNI ACTGG 2 cut(s) 532, 977
BseRI GAGGAG 4 cut(s) 308, 353, 765, 916
BseXI GCAGC 5 cut(s) 55, 58, 245, 315, 829
Bsh1236I CGCG 1 cut(s) 313
BshFI GGCC 2 cut(s) 56, 164
BshNI GGYRCC 1 cut(s) 674
BsiHKAI GWGCWC 1 cut(s) 790
BsiHKCI CYCGRG 2 cut(s) 278, 653
BsiSI CCGG 5 cut(s) 15, 99, 165, 226, 1050
BslI CCNNNNNNNGG 1 cut(s) 782
BsmAI GTCTC 1 cut(s) 1051
BsnI GGCC 2 cut(s) 56, 164
Bso31I GGTCTC 1 cut(s) 1051
BsoBI CYCGRG 2 cut(s) 278, 653
Bsp1286I GDGCHC 1 cut(s) 790
Bsp13I TCCGGA 1 cut(s) 225
Bsp143I GATC 6 cut(s) 142, 213, 469, 586, 691, 822
Bsp19I CCATGG 1 cut(s) 268
BspACI CCGC 1 cut(s) 308
BspANI GGCC 2 cut(s) 56, 164
BspCNI CTCAG 4 cut(s) 163, 199, 556, 701
BspEI TCCGGA 1 cut(s) 225
BspFNI CGCG 1 cut(s) 313
BspLI GGNNCC 1 cut(s) 676
BspMAI CTGCAG 1 cut(s) 45
BspPI GGATC 3 cut(s) 137, 464, 686
BspT107I GGYRCC 1 cut(s) 674
BspTNI GGTCTC 1 cut(s) 1051
BsrFI RCCGGY 1 cut(s) 164
BsrI ACTGG 2 cut(s) 532, 977
BssAI RCCGGY 1 cut(s) 164
BssECI CCNNGG 5 cut(s) 186, 187, 268, 332, 891
BssMI GATC 6 cut(s) 142, 213, 469, 586, 691, 822
BssSI CACGAG 1 cut(s) 323
BssT1I CCWWGG 1 cut(s) 268
Bst2BI CACGAG 1 cut(s) 323
Bst2UI CCWGG 3 cut(s) 188, 257, 783
Bst4CI ACNGT 2 cut(s) 679, 997
BstC8I GCNNGC 1 cut(s) 204
BstDEI CTNAG 6 cut(s) 171, 207, 564, 572, 629, 688
BstDSI CCRYGG 2 cut(s) 268, 891
BstEII GGTNACC 1 cut(s) 10
BstF5I GGATG 3 cut(s) 279, 378, 708
BstFNI CGCG 1 cut(s) 313
BstH2I RGCGCY 1 cut(s) 572
BstHHI GCGC 2 cut(s) 313, 571
BstKTI GATC 6 cut(s) 145, 216, 472, 589, 694, 825
BstMAI GTCTC 1 cut(s) 1051
BstMBI GATC 6 cut(s) 142, 213, 469, 586, 691, 822
BstMWI GCNNNNNNNGC 1 cut(s) 43
BstNI CCWGG 3 cut(s) 188, 257, 783
BstNSI RCATGY 1 cut(s) 900
BstPI GGTNACC 1 cut(s) 10
BstSCI CCNGG 5 cut(s) 14, 186, 255, 781, 1049
BstSFI CTRYAG 2 cut(s) 41, 1070
BstUI CGCG 1 cut(s) 313
BstV1I GCAGC 5 cut(s) 55, 58, 245, 315, 829
BstV2I GAAGAC 1 cut(s) 1065
BstX2I RGATCY 2 cut(s) 142, 691
BstXI CCANNNNNNTGG 1 cut(s) 731
BstYI RGATCY 2 cut(s) 142, 691
BsuRI GGCC 2 cut(s) 56, 164
BtgI CCRYGG 2 cut(s) 268, 891
BtsCI GGATG 3 cut(s) 279, 378, 708
BtsI GCAGTG 1 cut(s) 449
BtsIMutI CAGTG 3 cut(s) 449, 764, 1002
Cac8I GCNNGC 1 cut(s) 204
CaiI CAGNNNCTG 2 cut(s) 49, 695
CfoI GCGC 2 cut(s) 313, 571
Cfr10I RCCGGY 1 cut(s) 164
Cfr13I GGNCC 4 cut(s) 162, 167, 878, 941
CseI GACGC 1 cut(s) 26
Csp6I GTAC 5 cut(s) 352, 385, 399, 514, 748
CspCI CAANNNNNGTGG 2 cut(s) 740, 775
CviAII CATG 4 cut(s) 269, 403, 648, 897
CviQI GTAC 5 cut(s) 352, 385, 399, 514, 748
DdeI CTNAG 6 cut(s) 171, 207, 564, 572, 629, 688
DpnI GATC 6 cut(s) 144, 215, 471, 588, 693, 824
DpnII GATC 6 cut(s) 142, 213, 469, 586, 691, 822
Ecl136II GAGCTC 1 cut(s) 788
Eco130I CCWWGG 1 cut(s) 268
Eco147I AGGCCT 1 cut(s) 56
Eco24I GRGCYC 1 cut(s) 790
Eco31I GGTCTC 1 cut(s) 1051
Eco47I GGWCC 3 cut(s) 167, 878, 941
Eco53kI GAGCTC 1 cut(s) 788
Eco57I CTGAAG 2 cut(s) 71, 681
Eco88I CYCGRG 2 cut(s) 278, 653
Eco91I GGTNACC 1 cut(s) 10
EcoICRI GAGCTC 1 cut(s) 788
EcoO65I GGTNACC 1 cut(s) 10
EcoRII CCWGG 3 cut(s) 186, 255, 781
EcoT14I CCWWGG 1 cut(s) 268
EcoT38I GRGCYC 1 cut(s) 790
ErhI CCWWGG 1 cut(s) 268
FaeI CATG 4 cut(s) 272, 406, 651, 900
FatI CATG 4 cut(s) 268, 402, 647, 896
FauNDI CATATG 1 cut(s) 621
FbaI TGATCA 1 cut(s) 586
Fnu4HI GCNGC 6 cut(s) 44, 47, 234, 309, 329, 818
FokI GGATG 3 cut(s) 286, 385, 695
FriOI GRGCYC 1 cut(s) 790
Fsp4HI GCNGC 6 cut(s) 44, 47, 234, 309, 329, 818
FspBI CTAG 3 cut(s) 791, 917, 1055
GlaI GCGC 2 cut(s) 312, 570
GluI GCNGC 6 cut(s) 44, 47, 234, 309, 329, 818
GsuI CTGGAG 3 cut(s) 52, 804, 960
HaeII RGCGCY 1 cut(s) 572
HaeIII GGCC 2 cut(s) 56, 164
HapII CCGG 5 cut(s) 15, 99, 165, 226, 1050
HgaI GACGC 1 cut(s) 26
HhaI GCGC 2 cut(s) 313, 571
Hin1II CATG 4 cut(s) 272, 406, 651, 900
Hin6I GCGC 2 cut(s) 311, 569
HinP1I GCGC 2 cut(s) 311, 569
HincII GTYRAC 1 cut(s) 957
HindII GTYRAC 1 cut(s) 957
HinfI GANTC 2 cut(s) 65, 102
HpaI GTTAAC 1 cut(s) 957
HpaII CCGG 5 cut(s) 15, 99, 165, 226, 1050
HphI GGTGA 7 cut(s) 4, 97, 223, 521, 535, 581, 808
Hpy166II GTNNAC 4 cut(s) 265, 529, 734, 957
Hpy188I TCNGA 4 cut(s) 565, 691, 806, 964
Hpy188III TCNNGA 8 cut(s) 69, 170, 226, 323, 695, 719, 930, 986
Hpy8I GTNNAC 4 cut(s) 265, 529, 734, 957
Hpy99I CGWCG 5 cut(s) 65, 95, 155, 158, 683
HpyAV CCTTC 7 cut(s) 46, 67, 337, 370, 424, 869, 921
HpyCH4III ACNGT 2 cut(s) 679, 997
HpyCH4IV ACGT 1 cut(s) 525
HpyCH4V TGCA 4 cut(s) 43, 442, 495, 817
HpyF10VI GCNNNNNNNGC 1 cut(s) 43
HpyF3I CTNAG 6 cut(s) 171, 207, 564, 572, 629, 688
HpySE526I ACGT 1 cut(s) 525
Hsp92II CATG 4 cut(s) 272, 406, 651, 900
HspAI GCGC 2 cut(s) 311, 569
Kpn2I TCCGGA 1 cut(s) 225
Ksp22I TGATCA 1 cut(s) 586
KspAI GTTAAC 1 cut(s) 957
Kzo9I GATC 6 cut(s) 142, 213, 469, 586, 691, 822
LmnI GCTCC 1 cut(s) 785
Lsp1109I GCAGC 5 cut(s) 55, 58, 245, 315, 829
LweI GCATC 4 cut(s) 85, 96, 172, 264
MaeI CTAG 3 cut(s) 791, 917, 1055
MaeII ACGT 1 cut(s) 525
MaeIII GTNAC 5 cut(s) 10, 446, 455, 541, 664
MalI GATC 6 cut(s) 144, 215, 471, 588, 693, 824
MboI GATC 6 cut(s) 142, 213, 469, 586, 691, 822
MboII GAAGA 3 cut(s) 244, 977, 1070
MflI RGATCY 2 cut(s) 142, 691
MhlI GDGCHC 1 cut(s) 790
MluCI AATT 5 cut(s) 120, 195, 480, 554, 885
MlyI GAGTC 1 cut(s) 59
MroI TCCGGA 1 cut(s) 225
MroXI GAANNNNTTC 1 cut(s) 56
MseI TTAA 2 cut(s) 849, 956
MspA1I CMGCKG 2 cut(s) 49, 820
MspI CCGG 5 cut(s) 15, 99, 165, 226, 1050
MspR9I CCNGG 5 cut(s) 16, 188, 257, 783, 1051
MvaI CCWGG 3 cut(s) 188, 257, 783
MvnI CGCG 1 cut(s) 313
MwoI GCNNNNNNNGC 1 cut(s) 43
NciI CCSGG 2 cut(s) 16, 1051
NcoI CCATGG 1 cut(s) 268
NdeI CATATG 1 cut(s) 621
NdeII GATC 6 cut(s) 142, 213, 469, 586, 691, 822
NlaIII CATG 4 cut(s) 272, 406, 651, 900
NlaIV GGNNCC 1 cut(s) 676
NmeAIII GCCGAG 1 cut(s) 357
NmuCI GTSAC 4 cut(s) 10, 455, 541, 664
NspI RCATGY 1 cut(s) 900
PasI CCCWGGG 1 cut(s) 187
PceI AGGCCT 1 cut(s) 56
PdmI GAANNNNTTC 1 cut(s) 56
PfeI GAWTC 1 cut(s) 102
PflFI GACNNNGTC 1 cut(s) 221
PkrI GCNGC 6 cut(s) 45, 48, 235, 310, 330, 819
PleI GAGTC 1 cut(s) 59
PpsI GAGTC 1 cut(s) 59
Psp124BI GAGCTC 1 cut(s) 790
Psp6I CCWGG 3 cut(s) 186, 255, 781
PspEI GGTNACC 1 cut(s) 10
PspGI CCWGG 3 cut(s) 186, 255, 781
PspN4I GGNNCC 1 cut(s) 676
PspPI GGNCC 4 cut(s) 162, 167, 878, 941
PstI CTGCAG 1 cut(s) 45
PstNI CAGNNNCTG 2 cut(s) 49, 695
PsuI RGATCY 2 cut(s) 142, 691
PsyI GACNNNGTC 1 cut(s) 221
PvuII CAGCTG 2 cut(s) 49, 820
RsaI GTAC 5 cut(s) 353, 386, 400, 515, 749
RsaNI GTAC 5 cut(s) 352, 385, 399, 514, 748
SacI GAGCTC 1 cut(s) 790
SaqAI TTAA 2 cut(s) 849, 956
SatI GCNGC 6 cut(s) 44, 47, 234, 309, 329, 818
Sau3AI GATC 6 cut(s) 142, 213, 469, 586, 691, 822
Sau96I GGNCC 4 cut(s) 162, 167, 878, 941
ScaI AGTACT 2 cut(s) 353, 386
SchI GAGTC 1 cut(s) 59
ScrFI CCNGG 5 cut(s) 16, 188, 257, 783, 1051
SduI GDGCHC 1 cut(s) 790
SfaNI GCATC 4 cut(s) 85, 96, 172, 264
SfcI CTRYAG 2 cut(s) 41, 1070
SinI GGWCC 3 cut(s) 167, 878, 941
SmlI CTYRAG 2 cut(s) 474, 928
SmoI CTYRAG 2 cut(s) 474, 928
Sse9I AATT 5 cut(s) 120, 195, 480, 554, 885
SseBI AGGCCT 1 cut(s) 56
SsiI CCGC 1 cut(s) 308
SspMI CTAG 3 cut(s) 791, 917, 1055
SstI GAGCTC 1 cut(s) 790
StuI AGGCCT 1 cut(s) 56
StyD4I CCNGG 5 cut(s) 14, 186, 255, 781, 1049
StyI CCWWGG 1 cut(s) 268
TaaI ACNGT 2 cut(s) 679, 997
TaiI ACGT 1 cut(s) 528
TaqI TCGA 4 cut(s) 60, 93, 216, 681
TasI AATT 5 cut(s) 120, 195, 480, 554, 885
TatI WGTACW 2 cut(s) 351, 384
TauI GCSGC 1 cut(s) 311
TfiI GAWTC 1 cut(s) 102
Tru1I TTAA 2 cut(s) 849, 956
Tru9I TTAA 2 cut(s) 849, 956
TscAI CASTG 3 cut(s) 449, 764, 1002
TseFI GTSAC 4 cut(s) 10, 455, 541, 664
TseI GCWGC 5 cut(s) 43, 46, 233, 328, 817
Tsp45I GTSAC 4 cut(s) 10, 455, 541, 664
TspDTI ATGAA 4 cut(s) 17, 389, 829, 888
TspGWI ACGGA 3 cut(s) 119, 139, 880
TspRI CASTG 3 cut(s) 449, 764, 1002
Tth111I GACNNNGTC 1 cut(s) 221
VpaK11BI GGWCC 3 cut(s) 167, 878, 941
XapI RAATTY 3 cut(s) 195, 554, 885
XceI RCATGY 1 cut(s) 900
XmnI GAANNNNTTC 1 cut(s) 56
XspI CTAG 3 cut(s) 791, 917, 1055
ZrmI AGTACT 2 cut(s) 353, 386
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.