Rroxscaffold_5G00337370

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
Physical Location & Seq
Forward (+)
5470817 .. 5476939
6123 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00337370.1

Sequence Viewer

Length: 948 bp
ATGCTGGAGGCAACACGCGCGTTCCACGAGCTTCCGAGTGAGATGAAGGTTGATTACTACACTAGGGAACCGATGAGGAAAGTCGGGTTCGTTAGCGACTTTCATCTGTACGAGTCAAGGTCTGCTAATTGGAGGGACAGTTTGTTGTGTGACATGGCTCCCGAGCCTCTTGATCCTTTGGAATTGCCTGCGATTTGCGGTTATGGAAGTGAACCAGCATGCTTAGATGGACAACTTTCATGTTGGGAGTTTTTGCTAGTTTTGACTTTGAATGGGTGGTGGTGCAGCCACTGTGATGGTGGTTTCCGGCGACCTCCGGCCACCCCAAGGACAGTTTCTGTGACTGTTGATTTGAGATGGTGGACGATCGTGGATCGTTGGGCTGCTTTGAAGACGCAGCGGGATTGGAGAGATATAACTGTTGAATACTCTAACAAAATTTATAAATTGGGACTTACTCTGTTTGAGCTGTTATCTGAGGCTCTTGGACTCAAATCAGACCACCTTCTAGGTTTGGATTGTGCAAATGGATATATTATTCTTGGTCATTACTATCCACCATGTCCTGCACCAGAATTGACCATTGGAACGGACAAACACTCGGATGCTAATTTTCTCACTATCCTACTTCAAGACAATATTGGTGGACTCCAAATTTTGCATGAAAATCAATGGATAGATGTTGCTCCCCTAATCTCAAACGACAAATTTGTAAGTGTTAATCACAGGGCAGTGACGAAAACAGTAGGTCCAAGAATTTCAGTAGCATGTTTTCTCAGGCACATGTCACTCGAAAGTTTACCAAGACTGTATGAGCCAATTAAGGAGTTGACGTCAGAAGGAAATCCTGCCAAGTACCGGGCAACCAGTGTGAAAGAGTATGTTGGATACCACTATAATAAAGGTATGATTGCTGGAGTCTCAGGACTAGAATATTTGAAGTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

315

Amino Acids

35.73

Weight (kDa)

5.82

Isoelectric Point (pI)

43.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
2OG-FeII_Oxy PF03171 180 - 260 1.4e-19 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000054)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03400 AT1G03400 AT1G03410 AT1G03410 AT1G04350 AT1G06620 AT1G06620 AT1G06640 AT1G06640 AT1G06640 AT1G06645 AT1G06650 AT1G06650 AT2G25450 AT2G30830 AT2G30840 AT2G30840 AT2G30840 AT3G61400 AT3G61400 AT5G43440 AT5G43440 AT5G43450 AT5G43450 AT5G59530 AT5G59540 AT5G59540
fragaria_vesca FvH4_2g03190 FvH4_2g03220 FvH4_3g07861 FvH4_3g31880 FvH4_3g31880 FvH4_3g31880 FvH4_4g03241 FvH4_4g03250 FvH4_4g03251 FvH4_4g03260 FvH4_4g03300 FvH4_4g03301 FvH4_4g03301 FvH4_4g03301 FvH4_4g03302 FvH4_4g03303 FvH4_4g03303 FvH4_4g03304 FvH4_4g03305 FvH4_4g03323 FvH4_4g03323 FvH4_5g19290 FvH4_5g19290 FvH4_5g19290 FvH4_5g19291 FvH4_5g19291 FvH4_5g19310 FvH4_5g19310 FvH4_5g19310 FvH4_5g19320 FvH4_5g19321 FvH4_5g19321 FvH4_5g19321 FvH4_7g31470
malus_domestica MD00G1220300.v1.1 MD02G1050800.v1.1 MD02G1053200.v1.1 MD02G1053300.v1.1 MD02G1054900.v1.1 MD03G1032300.v1.1 MD03G1245000.v1.1 MD03G1245300.v1.1 MD05G1014200.v1.1 MD13G1210900.v1.1 MD13G1211000.v1.1 MD13G1211100.v1.1 MD13G1211200.v1.1 MD13G1211800.v1.1 MD13G1211900.v1.1 MD13G1212000.v1.1 MD16G1214100.v1.1 MD16G1214300.v1.1 MD16G1214400.v1.1 MD16G1214600.v1.1 MD16G1215000.v1.1 MD16G1215200.v1.1 MD16G1215300.v1.1 MD16G1215500.v1.1 MD16G1271000.v1.1
prunus_persica Prupe.1G035500_v2.0.a1 Prupe.1G035700_v2.0.a1 Prupe.1G035800_v2.0.a1 Prupe.1G035900_v2.0.a1 Prupe.1G036000_v2.0.a1 Prupe.1G036100_v2.0.a1 Prupe.1G036200_v2.0.a1 Prupe.1G036400_v2.0.a1 Prupe.1G036500_v2.0.a1 Prupe.1G036600_v2.0.a1 Prupe.1G036700_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G191000_v2.0.a1 Prupe.1G191100_v2.0.a1
pyrus_communis pycom13g18340 pycom13g18350 pycom13g18380 pycom16g17990 pycom16g18010 pycom16g18020
rosa_chinensis RchiOBHm_Chr2g0124051 RchiOBHm_Chr4g0391811 RchiOBHm_Chr4g0391931 RchiOBHm_Chr4g0391961 RchiOBHm_Chr4g0391971 RchiOBHm_Chr4g0391981 RchiOBHm_Chr4g0391991 RchiOBHm_Chr4g0392031 RchiOBHm_Chr4g0392051 RchiOBHm_Chr4g0392061 RchiOBHm_Chr4g0392071 RchiOBHm_Chr4g0392081 RchiOBHm_Chr4g0392091 RchiOBHm_Chr4g0392111 RchiOBHm_Chr4g0392121 RchiOBHm_Chr4g0392131 RchiOBHm_Chr4g0392141 RchiOBHm_Chr4g0392151 RchiOBHm_Chr4g0392211 RchiOBHm_Chr4g0392251 RchiOBHm_Chr4g0392261 RchiOBHm_Chr4g0392301 RchiOBHm_Chr4g0392311 RchiOBHm_Chr4g0392341 RchiOBHm_Chr4g0409221 RchiOBHm_Chr4g0410991 RchiOBHm_Chr4g0429131 RchiOBHm_Chr4g0437051 RchiOBHm_Chr5g0038681 RchiOBHm_Chr5g0047071 RchiOBHm_Chr5g0058651 RchiOBHm_Chr6g0248121 RchiOBHm_Chr6g0248141 RchiOBHm_Chr6g0248291 RchiOBHm_Chr6g0248341 RchiOBHm_Chr6g0248351
rosa_laevigata RLG00000006473 RLG00000006475 RLG00000006667 RLG00000007095 RLG00000009819 RLG00000009820 RLG00000009821 RLG00000009822 RLG00000009825 RLG00000009826 RLG00000009830 RLG00000009831 RLG00000009832 RLG00000009833 RLG00000009834 RLG00000009835 RLG00000009837 RLG00000009838 RLG00000009839 RLG00000009841 RLG00000009842 RLG00000009844 RLG00000009845 RLG00000009846 RLG00000009847 RLG00000009848 RLG00000009849 RLG00000015160 RLG00000015161 RLG00000017791 RLG00000018779 RLG00000034461 RLG00000035237
rosa_multiflora Rmu_co8253791.1_g000001 Rmu_co8348827.1_g000001 Rmu_co8400489.1_g000001 Rmu_sc0000383.1_g000003 Rmu_sc0000383.1_g000005 Rmu_sc0000383.1_g000026 Rmu_sc0000846.1_g000012 Rmu_sc0001231.1_g000013 Rmu_sc0001231.1_g000026 Rmu_sc0001231.1_g000028 Rmu_sc0001800.1_g000027 Rmu_sc0003436.1_g000022 Rmu_sc0004104.1_g000004 Rmu_sc0004295.1_g000021 Rmu_sc0004295.1_g000031 Rmu_sc0004928.1_g000002 Rmu_sc0004928.1_g000008 Rmu_sc0004928.1_g000011 Rmu_sc0004928.1_g000027 Rmu_sc0004977.1_g000007 Rmu_sc0005018.1_g000002 Rmu_sc0005091.1_g000026 Rmu_sc0005091.1_g000032 Rmu_sc0005091.1_g000033 Rmu_sc0005817.1_g000003 Rmu_sc0005817.1_g000008 Rmu_sc0012482.1_g000002 Rmu_sc0014210.1_g000001 Rmu_sc0016150.1_g000001 Rmu_sc0029701.1_g000002 Rmu_sc0036585.1_g000001 Rmu_sc0037489.1_g000002
rosa_roxburghii Rroxscaffold_1G00021790 Rroxscaffold_1G00021800 Rroxscaffold_1G00034360 Rroxscaffold_2G00120130 Rroxscaffold_5G00337210 Rroxscaffold_5G00337220 Rroxscaffold_5G00337230 Rroxscaffold_5G00337250 Rroxscaffold_5G00337260 Rroxscaffold_5G00337270 Rroxscaffold_5G00337300 Rroxscaffold_5G00337310 Rroxscaffold_5G00337320 Rroxscaffold_5G00337330 Rroxscaffold_5G00337350 Rroxscaffold_5G00337370 Rroxscaffold_5G00337390 Rroxscaffold_5G00337400 Rroxscaffold_5G00337420 Rroxscaffold_5G00337430 Rroxscaffold_5G00337450 Rroxscaffold_5G00337470 Rroxscaffold_5G00337480 Rroxscaffold_5G00337520 Rroxscaffold_5G00378130 Rroxscaffold_6G00397800 Rroxscaffold_7G00213320 Rroxscaffold_7G00213390 Rroxscaffold_7G00213420 Rroxscaffold_7G00213470
rosa_rugosa Rorug02G0070100 Rorug02G0070100 Rorug02G0070100 Rorug02G0128600 Rorug02G0128700 Rorug02G0128800 Rorug02G0128900 Rorug02G0248400 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337100 Rorug03G0337200 Rorug03G0337300 Rorug03G0337600 Rorug03G0337700 Rorug03G0337800 Rorug03G0337900 Rorug03G0337900 Rorug03G0338000 Rorug03G0338100 Rorug03G0338200 Rorug04G0233200.1 Rorug04G0297900 Rorug05G0233700 Rorug05G0316700 Rorug05G0530800 Rorug05G0530900
rosa_samantha Rh2AG307400 Rh2BG316500 Rh2DG331200 Rh4AG039300 Rh4AG039400 Rh4AG039600 Rh4AG039700 Rh4AG039900 Rh4AG040000 Rh4AG040100 Rh4AG040300 Rh4AG040500 Rh4AG040700 Rh4AG041000 Rh4AG041100 Rh4AG041600 Rh4AG041800 Rh4AG041900 Rh4AG352400 Rh4BG033200 Rh4BG034100 Rh4BG034300 Rh4BG034700 Rh4BG034800 Rh4BG035200 Rh4BG035400 Rh4BG036000 Rh4BG036200 Rh4BG036300 Rh4BG036500 Rh4BG036800 Rh4BG361700 Rh4CG042000 Rh4CG042200 Rh4CG042300 Rh4CG042500 Rh4CG042600 Rh4CG042800 Rh4CG043200 Rh4CG043400 Rh4CG043500 Rh4CG043700 Rh4CG043800 Rh4CG044200 Rh4CG044500 Rh4CG044700 Rh4CG177000 Rh4CG310600 Rh4CG376000 Rh4DG036300 Rh4DG036900 Rh4DG037000 Rh4DG037100 Rh4DG037200 Rh4DG037300 Rh4DG037500 Rh4DG037700 Rh4DG037800 Rh4DG037900 Rh4DG038000 Rh4DG038200 Rh4DG038500 Rh4DG038700 Rh4DG038900 Rh4DG159600 Rh5CG347900 Rh5DG409900 Rh6AG045300 Rh6AG045800 Rh6AG046000 Rh6AG046100 Rh6BG040600 Rh6BG040700 Rh6BG042200 Rh6BG042700 Rh6BG042800 Rh6DG035900 Rh6DG036100 Rh6DG036200
rosa_wichuraiana Rw0G010420 Rw2G024780 Rw4G003020 Rw4G003070 Rw4G003080 Rw4G003090 Rw4G003100 Rw4G003130 Rw4G003140 Rw4G003150 Rw4G003180 Rw4G003190 Rw4G003200 Rw4G003210 Rw4G003220 Rw4G003240 Rw4G003270 Rw4G025050 Rw4G030850 Rw6G003930 Rw6G004000 Rw6G004030 Rw6G004040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 444
AatII GACGTC 1 cut(s) 836
AccII CGCG 2 cut(s) 18, 20
AciI CCGC 2 cut(s) 198, 400
AclWI GGATC 2 cut(s) 167, 381
AcoI YGGCCR 1 cut(s) 318
AcsI RAATTY 4 cut(s) 438, 654, 707, 756
AcyI GRCGYC 1 cut(s) 833
AfaI GTAC 2 cut(s) 110, 857
AfiI CCNNNNNNNGG 2 cut(s) 327, 858
AflIII ACRYGT 1 cut(s) 783
AgsI TTSAA 5 cut(s) 271, 391, 425, 632, 940
AjuI GAANNNNNNNTTGG 4 cut(s) 319, 351, 567, 599
AluBI AGCT 2 cut(s) 31, 469
AluI AGCT 2 cut(s) 31, 469
Alw26I GTCTC 1 cut(s) 925
AlwI GGATC 2 cut(s) 167, 381
AlwNI CAGNNNCTG 2 cut(s) 291, 338
Ama87I CYCGRG 1 cut(s) 161
AoxI GGCC 1 cut(s) 318
ApeKI GCWGC 3 cut(s) 285, 383, 397
ApoI RAATTY 4 cut(s) 438, 654, 707, 756
ArsI GACNNNNNNTTYG 2 cut(s) 334, 366
AspLEI GCGC 1 cut(s) 20
AspS9I GGNCC 1 cut(s) 749
AsuC2I CCSGG 1 cut(s) 860
AvaI CYCGRG 1 cut(s) 161
AvaII GGWCC 1 cut(s) 749
BarI GAAGNNNNNNTAC 2 cut(s) 38, 70
BauI CACGAG 1 cut(s) 26
BbsI GAAGAC 1 cut(s) 398
BbvI GCAGC 3 cut(s) 297, 370, 409
BccI CCATC 3 cut(s) 221, 290, 351
BciVI GTATCC 1 cut(s) 881
BcnI CCSGG 1 cut(s) 860
BcoDI GTCTC 1 cut(s) 925
BfaI CTAG 4 cut(s) 63, 257, 509, 929
BfuI GTATCC 1 cut(s) 881
BisI GCNGC 3 cut(s) 286, 384, 398
BlsI GCNGC 3 cut(s) 287, 385, 399
Bme1390I CCNGG 1 cut(s) 860
Bme18I GGWCC 1 cut(s) 749
BmeT110I CYCGRG 1 cut(s) 161
BmgT120I GGNCC 1 cut(s) 749
BmiI GGNNCC 2 cut(s) 69, 159
BmrFI CCNGG 1 cut(s) 860
BmsI GCATC 1 cut(s) 595
BpiI GAAGAC 1 cut(s) 398
BpmI CTGGAG 2 cut(s) 26, 936
BpuMI CCSGG 1 cut(s) 860
BsaHI GRCGYC 1 cut(s) 833
BsaJI CCNNGG 1 cut(s) 326
BsaXI ACNNNNNCTCC 4 cut(s) 124, 154, 818, 848
Bsc4I CCNNNNNNNGG 2 cut(s) 327, 858
Bse1I ACTGG 1 cut(s) 867
BseDI CCNNGG 1 cut(s) 326
BseGI GGATG 1 cut(s) 610
BseLI CCNNNNNNNGG 2 cut(s) 327, 858
BseMII CTCAG 3 cut(s) 468, 790, 936
BseNI ACTGG 1 cut(s) 867
BseXI GCAGC 3 cut(s) 297, 370, 409
BsgI GTGCAG 2 cut(s) 304, 552
Bsh1236I CGCG 2 cut(s) 18, 20
Bsh1285I CGRYCG 1 cut(s) 369
BshFI GGCC 1 cut(s) 320
BsiEI CGRYCG 1 cut(s) 369
BsiHKCI CYCGRG 1 cut(s) 161
BsiSI CCGG 3 cut(s) 307, 317, 859
BslFI GGGAC 2 cut(s) 149, 465
BslI CCNNNNNNNGG 2 cut(s) 327, 858
BsmAI GTCTC 1 cut(s) 925
BsmFI GGGAC 2 cut(s) 149, 465
BsnI GGCC 1 cut(s) 320
BsoBI CYCGRG 1 cut(s) 161
Bsp143I GATC 3 cut(s) 172, 366, 373
BspACI CCGC 2 cut(s) 198, 400
BspANI GGCC 1 cut(s) 320
BspCNI CTCAG 3 cut(s) 469, 789, 935
BspFNI CGCG 2 cut(s) 18, 20
BspLI GGNNCC 2 cut(s) 69, 159
BspPI GGATC 2 cut(s) 167, 381
BsrI ACTGG 1 cut(s) 867
BssECI CCNNGG 1 cut(s) 326
BssMI GATC 3 cut(s) 172, 366, 373
BssNI GRCGYC 1 cut(s) 833
BssSI CACGAG 1 cut(s) 26
BssT1I CCWWGG 1 cut(s) 326
Bst2BI CACGAG 1 cut(s) 26
Bst4CI ACNGT 7 cut(s) 140, 293, 334, 346, 421, 745, 810
BstACI GRCGYC 1 cut(s) 833
BstC8I GCNNGC 2 cut(s) 189, 220
BstDEI CTNAG 4 cut(s) 223, 477, 776, 922
BstF5I GGATG 1 cut(s) 610
BstFNI CGCG 2 cut(s) 18, 20
BstHHI GCGC 1 cut(s) 20
BstKTI GATC 3 cut(s) 175, 369, 376
BstMAI GTCTC 1 cut(s) 925
BstMBI GATC 3 cut(s) 172, 366, 373
BstMCI CGRYCG 1 cut(s) 369
BstMWI GCNNNNNNNGC 1 cut(s) 17
BstNSI RCATGY 3 cut(s) 222, 771, 787
BstSCI CCNGG 1 cut(s) 858
BstUI CGCG 2 cut(s) 18, 20
BstV1I GCAGC 3 cut(s) 297, 370, 409
BstV2I GAAGAC 1 cut(s) 398
BstXI CCANNNNNNTGG 1 cut(s) 296
BsuI GTATCC 1 cut(s) 881
BsuRI GGCC 1 cut(s) 320
BtsCI GGATG 1 cut(s) 610
BtsI GCAGTG 1 cut(s) 738
BtsIMutI CAGTG 3 cut(s) 289, 738, 874
Cac8I GCNNGC 2 cut(s) 189, 220
CaiI CAGNNNCTG 2 cut(s) 291, 338
CfoI GCGC 1 cut(s) 20
Cfr13I GGNCC 1 cut(s) 749
CseI GACGC 1 cut(s) 403
Csp6I GTAC 2 cut(s) 109, 856
CspCI CAANNNNNGTGG 2 cut(s) 625, 660
CviAII CATG 7 cut(s) 154, 219, 240, 561, 662, 768, 784
CviJI RGCY 9 cut(s) 31, 158, 166, 288, 320, 383, 469, 482, 817
CviKI_1 RGCY 9 cut(s) 31, 158, 166, 288, 320, 383, 469, 482, 817
CviQI GTAC 2 cut(s) 109, 856
DdeI CTNAG 4 cut(s) 223, 477, 776, 922
DpnI GATC 3 cut(s) 174, 368, 375
DpnII GATC 3 cut(s) 172, 366, 373
EaeI YGGCCR 1 cut(s) 318
Eco130I CCWWGG 1 cut(s) 326
Eco47I GGWCC 1 cut(s) 749
Eco88I CYCGRG 1 cut(s) 161
EcoT14I CCWWGG 1 cut(s) 326
ErhI CCWWGG 1 cut(s) 326
FaeI CATG 7 cut(s) 157, 222, 243, 564, 665, 771, 787
FaqI GGGAC 2 cut(s) 149, 465
FatI CATG 7 cut(s) 153, 218, 239, 560, 661, 767, 783
FauI CCCGC 1 cut(s) 393
Fnu4HI GCNGC 3 cut(s) 286, 384, 398
FokI GGATG 1 cut(s) 617
Fsp4HI GCNGC 3 cut(s) 286, 384, 398
FspBI CTAG 4 cut(s) 63, 257, 509, 929
GlaI GCGC 1 cut(s) 19
GluI GCNGC 3 cut(s) 286, 384, 398
GsuI CTGGAG 2 cut(s) 26, 936
HaeIII GGCC 1 cut(s) 320
HapII CCGG 3 cut(s) 307, 317, 859
HgaI GACGC 1 cut(s) 403
HhaI GCGC 1 cut(s) 20
Hin1I GRCGYC 1 cut(s) 833
Hin1II CATG 7 cut(s) 157, 222, 243, 564, 665, 771, 787
Hin6I GCGC 1 cut(s) 18
HinP1I GCGC 1 cut(s) 18
HincII GTYRAC 1 cut(s) 831
HindII GTYRAC 1 cut(s) 831
HinfI GANTC 4 cut(s) 113, 489, 648, 918
HpaII CCGG 3 cut(s) 307, 317, 859
Hpy166II GTNNAC 5 cut(s) 212, 363, 647, 800, 831
Hpy188I TCNGA 5 cut(s) 36, 478, 499, 604, 838
Hpy188III TCNNGA 4 cut(s) 161, 170, 632, 924
Hpy8I GTNNAC 5 cut(s) 212, 363, 647, 800, 831
HpyAV CCTTC 3 cut(s) 40, 515, 833
HpyCH4III ACNGT 7 cut(s) 140, 293, 334, 346, 421, 745, 810
HpyCH4IV ACGT 1 cut(s) 833
HpyCH4V TGCA 4 cut(s) 285, 524, 569, 661
HpyF10VI GCNNNNNNNGC 1 cut(s) 17
HpyF3I CTNAG 4 cut(s) 223, 477, 776, 922
HpySE526I ACGT 1 cut(s) 833
Hsp92I GRCGYC 1 cut(s) 833
Hsp92II CATG 7 cut(s) 157, 222, 243, 564, 665, 771, 787
HspAI GCGC 1 cut(s) 18
Kzo9I GATC 3 cut(s) 172, 366, 373
LmnI GCTCC 2 cut(s) 163, 691
Lsp1109I GCAGC 3 cut(s) 297, 370, 409
LweI GCATC 1 cut(s) 595
MaeI CTAG 4 cut(s) 63, 257, 509, 929
MaeII ACGT 1 cut(s) 833
MaeIII GTNAC 4 cut(s) 149, 340, 733, 786
MalI GATC 3 cut(s) 174, 368, 375
MboI GATC 3 cut(s) 172, 366, 373
MboII GAAGA 1 cut(s) 403
MlyI GAGTC 4 cut(s) 122, 483, 642, 927
MmeI TCCRAC 1 cut(s) 865
MnlI CCTC 5 cut(s) 69, 126, 177, 324, 472
MseI TTAA 2 cut(s) 720, 822
MslI CAYNNNNRTG 2 cut(s) 294, 603
MspA1I CMGCKG 1 cut(s) 400
MspI CCGG 3 cut(s) 307, 317, 859
MspR9I CCNGG 1 cut(s) 860
MvnI CGCG 2 cut(s) 18, 20
MwoI GCNNNNNNNGC 1 cut(s) 17
NciI CCSGG 1 cut(s) 860
NdeII GATC 3 cut(s) 172, 366, 373
NlaIII CATG 7 cut(s) 157, 222, 243, 564, 665, 771, 787
NlaIV GGNNCC 2 cut(s) 69, 159
NmuCI GTSAC 4 cut(s) 149, 340, 733, 786
NspI RCATGY 3 cut(s) 222, 771, 787
PaeI GCATGC 1 cut(s) 222
PciI ACATGT 1 cut(s) 783
PkrI GCNGC 3 cut(s) 287, 385, 399
Ple19I CGATCG 1 cut(s) 369
PleI GAGTC 4 cut(s) 121, 483, 642, 926
PpsI GAGTC 4 cut(s) 121, 483, 642, 926
PscI ACATGT 1 cut(s) 783
PsiI TTATAA 1 cut(s) 444
PspN4I GGNNCC 2 cut(s) 69, 159
PspPI GGNCC 1 cut(s) 749
PstNI CAGNNNCTG 2 cut(s) 291, 338
PvuI CGATCG 1 cut(s) 369
RsaI GTAC 2 cut(s) 110, 857
RsaNI GTAC 2 cut(s) 109, 856
RseI CAYNNNNRTG 2 cut(s) 294, 603
SaqAI TTAA 2 cut(s) 720, 822
SatI GCNGC 3 cut(s) 286, 384, 398
Sau3AI GATC 3 cut(s) 172, 366, 373
Sau96I GGNCC 1 cut(s) 749
SchI GAGTC 4 cut(s) 122, 483, 642, 927
ScrFI CCNGG 1 cut(s) 860
SfaNI GCATC 1 cut(s) 595
SinI GGWCC 1 cut(s) 749
SmiMI CAYNNNNRTG 2 cut(s) 294, 603
SphI GCATGC 1 cut(s) 222
SsiI CCGC 2 cut(s) 198, 400
SspI AATATT 2 cut(s) 640, 935
SspMI CTAG 4 cut(s) 63, 257, 509, 929
StyD4I CCNGG 1 cut(s) 858
StyI CCWWGG 1 cut(s) 326
TaaI ACNGT 7 cut(s) 140, 293, 334, 346, 421, 745, 810
TaiI ACGT 1 cut(s) 836
TaqI TCGA 1 cut(s) 792
Tru1I TTAA 2 cut(s) 720, 822
Tru9I TTAA 2 cut(s) 720, 822
TscAI CASTG 3 cut(s) 296, 738, 874
TseFI GTSAC 4 cut(s) 149, 340, 733, 786
TseI GCWGC 3 cut(s) 285, 383, 397
Tsp45I GTSAC 4 cut(s) 149, 340, 733, 786
TspDTI ATGAA 4 cut(s) 59, 92, 228, 678
TspGWI ACGGA 1 cut(s) 605
TspRI CASTG 3 cut(s) 296, 738, 874
VpaK11BI GGWCC 1 cut(s) 749
XapI RAATTY 4 cut(s) 438, 654, 707, 756
XceI RCATGY 3 cut(s) 222, 771, 787
XcmI CCANNNNNNNNNTGG 1 cut(s) 296
XspI CTAG 4 cut(s) 63, 257, 509, 929
ZraI GACGTC 1 cut(s) 834
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.