Rorug03G0337800

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
Physical Location & Seq
Forward (+)
39819603 .. 39824163
4561 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0337800.1

Sequence Viewer

Length: 3708 bp
ATGGGGGGATTAGTGTTGGAAATTGGAAGTCAAATCAGCAAGTTTGTGATGATATCAGTGAAAACATGTTATAAATCAGTTGGCAATCATCCATTTGTTGTGGGCATCCTGCTTTTCCTTATATTTCTGCACAGATCATTTCCTGTTCTGTTTTCTGTTTTGGTGTCAACATCCCCTGTTCTAGTCTGCACTGCTATTCTTCTTGGAACCCTTTTGAGTTTTGGCCAATCCAACATACCCGAAATTGAACGCCAAGACCATATTGCTTCGCTTAGAACCAGGGTTCCAGGCGATGACACTGTTGTTCTTGAGAGGGGTGGCAGCTTTTCCACACAGAAATTCTCTGCGAGCAGGGATGTTGTCGACGCCGTGGCCCTTGAAGAAGCCGGCTCGACAGATTACACAGTCAATGATGAGGTTGGTGCGCCACTTATTAATCAGAATGTGCAGCAGACTCAGAGTGACAAGAGAGCGGTTGAGGATGCGGACAGAGACATAGAGTTGGAAAATCAGGGCTTGCCAAATGATGTGGAAGCAGTTGAGCAGCAGTATACTTTGCTTCAAAAGGTTCGAGATCAGATTCTCCAAGTGCACGATGATAATGCGTCTCCCCGAGGGGGAGAACACTTGGATTCCTTTCTGGGTGGCTATGGTCATGATGACAGTGGTGATGCTTCTGATTCCGGGTCGGATGGGGCCGAGAGCTCGTCGCCAGATGCTTCAATGGCTGACATCCTTCCAATTCTTGATGAGCTACACCCGCTTTTAGACTCAGAAGCTCCACAGCCTGCTCGTATGTTGCATGATGGATCTGATGCAGCTTCAGATACTAGTGTTGAGTCGGACCAGGGTGGACAAGTAGATGAGGATGATGGGGTTGATTACAATGGCGGAGATGAGGAAGAAGTACCGGCACACGGTGGCACGGATGATGAAAGCAAATCTGCAATTAAGTGGACAGATGATGACCAAAAGAATCTCATGGATTTGGGAAATTTGGAGCTTGAAAGGAACCAACGCTTGGAGAGTCTTATTGCAAGGAGAAGGGCAAGAAAAAGCTTCAAATTAACGGCTGAGAAGAATCTAATAGATTTTGATGGTGTTGATCTTCCCCTTAATGTTTCACCAATTTCAACAACAAGGCGCAACCCATTCGATTCTCCATTTGATGACTCCTATGGCAACATGCCCATCCCTGGTTCTGCTCCATCCATTATGTTGGCAAGGAGAAATCCTTTTGATCTTCCTTATGACTCCAATGAAGAAAAACCTGACCTCAAGGGAGACCATTTCGAGCAAGAGTTTATTGCATCGCATGCCAACGATGCATTCTTCCGTAGGCATGAAAGCTTCAGTTTGGGAGCTTCGAGCTTGGGGGGTGCCAAGCACGAGAGGCAAGAATTTAAGTGGAAACCTGTTTTCGTACCAGAAAGATTGGCTTCAGAAGGAACAGGTTACTCCTCATTTCAAAGACAATCAAGTGAAGTTAGTGAATCAAAGTTGAGTTCTGTTCCTGATAGCGACTCGGTGAGTTCTGTAGCAGATTTGGATGATAGGAAGTTCAGTGAGCAAGACTTTACTAAAGAAACGGAAGTTATCTCCAACATTTATCATGCATCTGGTCTTGTTGACCATGGAAGTCATTCCTATGAAGACGTATATTCCCTGGAAATGGAACAGGCTGACAAAAGGGATGTCCTACACAATGGGCTTGATATAGAATTGGGTAAAAGGGAAAATCTGGAACCAAGCTTGTCGGATAATGGAGGCTTACCTACTGTTGTTACTAATGAACTCCATCTGAATCCAGAATTAGTTGAAGAGGAGGACAGCAGCAGTAGGTCAAGCTTGTCATCATTGTCAGAAGCAGATGAAAAAATTTCAGATGTGAGGAAGGGTGAAAAAAGTTTGGACCCAAGTGGTGATCTCAACACGGAGTTTCTAATTTCACCGCAACATTCACTTGAGGAGTCAAATGTTCAATTCATGAGCACGACAGCTGATGAAAATCAATTTAAGGAGCCAGTCTACGACTCAACTCCCCTTGACGCAGAAAACCTCATTTCCTTGAACTCCATTTCTTCTGATATGCAAGCAGAGATATCTGAACTAGTTAGACCTCAAGCATCAGCGGAAATGTATGAGTCTTTTATGTACAAGGATAATGATGTGGATGGTGAGAACATAGAGAAGGCTATTTCAGGTGATGAAGAGATATGTGGTGCCACCTCAAAAGTGCATGAAGCAGATGCAATTGAGGGAGACTTGGGAAACTACAACCAACCCCAGCTAACATCTTCTCTTTCAGAGGTAGAAATCAATCTCCCAAGGAATTTGGAGGTGAATGCAGCTTCTTCAGAATCTAGTTACCACTTTCTTCTTTCCAATGAACAGACATCAGAACAGGAGAAAGACCTATCCTGGTTGGATAAATCCATGGTTGAACCATGTCTTGATGATCATTTGGAAGCTCTTGTTATTGAAGATACTGTCAAGGAAGAGGTGGACGACATAAAGGAGATTGATGCAGAGTTGTTATCAGAATTGGATACAGTTGGAGATTTCAGTGTGAAAGAAGTTGTTGGTGAGCCACTCCATTATGAGTTGATAACAGAGGAAGCTAATGCTGTGAGCACTGAATCTGGGTTGTCGACGGCGGATTCAAACCTGTTAGAGCCCATCCAGGAGCTACCTGTTCTTGAGCACACTCAGGAGGTAGTAGATGTTGATGGGACTTTCAAACAAATTCATGAGGGAGTCAATGTTGAGGAGGTCATGTGTCCTAGCGTGGTTGACAATGAGCTAGAGGTAGTGTCAAAAAGTACAGTGCAGGCCAGTTCACAGTTGCTAACAGTTGAAGCAACATCTTTGGAAGATATTATTACTTCTTCAAATCAAGCTCTAGAAAGTTCTGTTAATGAGTTTCCACAACTATTGGATACAGAGGGGTCAGCAGAATTACATCTGGAATTACCTCCAGAGGGTAATGAGGTATCAGCAGATGTCTTGCCTGATGCAGAGGAGGAGATCGCATCAGGCAATATAGGATCCAGTGTTCAAGAAACTATCACTACGCATATTCCTTTGAAGCAACTATCAGAAGGTAATGTTGCTGAGCTGCCAAATCTATCAAATTCAAAGGATGTATTGGCAGAAGTAGGAACTGAGGCTGTGGTGGAGATTGTATCAAGCAATGTTGTATATGGTGTTGAAGAAACTATCACTGATTCTCCTTTGAAGCAACTATCAGAAGGTAATGTTGCTGAGCTGCCAAATCCATTGAATTCAAAGGATGTATTGGCAGAAGTAGGAACTGAGGCTGTGGTGGAGATTGGATCAAGCAATGTTGTTTATGGTGTTGAAGAAACTATCAGTGATTCTCCTTTGAAGCAAGTCTTGGAAGATGATGTCCGTGAGCTGCCAAAACCAGCAAATTCAAAGGATGGATGTGAAGAAGTAAGAACTATGGTGGGGAATTCTATAGACGAGATTGGATCGAACAATACAGGATCTGGTGTTCAAGAAACTATCCCTACTCATAGTGCGTTGAAGCAAGTCTCGGAAAGTATTGTGGCTGACTCCATAGAGATTGCATCAGGCAATAGAGAAGTTGTGCAAGAACCTATACCTACTCAAGTTTCAGAAAAGAGTGTTGGTGTTGGTGAGCTGCCAAAACCATCTGATTCAAATGATGGATTAGCAGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1235

Amino Acids

134.11

Weight (kDa)

4.18

Isoelectric Point (pI)

48.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000054)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03400 AT1G03400 AT1G03410 AT1G03410 AT1G04350 AT1G06620 AT1G06620 AT1G06640 AT1G06640 AT1G06640 AT1G06645 AT1G06650 AT1G06650 AT2G25450 AT2G30830 AT2G30840 AT2G30840 AT2G30840 AT3G61400 AT3G61400 AT5G43440 AT5G43440 AT5G43450 AT5G43450 AT5G59530 AT5G59540 AT5G59540
fragaria_vesca FvH4_2g03190 FvH4_2g03220 FvH4_3g07861 FvH4_3g31880 FvH4_3g31880 FvH4_3g31880 FvH4_4g03241 FvH4_4g03250 FvH4_4g03251 FvH4_4g03260 FvH4_4g03300 FvH4_4g03301 FvH4_4g03301 FvH4_4g03301 FvH4_4g03302 FvH4_4g03303 FvH4_4g03303 FvH4_4g03304 FvH4_4g03305 FvH4_4g03323 FvH4_4g03323 FvH4_5g19290 FvH4_5g19290 FvH4_5g19290 FvH4_5g19291 FvH4_5g19291 FvH4_5g19310 FvH4_5g19310 FvH4_5g19310 FvH4_5g19320 FvH4_5g19321 FvH4_5g19321 FvH4_5g19321 FvH4_7g31470
malus_domestica MD00G1220300.v1.1 MD02G1050800.v1.1 MD02G1053200.v1.1 MD02G1053300.v1.1 MD02G1054900.v1.1 MD03G1032300.v1.1 MD03G1245000.v1.1 MD03G1245300.v1.1 MD05G1014200.v1.1 MD13G1210900.v1.1 MD13G1211000.v1.1 MD13G1211100.v1.1 MD13G1211200.v1.1 MD13G1211800.v1.1 MD13G1211900.v1.1 MD13G1212000.v1.1 MD16G1214100.v1.1 MD16G1214300.v1.1 MD16G1214400.v1.1 MD16G1214600.v1.1 MD16G1215000.v1.1 MD16G1215200.v1.1 MD16G1215300.v1.1 MD16G1215500.v1.1 MD16G1271000.v1.1
prunus_persica Prupe.1G035500_v2.0.a1 Prupe.1G035700_v2.0.a1 Prupe.1G035800_v2.0.a1 Prupe.1G035900_v2.0.a1 Prupe.1G036000_v2.0.a1 Prupe.1G036100_v2.0.a1 Prupe.1G036200_v2.0.a1 Prupe.1G036400_v2.0.a1 Prupe.1G036500_v2.0.a1 Prupe.1G036600_v2.0.a1 Prupe.1G036700_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G191000_v2.0.a1 Prupe.1G191100_v2.0.a1
pyrus_communis pycom13g18340 pycom13g18350 pycom13g18380 pycom16g17990 pycom16g18010 pycom16g18020
rosa_chinensis RchiOBHm_Chr2g0124051 RchiOBHm_Chr4g0391811 RchiOBHm_Chr4g0391931 RchiOBHm_Chr4g0391961 RchiOBHm_Chr4g0391971 RchiOBHm_Chr4g0391981 RchiOBHm_Chr4g0391991 RchiOBHm_Chr4g0392031 RchiOBHm_Chr4g0392051 RchiOBHm_Chr4g0392061 RchiOBHm_Chr4g0392071 RchiOBHm_Chr4g0392081 RchiOBHm_Chr4g0392091 RchiOBHm_Chr4g0392111 RchiOBHm_Chr4g0392121 RchiOBHm_Chr4g0392131 RchiOBHm_Chr4g0392141 RchiOBHm_Chr4g0392151 RchiOBHm_Chr4g0392211 RchiOBHm_Chr4g0392251 RchiOBHm_Chr4g0392261 RchiOBHm_Chr4g0392301 RchiOBHm_Chr4g0392311 RchiOBHm_Chr4g0392341 RchiOBHm_Chr4g0409221 RchiOBHm_Chr4g0410991 RchiOBHm_Chr4g0429131 RchiOBHm_Chr4g0437051 RchiOBHm_Chr5g0038681 RchiOBHm_Chr5g0047071 RchiOBHm_Chr5g0058651 RchiOBHm_Chr6g0248121 RchiOBHm_Chr6g0248141 RchiOBHm_Chr6g0248291 RchiOBHm_Chr6g0248341 RchiOBHm_Chr6g0248351
rosa_laevigata RLG00000006473 RLG00000006475 RLG00000006667 RLG00000007095 RLG00000009819 RLG00000009820 RLG00000009821 RLG00000009822 RLG00000009825 RLG00000009826 RLG00000009830 RLG00000009831 RLG00000009832 RLG00000009833 RLG00000009834 RLG00000009835 RLG00000009837 RLG00000009838 RLG00000009839 RLG00000009841 RLG00000009842 RLG00000009844 RLG00000009845 RLG00000009846 RLG00000009847 RLG00000009848 RLG00000009849 RLG00000015160 RLG00000015161 RLG00000017791 RLG00000018779 RLG00000034461 RLG00000035237
rosa_multiflora Rmu_co8253791.1_g000001 Rmu_co8348827.1_g000001 Rmu_co8400489.1_g000001 Rmu_sc0000383.1_g000003 Rmu_sc0000383.1_g000005 Rmu_sc0000383.1_g000026 Rmu_sc0000846.1_g000012 Rmu_sc0001231.1_g000013 Rmu_sc0001231.1_g000026 Rmu_sc0001231.1_g000028 Rmu_sc0001800.1_g000027 Rmu_sc0003436.1_g000022 Rmu_sc0004104.1_g000004 Rmu_sc0004295.1_g000021 Rmu_sc0004295.1_g000031 Rmu_sc0004928.1_g000002 Rmu_sc0004928.1_g000008 Rmu_sc0004928.1_g000011 Rmu_sc0004928.1_g000027 Rmu_sc0004977.1_g000007 Rmu_sc0005018.1_g000002 Rmu_sc0005091.1_g000026 Rmu_sc0005091.1_g000032 Rmu_sc0005091.1_g000033 Rmu_sc0005817.1_g000003 Rmu_sc0005817.1_g000008 Rmu_sc0012482.1_g000002 Rmu_sc0014210.1_g000001 Rmu_sc0016150.1_g000001 Rmu_sc0029701.1_g000002 Rmu_sc0036585.1_g000001 Rmu_sc0037489.1_g000002
rosa_roxburghii Rroxscaffold_1G00021790 Rroxscaffold_1G00021800 Rroxscaffold_1G00034360 Rroxscaffold_2G00120130 Rroxscaffold_5G00337210 Rroxscaffold_5G00337220 Rroxscaffold_5G00337230 Rroxscaffold_5G00337250 Rroxscaffold_5G00337260 Rroxscaffold_5G00337270 Rroxscaffold_5G00337300 Rroxscaffold_5G00337310 Rroxscaffold_5G00337320 Rroxscaffold_5G00337330 Rroxscaffold_5G00337350 Rroxscaffold_5G00337370 Rroxscaffold_5G00337390 Rroxscaffold_5G00337400 Rroxscaffold_5G00337420 Rroxscaffold_5G00337430 Rroxscaffold_5G00337450 Rroxscaffold_5G00337470 Rroxscaffold_5G00337480 Rroxscaffold_5G00337520 Rroxscaffold_5G00378130 Rroxscaffold_6G00397800 Rroxscaffold_7G00213320 Rroxscaffold_7G00213390 Rroxscaffold_7G00213420 Rroxscaffold_7G00213470
rosa_rugosa Rorug02G0070100 Rorug02G0070100 Rorug02G0070100 Rorug02G0128600 Rorug02G0128700 Rorug02G0128800 Rorug02G0128900 Rorug02G0248400 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337100 Rorug03G0337200 Rorug03G0337300 Rorug03G0337600 Rorug03G0337700 Rorug03G0337800 Rorug03G0337900 Rorug03G0337900 Rorug03G0338000 Rorug03G0338100 Rorug03G0338200 Rorug04G0233200.1 Rorug04G0297900 Rorug05G0233700 Rorug05G0316700 Rorug05G0530800 Rorug05G0530900
rosa_samantha Rh2AG307400 Rh2BG316500 Rh2DG331200 Rh4AG039300 Rh4AG039400 Rh4AG039600 Rh4AG039700 Rh4AG039900 Rh4AG040000 Rh4AG040100 Rh4AG040300 Rh4AG040500 Rh4AG040700 Rh4AG041000 Rh4AG041100 Rh4AG041600 Rh4AG041800 Rh4AG041900 Rh4AG352400 Rh4BG033200 Rh4BG034100 Rh4BG034300 Rh4BG034700 Rh4BG034800 Rh4BG035200 Rh4BG035400 Rh4BG036000 Rh4BG036200 Rh4BG036300 Rh4BG036500 Rh4BG036800 Rh4BG361700 Rh4CG042000 Rh4CG042200 Rh4CG042300 Rh4CG042500 Rh4CG042600 Rh4CG042800 Rh4CG043200 Rh4CG043400 Rh4CG043500 Rh4CG043700 Rh4CG043800 Rh4CG044200 Rh4CG044500 Rh4CG044700 Rh4CG177000 Rh4CG310600 Rh4CG376000 Rh4DG036300 Rh4DG036900 Rh4DG037000 Rh4DG037100 Rh4DG037200 Rh4DG037300 Rh4DG037500 Rh4DG037700 Rh4DG037800 Rh4DG037900 Rh4DG038000 Rh4DG038200 Rh4DG038500 Rh4DG038700 Rh4DG038900 Rh4DG159600 Rh5CG347900 Rh5DG409900 Rh6AG045300 Rh6AG045800 Rh6AG046000 Rh6AG046100 Rh6BG040600 Rh6BG040700 Rh6BG042200 Rh6BG042700 Rh6BG042800 Rh6DG035900 Rh6DG036100 Rh6DG036200
rosa_wichuraiana Rw0G010420 Rw2G024780 Rw4G003020 Rw4G003070 Rw4G003080 Rw4G003090 Rw4G003100 Rw4G003130 Rw4G003140 Rw4G003150 Rw4G003180 Rw4G003190 Rw4G003200 Rw4G003210 Rw4G003220 Rw4G003240 Rw4G003270 Rw4G025050 Rw4G030850 Rw6G003930 Rw6G004000 Rw6G004030 Rw6G004040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 72
AccB1I GGYRCC 2 cut(s) 1379, 2222
AccB7I CCANNNNNTGG 1 cut(s) 1021
AccBSI CCGCTC 1 cut(s) 473
AccI GTMKAC 4 cut(s) 363, 551, 2028, 2651
AciI CCGC 7 cut(s) 473, 485, 761, 891, 1952, 2132, 2657
AclWI GGATC 6 cut(s) 817, 3042, 3055, 3343, 3502, 3517
AcoI YGGCCR 1 cut(s) 223
AcuI CTGAAG 4 cut(s) 807, 1336, 1425, 2340
AcyI GRCGYC 1 cut(s) 366
AdeI CACNNNGTG 1 cut(s) 920
AfaI GTAC 4 cut(s) 909, 1425, 2156, 2824
AfiI CCNNNNNNNGG 6 cut(s) 617, 917, 1021, 1196, 1672, 2981
AflIII ACRYGT 1 cut(s) 65
AhlI ACTAGT 2 cut(s) 830, 2110
AjnI CCWGG 7 cut(s) 278, 286, 846, 1195, 1665, 2420, 2682
AjuI GAANNNNNNNTTGG 8 cut(s) 1004, 1036, 1313, 1345, 3380, 3412, 3636, 3668
AloI GAACNNNNNNTCC 6 cut(s) 268, 300, 3039, 3071, 3501, 3533
Alw21I GWGCWC 5 cut(s) 594, 707, 1994, 2636, 2706
Alw26I GTCTC 5 cut(s) 486, 612, 1278, 2256, 3562
Alw44I GTGCAC 1 cut(s) 590
AlwI GGATC 6 cut(s) 817, 3042, 3055, 3343, 3502, 3517
AlwNI CAGNNNCTG 1 cut(s) 3512
Ama87I CYCGRG 1 cut(s) 612
AoxI GGCC 4 cut(s) 223, 372, 696, 2832
ApaLI GTGCAC 1 cut(s) 590
ArsI GACNNNNNNTTYG 2 cut(s) 1680, 1712
AseI ATTAAT 1 cut(s) 435
Asp700I GAANNNNTTC 1 cut(s) 1642
AspLEI GCGC 2 cut(s) 427, 1146
AspS9I GGNCC 4 cut(s) 373, 696, 844, 1912
AsuC2I CCSGG 1 cut(s) 685
AvaI CYCGRG 1 cut(s) 612
AvaII GGWCC 2 cut(s) 844, 1912
BaeGI GKGCMC 1 cut(s) 594
BaeI ACNNNNGTAYC 2 cut(s) 819, 852
BalI TGGCCA 1 cut(s) 225
BamHI GGATCC 1 cut(s) 3047
BanI GGYRCC 2 cut(s) 1379, 2222
BanII GRGCYC 2 cut(s) 707, 2679
BauI CACGAG 1 cut(s) 1388
BbsI GAAGAC 1 cut(s) 1659
Bbv12I GWGCWC 5 cut(s) 594, 707, 1994, 2636, 2706
BceAI ACGGC 3 cut(s) 353, 1086, 2670
BcgI CGANNNNNNTGC 4 cut(s) 584, 618, 1135, 1169
BciT130I CCWGG 7 cut(s) 280, 288, 848, 1197, 1667, 2422, 2684
BciVI GTATCC 2 cut(s) 2542, 2932
BclI TGATCA 1 cut(s) 2458
BcnI CCSGG 1 cut(s) 685
BcoDI GTCTC 5 cut(s) 486, 612, 1278, 2256, 3562
BcuI ACTAGT 2 cut(s) 830, 2110
BfaI CTAG 7 cut(s) 182, 831, 2111, 2364, 2784, 2804, 2903
BfmI CTRYAG 2 cut(s) 1536, 3480
BfuI GTATCC 2 cut(s) 2542, 2932
BlpI GCTNAGC 2 cut(s) 3114, 3264
Bme1390I CCNGG 8 cut(s) 280, 288, 685, 848, 1197, 1667, 2422, 2684
Bme18I GGWCC 2 cut(s) 844, 1912
BmeT110I CYCGRG 1 cut(s) 612
BmgT120I GGNCC 4 cut(s) 373, 696, 844, 1912
BmrFI CCNGG 8 cut(s) 280, 288, 685, 848, 1197, 1667, 2422, 2684
BpiI GAAGAC 1 cut(s) 1659
BpmI CTGGAG 1 cut(s) 2961
Bpu1102I GCTNAGC 2 cut(s) 3114, 3264
BpuEI CTTGAG 6 cut(s) 329, 1262, 1985, 2106, 2720, 3618
BpuMI CCSGG 1 cut(s) 685
BsaBI GATNNNNATC 1 cut(s) 2007
BsaHI GRCGYC 1 cut(s) 366
BsaI GGTCTC 1 cut(s) 1278
BsaJI CCNNGG 9 cut(s) 279, 369, 613, 847, 1195, 1633, 1665, 2327, 2436
BsaXI ACNNNNNCTCC 6 cut(s) 2748, 2762, 2778, 2792, 3214, 3244
Bsc4I CCNNNNNNNGG 6 cut(s) 617, 917, 1021, 1196, 1672, 2981
Bse118I RCCGGY 2 cut(s) 386, 910
Bse1I ACTGG 3 cut(s) 2024, 2835, 3051
Bse3DI GCAATG 2 cut(s) 3199, 3349
Bse8I GATNNNNATC 1 cut(s) 2007
BseBI CCWGG 7 cut(s) 280, 288, 848, 1197, 1667, 2422, 2684
BseDI CCNNGG 9 cut(s) 279, 369, 613, 847, 1195, 1633, 1665, 2327, 2436
BseJI GATNNNNATC 1 cut(s) 2007
BseLI CCNNNNNNNGG 6 cut(s) 617, 917, 1021, 1196, 1672, 2981
BseMI GCAATG 2 cut(s) 3199, 3349
BseMII CTCAG 8 cut(s) 470, 786, 1065, 2723, 3105, 3156, 3255, 3306
BseNI ACTGG 3 cut(s) 2024, 2835, 3051
BseRI GAGGAG 6 cut(s) 1450, 1838, 1982, 2783, 3035, 3038
BseSI GKGCMC 1 cut(s) 594
BseYI CCCAGC 1 cut(s) 2286
BsgI GTGCAG 4 cut(s) 113, 172, 467, 2849
BshFI GGCC 4 cut(s) 225, 374, 698, 2834
BshNI GGYRCC 2 cut(s) 1379, 2222
BsiHKAI GWGCWC 5 cut(s) 594, 707, 1994, 2636, 2706
BsiHKCI CYCGRG 1 cut(s) 612
BsiSI CCGG 3 cut(s) 387, 684, 911
BslFI GGGAC 1 cut(s) 2746
BslI CCNNNNNNNGG 6 cut(s) 617, 917, 1021, 1196, 1672, 2981
BsmAI GTCTC 5 cut(s) 486, 612, 1278, 2256, 3562
BsmBI CGTCTC 1 cut(s) 612
BsmFI GGGAC 1 cut(s) 2746
BsmI GAATGC 2 cut(s) 1328, 2350
BsnI GGCC 4 cut(s) 225, 374, 698, 2834
Bso31I GGTCTC 1 cut(s) 1278
BsoBI CYCGRG 1 cut(s) 612
Bsp1286I GDGCHC 6 cut(s) 594, 707, 1994, 2636, 2679, 2706
Bsp1407I TGTACA 1 cut(s) 2154
Bsp1720I GCTNAGC 2 cut(s) 3114, 3264
Bsp19I CCATGG 2 cut(s) 1633, 2436
BspACI CCGC 7 cut(s) 473, 485, 761, 891, 1952, 2132, 2657
BspANI GGCC 4 cut(s) 225, 374, 698, 2834
BspCNI CTCAG 8 cut(s) 469, 785, 1066, 2722, 3106, 3157, 3256, 3307
BspHI TCATGA 3 cut(s) 655, 1986, 2749
BspPI GGATC 6 cut(s) 817, 3042, 3055, 3343, 3502, 3517
BspT107I GGYRCC 2 cut(s) 1379, 2222
BspTNI GGTCTC 1 cut(s) 1278
BsrBI CCGCTC 1 cut(s) 473
BsrDI GCAATG 2 cut(s) 3199, 3349
BsrFI RCCGGY 2 cut(s) 386, 910
BsrGI TGTACA 1 cut(s) 2154
BsrI ACTGG 3 cut(s) 2024, 2835, 3051
BssAI RCCGGY 2 cut(s) 386, 910
BssECI CCNNGG 9 cut(s) 279, 369, 613, 847, 1195, 1633, 1665, 2327, 2436
BssNAI GTATAC 1 cut(s) 552
BssNI GRCGYC 1 cut(s) 366
BssSI CACGAG 1 cut(s) 1388
BssT1I CCWWGG 3 cut(s) 1633, 2327, 2436
Bst1107I GTATAC 1 cut(s) 552
Bst2BI CACGAG 1 cut(s) 1388
Bst2UI CCWGG 7 cut(s) 280, 288, 848, 1197, 1667, 2422, 2684
Bst6I CTCTTC 3 cut(s) 1815, 2205, 2493
BstACI GRCGYC 1 cut(s) 366
BstAPI GCANNNNNTGC 1 cut(s) 1316
BstAUI TGTACA 1 cut(s) 2154
BstC8I GCNNGC 7 cut(s) 349, 388, 518, 789, 1317, 2094, 2832
BstDEI CTNAG 9 cut(s) 272, 456, 772, 1074, 2709, 3114, 3165, 3264, 3315
BstDSI CCRYGG 3 cut(s) 369, 1633, 2436
BstHHI GCGC 2 cut(s) 427, 1146
BstMAI GTCTC 5 cut(s) 486, 612, 1278, 2256, 3562
BstMWI GCNNNNNNNGC 5 cut(s) 725, 760, 1316, 1325, 1393
BstNI CCWGG 7 cut(s) 280, 288, 848, 1197, 1667, 2422, 2684
BstNSI RCATGY 3 cut(s) 69, 1189, 1319
BstSCI CCNGG 8 cut(s) 278, 286, 683, 846, 1195, 1665, 2420, 2682
BstSFI CTRYAG 2 cut(s) 1536, 3480
BstSLI GKGCMC 1 cut(s) 594
BstV2I GAAGAC 1 cut(s) 1659
BstX2I RGATCY 3 cut(s) 809, 3047, 3509
BstXI CCANNNNNNTGG 1 cut(s) 1219
BstYI RGATCY 3 cut(s) 809, 3047, 3509
BstZ17I GTATAC 1 cut(s) 552
BsuI GTATCC 2 cut(s) 2542, 2932
BsuRI GGCC 4 cut(s) 225, 374, 698, 2834
BtgI CCRYGG 3 cut(s) 369, 1633, 2436
BtgZI GCGATG 2 cut(s) 306, 1296
BtsI GCAGTG 1 cut(s) 189
Cac8I GCNNGC 7 cut(s) 349, 388, 518, 789, 1317, 2094, 2832
CaiI CAGNNNCTG 1 cut(s) 3512
CciI TCATGA 3 cut(s) 655, 1986, 2749
CfoI GCGC 2 cut(s) 427, 1146
Cfr10I RCCGGY 2 cut(s) 386, 910
Cfr13I GGNCC 4 cut(s) 373, 696, 844, 1912
CseI GACGC 3 cut(s) 374, 594, 2057
Csp6I GTAC 4 cut(s) 908, 1424, 2155, 2823
CspCI CAANNNNNGTGG 4 cut(s) 510, 545, 2916, 2951
CviQI GTAC 4 cut(s) 908, 1424, 2155, 2823
DdeI CTNAG 9 cut(s) 272, 456, 772, 1074, 2709, 3114, 3165, 3264, 3315
DraIII CACNNNGTG 1 cut(s) 920
EaeI YGGCCR 1 cut(s) 223
Eam1104I CTCTTC 3 cut(s) 1815, 2205, 2493
EarI CTCTTC 3 cut(s) 1815, 2205, 2493
EciI GGCGGA 2 cut(s) 906, 2672
Ecl136II GAGCTC 1 cut(s) 705
Eco130I CCWWGG 3 cut(s) 1633, 2327, 2436
Eco24I GRGCYC 2 cut(s) 707, 2679
Eco31I GGTCTC 1 cut(s) 1278
Eco32I GATATC 2 cut(s) 54, 2103
Eco47I GGWCC 2 cut(s) 844, 1912
Eco53kI GAGCTC 1 cut(s) 705
Eco57I CTGAAG 4 cut(s) 807, 1336, 1425, 2340
Eco88I CYCGRG 1 cut(s) 612
EcoICRI GAGCTC 1 cut(s) 705
EcoRI GAATTC 2 cut(s) 3283, 3475
EcoRII CCWGG 7 cut(s) 278, 286, 846, 1195, 1665, 2420, 2682
EcoRV GATATC 2 cut(s) 54, 2103
EcoT14I CCWWGG 3 cut(s) 1633, 2327, 2436
EcoT22I ATGCAT 2 cut(s) 1330, 1618
EcoT38I GRGCYC 2 cut(s) 707, 2679
ErhI CCWWGG 3 cut(s) 1633, 2327, 2436
Esp3I CGTCTC 1 cut(s) 612
FalI AAGNNNNNCTT 4 cut(s) 1423, 1455, 3380, 3412
FaqI GGGAC 1 cut(s) 2746
FauI CCCGC 1 cut(s) 768
FbaI TGATCA 1 cut(s) 2458
FblI GTMKAC 4 cut(s) 363, 551, 2028, 2651
FriOI GRGCYC 2 cut(s) 707, 2679
FspBI CTAG 7 cut(s) 182, 831, 2111, 2364, 2784, 2804, 2903
GlaI GCGC 2 cut(s) 426, 1145
GsaI CCCAGC 1 cut(s) 2290
GsuI CTGGAG 1 cut(s) 2961
HaeIII GGCC 4 cut(s) 225, 374, 698, 2834
HapII CCGG 3 cut(s) 387, 684, 911
HgaI GACGC 3 cut(s) 374, 594, 2057
HhaI GCGC 2 cut(s) 427, 1146
Hin1I GRCGYC 1 cut(s) 366
Hin6I GCGC 2 cut(s) 425, 1144
HinP1I GCGC 2 cut(s) 425, 1144
HincII GTYRAC 5 cut(s) 168, 364, 1630, 2652, 2794
HindII GTYRAC 5 cut(s) 168, 364, 1630, 2652, 2794
HindIII AAGCTT 4 cut(s) 1057, 1348, 1750, 1846
HpaII CCGG 3 cut(s) 387, 684, 911
Hpy99I CGWCG 3 cut(s) 368, 712, 2656
HpyAV CCTTC 7 cut(s) 746, 1038, 1439, 1888, 2185, 3095, 3245
HpyCH4IV ACGT 1 cut(s) 1656
HpyF10VI GCNNNNNNNGC 5 cut(s) 725, 760, 1316, 1325, 1393
HpyF3I CTNAG 9 cut(s) 272, 456, 772, 1074, 2709, 3114, 3165, 3264, 3315
HpySE526I ACGT 1 cut(s) 1656
Hsp92I GRCGYC 1 cut(s) 366
HspAI GCGC 2 cut(s) 425, 1144
KroI GCCGGC 1 cut(s) 386
KroNI GCCGGC 1 cut(s) 388
Ksp22I TGATCA 1 cut(s) 2458
LmnI GCTCC 6 cut(s) 784, 1000, 1210, 1361, 2020, 2686
MaeI CTAG 7 cut(s) 182, 831, 2111, 2364, 2784, 2804, 2903
MaeII ACGT 1 cut(s) 1656
MaeIII GTNAC 4 cut(s) 461, 1454, 1783, 2366
MbiI CCGCTC 1 cut(s) 473
MfeI CAATTG 1 cut(s) 2253
MflI RGATCY 3 cut(s) 809, 3047, 3509
MhlI GDGCHC 6 cut(s) 594, 707, 1994, 2636, 2679, 2706
MlsI TGGCCA 1 cut(s) 225
MluNI TGGCCA 1 cut(s) 225
MmeI TCCRAC 8 cut(s) 255, 483, 669, 822, 1626, 1737, 2406, 2536
Mox20I TGGCCA 1 cut(s) 225
Mph1103I ATGCAT 2 cut(s) 1330, 1618
MroNI GCCGGC 1 cut(s) 386
MroXI GAANNNNTTC 1 cut(s) 1642
MscI TGGCCA 1 cut(s) 225
MseI TTAA 7 cut(s) 435, 951, 1067, 1116, 1404, 2016, 2916
MslI CAYNNNNRTG 1 cut(s) 1647
Msp20I TGGCCA 1 cut(s) 225
MspA1I CMGCKG 2 cut(s) 2000, 2132
MspI CCGG 3 cut(s) 387, 684, 911
MspR9I CCNGG 8 cut(s) 280, 288, 685, 848, 1197, 1667, 2422, 2684
MunI CAATTG 1 cut(s) 2253
Mva1269I GAATGC 2 cut(s) 1328, 2350
MvaI CCWGG 7 cut(s) 280, 288, 848, 1197, 1667, 2422, 2684
MwoI GCNNNNNNNGC 5 cut(s) 725, 760, 1316, 1325, 1393
NaeI GCCGGC 1 cut(s) 388
NciI CCSGG 1 cut(s) 685
NcoI CCATGG 2 cut(s) 1633, 2436
NgoMIV GCCGGC 1 cut(s) 386
NmeAIII GCCGAG 1 cut(s) 724
NmuCI GTSAC 1 cut(s) 461
NsiI ATGCAT 2 cut(s) 1330, 1618
NspI RCATGY 3 cut(s) 69, 1189, 1319
PaeI GCATGC 1 cut(s) 1319
PagI TCATGA 3 cut(s) 655, 1986, 2749
PciI ACATGT 1 cut(s) 65
PctI GAATGC 2 cut(s) 1328, 2350
PdiI GCCGGC 1 cut(s) 388
PdmI GAANNNNTTC 1 cut(s) 1642
PflMI CCANNNNNTGG 1 cut(s) 1021
PfoI TCCNGGA 1 cut(s) 2682
PscI ACATGT 1 cut(s) 65
PshBI ATTAAT 1 cut(s) 435
PsiI TTATAA 1 cut(s) 72
Psp124BI GAGCTC 1 cut(s) 707
Psp6I CCWGG 7 cut(s) 278, 286, 846, 1195, 1665, 2420, 2682
PspFI CCCAGC 1 cut(s) 2286
PspGI CCWGG 7 cut(s) 278, 286, 846, 1195, 1665, 2420, 2682
PspPI GGNCC 4 cut(s) 373, 696, 844, 1912
PstNI CAGNNNCTG 1 cut(s) 3512
PsuI RGATCY 3 cut(s) 809, 3047, 3509
PvuII CAGCTG 1 cut(s) 2000
RsaI GTAC 4 cut(s) 909, 1425, 2156, 2824
RsaNI GTAC 4 cut(s) 908, 1424, 2155, 2823
RseI CAYNNNNRTG 1 cut(s) 1647
SacI GAGCTC 1 cut(s) 707
SalI GTCGAC 2 cut(s) 362, 2650
SaqAI TTAA 7 cut(s) 435, 951, 1067, 1116, 1404, 2016, 2916
Sau96I GGNCC 4 cut(s) 373, 696, 844, 1912
ScrFI CCNGG 8 cut(s) 280, 288, 685, 848, 1197, 1667, 2422, 2684
SduI GDGCHC 6 cut(s) 594, 707, 1994, 2636, 2679, 2706
SfcI CTRYAG 2 cut(s) 1536, 3480
SinI GGWCC 2 cut(s) 844, 1912
SmiMI CAYNNNNRTG 1 cut(s) 1647
SmlI CTYRAG 6 cut(s) 308, 1277, 1964, 2121, 2699, 3633
SmoI CTYRAG 6 cut(s) 308, 1277, 1964, 2121, 2699, 3633
SpeI ACTAGT 2 cut(s) 830, 2110
SphI GCATGC 1 cut(s) 1319
SsiI CCGC 7 cut(s) 473, 485, 761, 891, 1952, 2132, 2657
SspMI CTAG 7 cut(s) 182, 831, 2111, 2364, 2784, 2804, 2903
SstI GAGCTC 1 cut(s) 707
StyD4I CCNGG 8 cut(s) 278, 286, 683, 846, 1195, 1665, 2420, 2682
StyI CCWWGG 3 cut(s) 1633, 2327, 2436
TaiI ACGT 1 cut(s) 1659
TaqI TCGA 8 cut(s) 363, 392, 571, 1155, 1293, 1367, 2651, 3497
TatI WGTACW 2 cut(s) 2154, 2822
Tru1I TTAA 7 cut(s) 435, 951, 1067, 1116, 1404, 2016, 2916
Tru9I TTAA 7 cut(s) 435, 951, 1067, 1116, 1404, 2016, 2916
TseFI GTSAC 1 cut(s) 461
Tsp45I GTSAC 1 cut(s) 461
TspGWI ACGGA 5 cut(s) 941, 1325, 1604, 1949, 3401
Van91I CCANNNNNTGG 1 cut(s) 1021
VneI GTGCAC 1 cut(s) 590
VpaK11BI GGWCC 2 cut(s) 844, 1912
VspI ATTAAT 1 cut(s) 435
XbaI TCTAGA 1 cut(s) 2902
XceI RCATGY 3 cut(s) 69, 1189, 1319
XmiI GTMKAC 4 cut(s) 363, 551, 2028, 2651
XmnI GAANNNNTTC 1 cut(s) 1642
XspI CTAG 7 cut(s) 182, 831, 2111, 2364, 2784, 2804, 2903
Zsp2I ATGCAT 2 cut(s) 1330, 1618
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.