Rroxscaffold_5G00378130

Belongs to the iron ascorbate-dependent oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0000054
Physical Location & Seq
Forward (+)
58654459 .. 58656193
1735 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00378130.1

Sequence Viewer

Length: 981 bp
ATGGAGGCCACCGGTGACCGTACAAGTGAATTAAAAGCGTTTGATGATACAAAAGCCGGTGTGAAAGGACTGGTGGATGCAGGCATCACAAGAATCCCTCGCATTTTCCACTCTAGATCACAACCAAGTGTTGATCAGAGGGAGGGAAGTGACGGTGGCGCCAAGTTGAGTATTCCGATCATTGATCTTCAAGGCACAATCCATGCAGACTCAGCTTTACGAGCTGAGGTAGTGAATCATGGAATTCCTGTAAATGTTTTGGATGGGGTGATTAGAGGAATGCGAGAGTTCCATGAACAGGATAGTGAGCTGAAGAAAGAGTTGTATACAAGGACTCCCGGCAAGAAAGTGTATTATCTGTCTAATCATGATTTGTACCAAGCTTCATCAGCTGACTGGAGAGACACACTTGCCTGTTCTATGGTTCCTAATCCACCCAAACCAGAAGAATTACCATCAGTATGCAGTTGCCGAGATATAGTGATCGAGTACTCAAAGCATGTGAAAGATTTGGGATTAACCTTGTTTGAGATACTGTCTGAGGCTCTTGGGCTTAATCCCAACCATCTTAAAGACATGAACTGCGCCGAGGGCATTCTTCTTGTTGGTAACTACTATCCAGCATGCCCTGAGCCAGAATTAACTTTCGGCATTGGCAAGCATACTGATTTTACTTTCATCACCATTCTTTTGCAAGACCGAGTAGGCGGTCTTGAAGCTTTACAATCTGACATGGATGTCATAGCAAATGACAAGTTTATTAGCGCGGCTCACAGAGTTAGAGCAACTAATGTAGGGTCAAGAACTTCTGTGGTAAGTTTTTTTGGATTTGACGGGAACTCGAAAGTTTTTGCACCAATCAAAGAGTTGTTATCAGAAGAGAATCCCCAAATCTACCAAGAAGTTGATATTAAAGATTATGTAAGGTACTTCTACTCAGAAGGTAAAGAGAATTCTCCATTACGACATTTCAAGTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2OG-FeII_Oxy DIOX_N

Protein Analysis

326

Amino Acids

36.25

Weight (kDa)

5.42

Isoelectric Point (pI)

35.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
2OG-FeII_Oxy PF03171 201 - 275 2e-14 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000054)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03400 AT1G03400 AT1G03410 AT1G03410 AT1G04350 AT1G06620 AT1G06620 AT1G06640 AT1G06640 AT1G06640 AT1G06645 AT1G06650 AT1G06650 AT2G25450 AT2G30830 AT2G30840 AT2G30840 AT2G30840 AT3G61400 AT3G61400 AT5G43440 AT5G43440 AT5G43450 AT5G43450 AT5G59530 AT5G59540 AT5G59540
fragaria_vesca FvH4_2g03190 FvH4_2g03220 FvH4_3g07861 FvH4_3g31880 FvH4_3g31880 FvH4_3g31880 FvH4_4g03241 FvH4_4g03250 FvH4_4g03251 FvH4_4g03260 FvH4_4g03300 FvH4_4g03301 FvH4_4g03301 FvH4_4g03301 FvH4_4g03302 FvH4_4g03303 FvH4_4g03303 FvH4_4g03304 FvH4_4g03305 FvH4_4g03323 FvH4_4g03323 FvH4_5g19290 FvH4_5g19290 FvH4_5g19290 FvH4_5g19291 FvH4_5g19291 FvH4_5g19310 FvH4_5g19310 FvH4_5g19310 FvH4_5g19320 FvH4_5g19321 FvH4_5g19321 FvH4_5g19321 FvH4_7g31470
malus_domestica MD00G1220300.v1.1 MD02G1050800.v1.1 MD02G1053200.v1.1 MD02G1053300.v1.1 MD02G1054900.v1.1 MD03G1032300.v1.1 MD03G1245000.v1.1 MD03G1245300.v1.1 MD05G1014200.v1.1 MD13G1210900.v1.1 MD13G1211000.v1.1 MD13G1211100.v1.1 MD13G1211200.v1.1 MD13G1211800.v1.1 MD13G1211900.v1.1 MD13G1212000.v1.1 MD16G1214100.v1.1 MD16G1214300.v1.1 MD16G1214400.v1.1 MD16G1214600.v1.1 MD16G1215000.v1.1 MD16G1215200.v1.1 MD16G1215300.v1.1 MD16G1215500.v1.1 MD16G1271000.v1.1
prunus_persica Prupe.1G035500_v2.0.a1 Prupe.1G035700_v2.0.a1 Prupe.1G035800_v2.0.a1 Prupe.1G035900_v2.0.a1 Prupe.1G036000_v2.0.a1 Prupe.1G036100_v2.0.a1 Prupe.1G036200_v2.0.a1 Prupe.1G036400_v2.0.a1 Prupe.1G036500_v2.0.a1 Prupe.1G036600_v2.0.a1 Prupe.1G036700_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G191000_v2.0.a1 Prupe.1G191100_v2.0.a1
pyrus_communis pycom13g18340 pycom13g18350 pycom13g18380 pycom16g17990 pycom16g18010 pycom16g18020
rosa_chinensis RchiOBHm_Chr2g0124051 RchiOBHm_Chr4g0391811 RchiOBHm_Chr4g0391931 RchiOBHm_Chr4g0391961 RchiOBHm_Chr4g0391971 RchiOBHm_Chr4g0391981 RchiOBHm_Chr4g0391991 RchiOBHm_Chr4g0392031 RchiOBHm_Chr4g0392051 RchiOBHm_Chr4g0392061 RchiOBHm_Chr4g0392071 RchiOBHm_Chr4g0392081 RchiOBHm_Chr4g0392091 RchiOBHm_Chr4g0392111 RchiOBHm_Chr4g0392121 RchiOBHm_Chr4g0392131 RchiOBHm_Chr4g0392141 RchiOBHm_Chr4g0392151 RchiOBHm_Chr4g0392211 RchiOBHm_Chr4g0392251 RchiOBHm_Chr4g0392261 RchiOBHm_Chr4g0392301 RchiOBHm_Chr4g0392311 RchiOBHm_Chr4g0392341 RchiOBHm_Chr4g0409221 RchiOBHm_Chr4g0410991 RchiOBHm_Chr4g0429131 RchiOBHm_Chr4g0437051 RchiOBHm_Chr5g0038681 RchiOBHm_Chr5g0047071 RchiOBHm_Chr5g0058651 RchiOBHm_Chr6g0248121 RchiOBHm_Chr6g0248141 RchiOBHm_Chr6g0248291 RchiOBHm_Chr6g0248341 RchiOBHm_Chr6g0248351
rosa_laevigata RLG00000006473 RLG00000006475 RLG00000006667 RLG00000007095 RLG00000009819 RLG00000009820 RLG00000009821 RLG00000009822 RLG00000009825 RLG00000009826 RLG00000009830 RLG00000009831 RLG00000009832 RLG00000009833 RLG00000009834 RLG00000009835 RLG00000009837 RLG00000009838 RLG00000009839 RLG00000009841 RLG00000009842 RLG00000009844 RLG00000009845 RLG00000009846 RLG00000009847 RLG00000009848 RLG00000009849 RLG00000015160 RLG00000015161 RLG00000017791 RLG00000018779 RLG00000034461 RLG00000035237
rosa_multiflora Rmu_co8253791.1_g000001 Rmu_co8348827.1_g000001 Rmu_co8400489.1_g000001 Rmu_sc0000383.1_g000003 Rmu_sc0000383.1_g000005 Rmu_sc0000383.1_g000026 Rmu_sc0000846.1_g000012 Rmu_sc0001231.1_g000013 Rmu_sc0001231.1_g000026 Rmu_sc0001231.1_g000028 Rmu_sc0001800.1_g000027 Rmu_sc0003436.1_g000022 Rmu_sc0004104.1_g000004 Rmu_sc0004295.1_g000021 Rmu_sc0004295.1_g000031 Rmu_sc0004928.1_g000002 Rmu_sc0004928.1_g000008 Rmu_sc0004928.1_g000011 Rmu_sc0004928.1_g000027 Rmu_sc0004977.1_g000007 Rmu_sc0005018.1_g000002 Rmu_sc0005091.1_g000026 Rmu_sc0005091.1_g000032 Rmu_sc0005091.1_g000033 Rmu_sc0005817.1_g000003 Rmu_sc0005817.1_g000008 Rmu_sc0012482.1_g000002 Rmu_sc0014210.1_g000001 Rmu_sc0016150.1_g000001 Rmu_sc0029701.1_g000002 Rmu_sc0036585.1_g000001 Rmu_sc0037489.1_g000002
rosa_roxburghii Rroxscaffold_1G00021790 Rroxscaffold_1G00021800 Rroxscaffold_1G00034360 Rroxscaffold_2G00120130 Rroxscaffold_5G00337210 Rroxscaffold_5G00337220 Rroxscaffold_5G00337230 Rroxscaffold_5G00337250 Rroxscaffold_5G00337260 Rroxscaffold_5G00337270 Rroxscaffold_5G00337300 Rroxscaffold_5G00337310 Rroxscaffold_5G00337320 Rroxscaffold_5G00337330 Rroxscaffold_5G00337350 Rroxscaffold_5G00337370 Rroxscaffold_5G00337390 Rroxscaffold_5G00337400 Rroxscaffold_5G00337420 Rroxscaffold_5G00337430 Rroxscaffold_5G00337450 Rroxscaffold_5G00337470 Rroxscaffold_5G00337480 Rroxscaffold_5G00337520 Rroxscaffold_5G00378130 Rroxscaffold_6G00397800 Rroxscaffold_7G00213320 Rroxscaffold_7G00213390 Rroxscaffold_7G00213420 Rroxscaffold_7G00213470
rosa_rugosa Rorug02G0070100 Rorug02G0070100 Rorug02G0070100 Rorug02G0128600 Rorug02G0128700 Rorug02G0128800 Rorug02G0128900 Rorug02G0248400 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337100 Rorug03G0337200 Rorug03G0337300 Rorug03G0337600 Rorug03G0337700 Rorug03G0337800 Rorug03G0337900 Rorug03G0337900 Rorug03G0338000 Rorug03G0338100 Rorug03G0338200 Rorug04G0233200.1 Rorug04G0297900 Rorug05G0233700 Rorug05G0316700 Rorug05G0530800 Rorug05G0530900
rosa_samantha Rh2AG307400 Rh2BG316500 Rh2DG331200 Rh4AG039300 Rh4AG039400 Rh4AG039600 Rh4AG039700 Rh4AG039900 Rh4AG040000 Rh4AG040100 Rh4AG040300 Rh4AG040500 Rh4AG040700 Rh4AG041000 Rh4AG041100 Rh4AG041600 Rh4AG041800 Rh4AG041900 Rh4AG352400 Rh4BG033200 Rh4BG034100 Rh4BG034300 Rh4BG034700 Rh4BG034800 Rh4BG035200 Rh4BG035400 Rh4BG036000 Rh4BG036200 Rh4BG036300 Rh4BG036500 Rh4BG036800 Rh4BG361700 Rh4CG042000 Rh4CG042200 Rh4CG042300 Rh4CG042500 Rh4CG042600 Rh4CG042800 Rh4CG043200 Rh4CG043400 Rh4CG043500 Rh4CG043700 Rh4CG043800 Rh4CG044200 Rh4CG044500 Rh4CG044700 Rh4CG177000 Rh4CG310600 Rh4CG376000 Rh4DG036300 Rh4DG036900 Rh4DG037000 Rh4DG037100 Rh4DG037200 Rh4DG037300 Rh4DG037500 Rh4DG037700 Rh4DG037800 Rh4DG037900 Rh4DG038000 Rh4DG038200 Rh4DG038500 Rh4DG038700 Rh4DG038900 Rh4DG159600 Rh5CG347900 Rh5DG409900 Rh6AG045300 Rh6AG045800 Rh6AG046000 Rh6AG046100 Rh6BG040600 Rh6BG040700 Rh6BG042200 Rh6BG042700 Rh6BG042800 Rh6DG035900 Rh6DG036100 Rh6DG036200
rosa_wichuraiana Rw0G010420 Rw2G024780 Rw4G003020 Rw4G003070 Rw4G003080 Rw4G003090 Rw4G003100 Rw4G003130 Rw4G003140 Rw4G003150 Rw4G003180 Rw4G003190 Rw4G003200 Rw4G003210 Rw4G003220 Rw4G003240 Rw4G003270 Rw4G025050 Rw4G030850 Rw6G003930 Rw6G004000 Rw6G004030 Rw6G004040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 737
AccB1I GGYRCC 1 cut(s) 158
AccI GTMKAC 1 cut(s) 326
AccII CGCG 1 cut(s) 767
AciI CCGC 2 cut(s) 708, 767
AcsI RAATTY 2 cut(s) 243, 952
AcuI CTGAAG 1 cut(s) 332
AcyI GRCGYC 1 cut(s) 159
AfaI GTAC 4 cut(s) 22, 377, 491, 929
AfiI CCNNNNNNNGG 1 cut(s) 298
AgeI ACCGGT 1 cut(s) 11
AgsI TTSAA 3 cut(s) 191, 716, 973
AluBI AGCT 6 cut(s) 215, 224, 310, 383, 392, 719
AluI AGCT 6 cut(s) 215, 224, 310, 383, 392, 719
Alw26I GTCTC 1 cut(s) 396
AoxI GGCC 1 cut(s) 6
ApoI RAATTY 2 cut(s) 243, 952
AsiGI ACCGGT 1 cut(s) 11
AspLEI GCGC 3 cut(s) 161, 587, 767
AsuC2I CCSGG 1 cut(s) 339
AsuHPI GGTGA 3 cut(s) 26, 280, 673
BanI GGYRCC 1 cut(s) 158
BbvCI CCTCAGC 1 cut(s) 225
BccI CCATC 3 cut(s) 257, 463, 573
BclI TGATCA 1 cut(s) 133
BcnI CCSGG 1 cut(s) 339
BcoDI GTCTC 1 cut(s) 396
BfaI CTAG 1 cut(s) 114
BfoI RGCGCY 1 cut(s) 162
BisI GCNGC 1 cut(s) 768
BlsI GCNGC 1 cut(s) 769
BmcAI AGTACT 1 cut(s) 491
Bme1390I CCNGG 1 cut(s) 339
BmiI GGNNCC 2 cut(s) 160, 426
BmrFI CCNGG 1 cut(s) 339
BmsI GCATC 2 cut(s) 67, 93
BpmI CTGGAG 1 cut(s) 418
Bpu10I CCTNAGC 2 cut(s) 225, 630
BpuMI CCSGG 1 cut(s) 339
BsaHI GRCGYC 1 cut(s) 159
BsaJI CCNNGG 1 cut(s) 588
BsaWI WCCGGW 1 cut(s) 11
BsaXI ACNNNNNCTCC 2 cut(s) 319, 349
Bsc4I CCNNNNNNNGG 1 cut(s) 298
Bse118I RCCGGY 2 cut(s) 11, 56
Bse1I ACTGG 2 cut(s) 75, 401
BseDI CCNNGG 1 cut(s) 588
BseGI GGATG 3 cut(s) 82, 268, 742
BseLI CCNNNNNNNGG 1 cut(s) 298
BseMII CTCAG 5 cut(s) 216, 225, 531, 621, 951
BseNI ACTGG 2 cut(s) 75, 401
Bsh1236I CGCG 1 cut(s) 767
BshFI GGCC 1 cut(s) 8
BshNI GGYRCC 1 cut(s) 158
BshTI ACCGGT 1 cut(s) 11
BsiSI CCGG 3 cut(s) 12, 57, 339
BslI CCNNNNNNNGG 1 cut(s) 298
BsmAI GTCTC 1 cut(s) 396
BsmI GAATGC 2 cut(s) 285, 594
BsnI GGCC 1 cut(s) 8
Bsp143I GATC 5 cut(s) 116, 133, 177, 184, 483
BspACI CCGC 2 cut(s) 708, 767
BspANI GGCC 1 cut(s) 8
BspCNI CTCAG 5 cut(s) 217, 224, 532, 622, 950
BspFNI CGCG 1 cut(s) 767
BspHI TCATGA 1 cut(s) 367
BspLI GGNNCC 2 cut(s) 160, 426
BspT107I GGYRCC 1 cut(s) 158
BsrFI RCCGGY 2 cut(s) 11, 56
BsrI ACTGG 2 cut(s) 75, 401
BssAI RCCGGY 2 cut(s) 11, 56
BssECI CCNNGG 1 cut(s) 588
BssMI GATC 5 cut(s) 116, 133, 177, 184, 483
BssNAI GTATAC 1 cut(s) 327
BssNI GRCGYC 1 cut(s) 159
Bst1107I GTATAC 1 cut(s) 327
Bst4CI ACNGT 3 cut(s) 20, 155, 537
Bst6I CTCTTC 1 cut(s) 873
BstACI GRCGYC 1 cut(s) 159
BstC8I GCNNGC 3 cut(s) 82, 625, 659
BstDEI CTNAG 5 cut(s) 211, 225, 540, 630, 937
BstEII GGTNACC 1 cut(s) 14
BstF5I GGATG 3 cut(s) 82, 268, 742
BstFNI CGCG 1 cut(s) 767
BstH2I RGCGCY 1 cut(s) 162
BstHHI GCGC 3 cut(s) 161, 587, 767
BstKTI GATC 5 cut(s) 119, 136, 180, 187, 486
BstMAI GTCTC 1 cut(s) 396
BstMBI GATC 5 cut(s) 116, 133, 177, 184, 483
BstMWI GCNNNNNNNGC 4 cut(s) 212, 221, 389, 591
BstNSI RCATGY 2 cut(s) 503, 627
BstPI GGTNACC 1 cut(s) 14
BstSCI CCNGG 1 cut(s) 337
BstUI CGCG 1 cut(s) 767
BstZ17I GTATAC 1 cut(s) 327
BsuRI GGCC 1 cut(s) 8
BtsCI GGATG 3 cut(s) 82, 268, 742
Cac8I GCNNGC 3 cut(s) 82, 625, 659
CciI TCATGA 1 cut(s) 367
CfoI GCGC 3 cut(s) 161, 587, 767
Cfr10I RCCGGY 2 cut(s) 11, 56
Csp6I GTAC 4 cut(s) 21, 376, 490, 928
CspAI ACCGGT 1 cut(s) 11
CviAII CATG 8 cut(s) 203, 239, 293, 368, 500, 577, 624, 733
CviQI GTAC 4 cut(s) 21, 376, 490, 928
DdeI CTNAG 5 cut(s) 211, 225, 540, 630, 937
DinI GGCGCC 1 cut(s) 160
DpnI GATC 5 cut(s) 118, 135, 179, 186, 485
DpnII GATC 5 cut(s) 116, 133, 177, 184, 483
DrdI GACNNNNNNGTC 1 cut(s) 737
DseDI GACNNNNNNGTC 1 cut(s) 737
Eam1104I CTCTTC 1 cut(s) 873
EarI CTCTTC 1 cut(s) 873
Eco57I CTGAAG 1 cut(s) 332
Eco91I GGTNACC 1 cut(s) 14
EcoO65I GGTNACC 1 cut(s) 14
EcoRI GAATTC 2 cut(s) 243, 952
EgeI GGCGCC 1 cut(s) 160
EheI GGCGCC 1 cut(s) 160
FaeI CATG 8 cut(s) 206, 242, 296, 371, 503, 580, 627, 736
FatI CATG 8 cut(s) 202, 238, 292, 367, 499, 576, 623, 732
FbaI TGATCA 1 cut(s) 133
FblI GTMKAC 1 cut(s) 326
Fnu4HI GCNGC 1 cut(s) 768
FokI GGATG 3 cut(s) 89, 275, 749
Fsp4HI GCNGC 1 cut(s) 768
FspBI CTAG 1 cut(s) 114
GlaI GCGC 3 cut(s) 160, 586, 766
GluI GCNGC 1 cut(s) 768
GsuI CTGGAG 1 cut(s) 418
HaeII RGCGCY 1 cut(s) 162
HaeIII GGCC 1 cut(s) 8
HapII CCGG 3 cut(s) 12, 57, 339
HhaI GCGC 3 cut(s) 161, 587, 767
Hin1I GRCGYC 1 cut(s) 159
Hin1II CATG 8 cut(s) 206, 242, 296, 371, 503, 580, 627, 736
Hin6I GCGC 3 cut(s) 159, 585, 765
HinP1I GCGC 3 cut(s) 159, 585, 765
HindIII AAGCTT 2 cut(s) 381, 717
HinfI GANTC 5 cut(s) 93, 209, 235, 334, 883
HpaII CCGG 3 cut(s) 12, 57, 339
HphI GGTGA 3 cut(s) 26, 280, 673
Hpy166II GTNNAC 1 cut(s) 327
Hpy188I TCNGA 6 cut(s) 138, 177, 541, 730, 877, 940
Hpy188III TCNNGA 4 cut(s) 114, 368, 713, 801
Hpy8I GTNNAC 1 cut(s) 327
HpyAV CCTTC 1 cut(s) 935
HpyCH4III ACNGT 3 cut(s) 20, 155, 537
HpyCH4V TGCA 5 cut(s) 80, 206, 465, 694, 854
HpyF10VI GCNNNNNNNGC 4 cut(s) 212, 221, 389, 591
HpyF3I CTNAG 5 cut(s) 211, 225, 540, 630, 937
Hsp92I GRCGYC 1 cut(s) 159
Hsp92II CATG 8 cut(s) 206, 242, 296, 371, 503, 580, 627, 736
HspAI GCGC 3 cut(s) 159, 585, 765
KasI GGCGCC 1 cut(s) 158
Ksp22I TGATCA 1 cut(s) 133
Kzo9I GATC 5 cut(s) 116, 133, 177, 184, 483
LweI GCATC 2 cut(s) 67, 93
MaeI CTAG 1 cut(s) 114
MaeIII GTNAC 3 cut(s) 14, 149, 608
MalI GATC 5 cut(s) 118, 135, 179, 186, 485
MboI GATC 5 cut(s) 116, 133, 177, 184, 483
MboII GAAGA 5 cut(s) 179, 325, 458, 590, 890
MluCI AATT 5 cut(s) 29, 243, 449, 638, 952
Mly113I GGCGCC 1 cut(s) 159
MlyI GAGTC 2 cut(s) 203, 328
MnlI CCTC 7 cut(s) 108, 132, 136, 220, 269, 535, 583
MseI TTAA 6 cut(s) 32, 518, 555, 570, 641, 912
MslI CAYNNNNRTG 1 cut(s) 460
MspA1I CMGCKG 1 cut(s) 392
MspI CCGG 3 cut(s) 12, 57, 339
MspR9I CCNGG 1 cut(s) 339
Mva1269I GAATGC 2 cut(s) 285, 594
MvnI CGCG 1 cut(s) 767
MwoI GCNNNNNNNGC 4 cut(s) 212, 221, 389, 591
NarI GGCGCC 1 cut(s) 159
NciI CCSGG 1 cut(s) 339
NdeII GATC 5 cut(s) 116, 133, 177, 184, 483
NlaIII CATG 8 cut(s) 206, 242, 296, 371, 503, 580, 627, 736
NlaIV GGNNCC 2 cut(s) 160, 426
NmeAIII GCCGAG 2 cut(s) 497, 613
NmuCI GTSAC 2 cut(s) 14, 149
NspI RCATGY 2 cut(s) 503, 627
PaeI GCATGC 1 cut(s) 627
PagI TCATGA 1 cut(s) 367
PctI GAATGC 2 cut(s) 285, 594
PfeI GAWTC 3 cut(s) 93, 235, 883
PinAI ACCGGT 1 cut(s) 11
PkrI GCNGC 1 cut(s) 769
PleI GAGTC 2 cut(s) 203, 328
PluTI GGCGCC 1 cut(s) 162
PpsI GAGTC 2 cut(s) 203, 328
PspEI GGTNACC 1 cut(s) 14
PspN4I GGNNCC 2 cut(s) 160, 426
PvuII CAGCTG 1 cut(s) 392
RsaI GTAC 4 cut(s) 22, 377, 491, 929
RsaNI GTAC 4 cut(s) 21, 376, 490, 928
RseI CAYNNNNRTG 1 cut(s) 460
SaqAI TTAA 6 cut(s) 32, 518, 555, 570, 641, 912
SatI GCNGC 1 cut(s) 768
Sau3AI GATC 5 cut(s) 116, 133, 177, 184, 483
ScaI AGTACT 1 cut(s) 491
SchI GAGTC 2 cut(s) 203, 328
ScrFI CCNGG 1 cut(s) 339
SfaNI GCATC 2 cut(s) 67, 93
SfoI GGCGCC 1 cut(s) 160
SgrAI CRCCGGYG 1 cut(s) 11
SmiMI CAYNNNNRTG 1 cut(s) 460
SphI GCATGC 1 cut(s) 627
Sse9I AATT 5 cut(s) 29, 243, 449, 638, 952
SsiI CCGC 2 cut(s) 708, 767
SspDI GGCGCC 1 cut(s) 158
SspMI CTAG 1 cut(s) 114
StyD4I CCNGG 1 cut(s) 337
TaaI ACNGT 3 cut(s) 20, 155, 537
TaqI TCGA 2 cut(s) 486, 842
TaqII GACCGA 1 cut(s) 714
TasI AATT 5 cut(s) 29, 243, 449, 638, 952
TatI WGTACW 1 cut(s) 489
TauI GCSGC 1 cut(s) 770
TfiI GAWTC 3 cut(s) 93, 235, 883
Tru1I TTAA 6 cut(s) 32, 518, 555, 570, 641, 912
Tru9I TTAA 6 cut(s) 32, 518, 555, 570, 641, 912
TseFI GTSAC 2 cut(s) 14, 149
Tsp45I GTSAC 2 cut(s) 14, 149
TspDTI ATGAA 4 cut(s) 309, 375, 593, 667
XapI RAATTY 2 cut(s) 243, 952
XbaI TCTAGA 1 cut(s) 113
XceI RCATGY 2 cut(s) 503, 627
XmiI GTMKAC 1 cut(s) 326
XspI CTAG 1 cut(s) 114
ZrmI AGTACT 1 cut(s) 491
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.