FvH4_4g03304

Belongs to the iron ascorbate-dependent oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000054
Physical Location & Seq
Forward (+)
2931890 .. 2934214
2325 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g03304.t1

Sequence Viewer

Length: 1143 bp
ATGTCCAAAAGACTTCGAGTCTTGTACCCTTTACCAGATTTCGTAAAAATGGTCACCGAGACCTCAAGCGGTCAAGAGCGTCTGCAACAACTTAAGGCCTTCGACGAATCAAAAGCTGGTGTCAAAGGGATCGTCGATACCGGAATCACCAAAGTCCCACCAATTTTCGTCCGTCCAAATAAAGATCCCTCTGTCATCGGCGACCATAAGGTTTCAGGCGGTTTCAGTATCCCAGTGGTGGATCTCTCTGAAAATAACAGCAGGAGAGCTGAGGTGATCGACCAAGTTCGGAGGGCCGCAGAGACTTATGGGTTCTTCCAGGTTGTGAACCATGGAGTGCCCCAGAGAGTGATGGAGGAAATCATGGAGGCGACTCGTGCGTTTCACGAGCTGCCTAAGGAGGTGAAGGCCGAGTACTATGGTAGGGATATGGTGAGGAAGGTCAAGTACTACTCTAGTGCTAACATGTATGAGTTGATGTATGCTAATTGGAGAGACACTATGCAGTTAAACACGACTGTTGAGGACTTTGATCCTCAAGAAATACCTCCCATTCTCAGAGATATAACTATGGAGTACTCAGAGCATGCTCAGAAATTAGGCGTCACTTTGTTTGAATTGCTATCTGAAGCGCTTGGGCTCAAACCGGATCATCTCATAAACTTGGATTGTGCAAAGGGGCATATGATTCTTAATCACTACTATCCCCCATGCCCCGAGCCTGATCTGACTATGGGCACTAATCAACACTCGGATTTTGATTTTTTGACCATCCTCCTACAAGACCAAATTGGTGGACTCCAAGTTCTGCATCAAAACAAGTGGATTAATGTTACTCCTGTGCTTGGAGCGCTGATCATCAACATTGGAGATCTCTTGCAGCTAATCTCAAATGGCAAGTTCAATAGTGTCAAGCACAGAGTGGTTTCCAAAAAGGAAGGTCCAAGAATTTCTGTGGCATATTTTTTTGTGCATCTTTCTCGTGAAAATACTCCGAGAGTGTATGAGCCAATCAAGGAGTTGACATCAGAAGGAAATCCCCCAATTTACAGGGGAACGACTGCGAAAGATTATGTTACCGGCGTCTATAAGAAAGGGAACATAAATGGGATAGGCTCTGGACTAGAGTATTTAAAGCTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2OG-FeII_Oxy DIOX_N

Protein Analysis

381

Amino Acids

43.01

Weight (kDa)

6.61

Isoelectric Point (pI)

34.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 77 - 179 9.1e-23 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 228 - 323 3.1e-33 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000054)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03400 AT1G03400 AT1G03410 AT1G03410 AT1G04350 AT1G06620 AT1G06620 AT1G06640 AT1G06640 AT1G06640 AT1G06645 AT1G06650 AT1G06650 AT2G25450 AT2G30830 AT2G30840 AT2G30840 AT2G30840 AT3G61400 AT3G61400 AT5G43440 AT5G43440 AT5G43450 AT5G43450 AT5G59530 AT5G59540 AT5G59540
fragaria_vesca FvH4_2g03190 FvH4_2g03220 FvH4_3g07861 FvH4_3g31880 FvH4_3g31880 FvH4_3g31880 FvH4_4g03241 FvH4_4g03250 FvH4_4g03251 FvH4_4g03260 FvH4_4g03300 FvH4_4g03301 FvH4_4g03301 FvH4_4g03301 FvH4_4g03302 FvH4_4g03303 FvH4_4g03303 FvH4_4g03304 FvH4_4g03305 FvH4_4g03323 FvH4_4g03323 FvH4_5g19290 FvH4_5g19290 FvH4_5g19290 FvH4_5g19291 FvH4_5g19291 FvH4_5g19310 FvH4_5g19310 FvH4_5g19310 FvH4_5g19320 FvH4_5g19321 FvH4_5g19321 FvH4_5g19321 FvH4_7g31470
malus_domestica MD00G1220300.v1.1 MD02G1050800.v1.1 MD02G1053200.v1.1 MD02G1053300.v1.1 MD02G1054900.v1.1 MD03G1032300.v1.1 MD03G1245000.v1.1 MD03G1245300.v1.1 MD05G1014200.v1.1 MD13G1210900.v1.1 MD13G1211000.v1.1 MD13G1211100.v1.1 MD13G1211200.v1.1 MD13G1211800.v1.1 MD13G1211900.v1.1 MD13G1212000.v1.1 MD16G1214100.v1.1 MD16G1214300.v1.1 MD16G1214400.v1.1 MD16G1214600.v1.1 MD16G1215000.v1.1 MD16G1215200.v1.1 MD16G1215300.v1.1 MD16G1215500.v1.1 MD16G1271000.v1.1
prunus_persica Prupe.1G035500_v2.0.a1 Prupe.1G035700_v2.0.a1 Prupe.1G035800_v2.0.a1 Prupe.1G035900_v2.0.a1 Prupe.1G036000_v2.0.a1 Prupe.1G036100_v2.0.a1 Prupe.1G036200_v2.0.a1 Prupe.1G036400_v2.0.a1 Prupe.1G036500_v2.0.a1 Prupe.1G036600_v2.0.a1 Prupe.1G036700_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G191000_v2.0.a1 Prupe.1G191100_v2.0.a1
pyrus_communis pycom13g18340 pycom13g18350 pycom13g18380 pycom16g17990 pycom16g18010 pycom16g18020
rosa_chinensis RchiOBHm_Chr2g0124051 RchiOBHm_Chr4g0391811 RchiOBHm_Chr4g0391931 RchiOBHm_Chr4g0391961 RchiOBHm_Chr4g0391971 RchiOBHm_Chr4g0391981 RchiOBHm_Chr4g0391991 RchiOBHm_Chr4g0392031 RchiOBHm_Chr4g0392051 RchiOBHm_Chr4g0392061 RchiOBHm_Chr4g0392071 RchiOBHm_Chr4g0392081 RchiOBHm_Chr4g0392091 RchiOBHm_Chr4g0392111 RchiOBHm_Chr4g0392121 RchiOBHm_Chr4g0392131 RchiOBHm_Chr4g0392141 RchiOBHm_Chr4g0392151 RchiOBHm_Chr4g0392211 RchiOBHm_Chr4g0392251 RchiOBHm_Chr4g0392261 RchiOBHm_Chr4g0392301 RchiOBHm_Chr4g0392311 RchiOBHm_Chr4g0392341 RchiOBHm_Chr4g0409221 RchiOBHm_Chr4g0410991 RchiOBHm_Chr4g0429131 RchiOBHm_Chr4g0437051 RchiOBHm_Chr5g0038681 RchiOBHm_Chr5g0047071 RchiOBHm_Chr5g0058651 RchiOBHm_Chr6g0248121 RchiOBHm_Chr6g0248141 RchiOBHm_Chr6g0248291 RchiOBHm_Chr6g0248341 RchiOBHm_Chr6g0248351
rosa_laevigata RLG00000006473 RLG00000006475 RLG00000006667 RLG00000007095 RLG00000009819 RLG00000009820 RLG00000009821 RLG00000009822 RLG00000009825 RLG00000009826 RLG00000009830 RLG00000009831 RLG00000009832 RLG00000009833 RLG00000009834 RLG00000009835 RLG00000009837 RLG00000009838 RLG00000009839 RLG00000009841 RLG00000009842 RLG00000009844 RLG00000009845 RLG00000009846 RLG00000009847 RLG00000009848 RLG00000009849 RLG00000015160 RLG00000015161 RLG00000017791 RLG00000018779 RLG00000034461 RLG00000035237
rosa_multiflora Rmu_co8253791.1_g000001 Rmu_co8348827.1_g000001 Rmu_co8400489.1_g000001 Rmu_sc0000383.1_g000003 Rmu_sc0000383.1_g000005 Rmu_sc0000383.1_g000026 Rmu_sc0000846.1_g000012 Rmu_sc0001231.1_g000013 Rmu_sc0001231.1_g000026 Rmu_sc0001231.1_g000028 Rmu_sc0001800.1_g000027 Rmu_sc0003436.1_g000022 Rmu_sc0004104.1_g000004 Rmu_sc0004295.1_g000021 Rmu_sc0004295.1_g000031 Rmu_sc0004928.1_g000002 Rmu_sc0004928.1_g000008 Rmu_sc0004928.1_g000011 Rmu_sc0004928.1_g000027 Rmu_sc0004977.1_g000007 Rmu_sc0005018.1_g000002 Rmu_sc0005091.1_g000026 Rmu_sc0005091.1_g000032 Rmu_sc0005091.1_g000033 Rmu_sc0005817.1_g000003 Rmu_sc0005817.1_g000008 Rmu_sc0012482.1_g000002 Rmu_sc0014210.1_g000001 Rmu_sc0016150.1_g000001 Rmu_sc0029701.1_g000002 Rmu_sc0036585.1_g000001 Rmu_sc0037489.1_g000002
rosa_roxburghii Rroxscaffold_1G00021790 Rroxscaffold_1G00021800 Rroxscaffold_1G00034360 Rroxscaffold_2G00120130 Rroxscaffold_5G00337210 Rroxscaffold_5G00337220 Rroxscaffold_5G00337230 Rroxscaffold_5G00337250 Rroxscaffold_5G00337260 Rroxscaffold_5G00337270 Rroxscaffold_5G00337300 Rroxscaffold_5G00337310 Rroxscaffold_5G00337320 Rroxscaffold_5G00337330 Rroxscaffold_5G00337350 Rroxscaffold_5G00337370 Rroxscaffold_5G00337390 Rroxscaffold_5G00337400 Rroxscaffold_5G00337420 Rroxscaffold_5G00337430 Rroxscaffold_5G00337450 Rroxscaffold_5G00337470 Rroxscaffold_5G00337480 Rroxscaffold_5G00337520 Rroxscaffold_5G00378130 Rroxscaffold_6G00397800 Rroxscaffold_7G00213320 Rroxscaffold_7G00213390 Rroxscaffold_7G00213420 Rroxscaffold_7G00213470
rosa_rugosa Rorug02G0070100 Rorug02G0070100 Rorug02G0070100 Rorug02G0128600 Rorug02G0128700 Rorug02G0128800 Rorug02G0128900 Rorug02G0248400 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337100 Rorug03G0337200 Rorug03G0337300 Rorug03G0337600 Rorug03G0337700 Rorug03G0337800 Rorug03G0337900 Rorug03G0337900 Rorug03G0338000 Rorug03G0338100 Rorug03G0338200 Rorug04G0233200.1 Rorug04G0297900 Rorug05G0233700 Rorug05G0316700 Rorug05G0530800 Rorug05G0530900
rosa_samantha Rh2AG307400 Rh2BG316500 Rh2DG331200 Rh4AG039300 Rh4AG039400 Rh4AG039600 Rh4AG039700 Rh4AG039900 Rh4AG040000 Rh4AG040100 Rh4AG040300 Rh4AG040500 Rh4AG040700 Rh4AG041000 Rh4AG041100 Rh4AG041600 Rh4AG041800 Rh4AG041900 Rh4AG352400 Rh4BG033200 Rh4BG034100 Rh4BG034300 Rh4BG034700 Rh4BG034800 Rh4BG035200 Rh4BG035400 Rh4BG036000 Rh4BG036200 Rh4BG036300 Rh4BG036500 Rh4BG036800 Rh4BG361700 Rh4CG042000 Rh4CG042200 Rh4CG042300 Rh4CG042500 Rh4CG042600 Rh4CG042800 Rh4CG043200 Rh4CG043400 Rh4CG043500 Rh4CG043700 Rh4CG043800 Rh4CG044200 Rh4CG044500 Rh4CG044700 Rh4CG177000 Rh4CG310600 Rh4CG376000 Rh4DG036300 Rh4DG036900 Rh4DG037000 Rh4DG037100 Rh4DG037200 Rh4DG037300 Rh4DG037500 Rh4DG037700 Rh4DG037800 Rh4DG037900 Rh4DG038000 Rh4DG038200 Rh4DG038500 Rh4DG038700 Rh4DG038900 Rh4DG159600 Rh5CG347900 Rh5DG409900 Rh6AG045300 Rh6AG045800 Rh6AG046000 Rh6AG046100 Rh6BG040600 Rh6BG040700 Rh6BG042200 Rh6BG042700 Rh6BG042800 Rh6DG035900 Rh6DG036100 Rh6DG036200
rosa_wichuraiana Rw0G010420 Rw2G024780 Rw4G003020 Rw4G003070 Rw4G003080 Rw4G003090 Rw4G003100 Rw4G003130 Rw4G003140 Rw4G003150 Rw4G003180 Rw4G003190 Rw4G003200 Rw4G003210 Rw4G003220 Rw4G003240 Rw4G003270 Rw4G025050 Rw4G030850 Rw6G003930 Rw6G004000 Rw6G004030 Rw6G004040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 69, 219, 297
AclWI GGATC 5 cut(s) 137, 179, 249, 527, 657
AcsI RAATTY 1 cut(s) 948
AcuI CTGAAG 1 cut(s) 648
AcyI GRCGYC 2 cut(s) 603, 1083
AdeI CACNNNGTG 1 cut(s) 922
AfaI GTAC 4 cut(s) 26, 416, 449, 578
AfeI AGCGCT 2 cut(s) 633, 852
AfiI CCNNNNNNNGG 2 cut(s) 238, 845
AflII CTTAAG 1 cut(s) 92
AflIII ACRYGT 1 cut(s) 465
AgsI TTSAA 2 cut(s) 617, 904
AhdI GACNNNNNGTC 1 cut(s) 17
AjnI CCWGG 1 cut(s) 318
AloI GAACNNNNNNTCC 2 cut(s) 789, 821
AluBI AGCT 5 cut(s) 116, 269, 391, 883, 1138
AluI AGCT 5 cut(s) 116, 269, 391, 883, 1138
Alw26I GTCTC 3 cut(s) 53, 296, 489
AlwI GGATC 5 cut(s) 137, 179, 249, 527, 657
Ama87I CYCGRG 1 cut(s) 716
Aor51HI AGCGCT 2 cut(s) 633, 852
AoxI GGCC 3 cut(s) 96, 294, 408
ApeKI GCWGC 2 cut(s) 391, 880
ApoI RAATTY 1 cut(s) 948
ArsI GACNNNNNNTTYG 2 cut(s) 117, 149
AseI ATTAAT 1 cut(s) 828
AspLEI GCGC 2 cut(s) 634, 853
AspS9I GGNCC 2 cut(s) 294, 941
AsuHPI GGTGA 5 cut(s) 46, 139, 286, 415, 445
AvaI CYCGRG 1 cut(s) 716
AvaII GGWCC 1 cut(s) 941
AxyI CCTNAGG 1 cut(s) 396
BaeGI GKGCMC 2 cut(s) 342, 740
BanII GRGCYC 1 cut(s) 642
BarI GAAGNNNNNNTAC 4 cut(s) 398, 430, 431, 463
BauI CACGAG 3 cut(s) 375, 386, 981
BbvCI CCTCAGC 1 cut(s) 270
BbvI GCAGC 2 cut(s) 378, 892
BccI CCATC 2 cut(s) 346, 779
BcgI CGANNNNNNTGC 2 cut(s) 962, 996
BciT130I CCWGG 1 cut(s) 320
BciVI GTATCC 1 cut(s) 239
BclI TGATCA 1 cut(s) 855
BcoDI GTCTC 3 cut(s) 53, 296, 489
BfaI CTAG 2 cut(s) 456, 1124
BfoI RGCGCY 2 cut(s) 635, 854
BfrI CTTAAG 1 cut(s) 92
BfuI GTATCC 1 cut(s) 239
BglII AGATCT 1 cut(s) 871
BisI GCNGC 3 cut(s) 297, 392, 881
BlsI GCNGC 3 cut(s) 298, 393, 882
BmcAI AGTACT 3 cut(s) 416, 449, 578
Bme1390I CCNGG 1 cut(s) 320
Bme18I GGWCC 1 cut(s) 941
BmeRI GACNNNNNGTC 1 cut(s) 17
BmeT110I CYCGRG 1 cut(s) 716
BmgT120I GGNCC 2 cut(s) 294, 941
BmrFI CCNGG 1 cut(s) 320
BmrI ACTGGG 1 cut(s) 227
BmsI GCATC 2 cut(s) 820, 982
BmuI ACTGGG 1 cut(s) 227
Bpu10I CCTNAGC 1 cut(s) 270
BpuEI CTTGAG 2 cut(s) 49, 522
BsaHI GRCGYC 2 cut(s) 603, 1083
BsaI GGTCTC 1 cut(s) 53
BsaJI CCNNGG 1 cut(s) 331
BsaWI WCCGGW 2 cut(s) 140, 646
Bsc4I CCNNNNNNNGG 2 cut(s) 238, 845
Bse118I RCCGGY 1 cut(s) 1079
Bse1I ACTGG 1 cut(s) 233
Bse21I CCTNAGG 1 cut(s) 396
BseBI CCWGG 1 cut(s) 320
BseDI CCNNGG 1 cut(s) 331
BseGI GGATG 1 cut(s) 771
BseLI CCNNNNNNNGG 2 cut(s) 238, 845
BseMII CTCAG 4 cut(s) 261, 571, 594, 605
BseNI ACTGG 1 cut(s) 233
BseSI GKGCMC 2 cut(s) 342, 740
BseXI GCAGC 2 cut(s) 378, 892
BshFI GGCC 3 cut(s) 98, 296, 410
BsiHKCI CYCGRG 1 cut(s) 716
BsiSI CCGG 3 cut(s) 141, 647, 1080
BslFI GGGAC 1 cut(s) 140
BslI CCNNNNNNNGG 2 cut(s) 238, 845
BsmAI GTCTC 3 cut(s) 53, 296, 489
BsmFI GGGAC 1 cut(s) 140
BsnI GGCC 3 cut(s) 98, 296, 410
Bso31I GGTCTC 1 cut(s) 53
BsoBI CYCGRG 1 cut(s) 716
Bsp1286I GDGCHC 3 cut(s) 342, 642, 740
Bsp143I GATC 9 cut(s) 129, 184, 241, 276, 532, 649, 724, 855, 871
Bsp19I CCATGG 1 cut(s) 331
BspACI CCGC 3 cut(s) 69, 219, 297
BspANI GGCC 3 cut(s) 98, 296, 410
BspCNI CTCAG 4 cut(s) 262, 570, 593, 604
BspPI GGATC 5 cut(s) 137, 179, 249, 527, 657
BspTI CTTAAG 1 cut(s) 92
BspTNI GGTCTC 1 cut(s) 53
BsrFI RCCGGY 1 cut(s) 1079
BsrI ACTGG 1 cut(s) 233
BssAI RCCGGY 1 cut(s) 1079
BssECI CCNNGG 1 cut(s) 331
BssMI GATC 9 cut(s) 129, 184, 241, 276, 532, 649, 724, 855, 871
BssNI GRCGYC 2 cut(s) 603, 1083
BssSI CACGAG 3 cut(s) 375, 386, 981
BssT1I CCWWGG 1 cut(s) 331
Bst2BI CACGAG 3 cut(s) 375, 386, 981
Bst2UI CCWGG 1 cut(s) 320
Bst4CI ACNGT 1 cut(s) 520
BstACI GRCGYC 2 cut(s) 603, 1083
BstAFI CTTAAG 1 cut(s) 92
BstC8I GCNNGC 1 cut(s) 588
BstDEI CTNAG 5 cut(s) 270, 396, 557, 580, 591
BstDSI CCRYGG 1 cut(s) 331
BstEII GGTNACC 1 cut(s) 52
BstF5I GGATG 1 cut(s) 771
BstH2I RGCGCY 2 cut(s) 635, 854
BstHHI GCGC 2 cut(s) 634, 853
BstKTI GATC 9 cut(s) 132, 187, 244, 279, 535, 652, 727, 858, 874
BstMAI GTCTC 3 cut(s) 53, 296, 489
BstMBI GATC 9 cut(s) 129, 184, 241, 276, 532, 649, 724, 855, 871
BstMWI GCNNNNNNNGC 2 cut(s) 377, 850
BstNI CCWGG 1 cut(s) 320
BstNSI RCATGY 2 cut(s) 469, 590
BstPI GGTNACC 1 cut(s) 52
BstSCI CCNGG 1 cut(s) 318
BstSLI GKGCMC 2 cut(s) 342, 740
BstV1I GCAGC 2 cut(s) 378, 892
BstX2I RGATCY 3 cut(s) 184, 241, 871
BstXI CCANNNNNNTGG 1 cut(s) 794
BstYI RGATCY 3 cut(s) 184, 241, 871
Bsu36I CCTNAGG 1 cut(s) 396
BsuI GTATCC 1 cut(s) 239
BsuRI GGCC 3 cut(s) 98, 296, 410
BtgI CCRYGG 1 cut(s) 331
BtsCI GGATG 1 cut(s) 771
BtsIMutI CAGTG 1 cut(s) 240
Cac8I GCNNGC 1 cut(s) 588
CfoI GCGC 2 cut(s) 634, 853
Cfr10I RCCGGY 1 cut(s) 1079
Cfr13I GGNCC 2 cut(s) 294, 941
CseI GACGC 3 cut(s) 68, 592, 1072
Csp6I GTAC 4 cut(s) 25, 415, 448, 577
CspCI CAANNNNNGTGG 2 cut(s) 803, 838
CviAII CATG 5 cut(s) 332, 364, 466, 587, 711
CviQI GTAC 4 cut(s) 25, 415, 448, 577
DdeI CTNAG 5 cut(s) 270, 396, 557, 580, 591
DpnI GATC 9 cut(s) 131, 186, 243, 278, 534, 651, 726, 857, 873
DpnII GATC 9 cut(s) 129, 184, 241, 276, 532, 649, 724, 855, 871
DraI TTTAAA 1 cut(s) 1134
DraIII CACNNNGTG 1 cut(s) 922
DriI GACNNNNNGTC 1 cut(s) 17
Eam1105I GACNNNNNGTC 1 cut(s) 17
Eco130I CCWWGG 1 cut(s) 331
Eco147I AGGCCT 1 cut(s) 98
Eco24I GRGCYC 1 cut(s) 642
Eco31I GGTCTC 1 cut(s) 53
Eco47I GGWCC 1 cut(s) 941
Eco47III AGCGCT 2 cut(s) 633, 852
Eco57I CTGAAG 1 cut(s) 648
Eco81I CCTNAGG 1 cut(s) 396
Eco88I CYCGRG 1 cut(s) 716
Eco91I GGTNACC 1 cut(s) 52
EcoO65I GGTNACC 1 cut(s) 52
EcoRII CCWGG 1 cut(s) 318
EcoT14I CCWWGG 1 cut(s) 331
EcoT38I GRGCYC 1 cut(s) 642
ErhI CCWWGG 1 cut(s) 331
FaeI CATG 5 cut(s) 335, 367, 469, 590, 714
FaqI GGGAC 1 cut(s) 140
FatI CATG 5 cut(s) 331, 363, 465, 586, 710
FauNDI CATATG 1 cut(s) 684
FbaI TGATCA 1 cut(s) 855
Fnu4HI GCNGC 3 cut(s) 297, 392, 881
FokI GGATG 1 cut(s) 758
FriOI GRGCYC 1 cut(s) 642
Fsp4HI GCNGC 3 cut(s) 297, 392, 881
FspBI CTAG 2 cut(s) 456, 1124
GlaI GCGC 2 cut(s) 633, 852
GluI GCNGC 3 cut(s) 297, 392, 881
HaeII RGCGCY 2 cut(s) 635, 854
HaeIII GGCC 3 cut(s) 98, 296, 410
HapII CCGG 3 cut(s) 141, 647, 1080
HgaI GACGC 3 cut(s) 68, 592, 1072
HhaI GCGC 2 cut(s) 634, 853
Hin1I GRCGYC 2 cut(s) 603, 1083
Hin1II CATG 5 cut(s) 335, 367, 469, 590, 714
Hin6I GCGC 2 cut(s) 632, 851
HinP1I GCGC 2 cut(s) 632, 851
HincII GTYRAC 1 cut(s) 1023
HindII GTYRAC 1 cut(s) 1023
HinfI GANTC 6 cut(s) 18, 107, 144, 373, 688, 798
HpaII CCGG 3 cut(s) 141, 647, 1080
HphI GGTGA 5 cut(s) 46, 139, 286, 415, 445
Hpy166II GTNNAC 3 cut(s) 328, 797, 1023
Hpy188III TCNNGA 5 cut(s) 74, 386, 539, 983, 1119
Hpy8I GTNNAC 3 cut(s) 328, 797, 1023
Hpy99I CGWCG 2 cut(s) 107, 137
HpyAV CCTTC 5 cut(s) 109, 400, 433, 932, 1025
HpyCH4III ACNGT 1 cut(s) 520
HpyCH4V TGCA 6 cut(s) 85, 505, 674, 811, 880, 973
HpyF10VI GCNNNNNNNGC 2 cut(s) 377, 850
HpyF3I CTNAG 5 cut(s) 270, 396, 557, 580, 591
Hsp92I GRCGYC 2 cut(s) 603, 1083
Hsp92II CATG 5 cut(s) 335, 367, 469, 590, 714
HspAI GCGC 2 cut(s) 632, 851
Ksp22I TGATCA 1 cut(s) 855
Kzo9I GATC 9 cut(s) 129, 184, 241, 276, 532, 649, 724, 855, 871
LmnI GCTCC 1 cut(s) 848
Lsp1109I GCAGC 2 cut(s) 378, 892
LweI GCATC 2 cut(s) 820, 982
MaeI CTAG 2 cut(s) 456, 1124
MaeIII GTNAC 4 cut(s) 52, 604, 832, 1075
MalI GATC 9 cut(s) 131, 186, 243, 278, 534, 651, 726, 857, 873
MboI GATC 9 cut(s) 129, 184, 241, 276, 532, 649, 724, 855, 871
MboII GAAGA 1 cut(s) 307
MflI RGATCY 3 cut(s) 184, 241, 871
MhlI GDGCHC 3 cut(s) 342, 642, 740
MluCI AATT 7 cut(s) 162, 487, 596, 617, 789, 948, 1044
MlyI GAGTC 3 cut(s) 27, 367, 792
MseI TTAA 5 cut(s) 93, 509, 693, 828, 1133
MspCI CTTAAG 1 cut(s) 92
MspI CCGG 3 cut(s) 141, 647, 1080
MspR9I CCNGG 1 cut(s) 320
MvaI CCWGG 1 cut(s) 320
MwoI GCNNNNNNNGC 2 cut(s) 377, 850
NcoI CCATGG 1 cut(s) 331
NdeI CATATG 1 cut(s) 684
NdeII GATC 9 cut(s) 129, 184, 241, 276, 532, 649, 724, 855, 871
NlaIII CATG 5 cut(s) 335, 367, 469, 590, 714
NmeAIII GCCGAG 1 cut(s) 436
NmuCI GTSAC 2 cut(s) 52, 604
NspI RCATGY 2 cut(s) 469, 590
PaeI GCATGC 1 cut(s) 590
PceI AGGCCT 1 cut(s) 98
PciI ACATGT 1 cut(s) 465
PfeI GAWTC 3 cut(s) 107, 144, 688
PkrI GCNGC 3 cut(s) 298, 393, 882
PleI GAGTC 3 cut(s) 26, 367, 792
PpsI GAGTC 3 cut(s) 26, 367, 792
PscI ACATGT 1 cut(s) 465
PshBI ATTAAT 1 cut(s) 828
Psp6I CCWGG 1 cut(s) 318
PspEI GGTNACC 1 cut(s) 52
PspGI CCWGG 1 cut(s) 318
PspPI GGNCC 2 cut(s) 294, 941
PsuI RGATCY 3 cut(s) 184, 241, 871
RsaI GTAC 4 cut(s) 26, 416, 449, 578
RsaNI GTAC 4 cut(s) 25, 415, 448, 577
SaqAI TTAA 5 cut(s) 93, 509, 693, 828, 1133
SatI GCNGC 3 cut(s) 297, 392, 881
Sau3AI GATC 9 cut(s) 129, 184, 241, 276, 532, 649, 724, 855, 871
Sau96I GGNCC 2 cut(s) 294, 941
ScaI AGTACT 3 cut(s) 416, 449, 578
SchI GAGTC 3 cut(s) 27, 367, 792
ScrFI CCNGG 1 cut(s) 320
SduI GDGCHC 3 cut(s) 342, 642, 740
SfaNI GCATC 2 cut(s) 820, 982
SinI GGWCC 1 cut(s) 941
SmlI CTYRAG 3 cut(s) 64, 92, 537
SmoI CTYRAG 3 cut(s) 64, 92, 537
SphI GCATGC 1 cut(s) 590
Sse9I AATT 7 cut(s) 162, 487, 596, 617, 789, 948, 1044
SseBI AGGCCT 1 cut(s) 98
SsiI CCGC 3 cut(s) 69, 219, 297
SspMI CTAG 2 cut(s) 456, 1124
StuI AGGCCT 1 cut(s) 98
StyD4I CCNGG 1 cut(s) 318
StyI CCWWGG 1 cut(s) 331
TaaI ACNGT 1 cut(s) 520
TaqI TCGA 4 cut(s) 16, 102, 135, 279
TasI AATT 7 cut(s) 162, 487, 596, 617, 789, 948, 1044
TatI WGTACW 3 cut(s) 414, 447, 576
TauI GCSGC 1 cut(s) 299
TfiI GAWTC 3 cut(s) 107, 144, 688
Tru1I TTAA 5 cut(s) 93, 509, 693, 828, 1133
Tru9I TTAA 5 cut(s) 93, 509, 693, 828, 1133
TscAI CASTG 1 cut(s) 240
TseFI GTSAC 2 cut(s) 52, 604
TseI GCWGC 2 cut(s) 391, 880
Tsp45I GTSAC 2 cut(s) 52, 604
TspGWI ACGGA 1 cut(s) 161
TspRI CASTG 1 cut(s) 240
Vha464I CTTAAG 1 cut(s) 92
VpaK11BI GGWCC 1 cut(s) 941
VspI ATTAAT 1 cut(s) 828
XapI RAATTY 1 cut(s) 948
XceI RCATGY 2 cut(s) 469, 590
XspI CTAG 2 cut(s) 456, 1124
ZrmI AGTACT 3 cut(s) 416, 449, 578
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.