Rroxscaffold_5G00337220

Belongs to the iron ascorbate-dependent oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0000054
Physical Location & Seq
Forward (+)
5255131 .. 5257193
2063 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00337220.1

Sequence Viewer

Length: 1098 bp
ATGGTGGCCAACAGAAATGAGGTTCCAACCAACTATGACAGAAAACATGAACTAAAAGCTTTTGATGATACAAAGGAAGGTGTTAAAGGCCTTGTTGATGCTGGAATAACCGAGATTCCTCGAATTTTTTATCATCCACCCGATGAGTACTCCATTGACAATACCTCTGATTCAGAAGTGCAGTGTAGCATTCCAGTCATAGACATCGAAGGCCTCTTCGATCGAACTAAACGAAAGGAGATTGTTGCAGCAGTTGGAGAAGCATCAGAGACTTGGGGATTCTTTCAAATTTCCAATCATGGAATACCTTTTGATGTGCTGGAGGAGATGAAGGATGGGGTACGTGGGTTTTATGAGCAGGATACTGAAGTGAAGAAACAGTATTATTCTCGTGCTGACTCCAGTAGTACAGTCCTCTACAACAGCAACTTTGATCTGTATAGTGCACCGGCAACTAGTTGGAGGGATAGTTTGCTGTGTTATATGGCTCCTACTCCTCCTAAGAAAGAAGACTTTCCAGAAGTATGCAGAGAAATTCTTGTTGAATACTCGAAGCAAGTAATGAAGTTGGGGAAGCTATTGTTTGAGTTGTTGTCCGAGGCTCTTGGGCTAAATCCAAGTCACTTGAATGACATAGATTGCAGTGAGGGGCTTATGGTTTTAGGCCATTACTATCCTGCTTGTCCACAACCAGAGTTAACAATAGGCTTAAGCAAGCATACAGATAATAACTTCATGACTGTCCTTCTGCAAGATAATATTGGTGGTCTTCAAGTCCTTCATCAGAACAAATGGATTGATGTACCCCATGTACCGGGTGCTTTAGTGGTGAACATCGGAGATTTTCTTATATCAAATGACAGATTCAAGAGTGTAGAGCACAGGGTACTGGCAAACCATAGAGGTCCCAGGGTATCAGTTGCAAGCTTTTTCAGCACAGGATTGCTGCCATCGACAAAGCTCTACGGACCCATCAAGGAGTTATTATCAGAAGACAATCCTCCAAAGTATAGGGAGACCACTGCAAGGGACTATAATGCCTACTATGTTAAAAAAGGCCTCGATGGGAAATCTACCTTGTCTCATTTGAAGCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2OG-FeII_Oxy DIOX_N

Protein Analysis

365

Amino Acids

41.16

Weight (kDa)

5.35

Isoelectric Point (pI)

38.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 64 - 163 3.9e-19 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 219 - 312 8.8e-32 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000054)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03400 AT1G03400 AT1G03410 AT1G03410 AT1G04350 AT1G06620 AT1G06620 AT1G06640 AT1G06640 AT1G06640 AT1G06645 AT1G06650 AT1G06650 AT2G25450 AT2G30830 AT2G30840 AT2G30840 AT2G30840 AT3G61400 AT3G61400 AT5G43440 AT5G43440 AT5G43450 AT5G43450 AT5G59530 AT5G59540 AT5G59540
fragaria_vesca FvH4_2g03190 FvH4_2g03220 FvH4_3g07861 FvH4_3g31880 FvH4_3g31880 FvH4_3g31880 FvH4_4g03241 FvH4_4g03250 FvH4_4g03251 FvH4_4g03260 FvH4_4g03300 FvH4_4g03301 FvH4_4g03301 FvH4_4g03301 FvH4_4g03302 FvH4_4g03303 FvH4_4g03303 FvH4_4g03304 FvH4_4g03305 FvH4_4g03323 FvH4_4g03323 FvH4_5g19290 FvH4_5g19290 FvH4_5g19290 FvH4_5g19291 FvH4_5g19291 FvH4_5g19310 FvH4_5g19310 FvH4_5g19310 FvH4_5g19320 FvH4_5g19321 FvH4_5g19321 FvH4_5g19321 FvH4_7g31470
malus_domestica MD00G1220300.v1.1 MD02G1050800.v1.1 MD02G1053200.v1.1 MD02G1053300.v1.1 MD02G1054900.v1.1 MD03G1032300.v1.1 MD03G1245000.v1.1 MD03G1245300.v1.1 MD05G1014200.v1.1 MD13G1210900.v1.1 MD13G1211000.v1.1 MD13G1211100.v1.1 MD13G1211200.v1.1 MD13G1211800.v1.1 MD13G1211900.v1.1 MD13G1212000.v1.1 MD16G1214100.v1.1 MD16G1214300.v1.1 MD16G1214400.v1.1 MD16G1214600.v1.1 MD16G1215000.v1.1 MD16G1215200.v1.1 MD16G1215300.v1.1 MD16G1215500.v1.1 MD16G1271000.v1.1
prunus_persica Prupe.1G035500_v2.0.a1 Prupe.1G035700_v2.0.a1 Prupe.1G035800_v2.0.a1 Prupe.1G035900_v2.0.a1 Prupe.1G036000_v2.0.a1 Prupe.1G036100_v2.0.a1 Prupe.1G036200_v2.0.a1 Prupe.1G036400_v2.0.a1 Prupe.1G036500_v2.0.a1 Prupe.1G036600_v2.0.a1 Prupe.1G036700_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G191000_v2.0.a1 Prupe.1G191100_v2.0.a1
pyrus_communis pycom13g18340 pycom13g18350 pycom13g18380 pycom16g17990 pycom16g18010 pycom16g18020
rosa_chinensis RchiOBHm_Chr2g0124051 RchiOBHm_Chr4g0391811 RchiOBHm_Chr4g0391931 RchiOBHm_Chr4g0391961 RchiOBHm_Chr4g0391971 RchiOBHm_Chr4g0391981 RchiOBHm_Chr4g0391991 RchiOBHm_Chr4g0392031 RchiOBHm_Chr4g0392051 RchiOBHm_Chr4g0392061 RchiOBHm_Chr4g0392071 RchiOBHm_Chr4g0392081 RchiOBHm_Chr4g0392091 RchiOBHm_Chr4g0392111 RchiOBHm_Chr4g0392121 RchiOBHm_Chr4g0392131 RchiOBHm_Chr4g0392141 RchiOBHm_Chr4g0392151 RchiOBHm_Chr4g0392211 RchiOBHm_Chr4g0392251 RchiOBHm_Chr4g0392261 RchiOBHm_Chr4g0392301 RchiOBHm_Chr4g0392311 RchiOBHm_Chr4g0392341 RchiOBHm_Chr4g0409221 RchiOBHm_Chr4g0410991 RchiOBHm_Chr4g0429131 RchiOBHm_Chr4g0437051 RchiOBHm_Chr5g0038681 RchiOBHm_Chr5g0047071 RchiOBHm_Chr5g0058651 RchiOBHm_Chr6g0248121 RchiOBHm_Chr6g0248141 RchiOBHm_Chr6g0248291 RchiOBHm_Chr6g0248341 RchiOBHm_Chr6g0248351
rosa_laevigata RLG00000006473 RLG00000006475 RLG00000006667 RLG00000007095 RLG00000009819 RLG00000009820 RLG00000009821 RLG00000009822 RLG00000009825 RLG00000009826 RLG00000009830 RLG00000009831 RLG00000009832 RLG00000009833 RLG00000009834 RLG00000009835 RLG00000009837 RLG00000009838 RLG00000009839 RLG00000009841 RLG00000009842 RLG00000009844 RLG00000009845 RLG00000009846 RLG00000009847 RLG00000009848 RLG00000009849 RLG00000015160 RLG00000015161 RLG00000017791 RLG00000018779 RLG00000034461 RLG00000035237
rosa_multiflora Rmu_co8253791.1_g000001 Rmu_co8348827.1_g000001 Rmu_co8400489.1_g000001 Rmu_sc0000383.1_g000003 Rmu_sc0000383.1_g000005 Rmu_sc0000383.1_g000026 Rmu_sc0000846.1_g000012 Rmu_sc0001231.1_g000013 Rmu_sc0001231.1_g000026 Rmu_sc0001231.1_g000028 Rmu_sc0001800.1_g000027 Rmu_sc0003436.1_g000022 Rmu_sc0004104.1_g000004 Rmu_sc0004295.1_g000021 Rmu_sc0004295.1_g000031 Rmu_sc0004928.1_g000002 Rmu_sc0004928.1_g000008 Rmu_sc0004928.1_g000011 Rmu_sc0004928.1_g000027 Rmu_sc0004977.1_g000007 Rmu_sc0005018.1_g000002 Rmu_sc0005091.1_g000026 Rmu_sc0005091.1_g000032 Rmu_sc0005091.1_g000033 Rmu_sc0005817.1_g000003 Rmu_sc0005817.1_g000008 Rmu_sc0012482.1_g000002 Rmu_sc0014210.1_g000001 Rmu_sc0016150.1_g000001 Rmu_sc0029701.1_g000002 Rmu_sc0036585.1_g000001 Rmu_sc0037489.1_g000002
rosa_roxburghii Rroxscaffold_1G00021790 Rroxscaffold_1G00021800 Rroxscaffold_1G00034360 Rroxscaffold_2G00120130 Rroxscaffold_5G00337210 Rroxscaffold_5G00337220 Rroxscaffold_5G00337230 Rroxscaffold_5G00337250 Rroxscaffold_5G00337260 Rroxscaffold_5G00337270 Rroxscaffold_5G00337300 Rroxscaffold_5G00337310 Rroxscaffold_5G00337320 Rroxscaffold_5G00337330 Rroxscaffold_5G00337350 Rroxscaffold_5G00337370 Rroxscaffold_5G00337390 Rroxscaffold_5G00337400 Rroxscaffold_5G00337420 Rroxscaffold_5G00337430 Rroxscaffold_5G00337450 Rroxscaffold_5G00337470 Rroxscaffold_5G00337480 Rroxscaffold_5G00337520 Rroxscaffold_5G00378130 Rroxscaffold_6G00397800 Rroxscaffold_7G00213320 Rroxscaffold_7G00213390 Rroxscaffold_7G00213420 Rroxscaffold_7G00213470
rosa_rugosa Rorug02G0070100 Rorug02G0070100 Rorug02G0070100 Rorug02G0128600 Rorug02G0128700 Rorug02G0128800 Rorug02G0128900 Rorug02G0248400 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337100 Rorug03G0337200 Rorug03G0337300 Rorug03G0337600 Rorug03G0337700 Rorug03G0337800 Rorug03G0337900 Rorug03G0337900 Rorug03G0338000 Rorug03G0338100 Rorug03G0338200 Rorug04G0233200.1 Rorug04G0297900 Rorug05G0233700 Rorug05G0316700 Rorug05G0530800 Rorug05G0530900
rosa_samantha Rh2AG307400 Rh2BG316500 Rh2DG331200 Rh4AG039300 Rh4AG039400 Rh4AG039600 Rh4AG039700 Rh4AG039900 Rh4AG040000 Rh4AG040100 Rh4AG040300 Rh4AG040500 Rh4AG040700 Rh4AG041000 Rh4AG041100 Rh4AG041600 Rh4AG041800 Rh4AG041900 Rh4AG352400 Rh4BG033200 Rh4BG034100 Rh4BG034300 Rh4BG034700 Rh4BG034800 Rh4BG035200 Rh4BG035400 Rh4BG036000 Rh4BG036200 Rh4BG036300 Rh4BG036500 Rh4BG036800 Rh4BG361700 Rh4CG042000 Rh4CG042200 Rh4CG042300 Rh4CG042500 Rh4CG042600 Rh4CG042800 Rh4CG043200 Rh4CG043400 Rh4CG043500 Rh4CG043700 Rh4CG043800 Rh4CG044200 Rh4CG044500 Rh4CG044700 Rh4CG177000 Rh4CG310600 Rh4CG376000 Rh4DG036300 Rh4DG036900 Rh4DG037000 Rh4DG037100 Rh4DG037200 Rh4DG037300 Rh4DG037500 Rh4DG037700 Rh4DG037800 Rh4DG037900 Rh4DG038000 Rh4DG038200 Rh4DG038500 Rh4DG038700 Rh4DG038900 Rh4DG159600 Rh5CG347900 Rh5DG409900 Rh6AG045300 Rh6AG045800 Rh6AG046000 Rh6AG046100 Rh6BG040600 Rh6BG040700 Rh6BG042200 Rh6BG042700 Rh6BG042800 Rh6DG035900 Rh6DG036100 Rh6DG036200
rosa_wichuraiana Rw0G010420 Rw2G024780 Rw4G003020 Rw4G003070 Rw4G003080 Rw4G003090 Rw4G003100 Rw4G003130 Rw4G003140 Rw4G003150 Rw4G003180 Rw4G003190 Rw4G003200 Rw4G003210 Rw4G003220 Rw4G003240 Rw4G003270 Rw4G025050 Rw4G030850 Rw6G003930 Rw6G004000 Rw6G004030 Rw6G004040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 6
AcsI RAATTY 3 cut(s) 123, 288, 534
AcuI CTGAAG 1 cut(s) 387
AfaI GTAC 6 cut(s) 149, 342, 409, 804, 813, 888
AfiI CCNNNNNNNGG 2 cut(s) 814, 1026
AflII CTTAAG 1 cut(s) 709
AgsI TTSAA 6 cut(s) 287, 545, 628, 773, 868, 1090
AhlI ACTAGT 1 cut(s) 455
AjnI CCWGG 1 cut(s) 908
AluBI AGCT 5 cut(s) 59, 577, 927, 961, 1093
AluI AGCT 5 cut(s) 59, 577, 927, 961, 1093
Alw21I GWGCWC 2 cut(s) 448, 882
Alw26I GTCTC 3 cut(s) 263, 1010, 1086
Alw44I GTGCAC 1 cut(s) 444
AoxI GGCC 5 cut(s) 6, 88, 211, 664, 1057
ApaLI GTGCAC 1 cut(s) 444
ApeKI GCWGC 2 cut(s) 248, 946
ApoI RAATTY 3 cut(s) 123, 288, 534
Asp700I GAANNNNTTC 1 cut(s) 513
AspS9I GGNCC 2 cut(s) 905, 968
AsuC2I CCSGG 1 cut(s) 816
AsuHPI GGTGA 1 cut(s) 841
AvaII GGWCC 2 cut(s) 905, 968
BaeGI GKGCMC 1 cut(s) 448
BaeI ACNNNNGTAYC 4 cut(s) 332, 354, 365, 387
BalI TGGCCA 1 cut(s) 8
BauI CACGAG 1 cut(s) 390
BbsI GAAGAC 3 cut(s) 516, 761, 999
Bbv12I GWGCWC 2 cut(s) 448, 882
BbvI GCAGC 2 cut(s) 260, 933
BccI CCATC 4 cut(s) 329, 958, 980, 1058
BciT130I CCWGG 1 cut(s) 910
BciVI GTATCC 1 cut(s) 355
BcnI CCSGG 1 cut(s) 816
BcoDI GTCTC 3 cut(s) 263, 1010, 1086
BcuI ACTAGT 1 cut(s) 455
BfaI CTAG 1 cut(s) 456
BfrI CTTAAG 1 cut(s) 709
BfuI GTATCC 1 cut(s) 355
BisI GCNGC 2 cut(s) 249, 947
BlsI GCNGC 2 cut(s) 250, 948
BmcAI AGTACT 1 cut(s) 149
Bme1390I CCNGG 2 cut(s) 816, 910
Bme18I GGWCC 2 cut(s) 905, 968
BmgT120I GGNCC 2 cut(s) 905, 968
BmiI GGNNCC 4 cut(s) 24, 489, 907, 970
BmrFI CCNGG 2 cut(s) 816, 910
BmsI GCATC 2 cut(s) 88, 272
BpiI GAAGAC 3 cut(s) 516, 761, 999
BpmI CTGGAG 2 cut(s) 341, 385
BpuMI CCSGG 1 cut(s) 816
BsaAI YACGTR 1 cut(s) 344
BsaI GGTCTC 1 cut(s) 1010
BsaJI CCNNGG 3 cut(s) 597, 908, 909
BsaXI ACNNNNNCTCC 2 cut(s) 454, 484
Bsc4I CCNNNNNNNGG 2 cut(s) 814, 1026
Bse118I RCCGGY 1 cut(s) 448
Bse1I ACTGG 3 cut(s) 194, 402, 894
BseBI CCWGG 1 cut(s) 910
BseDI CCNNGG 3 cut(s) 597, 908, 909
BseGI GGATG 2 cut(s) 133, 340
BseLI CCNNNNNNNGG 2 cut(s) 814, 1026
BseNI ACTGG 3 cut(s) 194, 402, 894
BseRI GAGGAG 2 cut(s) 338, 486
BseSI GKGCMC 1 cut(s) 448
BseXI GCAGC 2 cut(s) 260, 933
BsgI GTGCAG 1 cut(s) 200
Bsh1285I CGRYCG 1 cut(s) 223
BshFI GGCC 5 cut(s) 8, 90, 213, 666, 1059
BsiEI CGRYCG 1 cut(s) 223
BsiHKAI GWGCWC 2 cut(s) 448, 882
BsiSI CCGG 2 cut(s) 449, 815
BslFI GGGAC 2 cut(s) 891, 1043
BslI CCNNNNNNNGG 2 cut(s) 814, 1026
BsmAI GTCTC 3 cut(s) 263, 1010, 1086
BsmFI GGGAC 2 cut(s) 891, 1043
BsmI GAATGC 1 cut(s) 189
BsnI GGCC 5 cut(s) 8, 90, 213, 666, 1059
Bso31I GGTCTC 1 cut(s) 1010
Bsp1286I GDGCHC 2 cut(s) 448, 882
Bsp143I GATC 2 cut(s) 220, 433
BspANI GGCC 5 cut(s) 8, 90, 213, 666, 1059
BspHI TCATGA 1 cut(s) 735
BspLI GGNNCC 4 cut(s) 24, 489, 907, 970
BspTI CTTAAG 1 cut(s) 709
BspTNI GGTCTC 1 cut(s) 1010
BsrFI RCCGGY 1 cut(s) 448
BsrI ACTGG 3 cut(s) 194, 402, 894
BssAI RCCGGY 1 cut(s) 448
BssECI CCNNGG 3 cut(s) 597, 908, 909
BssMI GATC 2 cut(s) 220, 433
BssSI CACGAG 1 cut(s) 390
Bst2BI CACGAG 1 cut(s) 390
Bst2UI CCWGG 1 cut(s) 910
Bst4CI ACNGT 3 cut(s) 381, 412, 742
Bst6I CTCTTC 1 cut(s) 221
BstAFI CTTAAG 1 cut(s) 709
BstBAI YACGTR 1 cut(s) 344
BstC8I GCNNGC 2 cut(s) 716, 925
BstDEI CTNAG 1 cut(s) 501
BstF5I GGATG 2 cut(s) 133, 340
BstKTI GATC 2 cut(s) 223, 436
BstMAI GTCTC 3 cut(s) 263, 1010, 1086
BstMBI GATC 2 cut(s) 220, 433
BstMCI CGRYCG 1 cut(s) 223
BstMWI GCNNNNNNNGC 1 cut(s) 933
BstNI CCWGG 1 cut(s) 910
BstSCI CCNGG 2 cut(s) 814, 908
BstSLI GKGCMC 1 cut(s) 448
BstV1I GCAGC 2 cut(s) 260, 933
BstV2I GAAGAC 3 cut(s) 516, 761, 999
BsuI GTATCC 1 cut(s) 355
BsuRI GGCC 5 cut(s) 8, 90, 213, 666, 1059
BtsCI GGATG 2 cut(s) 133, 340
BtsI GCAGTG 3 cut(s) 188, 649, 1020
BtsIMutI CAGTG 3 cut(s) 188, 649, 1020
Cac8I GCNNGC 2 cut(s) 716, 925
CciI TCATGA 1 cut(s) 735
Cfr10I RCCGGY 1 cut(s) 448
Cfr13I GGNCC 2 cut(s) 905, 968
Csp6I GTAC 6 cut(s) 148, 341, 408, 803, 812, 887
CviAII CATG 4 cut(s) 47, 299, 736, 809
CviQI GTAC 6 cut(s) 148, 341, 408, 803, 812, 887
DdeI CTNAG 1 cut(s) 501
DpnI GATC 2 cut(s) 222, 435
DpnII GATC 2 cut(s) 220, 433
EaeI YGGCCR 1 cut(s) 6
Eam1104I CTCTTC 1 cut(s) 221
EarI CTCTTC 1 cut(s) 221
Eco147I AGGCCT 3 cut(s) 90, 213, 1059
Eco31I GGTCTC 1 cut(s) 1010
Eco47I GGWCC 2 cut(s) 905, 968
Eco57I CTGAAG 1 cut(s) 387
EcoO109I RGGNCCY 1 cut(s) 905
EcoRII CCWGG 1 cut(s) 908
FaeI CATG 4 cut(s) 50, 302, 739, 812
FaqI GGGAC 2 cut(s) 891, 1043
FatI CATG 4 cut(s) 46, 298, 735, 808
Fnu4HI GCNGC 2 cut(s) 249, 947
FokI GGATG 2 cut(s) 120, 347
Fsp4HI GCNGC 2 cut(s) 249, 947
FspBI CTAG 1 cut(s) 456
GluI GCNGC 2 cut(s) 249, 947
GsuI CTGGAG 2 cut(s) 341, 385
HaeIII GGCC 5 cut(s) 8, 90, 213, 666, 1059
HapII CCGG 2 cut(s) 449, 815
Hin1II CATG 4 cut(s) 50, 302, 739, 812
HincII GTYRAC 1 cut(s) 699
HindII GTYRAC 1 cut(s) 699
HindIII AAGCTT 3 cut(s) 57, 925, 1091
HinfI GANTC 5 cut(s) 115, 170, 279, 398, 864
HpaI GTTAAC 1 cut(s) 699
HpaII CCGG 2 cut(s) 449, 815
HphI GGTGA 1 cut(s) 841
Hpy166II GTNNAC 4 cut(s) 446, 686, 699, 832
Hpy188I TCNGA 7 cut(s) 169, 175, 268, 598, 786, 839, 991
Hpy188III TCNNGA 3 cut(s) 518, 736, 868
Hpy8I GTNNAC 4 cut(s) 446, 686, 699, 832
HpyAV CCTTC 5 cut(s) 71, 203, 325, 755, 788
HpyCH4III ACNGT 3 cut(s) 381, 412, 742
HpyCH4IV ACGT 1 cut(s) 343
HpyCH4V TGCA 8 cut(s) 181, 248, 446, 528, 642, 751, 923, 1025
HpyF10VI GCNNNNNNNGC 1 cut(s) 933
HpyF3I CTNAG 1 cut(s) 501
HpySE526I ACGT 1 cut(s) 343
Hsp92II CATG 4 cut(s) 50, 302, 739, 812
KspAI GTTAAC 1 cut(s) 699
Kzo9I GATC 2 cut(s) 220, 433
LmnI GCTCC 1 cut(s) 493
Lsp1109I GCAGC 2 cut(s) 260, 933
LweI GCATC 2 cut(s) 88, 272
MaeI CTAG 1 cut(s) 456
MaeII ACGT 1 cut(s) 343
MaeIII GTNAC 1 cut(s) 620
MalI GATC 2 cut(s) 222, 435
MboI GATC 2 cut(s) 220, 433
MboII GAAGA 5 cut(s) 208, 385, 521, 761, 1004
MhlI GDGCHC 2 cut(s) 448, 882
MlsI TGGCCA 1 cut(s) 8
MluCI AATT 3 cut(s) 123, 288, 534
MluNI TGGCCA 1 cut(s) 8
MlyI GAGTC 1 cut(s) 392
MmeI TCCRAC 3 cut(s) 50, 235, 440
Mox20I TGGCCA 1 cut(s) 8
MroXI GAANNNNTTC 1 cut(s) 513
MscI TGGCCA 1 cut(s) 8
MseI TTAA 4 cut(s) 84, 698, 710, 1050
MslI CAYNNNNRTG 1 cut(s) 627
Msp20I TGGCCA 1 cut(s) 8
MspCI CTTAAG 1 cut(s) 709
MspI CCGG 2 cut(s) 449, 815
MspR9I CCNGG 2 cut(s) 816, 910
Mva1269I GAATGC 1 cut(s) 189
MvaI CCWGG 1 cut(s) 910
MwoI GCNNNNNNNGC 1 cut(s) 933
NciI CCSGG 1 cut(s) 816
NdeII GATC 2 cut(s) 220, 433
NlaIII CATG 4 cut(s) 50, 302, 739, 812
NlaIV GGNNCC 4 cut(s) 24, 489, 907, 970
NmuCI GTSAC 1 cut(s) 620
PagI TCATGA 1 cut(s) 735
PasI CCCWGGG 1 cut(s) 909
PceI AGGCCT 3 cut(s) 90, 213, 1059
PcsI WCGNNNNNNNCGW 1 cut(s) 229
PctI GAATGC 1 cut(s) 189
PdmI GAANNNNTTC 1 cut(s) 513
PfeI GAWTC 4 cut(s) 115, 170, 279, 864
PkrI GCNGC 2 cut(s) 250, 948
Ple19I CGATCG 1 cut(s) 223
PleI GAGTC 1 cut(s) 392
PpsI GAGTC 1 cut(s) 392
Ppu21I YACGTR 1 cut(s) 344
PpuMI RGGWCCY 1 cut(s) 905
Psp5II RGGWCCY 1 cut(s) 905
Psp6I CCWGG 1 cut(s) 908
PspGI CCWGG 1 cut(s) 908
PspN4I GGNNCC 4 cut(s) 24, 489, 907, 970
PspPI GGNCC 2 cut(s) 905, 968
PspPPI RGGWCCY 1 cut(s) 905
PvuI CGATCG 1 cut(s) 223
RsaI GTAC 6 cut(s) 149, 342, 409, 804, 813, 888
RsaNI GTAC 6 cut(s) 148, 341, 408, 803, 812, 887
RseI CAYNNNNRTG 1 cut(s) 627
SaqAI TTAA 4 cut(s) 84, 698, 710, 1050
SatI GCNGC 2 cut(s) 249, 947
Sau3AI GATC 2 cut(s) 220, 433
Sau96I GGNCC 2 cut(s) 905, 968
ScaI AGTACT 1 cut(s) 149
SchI GAGTC 1 cut(s) 392
ScrFI CCNGG 2 cut(s) 816, 910
SduI GDGCHC 2 cut(s) 448, 882
SfaNI GCATC 2 cut(s) 88, 272
SinI GGWCC 2 cut(s) 905, 968
SmiMI CAYNNNNRTG 1 cut(s) 627
SmlI CTYRAG 1 cut(s) 709
SmoI CTYRAG 1 cut(s) 709
SpeI ACTAGT 1 cut(s) 455
Sse9I AATT 3 cut(s) 123, 288, 534
SseBI AGGCCT 3 cut(s) 90, 213, 1059
SspI AATATT 1 cut(s) 760
SspMI CTAG 1 cut(s) 456
StuI AGGCCT 3 cut(s) 90, 213, 1059
StyD4I CCNGG 2 cut(s) 814, 908
TaaI ACNGT 3 cut(s) 381, 412, 742
TaiI ACGT 1 cut(s) 346
TaqI TCGA 7 cut(s) 121, 207, 219, 223, 551, 953, 1062
TasI AATT 3 cut(s) 123, 288, 534
TatI WGTACW 2 cut(s) 147, 407
TfiI GAWTC 4 cut(s) 115, 170, 279, 864
Tru1I TTAA 4 cut(s) 84, 698, 710, 1050
Tru9I TTAA 4 cut(s) 84, 698, 710, 1050
TscAI CASTG 3 cut(s) 188, 649, 1027
TseFI GTSAC 1 cut(s) 620
TseI GCWGC 2 cut(s) 248, 946
Tsp45I GTSAC 1 cut(s) 620
TspDTI ATGAA 5 cut(s) 63, 344, 578, 724, 770
TspGWI ACGGA 1 cut(s) 981
TspRI CASTG 3 cut(s) 188, 649, 1027
Vha464I CTTAAG 1 cut(s) 709
VneI GTGCAC 1 cut(s) 444
VpaK11BI GGWCC 2 cut(s) 905, 968
XapI RAATTY 3 cut(s) 123, 288, 534
XmnI GAANNNNTTC 1 cut(s) 513
XspI CTAG 1 cut(s) 456
ZrmI AGTACT 1 cut(s) 149
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.