Rh4CG043200

Belongs to the iron ascorbate-dependent oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
OG0000054
Physical Location & Seq
Forward (+)
8696665 .. 8699399
2735 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG043200.1

Sequence Viewer

Length: 1179 bp
ATGATCTTATCCAAAAGAAATAGTACCCTCTCATTCCCACAAAAGATATTGCAGAAAACAAAAATGATGCTCACAACAACCTCCAGTGATGGATTCAACTACGACAGGAAAAGTGAGTTGAAGGCTTTAGATGACTCAAAAGCTGGTGTTAAGGGACTCGTAGATGCTGGTTTGGCGAAGATACCAAGGATTTTCATCCATGAACAACAGAAGCTCAACAAAGCAACCAGTCCTTGTGATGGTTCCAACTTCAGTATCCCAGTCATAAGCTTAGAGGGCATCAACCAAGATCCAACTGTACGTGCTCGTGTTATCGAACAAGTTCGACATGCTTGCGAGAGTTGGGGGTTTTTCCAGGTGGTCAACCATGGGATTCCAGTCCATGATTTGGAGGAGATGATCGATGGGATAAGGAGATTTCATGAGCAAGACCAAGAAGTGAAGAAGGAATTATATTCAAGGGACTATACCAACAAACTCGTTTATTATAATACTAATTTTGATCTTTATCAATCGCCTGCAGCTAATTGGAGGGATACTCTGTCATGTGTTATGGCACCTCGTGCTCCCAATCTTGAAGAGTTGCCTAGAGTTTGCAGGGATATAATGCTTGATTACTCGGAAAAAGTGAAGGCTTTAGGAGCCACTTTATTTGAATTATTGTCTGAAGCACTTGGGCTCAATCCCAACCACCTGAAGGACTTGAGCTGCGCAGAGGGCCTATTCTTTCTTGGCCATTACTACCCAGCATGCCCTGAACCAGAATTGACCATGGGCACAACTCAACATTCTGATAGTAGCTTCCTCACAGTGCTCCTACAGGACCAAATTGGTGGCCTCCAAGTCCTCCATGAAGATCAGTGGGTGGATGTTACCCCAGTCCGGGGAGCTCTAGTTGTAAATCTTGGAGACATGTTACAGTTAATCTCAAATGACAAGTTCATTAGTGTCAATCACAGAGTGTTGGCCAAAAATGTTGGTCCAAGAATTTCCGTGGCGTGTTTTTTTAGACAACATCTTCCACCAGAAAATTCTTCCAGGTTGTATAGGCCAATTAAGGAGTTGGTGTCAGACAAGAATCCTCCAATTTACCGAGAGACCACCATCAAAGATTTTGTTGCGCACTACTATACTAAAGGGCTCAATGGTGTCTCGGCATTGGAATATTTGAAGCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2OG-FeII_Oxy DIOX_N

Protein Analysis

392

Amino Acids

44.36

Weight (kDa)

6.47

Isoelectric Point (pI)

41.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 86 - 186 2.7e-20 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 245 - 337 4.4e-31 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000054)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03400 AT1G03400 AT1G03410 AT1G03410 AT1G04350 AT1G06620 AT1G06620 AT1G06640 AT1G06640 AT1G06640 AT1G06645 AT1G06650 AT1G06650 AT2G25450 AT2G30830 AT2G30840 AT2G30840 AT2G30840 AT3G61400 AT3G61400 AT5G43440 AT5G43440 AT5G43450 AT5G43450 AT5G59530 AT5G59540 AT5G59540
fragaria_vesca FvH4_2g03190 FvH4_2g03220 FvH4_3g07861 FvH4_3g31880 FvH4_3g31880 FvH4_3g31880 FvH4_4g03241 FvH4_4g03250 FvH4_4g03251 FvH4_4g03260 FvH4_4g03300 FvH4_4g03301 FvH4_4g03301 FvH4_4g03301 FvH4_4g03302 FvH4_4g03303 FvH4_4g03303 FvH4_4g03304 FvH4_4g03305 FvH4_4g03323 FvH4_4g03323 FvH4_5g19290 FvH4_5g19290 FvH4_5g19290 FvH4_5g19291 FvH4_5g19291 FvH4_5g19310 FvH4_5g19310 FvH4_5g19310 FvH4_5g19320 FvH4_5g19321 FvH4_5g19321 FvH4_5g19321 FvH4_7g31470
malus_domestica MD00G1220300.v1.1 MD02G1050800.v1.1 MD02G1053200.v1.1 MD02G1053300.v1.1 MD02G1054900.v1.1 MD03G1032300.v1.1 MD03G1245000.v1.1 MD03G1245300.v1.1 MD05G1014200.v1.1 MD13G1210900.v1.1 MD13G1211000.v1.1 MD13G1211100.v1.1 MD13G1211200.v1.1 MD13G1211800.v1.1 MD13G1211900.v1.1 MD13G1212000.v1.1 MD16G1214100.v1.1 MD16G1214300.v1.1 MD16G1214400.v1.1 MD16G1214600.v1.1 MD16G1215000.v1.1 MD16G1215200.v1.1 MD16G1215300.v1.1 MD16G1215500.v1.1 MD16G1271000.v1.1
prunus_persica Prupe.1G035500_v2.0.a1 Prupe.1G035700_v2.0.a1 Prupe.1G035800_v2.0.a1 Prupe.1G035900_v2.0.a1 Prupe.1G036000_v2.0.a1 Prupe.1G036100_v2.0.a1 Prupe.1G036200_v2.0.a1 Prupe.1G036400_v2.0.a1 Prupe.1G036500_v2.0.a1 Prupe.1G036600_v2.0.a1 Prupe.1G036700_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G191000_v2.0.a1 Prupe.1G191100_v2.0.a1
pyrus_communis pycom13g18340 pycom13g18350 pycom13g18380 pycom16g17990 pycom16g18010 pycom16g18020
rosa_chinensis RchiOBHm_Chr2g0124051 RchiOBHm_Chr4g0391811 RchiOBHm_Chr4g0391931 RchiOBHm_Chr4g0391961 RchiOBHm_Chr4g0391971 RchiOBHm_Chr4g0391981 RchiOBHm_Chr4g0391991 RchiOBHm_Chr4g0392031 RchiOBHm_Chr4g0392051 RchiOBHm_Chr4g0392061 RchiOBHm_Chr4g0392071 RchiOBHm_Chr4g0392081 RchiOBHm_Chr4g0392091 RchiOBHm_Chr4g0392111 RchiOBHm_Chr4g0392121 RchiOBHm_Chr4g0392131 RchiOBHm_Chr4g0392141 RchiOBHm_Chr4g0392151 RchiOBHm_Chr4g0392211 RchiOBHm_Chr4g0392251 RchiOBHm_Chr4g0392261 RchiOBHm_Chr4g0392301 RchiOBHm_Chr4g0392311 RchiOBHm_Chr4g0392341 RchiOBHm_Chr4g0409221 RchiOBHm_Chr4g0410991 RchiOBHm_Chr4g0429131 RchiOBHm_Chr4g0437051 RchiOBHm_Chr5g0038681 RchiOBHm_Chr5g0047071 RchiOBHm_Chr5g0058651 RchiOBHm_Chr6g0248121 RchiOBHm_Chr6g0248141 RchiOBHm_Chr6g0248291 RchiOBHm_Chr6g0248341 RchiOBHm_Chr6g0248351
rosa_laevigata RLG00000006473 RLG00000006475 RLG00000006667 RLG00000007095 RLG00000009819 RLG00000009820 RLG00000009821 RLG00000009822 RLG00000009825 RLG00000009826 RLG00000009830 RLG00000009831 RLG00000009832 RLG00000009833 RLG00000009834 RLG00000009835 RLG00000009837 RLG00000009838 RLG00000009839 RLG00000009841 RLG00000009842 RLG00000009844 RLG00000009845 RLG00000009846 RLG00000009847 RLG00000009848 RLG00000009849 RLG00000015160 RLG00000015161 RLG00000017791 RLG00000018779 RLG00000034461 RLG00000035237
rosa_multiflora Rmu_co8253791.1_g000001 Rmu_co8348827.1_g000001 Rmu_co8400489.1_g000001 Rmu_sc0000383.1_g000003 Rmu_sc0000383.1_g000005 Rmu_sc0000383.1_g000026 Rmu_sc0000846.1_g000012 Rmu_sc0001231.1_g000013 Rmu_sc0001231.1_g000026 Rmu_sc0001231.1_g000028 Rmu_sc0001800.1_g000027 Rmu_sc0003436.1_g000022 Rmu_sc0004104.1_g000004 Rmu_sc0004295.1_g000021 Rmu_sc0004295.1_g000031 Rmu_sc0004928.1_g000002 Rmu_sc0004928.1_g000008 Rmu_sc0004928.1_g000011 Rmu_sc0004928.1_g000027 Rmu_sc0004977.1_g000007 Rmu_sc0005018.1_g000002 Rmu_sc0005091.1_g000026 Rmu_sc0005091.1_g000032 Rmu_sc0005091.1_g000033 Rmu_sc0005817.1_g000003 Rmu_sc0005817.1_g000008 Rmu_sc0012482.1_g000002 Rmu_sc0014210.1_g000001 Rmu_sc0016150.1_g000001 Rmu_sc0029701.1_g000002 Rmu_sc0036585.1_g000001 Rmu_sc0037489.1_g000002
rosa_roxburghii Rroxscaffold_1G00021790 Rroxscaffold_1G00021800 Rroxscaffold_1G00034360 Rroxscaffold_2G00120130 Rroxscaffold_5G00337210 Rroxscaffold_5G00337220 Rroxscaffold_5G00337230 Rroxscaffold_5G00337250 Rroxscaffold_5G00337260 Rroxscaffold_5G00337270 Rroxscaffold_5G00337300 Rroxscaffold_5G00337310 Rroxscaffold_5G00337320 Rroxscaffold_5G00337330 Rroxscaffold_5G00337350 Rroxscaffold_5G00337370 Rroxscaffold_5G00337390 Rroxscaffold_5G00337400 Rroxscaffold_5G00337420 Rroxscaffold_5G00337430 Rroxscaffold_5G00337450 Rroxscaffold_5G00337470 Rroxscaffold_5G00337480 Rroxscaffold_5G00337520 Rroxscaffold_5G00378130 Rroxscaffold_6G00397800 Rroxscaffold_7G00213320 Rroxscaffold_7G00213390 Rroxscaffold_7G00213420 Rroxscaffold_7G00213470
rosa_rugosa Rorug02G0070100 Rorug02G0070100 Rorug02G0070100 Rorug02G0128600 Rorug02G0128700 Rorug02G0128800 Rorug02G0128900 Rorug02G0248400 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337100 Rorug03G0337200 Rorug03G0337300 Rorug03G0337600 Rorug03G0337700 Rorug03G0337800 Rorug03G0337900 Rorug03G0337900 Rorug03G0338000 Rorug03G0338100 Rorug03G0338200 Rorug04G0233200.1 Rorug04G0297900 Rorug05G0233700 Rorug05G0316700 Rorug05G0530800 Rorug05G0530900
rosa_samantha Rh2AG307400 Rh2BG316500 Rh2DG331200 Rh4AG039300 Rh4AG039400 Rh4AG039600 Rh4AG039700 Rh4AG039900 Rh4AG040000 Rh4AG040100 Rh4AG040300 Rh4AG040500 Rh4AG040700 Rh4AG041000 Rh4AG041100 Rh4AG041600 Rh4AG041800 Rh4AG041900 Rh4AG352400 Rh4BG033200 Rh4BG034100 Rh4BG034300 Rh4BG034700 Rh4BG034800 Rh4BG035200 Rh4BG035400 Rh4BG036000 Rh4BG036200 Rh4BG036300 Rh4BG036500 Rh4BG036800 Rh4BG361700 Rh4CG042000 Rh4CG042200 Rh4CG042300 Rh4CG042500 Rh4CG042600 Rh4CG042800 Rh4CG043200 Rh4CG043400 Rh4CG043500 Rh4CG043700 Rh4CG043800 Rh4CG044200 Rh4CG044500 Rh4CG044700 Rh4CG177000 Rh4CG310600 Rh4CG376000 Rh4DG036300 Rh4DG036900 Rh4DG037000 Rh4DG037100 Rh4DG037200 Rh4DG037300 Rh4DG037500 Rh4DG037700 Rh4DG037800 Rh4DG037900 Rh4DG038000 Rh4DG038200 Rh4DG038500 Rh4DG038700 Rh4DG038900 Rh4DG159600 Rh5CG347900 Rh5DG409900 Rh6AG045300 Rh6AG045800 Rh6AG046000 Rh6AG046100 Rh6BG040600 Rh6BG040700 Rh6BG042200 Rh6BG042700 Rh6BG042800 Rh6DG035900 Rh6DG036100 Rh6DG036200
rosa_wichuraiana Rw0G010420 Rw2G024780 Rw4G003020 Rw4G003070 Rw4G003080 Rw4G003090 Rw4G003100 Rw4G003130 Rw4G003140 Rw4G003150 Rw4G003180 Rw4G003190 Rw4G003200 Rw4G003210 Rw4G003220 Rw4G003240 Rw4G003270 Rw4G025050 Rw4G030850 Rw6G003930 Rw6G004000 Rw6G004030 Rw6G004040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 489
Acc16I TGCGCA 2 cut(s) 712, 1122
AccB1I GGYRCC 1 cut(s) 556
AccB7I CCANNNNNTGG 1 cut(s) 388
AclWI GGATC 1 cut(s) 284
AcoI YGGCCR 2 cut(s) 733, 966
AcsI RAATTY 2 cut(s) 987, 1030
AcuI CTGAAG 3 cut(s) 235, 687, 716
AdeI CACNNNGTG 2 cut(s) 563, 961
AfaI GTAC 2 cut(s) 25, 300
AfiI CCNNNNNNNGG 6 cut(s) 239, 388, 697, 882, 883, 884
AflIII ACRYGT 1 cut(s) 912
AgsI TTSAA 6 cut(s) 97, 121, 459, 578, 656, 1171
AjnI CCWGG 2 cut(s) 354, 1037
AluBI AGCT 8 cut(s) 143, 214, 270, 524, 708, 801, 890, 1174
AluI AGCT 8 cut(s) 143, 214, 270, 524, 708, 801, 890, 1174
Alw21I GWGCWC 4 cut(s) 307, 568, 816, 892
Alw26I GTCTC 3 cut(s) 903, 1091, 1156
AlwI GGATC 1 cut(s) 284
AoxI GGCC 5 cut(s) 718, 733, 835, 966, 1049
ApeKI GCWGC 2 cut(s) 521, 708
ApoI RAATTY 2 cut(s) 987, 1030
Asp700I GAANNNNTTC 1 cut(s) 321
AspLEI GCGC 2 cut(s) 713, 1123
AspS9I GGNCC 3 cut(s) 718, 823, 980
AsuC2I CCSGG 1 cut(s) 884
AvaII GGWCC 2 cut(s) 823, 980
BaeGI GKGCMC 1 cut(s) 779
BaeI ACNNNNGTAYC 2 cut(s) 238, 271
BalI TGGCCA 2 cut(s) 735, 968
BanI GGYRCC 1 cut(s) 556
BanII GRGCYC 3 cut(s) 681, 892, 1143
BauI CACGAG 2 cut(s) 306, 561
Bbv12I GWGCWC 4 cut(s) 307, 568, 816, 892
BbvI GCAGC 2 cut(s) 533, 695
BccI CCATC 4 cut(s) 83, 233, 398, 1112
BcgI CGANNNNNNTGC 2 cut(s) 315, 349
BciT130I CCWGG 2 cut(s) 356, 1039
BciVI GTATCC 2 cut(s) 266, 529
BcnI CCSGG 1 cut(s) 884
BcoDI GTCTC 3 cut(s) 903, 1091, 1156
BfaI CTAG 2 cut(s) 588, 893
BfmI CTRYAG 2 cut(s) 519, 818
BfuI GTATCC 2 cut(s) 266, 529
BisI GCNGC 2 cut(s) 522, 709
BlsI GCNGC 2 cut(s) 523, 710
Bme1390I CCNGG 3 cut(s) 356, 884, 1039
Bme18I GGWCC 2 cut(s) 823, 980
BmgT120I GGNCC 3 cut(s) 718, 823, 980
BmiI GGNNCC 3 cut(s) 244, 558, 643
BmrFI CCNGG 3 cut(s) 356, 884, 1039
BmrI ACTGGG 2 cut(s) 254, 872
BmsI GCATC 3 cut(s) 57, 154, 288
BmuI ACTGGG 2 cut(s) 254, 872
BplI GAGNNNNNCTC 2 cut(s) 523, 555
BpmI CTGGAG 1 cut(s) 67
BpuEI CTTGAG 1 cut(s) 724
BpuMI CCSGG 1 cut(s) 884
Bsa29I ATCGAT 1 cut(s) 402
BsaAI YACGTR 1 cut(s) 302
BsaBI GATNNNNATC 2 cut(s) 194, 507
BsaI GGTCTC 1 cut(s) 1091
BsaJI CCNNGG 5 cut(s) 185, 367, 771, 883, 993
BsaXI ACNNNNNCTCC 4 cut(s) 879, 909, 1052, 1082
Bsc4I CCNNNNNNNGG 6 cut(s) 239, 388, 697, 882, 883, 884
Bse1I ACTGG 5 cut(s) 84, 228, 260, 377, 878
Bse8I GATNNNNATC 2 cut(s) 194, 507
BseBI CCWGG 2 cut(s) 356, 1039
BseCI ATCGAT 1 cut(s) 402
BseDI CCNNGG 5 cut(s) 185, 367, 771, 883, 993
BseGI GGATG 2 cut(s) 195, 874
BseJI GATNNNNATC 2 cut(s) 194, 507
BseLI CCNNNNNNNGG 6 cut(s) 239, 388, 697, 882, 883, 884
BseNI ACTGG 5 cut(s) 84, 228, 260, 377, 878
BseRI GAGGAG 1 cut(s) 407
BseSI GKGCMC 1 cut(s) 779
BseXI GCAGC 2 cut(s) 533, 695
BseYI CCCAGC 1 cut(s) 745
BshFI GGCC 5 cut(s) 720, 735, 837, 968, 1051
BshNI GGYRCC 1 cut(s) 556
BshVI ATCGAT 1 cut(s) 402
BsiHKAI GWGCWC 4 cut(s) 307, 568, 816, 892
BsiSI CCGG 1 cut(s) 883
BslFI GGGAC 2 cut(s) 168, 476
BslI CCNNNNNNNGG 6 cut(s) 239, 388, 697, 882, 883, 884
BsmAI GTCTC 3 cut(s) 903, 1091, 1156
BsmFI GGGAC 2 cut(s) 168, 476
BsnI GGCC 5 cut(s) 720, 735, 837, 968, 1051
Bso31I GGTCTC 1 cut(s) 1091
Bsp1286I GDGCHC 7 cut(s) 307, 568, 681, 779, 816, 892, 1143
Bsp143I GATC 5 cut(s) 3, 289, 399, 502, 856
Bsp19I CCATGG 2 cut(s) 367, 771
BspANI GGCC 5 cut(s) 720, 735, 837, 968, 1051
BspDI ATCGAT 1 cut(s) 402
BspHI TCATGA 1 cut(s) 421
BspLI GGNNCC 3 cut(s) 244, 558, 643
BspMAI CTGCAG 1 cut(s) 523
BspPI GGATC 1 cut(s) 284
BspT107I GGYRCC 1 cut(s) 556
BspTNI GGTCTC 1 cut(s) 1091
BsrI ACTGG 5 cut(s) 84, 228, 260, 377, 878
BssECI CCNNGG 5 cut(s) 185, 367, 771, 883, 993
BssMI GATC 5 cut(s) 3, 289, 399, 502, 856
BssSI CACGAG 2 cut(s) 306, 561
BssT1I CCWWGG 3 cut(s) 185, 367, 771
Bst2BI CACGAG 2 cut(s) 306, 561
Bst2UI CCWGG 2 cut(s) 356, 1039
Bst4CI ACNGT 3 cut(s) 298, 811, 921
Bst6I CTCTTC 1 cut(s) 573
BstAPI GCANNNNNTGC 1 cut(s) 563
BstBAI YACGTR 1 cut(s) 302
BstC8I GCNNGC 3 cut(s) 334, 519, 751
BstDEI CTNAG 1 cut(s) 271
BstDSI CCRYGG 3 cut(s) 367, 771, 993
BstF5I GGATG 2 cut(s) 195, 874
BstHHI GCGC 2 cut(s) 713, 1123
BstKTI GATC 5 cut(s) 6, 292, 402, 505, 859
BstMAI GTCTC 3 cut(s) 903, 1091, 1156
BstMBI GATC 5 cut(s) 3, 289, 399, 502, 856
BstMWI GCNNNNNNNGC 5 cut(s) 173, 276, 563, 641, 717
BstNI CCWGG 2 cut(s) 356, 1039
BstNSI RCATGY 3 cut(s) 332, 753, 916
BstSCI CCNGG 3 cut(s) 354, 882, 1037
BstSFI CTRYAG 2 cut(s) 519, 818
BstSLI GKGCMC 1 cut(s) 779
BstV1I GCAGC 2 cut(s) 533, 695
BstX2I RGATCY 1 cut(s) 289
BstXI CCANNNNNNTGG 1 cut(s) 833
BstYI RGATCY 1 cut(s) 289
Bsu15I ATCGAT 1 cut(s) 402
BsuI GTATCC 2 cut(s) 266, 529
BsuRI GGCC 5 cut(s) 720, 735, 837, 968, 1051
BsuTUI ATCGAT 1 cut(s) 402
BtgI CCRYGG 3 cut(s) 367, 771, 993
BtsCI GGATG 2 cut(s) 195, 874
BtsIMutI CAGTG 3 cut(s) 91, 816, 866
Cac8I GCNNGC 3 cut(s) 334, 519, 751
CciI TCATGA 1 cut(s) 421
CfoI GCGC 2 cut(s) 713, 1123
Cfr13I GGNCC 3 cut(s) 718, 823, 980
ClaI ATCGAT 1 cut(s) 402
Csp6I GTAC 2 cut(s) 24, 299
CspCI CAANNNNNGTGG 2 cut(s) 634, 669
CviQI GTAC 2 cut(s) 24, 299
DdeI CTNAG 1 cut(s) 271
DpnI GATC 5 cut(s) 5, 291, 401, 504, 858
DpnII GATC 5 cut(s) 3, 289, 399, 502, 856
DraIII CACNNNGTG 2 cut(s) 563, 961
EaeI YGGCCR 2 cut(s) 733, 966
Eam1104I CTCTTC 1 cut(s) 573
EarI CTCTTC 1 cut(s) 573
Ecl136II GAGCTC 1 cut(s) 890
Eco130I CCWWGG 3 cut(s) 185, 367, 771
Eco24I GRGCYC 3 cut(s) 681, 892, 1143
Eco31I GGTCTC 1 cut(s) 1091
Eco47I GGWCC 2 cut(s) 823, 980
Eco53kI GAGCTC 1 cut(s) 890
Eco57I CTGAAG 3 cut(s) 235, 687, 716
EcoICRI GAGCTC 1 cut(s) 890
EcoO109I RGGNCCY 1 cut(s) 718
EcoRII CCWGG 2 cut(s) 354, 1037
EcoT14I CCWWGG 3 cut(s) 185, 367, 771
EcoT38I GRGCYC 3 cut(s) 681, 892, 1143
ErhI CCWWGG 3 cut(s) 185, 367, 771
FaqI GGGAC 2 cut(s) 168, 476
Fnu4HI GCNGC 2 cut(s) 522, 709
FokI GGATG 2 cut(s) 182, 881
FriOI GRGCYC 3 cut(s) 681, 892, 1143
Fsp4HI GCNGC 2 cut(s) 522, 709
FspBI CTAG 2 cut(s) 588, 893
FspI TGCGCA 2 cut(s) 712, 1122
GlaI GCGC 2 cut(s) 712, 1122
GluI GCNGC 2 cut(s) 522, 709
GsaI CCCAGC 1 cut(s) 749
GsuI CTGGAG 1 cut(s) 67
HaeIII GGCC 5 cut(s) 720, 735, 837, 968, 1051
HapII CCGG 1 cut(s) 883
HhaI GCGC 2 cut(s) 713, 1123
Hin6I GCGC 2 cut(s) 711, 1121
HinP1I GCGC 2 cut(s) 711, 1121
HincII GTYRAC 1 cut(s) 364
HindII GTYRAC 1 cut(s) 364
HindIII AAGCTT 2 cut(s) 268, 1172
HinfI GANTC 5 cut(s) 93, 134, 156, 373, 1078
HpaII CCGG 1 cut(s) 883
Hpy166II GTNNAC 1 cut(s) 364
Hpy188I TCNGA 4 cut(s) 622, 667, 793, 1072
Hpy188III TCNNGA 2 cut(s) 422, 575
Hpy8I GTNNAC 1 cut(s) 364
HpyAV CCTTC 4 cut(s) 115, 439, 625, 691
HpyCH4III ACNGT 3 cut(s) 298, 811, 921
HpyCH4IV ACGT 1 cut(s) 301
HpyCH4V TGCA 3 cut(s) 52, 521, 597
HpyF10VI GCNNNNNNNGC 5 cut(s) 173, 276, 563, 641, 717
HpyF3I CTNAG 1 cut(s) 271
HpySE526I ACGT 1 cut(s) 301
HspAI GCGC 2 cut(s) 711, 1121
Kzo9I GATC 5 cut(s) 3, 289, 399, 502, 856
LmnI GCTCC 4 cut(s) 571, 641, 819, 887
Lsp1109I GCAGC 2 cut(s) 533, 695
LweI GCATC 3 cut(s) 57, 154, 288
MaeI CTAG 2 cut(s) 588, 893
MaeII ACGT 1 cut(s) 301
MaeIII GTNAC 2 cut(s) 871, 915
MalI GATC 5 cut(s) 5, 291, 401, 504, 858
MboI GATC 5 cut(s) 3, 289, 399, 502, 856
MboII GAAGA 6 cut(s) 190, 454, 590, 866, 1010, 1026
MflI RGATCY 1 cut(s) 289
MhlI GDGCHC 7 cut(s) 307, 568, 681, 779, 816, 892, 1143
MlsI TGGCCA 2 cut(s) 735, 968
MluNI TGGCCA 2 cut(s) 735, 968
MlyI GAGTC 2 cut(s) 128, 150
MmeI TCCRAC 2 cut(s) 270, 317
Mox20I TGGCCA 2 cut(s) 735, 968
MroXI GAANNNNTTC 1 cut(s) 321
MscI TGGCCA 2 cut(s) 735, 968
MseI TTAA 3 cut(s) 150, 923, 1056
Msp20I TGGCCA 2 cut(s) 735, 968
MspI CCGG 1 cut(s) 883
MspR9I CCNGG 3 cut(s) 356, 884, 1039
MvaI CCWGG 2 cut(s) 356, 1039
MwoI GCNNNNNNNGC 5 cut(s) 173, 276, 563, 641, 717
NciI CCSGG 1 cut(s) 884
NcoI CCATGG 2 cut(s) 367, 771
NdeII GATC 5 cut(s) 3, 289, 399, 502, 856
NlaIV GGNNCC 3 cut(s) 244, 558, 643
NmeAIII GCCGAG 1 cut(s) 1133
NsbI TGCGCA 2 cut(s) 712, 1122
NspI RCATGY 3 cut(s) 332, 753, 916
PaeI GCATGC 1 cut(s) 753
PagI TCATGA 1 cut(s) 421
PciI ACATGT 1 cut(s) 912
PdmI GAANNNNTTC 1 cut(s) 321
PfeI GAWTC 3 cut(s) 93, 373, 1078
PflMI CCANNNNNTGG 1 cut(s) 388
PkrI GCNGC 2 cut(s) 523, 710
PleI GAGTC 2 cut(s) 128, 150
PpsI GAGTC 2 cut(s) 128, 150
Ppu21I YACGTR 1 cut(s) 302
PscI ACATGT 1 cut(s) 912
PsiI TTATAA 1 cut(s) 489
Psp124BI GAGCTC 1 cut(s) 892
Psp6I CCWGG 2 cut(s) 354, 1037
PspFI CCCAGC 1 cut(s) 745
PspGI CCWGG 2 cut(s) 354, 1037
PspN4I GGNNCC 3 cut(s) 244, 558, 643
PspPI GGNCC 3 cut(s) 718, 823, 980
PstI CTGCAG 1 cut(s) 523
PsuI RGATCY 1 cut(s) 289
RsaI GTAC 2 cut(s) 25, 300
RsaNI GTAC 2 cut(s) 24, 299
SacI GAGCTC 1 cut(s) 892
SaqAI TTAA 3 cut(s) 150, 923, 1056
SatI GCNGC 2 cut(s) 522, 709
Sau3AI GATC 5 cut(s) 3, 289, 399, 502, 856
Sau96I GGNCC 3 cut(s) 718, 823, 980
SchI GAGTC 2 cut(s) 128, 150
ScrFI CCNGG 3 cut(s) 356, 884, 1039
SduI GDGCHC 7 cut(s) 307, 568, 681, 779, 816, 892, 1143
SfaNI GCATC 3 cut(s) 57, 154, 288
SfcI CTRYAG 2 cut(s) 519, 818
SinI GGWCC 2 cut(s) 823, 980
SmlI CTYRAG 1 cut(s) 703
SmoI CTYRAG 1 cut(s) 703
SphI GCATGC 1 cut(s) 753
SspI AATATT 1 cut(s) 1166
SspMI CTAG 2 cut(s) 588, 893
SstI GAGCTC 1 cut(s) 892
StyD4I CCNGG 3 cut(s) 354, 882, 1037
StyI CCWWGG 3 cut(s) 185, 367, 771
TaaI ACNGT 3 cut(s) 298, 811, 921
TaiI ACGT 1 cut(s) 304
TaqI TCGA 3 cut(s) 315, 325, 402
TfiI GAWTC 3 cut(s) 93, 373, 1078
Tru1I TTAA 3 cut(s) 150, 923, 1056
Tru9I TTAA 3 cut(s) 150, 923, 1056
TscAI CASTG 3 cut(s) 91, 816, 866
TseI GCWGC 2 cut(s) 521, 708
TspDTI ATGAA 5 cut(s) 184, 216, 410, 867, 931
TspGWI ACGGA 1 cut(s) 982
TspRI CASTG 3 cut(s) 91, 816, 866
Van91I CCANNNNNTGG 1 cut(s) 388
VpaK11BI GGWCC 2 cut(s) 823, 980
XapI RAATTY 2 cut(s) 987, 1030
XceI RCATGY 3 cut(s) 332, 753, 916
XmnI GAANNNNTTC 1 cut(s) 321
XspI CTAG 2 cut(s) 588, 893
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.