Rroxscaffold_5G00337350

Belongs to the iron ascorbate-dependent oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0000054
Physical Location & Seq
Forward (+)
5418366 .. 5420417
2052 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00337350.1

Sequence Viewer

Length: 1137 bp
ATGGTGCTCACAACAACCTCCGGTGATGGATTCAACTACGAAAGGAAAAGTGAGTTGAAGGCTTTAGACGACTCAAAAGCTGGTGTTAAGGGACTCGTAGATGCTGGTTTGGCTAAGATACCAAGGATTTTCATCCATGAACAACAGAAGCTCAACAAAGCAACCAGTCCTGGTGATGGTTCCAACTTCAGTATCCCAGTCATAAGCTTAGAGGGCATTAACCAAGATCCAACTGTACGTGCTCGTGTTATCGAACAAGTTCGACATGCTTGCGAGAGTTGGGGGTTCTTCCAGGTGGTCAACCATGGGATTCCAGTCCATGATTTGGAGGAGATGATCGATGGGATAAGGAGATTTCATGAGCAAGACCAAGAAGTGAAGAAGGAATTATATTCAAGGGACTATACCAACAAACTCGTTTATTATAATACTAATTTTGATCTATATCAATCGCCTGCAGCTAATTGGAGGGATACTCTGTCATGTGTTATGGCACCTCGTGCTCCCAATCTTGAAGAGTTGCCTAGAGTTTGCAGGGATATAATGCTTGATTACTCGGAAAAAGTGAAGGCTTTAGGAGCCACTTTATTTGAATTATTGTCTGAAGCACTTGGGCTCAATCCCAACTACCTCAAGGACTTGAGCTGCGCAGAGGGCTTATTCTTTCTTGGCCATTACTACCCAGCATGCCCTGAACCAGAATTGACCATGGGCACAACTCAACATTCTGATAGTAGCTTCCTGACAGTGCTCCTACAGGACCAAATTGGTGGCCTTCAAGTCCTCCATGAAGATCAGTGGGTGGATGTTACCCCAGTCCGTGGAGCTCTAGTTGTAAATCTTGGAGACATGTTACAGGCAATGTGTGCTTTGGTGCAGTTAATCTCAAATGACAAGTTCATTAGTGTCAATCACAGAGTGTTGGCCAAAAATGTCGGTCCAAGAATTTCCGTGGCGTGTTTTTTTAGACAACATCTTCCACCGGAAAATTCTTCCAGGTTGTATAGGCCAATTAAGGAGTTGGTGTCAGACAAGAATCCTCCAATTTACCGAGAGACCACCATCAAAGATTTTGTTGCGCACTACTATACTAAAGGGCTCAATGGGGTCTCGGCATTGGAATATTTGAAGCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2OG-FeII_Oxy DIOX_N

Protein Analysis

378

Amino Acids

42.56

Weight (kDa)

5.8

Isoelectric Point (pI)

36.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 65 - 165 2.5e-20 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 224 - 323 2.1e-28 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000054)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03400 AT1G03400 AT1G03410 AT1G03410 AT1G04350 AT1G06620 AT1G06620 AT1G06640 AT1G06640 AT1G06640 AT1G06645 AT1G06650 AT1G06650 AT2G25450 AT2G30830 AT2G30840 AT2G30840 AT2G30840 AT3G61400 AT3G61400 AT5G43440 AT5G43440 AT5G43450 AT5G43450 AT5G59530 AT5G59540 AT5G59540
fragaria_vesca FvH4_2g03190 FvH4_2g03220 FvH4_3g07861 FvH4_3g31880 FvH4_3g31880 FvH4_3g31880 FvH4_4g03241 FvH4_4g03250 FvH4_4g03251 FvH4_4g03260 FvH4_4g03300 FvH4_4g03301 FvH4_4g03301 FvH4_4g03301 FvH4_4g03302 FvH4_4g03303 FvH4_4g03303 FvH4_4g03304 FvH4_4g03305 FvH4_4g03323 FvH4_4g03323 FvH4_5g19290 FvH4_5g19290 FvH4_5g19290 FvH4_5g19291 FvH4_5g19291 FvH4_5g19310 FvH4_5g19310 FvH4_5g19310 FvH4_5g19320 FvH4_5g19321 FvH4_5g19321 FvH4_5g19321 FvH4_7g31470
malus_domestica MD00G1220300.v1.1 MD02G1050800.v1.1 MD02G1053200.v1.1 MD02G1053300.v1.1 MD02G1054900.v1.1 MD03G1032300.v1.1 MD03G1245000.v1.1 MD03G1245300.v1.1 MD05G1014200.v1.1 MD13G1210900.v1.1 MD13G1211000.v1.1 MD13G1211100.v1.1 MD13G1211200.v1.1 MD13G1211800.v1.1 MD13G1211900.v1.1 MD13G1212000.v1.1 MD16G1214100.v1.1 MD16G1214300.v1.1 MD16G1214400.v1.1 MD16G1214600.v1.1 MD16G1215000.v1.1 MD16G1215200.v1.1 MD16G1215300.v1.1 MD16G1215500.v1.1 MD16G1271000.v1.1
prunus_persica Prupe.1G035500_v2.0.a1 Prupe.1G035700_v2.0.a1 Prupe.1G035800_v2.0.a1 Prupe.1G035900_v2.0.a1 Prupe.1G036000_v2.0.a1 Prupe.1G036100_v2.0.a1 Prupe.1G036200_v2.0.a1 Prupe.1G036400_v2.0.a1 Prupe.1G036500_v2.0.a1 Prupe.1G036600_v2.0.a1 Prupe.1G036700_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G191000_v2.0.a1 Prupe.1G191100_v2.0.a1
pyrus_communis pycom13g18340 pycom13g18350 pycom13g18380 pycom16g17990 pycom16g18010 pycom16g18020
rosa_chinensis RchiOBHm_Chr2g0124051 RchiOBHm_Chr4g0391811 RchiOBHm_Chr4g0391931 RchiOBHm_Chr4g0391961 RchiOBHm_Chr4g0391971 RchiOBHm_Chr4g0391981 RchiOBHm_Chr4g0391991 RchiOBHm_Chr4g0392031 RchiOBHm_Chr4g0392051 RchiOBHm_Chr4g0392061 RchiOBHm_Chr4g0392071 RchiOBHm_Chr4g0392081 RchiOBHm_Chr4g0392091 RchiOBHm_Chr4g0392111 RchiOBHm_Chr4g0392121 RchiOBHm_Chr4g0392131 RchiOBHm_Chr4g0392141 RchiOBHm_Chr4g0392151 RchiOBHm_Chr4g0392211 RchiOBHm_Chr4g0392251 RchiOBHm_Chr4g0392261 RchiOBHm_Chr4g0392301 RchiOBHm_Chr4g0392311 RchiOBHm_Chr4g0392341 RchiOBHm_Chr4g0409221 RchiOBHm_Chr4g0410991 RchiOBHm_Chr4g0429131 RchiOBHm_Chr4g0437051 RchiOBHm_Chr5g0038681 RchiOBHm_Chr5g0047071 RchiOBHm_Chr5g0058651 RchiOBHm_Chr6g0248121 RchiOBHm_Chr6g0248141 RchiOBHm_Chr6g0248291 RchiOBHm_Chr6g0248341 RchiOBHm_Chr6g0248351
rosa_laevigata RLG00000006473 RLG00000006475 RLG00000006667 RLG00000007095 RLG00000009819 RLG00000009820 RLG00000009821 RLG00000009822 RLG00000009825 RLG00000009826 RLG00000009830 RLG00000009831 RLG00000009832 RLG00000009833 RLG00000009834 RLG00000009835 RLG00000009837 RLG00000009838 RLG00000009839 RLG00000009841 RLG00000009842 RLG00000009844 RLG00000009845 RLG00000009846 RLG00000009847 RLG00000009848 RLG00000009849 RLG00000015160 RLG00000015161 RLG00000017791 RLG00000018779 RLG00000034461 RLG00000035237
rosa_multiflora Rmu_co8253791.1_g000001 Rmu_co8348827.1_g000001 Rmu_co8400489.1_g000001 Rmu_sc0000383.1_g000003 Rmu_sc0000383.1_g000005 Rmu_sc0000383.1_g000026 Rmu_sc0000846.1_g000012 Rmu_sc0001231.1_g000013 Rmu_sc0001231.1_g000026 Rmu_sc0001231.1_g000028 Rmu_sc0001800.1_g000027 Rmu_sc0003436.1_g000022 Rmu_sc0004104.1_g000004 Rmu_sc0004295.1_g000021 Rmu_sc0004295.1_g000031 Rmu_sc0004928.1_g000002 Rmu_sc0004928.1_g000008 Rmu_sc0004928.1_g000011 Rmu_sc0004928.1_g000027 Rmu_sc0004977.1_g000007 Rmu_sc0005018.1_g000002 Rmu_sc0005091.1_g000026 Rmu_sc0005091.1_g000032 Rmu_sc0005091.1_g000033 Rmu_sc0005817.1_g000003 Rmu_sc0005817.1_g000008 Rmu_sc0012482.1_g000002 Rmu_sc0014210.1_g000001 Rmu_sc0016150.1_g000001 Rmu_sc0029701.1_g000002 Rmu_sc0036585.1_g000001 Rmu_sc0037489.1_g000002
rosa_roxburghii Rroxscaffold_1G00021790 Rroxscaffold_1G00021800 Rroxscaffold_1G00034360 Rroxscaffold_2G00120130 Rroxscaffold_5G00337210 Rroxscaffold_5G00337220 Rroxscaffold_5G00337230 Rroxscaffold_5G00337250 Rroxscaffold_5G00337260 Rroxscaffold_5G00337270 Rroxscaffold_5G00337300 Rroxscaffold_5G00337310 Rroxscaffold_5G00337320 Rroxscaffold_5G00337330 Rroxscaffold_5G00337350 Rroxscaffold_5G00337370 Rroxscaffold_5G00337390 Rroxscaffold_5G00337400 Rroxscaffold_5G00337420 Rroxscaffold_5G00337430 Rroxscaffold_5G00337450 Rroxscaffold_5G00337470 Rroxscaffold_5G00337480 Rroxscaffold_5G00337520 Rroxscaffold_5G00378130 Rroxscaffold_6G00397800 Rroxscaffold_7G00213320 Rroxscaffold_7G00213390 Rroxscaffold_7G00213420 Rroxscaffold_7G00213470
rosa_rugosa Rorug02G0070100 Rorug02G0070100 Rorug02G0070100 Rorug02G0128600 Rorug02G0128700 Rorug02G0128800 Rorug02G0128900 Rorug02G0248400 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337100 Rorug03G0337200 Rorug03G0337300 Rorug03G0337600 Rorug03G0337700 Rorug03G0337800 Rorug03G0337900 Rorug03G0337900 Rorug03G0338000 Rorug03G0338100 Rorug03G0338200 Rorug04G0233200.1 Rorug04G0297900 Rorug05G0233700 Rorug05G0316700 Rorug05G0530800 Rorug05G0530900
rosa_samantha Rh2AG307400 Rh2BG316500 Rh2DG331200 Rh4AG039300 Rh4AG039400 Rh4AG039600 Rh4AG039700 Rh4AG039900 Rh4AG040000 Rh4AG040100 Rh4AG040300 Rh4AG040500 Rh4AG040700 Rh4AG041000 Rh4AG041100 Rh4AG041600 Rh4AG041800 Rh4AG041900 Rh4AG352400 Rh4BG033200 Rh4BG034100 Rh4BG034300 Rh4BG034700 Rh4BG034800 Rh4BG035200 Rh4BG035400 Rh4BG036000 Rh4BG036200 Rh4BG036300 Rh4BG036500 Rh4BG036800 Rh4BG361700 Rh4CG042000 Rh4CG042200 Rh4CG042300 Rh4CG042500 Rh4CG042600 Rh4CG042800 Rh4CG043200 Rh4CG043400 Rh4CG043500 Rh4CG043700 Rh4CG043800 Rh4CG044200 Rh4CG044500 Rh4CG044700 Rh4CG177000 Rh4CG310600 Rh4CG376000 Rh4DG036300 Rh4DG036900 Rh4DG037000 Rh4DG037100 Rh4DG037200 Rh4DG037300 Rh4DG037500 Rh4DG037700 Rh4DG037800 Rh4DG037900 Rh4DG038000 Rh4DG038200 Rh4DG038500 Rh4DG038700 Rh4DG038900 Rh4DG159600 Rh5CG347900 Rh5DG409900 Rh6AG045300 Rh6AG045800 Rh6AG046000 Rh6AG046100 Rh6BG040600 Rh6BG040700 Rh6BG042200 Rh6BG042700 Rh6BG042800 Rh6DG035900 Rh6DG036100 Rh6DG036200
rosa_wichuraiana Rw0G010420 Rw2G024780 Rw4G003020 Rw4G003070 Rw4G003080 Rw4G003090 Rw4G003100 Rw4G003130 Rw4G003140 Rw4G003150 Rw4G003180 Rw4G003190 Rw4G003200 Rw4G003210 Rw4G003220 Rw4G003240 Rw4G003270 Rw4G025050 Rw4G030850 Rw6G003930 Rw6G004000 Rw6G004030 Rw6G004040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 426
Acc16I TGCGCA 2 cut(s) 649, 1080
AccB1I GGYRCC 1 cut(s) 493
AccB7I CCANNNNNTGG 2 cut(s) 325, 821
AclWI GGATC 1 cut(s) 221
AcoI YGGCCR 2 cut(s) 670, 924
AcsI RAATTY 2 cut(s) 945, 988
AcuI CTGAAG 2 cut(s) 172, 624
AdeI CACNNNGTG 2 cut(s) 500, 919
AfaI GTAC 1 cut(s) 237
AfiI CCNNNNNNNGG 3 cut(s) 176, 325, 821
AflIII ACRYGT 1 cut(s) 849
AgsI TTSAA 7 cut(s) 34, 58, 396, 515, 593, 779, 1129
AjnI CCWGG 3 cut(s) 169, 291, 995
AluBI AGCT 8 cut(s) 80, 151, 207, 461, 645, 738, 827, 1132
AluI AGCT 8 cut(s) 80, 151, 207, 461, 645, 738, 827, 1132
Alw21I GWGCWC 5 cut(s) 9, 244, 505, 753, 829
Alw26I GTCTC 3 cut(s) 840, 1049, 1114
AlwI GGATC 1 cut(s) 221
AoxI GGCC 4 cut(s) 670, 772, 924, 1007
ApeKI GCWGC 2 cut(s) 458, 645
ApoI RAATTY 2 cut(s) 945, 988
Asp700I GAANNNNTTC 1 cut(s) 258
AspLEI GCGC 2 cut(s) 650, 1081
AspS9I GGNCC 2 cut(s) 760, 938
AsuHPI GGTGA 2 cut(s) 35, 185
AvaII GGWCC 2 cut(s) 760, 938
BaeGI GKGCMC 1 cut(s) 716
BaeI ACNNNNGTAYC 2 cut(s) 175, 208
BalI TGGCCA 2 cut(s) 672, 926
BanI GGYRCC 1 cut(s) 493
BanII GRGCYC 3 cut(s) 618, 829, 1101
BauI CACGAG 2 cut(s) 243, 498
Bbv12I GWGCWC 5 cut(s) 9, 244, 505, 753, 829
BbvI GCAGC 2 cut(s) 470, 632
BccI CCATC 4 cut(s) 20, 170, 335, 1070
BcgI CGANNNNNNTGC 2 cut(s) 252, 286
BciT130I CCWGG 3 cut(s) 171, 293, 997
BciVI GTATCC 2 cut(s) 203, 466
BcoDI GTCTC 3 cut(s) 840, 1049, 1114
BfaI CTAG 2 cut(s) 525, 830
BfmI CTRYAG 2 cut(s) 456, 755
BfuI GTATCC 2 cut(s) 203, 466
BisI GCNGC 2 cut(s) 459, 646
BlsI GCNGC 2 cut(s) 460, 647
Bme1390I CCNGG 3 cut(s) 171, 293, 997
Bme18I GGWCC 2 cut(s) 760, 938
BmgT120I GGNCC 2 cut(s) 760, 938
BmiI GGNNCC 3 cut(s) 181, 495, 580
BmrFI CCNGG 3 cut(s) 171, 293, 997
BmrI ACTGGG 2 cut(s) 191, 809
BmsI GCATC 1 cut(s) 91
BmuI ACTGGG 2 cut(s) 191, 809
BplI GAGNNNNNCTC 2 cut(s) 460, 492
BpuEI CTTGAG 2 cut(s) 617, 661
Bsa29I ATCGAT 1 cut(s) 339
BsaAI YACGTR 1 cut(s) 239
BsaBI GATNNNNATC 2 cut(s) 131, 444
BsaI GGTCTC 2 cut(s) 1049, 1114
BsaJI CCNNGG 5 cut(s) 122, 304, 708, 820, 951
BsaWI WCCGGW 2 cut(s) 20, 982
BsaXI ACNNNNNCTCC 4 cut(s) 816, 846, 1010, 1040
Bsc4I CCNNNNNNNGG 3 cut(s) 176, 325, 821
Bse1I ACTGG 4 cut(s) 165, 197, 314, 815
Bse3DI GCAATG 1 cut(s) 867
Bse8I GATNNNNATC 2 cut(s) 131, 444
BseBI CCWGG 3 cut(s) 171, 293, 997
BseCI ATCGAT 1 cut(s) 339
BseDI CCNNGG 5 cut(s) 122, 304, 708, 820, 951
BseGI GGATG 2 cut(s) 132, 811
BseJI GATNNNNATC 2 cut(s) 131, 444
BseLI CCNNNNNNNGG 3 cut(s) 176, 325, 821
BseMI GCAATG 1 cut(s) 867
BseNI ACTGG 4 cut(s) 165, 197, 314, 815
BseRI GAGGAG 1 cut(s) 344
BseSI GKGCMC 1 cut(s) 716
BseXI GCAGC 2 cut(s) 470, 632
BseYI CCCAGC 1 cut(s) 682
BsgI GTGCAG 1 cut(s) 896
BshFI GGCC 4 cut(s) 672, 774, 926, 1009
BshNI GGYRCC 1 cut(s) 493
BshVI ATCGAT 1 cut(s) 339
BsiHKAI GWGCWC 5 cut(s) 9, 244, 505, 753, 829
BsiSI CCGG 2 cut(s) 21, 983
BslFI GGGAC 2 cut(s) 105, 413
BslI CCNNNNNNNGG 3 cut(s) 176, 325, 821
BsmAI GTCTC 3 cut(s) 840, 1049, 1114
BsmFI GGGAC 2 cut(s) 105, 413
BsnI GGCC 4 cut(s) 672, 774, 926, 1009
Bso31I GGTCTC 2 cut(s) 1049, 1114
Bsp1286I GDGCHC 8 cut(s) 9, 244, 505, 618, 716, 753, 829, 1101
Bsp143I GATC 4 cut(s) 226, 336, 439, 793
Bsp19I CCATGG 2 cut(s) 304, 708
BspANI GGCC 4 cut(s) 672, 774, 926, 1009
BspDI ATCGAT 1 cut(s) 339
BspHI TCATGA 1 cut(s) 358
BspLI GGNNCC 3 cut(s) 181, 495, 580
BspMAI CTGCAG 1 cut(s) 460
BspPI GGATC 1 cut(s) 221
BspT107I GGYRCC 1 cut(s) 493
BspTNI GGTCTC 2 cut(s) 1049, 1114
BsrDI GCAATG 1 cut(s) 867
BsrI ACTGG 4 cut(s) 165, 197, 314, 815
BssECI CCNNGG 5 cut(s) 122, 304, 708, 820, 951
BssMI GATC 4 cut(s) 226, 336, 439, 793
BssSI CACGAG 2 cut(s) 243, 498
BssT1I CCWWGG 3 cut(s) 122, 304, 708
Bst2BI CACGAG 2 cut(s) 243, 498
Bst2UI CCWGG 3 cut(s) 171, 293, 997
Bst4CI ACNGT 2 cut(s) 235, 748
Bst6I CTCTTC 1 cut(s) 510
BstAPI GCANNNNNTGC 2 cut(s) 500, 866
BstBAI YACGTR 1 cut(s) 239
BstC8I GCNNGC 3 cut(s) 271, 456, 688
BstDEI CTNAG 2 cut(s) 114, 208
BstDSI CCRYGG 4 cut(s) 304, 708, 820, 951
BstF5I GGATG 2 cut(s) 132, 811
BstHHI GCGC 2 cut(s) 650, 1081
BstKTI GATC 4 cut(s) 229, 339, 442, 796
BstMAI GTCTC 3 cut(s) 840, 1049, 1114
BstMBI GATC 4 cut(s) 226, 336, 439, 793
BstMWI GCNNNNNNNGC 6 cut(s) 110, 213, 500, 578, 654, 866
BstNI CCWGG 3 cut(s) 171, 293, 997
BstNSI RCATGY 3 cut(s) 269, 690, 853
BstSCI CCNGG 3 cut(s) 169, 291, 995
BstSFI CTRYAG 2 cut(s) 456, 755
BstSLI GKGCMC 1 cut(s) 716
BstV1I GCAGC 2 cut(s) 470, 632
BstX2I RGATCY 1 cut(s) 226
BstXI CCANNNNNNTGG 1 cut(s) 770
BstYI RGATCY 1 cut(s) 226
Bsu15I ATCGAT 1 cut(s) 339
BsuI GTATCC 2 cut(s) 203, 466
BsuRI GGCC 4 cut(s) 672, 774, 926, 1009
BsuTUI ATCGAT 1 cut(s) 339
BtgI CCRYGG 4 cut(s) 304, 708, 820, 951
BtsCI GGATG 2 cut(s) 132, 811
BtsIMutI CAGTG 2 cut(s) 753, 803
Cac8I GCNNGC 3 cut(s) 271, 456, 688
CciI TCATGA 1 cut(s) 358
CfoI GCGC 2 cut(s) 650, 1081
Cfr13I GGNCC 2 cut(s) 760, 938
ClaI ATCGAT 1 cut(s) 339
Csp6I GTAC 1 cut(s) 236
CspCI CAANNNNNGTGG 2 cut(s) 571, 606
CviQI GTAC 1 cut(s) 236
DdeI CTNAG 2 cut(s) 114, 208
DpnI GATC 4 cut(s) 228, 338, 441, 795
DpnII GATC 4 cut(s) 226, 336, 439, 793
DraIII CACNNNGTG 2 cut(s) 500, 919
EaeI YGGCCR 2 cut(s) 670, 924
Eam1104I CTCTTC 1 cut(s) 510
EarI CTCTTC 1 cut(s) 510
Ecl136II GAGCTC 1 cut(s) 827
Eco130I CCWWGG 3 cut(s) 122, 304, 708
Eco24I GRGCYC 3 cut(s) 618, 829, 1101
Eco31I GGTCTC 2 cut(s) 1049, 1114
Eco47I GGWCC 2 cut(s) 760, 938
Eco53kI GAGCTC 1 cut(s) 827
Eco57I CTGAAG 2 cut(s) 172, 624
EcoICRI GAGCTC 1 cut(s) 827
EcoRII CCWGG 3 cut(s) 169, 291, 995
EcoT14I CCWWGG 3 cut(s) 122, 304, 708
EcoT38I GRGCYC 3 cut(s) 618, 829, 1101
ErhI CCWWGG 3 cut(s) 122, 304, 708
FaqI GGGAC 2 cut(s) 105, 413
Fnu4HI GCNGC 2 cut(s) 459, 646
FokI GGATG 2 cut(s) 119, 818
FriOI GRGCYC 3 cut(s) 618, 829, 1101
Fsp4HI GCNGC 2 cut(s) 459, 646
FspBI CTAG 2 cut(s) 525, 830
FspI TGCGCA 2 cut(s) 649, 1080
GlaI GCGC 2 cut(s) 649, 1080
GluI GCNGC 2 cut(s) 459, 646
GsaI CCCAGC 1 cut(s) 686
HaeIII GGCC 4 cut(s) 672, 774, 926, 1009
HapII CCGG 2 cut(s) 21, 983
HhaI GCGC 2 cut(s) 650, 1081
Hin6I GCGC 2 cut(s) 648, 1079
HinP1I GCGC 2 cut(s) 648, 1079
HincII GTYRAC 1 cut(s) 301
HindII GTYRAC 1 cut(s) 301
HindIII AAGCTT 2 cut(s) 205, 1130
HinfI GANTC 5 cut(s) 30, 71, 93, 310, 1036
HpaII CCGG 2 cut(s) 21, 983
HphI GGTGA 2 cut(s) 35, 185
Hpy166II GTNNAC 1 cut(s) 301
Hpy188I TCNGA 4 cut(s) 559, 604, 730, 1030
Hpy188III TCNNGA 3 cut(s) 359, 512, 742
Hpy8I GTNNAC 1 cut(s) 301
HpyAV CCTTC 4 cut(s) 52, 376, 562, 785
HpyCH4III ACNGT 2 cut(s) 235, 748
HpyCH4IV ACGT 1 cut(s) 238
HpyCH4V TGCA 3 cut(s) 458, 534, 877
HpyF10VI GCNNNNNNNGC 6 cut(s) 110, 213, 500, 578, 654, 866
HpyF3I CTNAG 2 cut(s) 114, 208
HpySE526I ACGT 1 cut(s) 238
HspAI GCGC 2 cut(s) 648, 1079
Kzo9I GATC 4 cut(s) 226, 336, 439, 793
LmnI GCTCC 4 cut(s) 508, 578, 756, 824
Lsp1109I GCAGC 2 cut(s) 470, 632
LweI GCATC 1 cut(s) 91
MaeI CTAG 2 cut(s) 525, 830
MaeII ACGT 1 cut(s) 238
MaeIII GTNAC 2 cut(s) 808, 852
MalI GATC 4 cut(s) 228, 338, 441, 795
MboI GATC 4 cut(s) 226, 336, 439, 793
MboII GAAGA 6 cut(s) 280, 391, 527, 803, 968, 984
MflI RGATCY 1 cut(s) 226
MhlI GDGCHC 8 cut(s) 9, 244, 505, 618, 716, 753, 829, 1101
MlsI TGGCCA 2 cut(s) 672, 926
MluNI TGGCCA 2 cut(s) 672, 926
MlyI GAGTC 2 cut(s) 65, 87
MmeI TCCRAC 2 cut(s) 207, 254
MnlI CCTC 9 cut(s) 28, 205, 322, 462, 507, 641, 646, 794, 1050
Mox20I TGGCCA 2 cut(s) 672, 926
MroXI GAANNNNTTC 1 cut(s) 258
MscI TGGCCA 2 cut(s) 672, 926
MseI TTAA 4 cut(s) 87, 219, 881, 1014
Msp20I TGGCCA 2 cut(s) 672, 926
MspI CCGG 2 cut(s) 21, 983
MspR9I CCNGG 3 cut(s) 171, 293, 997
MvaI CCWGG 3 cut(s) 171, 293, 997
MwoI GCNNNNNNNGC 6 cut(s) 110, 213, 500, 578, 654, 866
NcoI CCATGG 2 cut(s) 304, 708
NdeII GATC 4 cut(s) 226, 336, 439, 793
NlaIV GGNNCC 3 cut(s) 181, 495, 580
NmeAIII GCCGAG 1 cut(s) 1091
NsbI TGCGCA 2 cut(s) 649, 1080
NspI RCATGY 3 cut(s) 269, 690, 853
PaeI GCATGC 1 cut(s) 690
PagI TCATGA 1 cut(s) 358
PciI ACATGT 1 cut(s) 849
PdmI GAANNNNTTC 1 cut(s) 258
PfeI GAWTC 3 cut(s) 30, 310, 1036
PflMI CCANNNNNTGG 2 cut(s) 325, 821
PkrI GCNGC 2 cut(s) 460, 647
PleI GAGTC 2 cut(s) 65, 87
PpsI GAGTC 2 cut(s) 65, 87
Ppu21I YACGTR 1 cut(s) 239
PscI ACATGT 1 cut(s) 849
PsiI TTATAA 1 cut(s) 426
Psp124BI GAGCTC 1 cut(s) 829
Psp6I CCWGG 3 cut(s) 169, 291, 995
PspFI CCCAGC 1 cut(s) 682
PspGI CCWGG 3 cut(s) 169, 291, 995
PspN4I GGNNCC 3 cut(s) 181, 495, 580
PspPI GGNCC 2 cut(s) 760, 938
PstI CTGCAG 1 cut(s) 460
PsuI RGATCY 1 cut(s) 226
RsaI GTAC 1 cut(s) 237
RsaNI GTAC 1 cut(s) 236
SacI GAGCTC 1 cut(s) 829
SaqAI TTAA 4 cut(s) 87, 219, 881, 1014
SatI GCNGC 2 cut(s) 459, 646
Sau3AI GATC 4 cut(s) 226, 336, 439, 793
Sau96I GGNCC 2 cut(s) 760, 938
SchI GAGTC 2 cut(s) 65, 87
ScrFI CCNGG 3 cut(s) 171, 293, 997
SduI GDGCHC 8 cut(s) 9, 244, 505, 618, 716, 753, 829, 1101
SfaNI GCATC 1 cut(s) 91
SfcI CTRYAG 2 cut(s) 456, 755
SinI GGWCC 2 cut(s) 760, 938
SmlI CTYRAG 2 cut(s) 632, 640
SmoI CTYRAG 2 cut(s) 632, 640
SphI GCATGC 1 cut(s) 690
SspI AATATT 1 cut(s) 1124
SspMI CTAG 2 cut(s) 525, 830
SstI GAGCTC 1 cut(s) 829
StyD4I CCNGG 3 cut(s) 169, 291, 995
StyI CCWWGG 3 cut(s) 122, 304, 708
TaaI ACNGT 2 cut(s) 235, 748
TaiI ACGT 1 cut(s) 241
TaqI TCGA 3 cut(s) 252, 262, 339
TaqII GACCGA 1 cut(s) 926
TfiI GAWTC 3 cut(s) 30, 310, 1036
Tru1I TTAA 4 cut(s) 87, 219, 881, 1014
Tru9I TTAA 4 cut(s) 87, 219, 881, 1014
TscAI CASTG 2 cut(s) 753, 803
TseI GCWGC 2 cut(s) 458, 645
TspDTI ATGAA 5 cut(s) 121, 153, 347, 804, 889
TspGWI ACGGA 2 cut(s) 809, 940
TspRI CASTG 2 cut(s) 753, 803
Van91I CCANNNNNTGG 2 cut(s) 325, 821
VpaK11BI GGWCC 2 cut(s) 760, 938
XapI RAATTY 2 cut(s) 945, 988
XceI RCATGY 3 cut(s) 269, 690, 853
XmnI GAANNNNTTC 1 cut(s) 258
XspI CTAG 2 cut(s) 525, 830
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.