RchiOBHm_Chr4g0429131

Belongs to the iron ascorbate-dependent oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0000054
Physical Location & Seq
Reverse (-)
53977289 .. 53979614
2326 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ39797

Sequence Viewer

Length: 1062 bp
ATGTTGGCCGGGAATTCAAGCGACCAAGAAGACCTTCTTCTCAAACAGGTGAAGGCCTTTTACGAATCGAAAGCTGGTGTGAAAGGGCTCGTCGATGCAGGAATCACGAAAATCCCACAAATTTTCATCCATCCGCCAATAGATCCCGGCCAAGTAACCCAAACCGAGTTCAGTATTCCAGTGGTGGACCTCGCTGACGCTGCGGTTGGCATGAGCAGGCATGCGGAGGTGGCTGAGGGAGTCCGGCGGGCTGCGGAGACTGTAGTGGGGTTGTTCCTGGTGGTGAACCATGGGATACCTAAGAGAGTATTGGAGGAGATGCTGCAGGCGATCCGTGGGTTTCATGAGCTGCCCAAGGAAGTGAAGGCTCACTACTATAGTATAGACCCCAAGAGGAAGGTCAAGTCTGCTGGTAGCCATAAGCTCGGTAAACCAACTTCTCTACCATGGAGGGACTCTTTGTTATGTGACATGATTTCTGAGCCTCTTGATCCTCAAGAATTGCCTGAGATTTGCAGAGACATAACTATGGAGTACTTAAAACGTGTTCACAAATTAGGTGTCACTTTATTTGAATTGCTATCTGAGGGACTGGGGCTCAAACCTGACCACCTTCTGGGCTTGGGCTGTGCAAATGGACATTTGATTGCTGGTCATTACTCTCCACCATGCCCTGAGCCTGAATTGACCATCAACAATGGTCAACACACAGATCTCGGTTTTCTCAGCATCGTACTTCAAGACAGTATCAATGCACTCCAGCTTTTGTATCAAAACCAGTGGATTGATGTCCCTACCGTGCCCGGAGCTCTCGTGGTGAATATTGGAGATTTCTTGCAGCTACTCTCAAACAATAAATACATAAGTGTCATGCATAGAGTACTTGCCAAGAAGGAAGGTCCAAGAGTTTCTGTGGGATGTTTTTTCAATCACATTCCACAAGAAAATTCTGCAGGGAGACTCTTGGAGCCGATTAAGGAGTTGATATCAGAAAAAAATCCCCCAATATACCGTGGAACAAGTGCGATAGATTATATAGGCCCCACTACAGGAAAGCGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2OG-FeII_Oxy DIOX_N

Protein Analysis

353

Amino Acids

38.81

Weight (kDa)

6.36

Isoelectric Point (pI)

40.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 59 - 158 2.2e-15 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 215 - 310 1.1e-26 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000054)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03400 AT1G03400 AT1G03410 AT1G03410 AT1G04350 AT1G06620 AT1G06620 AT1G06640 AT1G06640 AT1G06640 AT1G06645 AT1G06650 AT1G06650 AT2G25450 AT2G30830 AT2G30840 AT2G30840 AT2G30840 AT3G61400 AT3G61400 AT5G43440 AT5G43440 AT5G43450 AT5G43450 AT5G59530 AT5G59540 AT5G59540
fragaria_vesca FvH4_2g03190 FvH4_2g03220 FvH4_3g07861 FvH4_3g31880 FvH4_3g31880 FvH4_3g31880 FvH4_4g03241 FvH4_4g03250 FvH4_4g03251 FvH4_4g03260 FvH4_4g03300 FvH4_4g03301 FvH4_4g03301 FvH4_4g03301 FvH4_4g03302 FvH4_4g03303 FvH4_4g03303 FvH4_4g03304 FvH4_4g03305 FvH4_4g03323 FvH4_4g03323 FvH4_5g19290 FvH4_5g19290 FvH4_5g19290 FvH4_5g19291 FvH4_5g19291 FvH4_5g19310 FvH4_5g19310 FvH4_5g19310 FvH4_5g19320 FvH4_5g19321 FvH4_5g19321 FvH4_5g19321 FvH4_7g31470
malus_domestica MD00G1220300.v1.1 MD02G1050800.v1.1 MD02G1053200.v1.1 MD02G1053300.v1.1 MD02G1054900.v1.1 MD03G1032300.v1.1 MD03G1245000.v1.1 MD03G1245300.v1.1 MD05G1014200.v1.1 MD13G1210900.v1.1 MD13G1211000.v1.1 MD13G1211100.v1.1 MD13G1211200.v1.1 MD13G1211800.v1.1 MD13G1211900.v1.1 MD13G1212000.v1.1 MD16G1214100.v1.1 MD16G1214300.v1.1 MD16G1214400.v1.1 MD16G1214600.v1.1 MD16G1215000.v1.1 MD16G1215200.v1.1 MD16G1215300.v1.1 MD16G1215500.v1.1 MD16G1271000.v1.1
prunus_persica Prupe.1G035500_v2.0.a1 Prupe.1G035700_v2.0.a1 Prupe.1G035800_v2.0.a1 Prupe.1G035900_v2.0.a1 Prupe.1G036000_v2.0.a1 Prupe.1G036100_v2.0.a1 Prupe.1G036200_v2.0.a1 Prupe.1G036400_v2.0.a1 Prupe.1G036500_v2.0.a1 Prupe.1G036600_v2.0.a1 Prupe.1G036700_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G191000_v2.0.a1 Prupe.1G191100_v2.0.a1
pyrus_communis pycom13g18340 pycom13g18350 pycom13g18380 pycom16g17990 pycom16g18010 pycom16g18020
rosa_chinensis RchiOBHm_Chr2g0124051 RchiOBHm_Chr4g0391811 RchiOBHm_Chr4g0391931 RchiOBHm_Chr4g0391961 RchiOBHm_Chr4g0391971 RchiOBHm_Chr4g0391981 RchiOBHm_Chr4g0391991 RchiOBHm_Chr4g0392031 RchiOBHm_Chr4g0392051 RchiOBHm_Chr4g0392061 RchiOBHm_Chr4g0392071 RchiOBHm_Chr4g0392081 RchiOBHm_Chr4g0392091 RchiOBHm_Chr4g0392111 RchiOBHm_Chr4g0392121 RchiOBHm_Chr4g0392131 RchiOBHm_Chr4g0392141 RchiOBHm_Chr4g0392151 RchiOBHm_Chr4g0392211 RchiOBHm_Chr4g0392251 RchiOBHm_Chr4g0392261 RchiOBHm_Chr4g0392301 RchiOBHm_Chr4g0392311 RchiOBHm_Chr4g0392341 RchiOBHm_Chr4g0409221 RchiOBHm_Chr4g0410991 RchiOBHm_Chr4g0429131 RchiOBHm_Chr4g0437051 RchiOBHm_Chr5g0038681 RchiOBHm_Chr5g0047071 RchiOBHm_Chr5g0058651 RchiOBHm_Chr6g0248121 RchiOBHm_Chr6g0248141 RchiOBHm_Chr6g0248291 RchiOBHm_Chr6g0248341 RchiOBHm_Chr6g0248351
rosa_laevigata RLG00000006473 RLG00000006475 RLG00000006667 RLG00000007095 RLG00000009819 RLG00000009820 RLG00000009821 RLG00000009822 RLG00000009825 RLG00000009826 RLG00000009830 RLG00000009831 RLG00000009832 RLG00000009833 RLG00000009834 RLG00000009835 RLG00000009837 RLG00000009838 RLG00000009839 RLG00000009841 RLG00000009842 RLG00000009844 RLG00000009845 RLG00000009846 RLG00000009847 RLG00000009848 RLG00000009849 RLG00000015160 RLG00000015161 RLG00000017791 RLG00000018779 RLG00000034461 RLG00000035237
rosa_multiflora Rmu_co8253791.1_g000001 Rmu_co8348827.1_g000001 Rmu_co8400489.1_g000001 Rmu_sc0000383.1_g000003 Rmu_sc0000383.1_g000005 Rmu_sc0000383.1_g000026 Rmu_sc0000846.1_g000012 Rmu_sc0001231.1_g000013 Rmu_sc0001231.1_g000026 Rmu_sc0001231.1_g000028 Rmu_sc0001800.1_g000027 Rmu_sc0003436.1_g000022 Rmu_sc0004104.1_g000004 Rmu_sc0004295.1_g000021 Rmu_sc0004295.1_g000031 Rmu_sc0004928.1_g000002 Rmu_sc0004928.1_g000008 Rmu_sc0004928.1_g000011 Rmu_sc0004928.1_g000027 Rmu_sc0004977.1_g000007 Rmu_sc0005018.1_g000002 Rmu_sc0005091.1_g000026 Rmu_sc0005091.1_g000032 Rmu_sc0005091.1_g000033 Rmu_sc0005817.1_g000003 Rmu_sc0005817.1_g000008 Rmu_sc0012482.1_g000002 Rmu_sc0014210.1_g000001 Rmu_sc0016150.1_g000001 Rmu_sc0029701.1_g000002 Rmu_sc0036585.1_g000001 Rmu_sc0037489.1_g000002
rosa_roxburghii Rroxscaffold_1G00021790 Rroxscaffold_1G00021800 Rroxscaffold_1G00034360 Rroxscaffold_2G00120130 Rroxscaffold_5G00337210 Rroxscaffold_5G00337220 Rroxscaffold_5G00337230 Rroxscaffold_5G00337250 Rroxscaffold_5G00337260 Rroxscaffold_5G00337270 Rroxscaffold_5G00337300 Rroxscaffold_5G00337310 Rroxscaffold_5G00337320 Rroxscaffold_5G00337330 Rroxscaffold_5G00337350 Rroxscaffold_5G00337370 Rroxscaffold_5G00337390 Rroxscaffold_5G00337400 Rroxscaffold_5G00337420 Rroxscaffold_5G00337430 Rroxscaffold_5G00337450 Rroxscaffold_5G00337470 Rroxscaffold_5G00337480 Rroxscaffold_5G00337520 Rroxscaffold_5G00378130 Rroxscaffold_6G00397800 Rroxscaffold_7G00213320 Rroxscaffold_7G00213390 Rroxscaffold_7G00213420 Rroxscaffold_7G00213470
rosa_rugosa Rorug02G0070100 Rorug02G0070100 Rorug02G0070100 Rorug02G0128600 Rorug02G0128700 Rorug02G0128800 Rorug02G0128900 Rorug02G0248400 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337100 Rorug03G0337200 Rorug03G0337300 Rorug03G0337600 Rorug03G0337700 Rorug03G0337800 Rorug03G0337900 Rorug03G0337900 Rorug03G0338000 Rorug03G0338100 Rorug03G0338200 Rorug04G0233200.1 Rorug04G0297900 Rorug05G0233700 Rorug05G0316700 Rorug05G0530800 Rorug05G0530900
rosa_samantha Rh2AG307400 Rh2BG316500 Rh2DG331200 Rh4AG039300 Rh4AG039400 Rh4AG039600 Rh4AG039700 Rh4AG039900 Rh4AG040000 Rh4AG040100 Rh4AG040300 Rh4AG040500 Rh4AG040700 Rh4AG041000 Rh4AG041100 Rh4AG041600 Rh4AG041800 Rh4AG041900 Rh4AG352400 Rh4BG033200 Rh4BG034100 Rh4BG034300 Rh4BG034700 Rh4BG034800 Rh4BG035200 Rh4BG035400 Rh4BG036000 Rh4BG036200 Rh4BG036300 Rh4BG036500 Rh4BG036800 Rh4BG361700 Rh4CG042000 Rh4CG042200 Rh4CG042300 Rh4CG042500 Rh4CG042600 Rh4CG042800 Rh4CG043200 Rh4CG043400 Rh4CG043500 Rh4CG043700 Rh4CG043800 Rh4CG044200 Rh4CG044500 Rh4CG044700 Rh4CG177000 Rh4CG310600 Rh4CG376000 Rh4DG036300 Rh4DG036900 Rh4DG037000 Rh4DG037100 Rh4DG037200 Rh4DG037300 Rh4DG037500 Rh4DG037700 Rh4DG037800 Rh4DG037900 Rh4DG038000 Rh4DG038200 Rh4DG038500 Rh4DG038700 Rh4DG038900 Rh4DG159600 Rh5CG347900 Rh5DG409900 Rh6AG045300 Rh6AG045800 Rh6AG046000 Rh6AG046100 Rh6BG040600 Rh6BG040700 Rh6BG042200 Rh6BG042700 Rh6BG042800 Rh6DG035900 Rh6DG036100 Rh6DG036200
rosa_wichuraiana Rw0G010420 Rw2G024780 Rw4G003020 Rw4G003070 Rw4G003080 Rw4G003090 Rw4G003100 Rw4G003130 Rw4G003140 Rw4G003150 Rw4G003180 Rw4G003190 Rw4G003200 Rw4G003210 Rw4G003220 Rw4G003240 Rw4G003270 Rw4G025050 Rw4G030850 Rw6G003930 Rw6G004000 Rw6G004030 Rw6G004040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 616
AciI CCGC 5 cut(s) 134, 203, 224, 247, 254
AclWI GGATC 3 cut(s) 137, 325, 485
AcoI YGGCCR 2 cut(s) 6, 148
AcsI RAATTY 3 cut(s) 13, 120, 946
AfaI GTAC 3 cut(s) 536, 735, 882
AfiI CCNNNNNNNGG 2 cut(s) 616, 1049
AflIII ACRYGT 1 cut(s) 544
AgsI TTSAA 4 cut(s) 18, 575, 740, 928
AjnI CCWGG 1 cut(s) 276
AjuI GAANNNNNNNTTGG 2 cut(s) 18, 50
AluBI AGCT 6 cut(s) 74, 349, 424, 763, 809, 841
AluI AGCT 6 cut(s) 74, 349, 424, 763, 809, 841
Alw21I GWGCWC 1 cut(s) 811
Alw26I GTCTC 3 cut(s) 251, 513, 952
AlwI GGATC 3 cut(s) 137, 325, 485
AoxI GGCC 4 cut(s) 6, 54, 148, 1039
ApeKI GCWGC 5 cut(s) 200, 251, 322, 349, 838
ApoI RAATTY 3 cut(s) 13, 120, 946
ArsI GACNNNNNNTTYG 2 cut(s) 546, 578
Asp700I GAANNNNTTC 1 cut(s) 33
AspS9I GGNCC 3 cut(s) 187, 899, 1040
AsuC2I CCSGG 3 cut(s) 10, 147, 804
AsuHPI GGTGA 3 cut(s) 61, 295, 829
AvaII GGWCC 2 cut(s) 187, 899
BaeGI GKGCMC 1 cut(s) 804
BanII GRGCYC 3 cut(s) 90, 600, 811
BarI GAAGNNNNNNTAC 6 cut(s) 44, 76, 356, 388, 421, 453
BauI CACGAG 1 cut(s) 812
BbsI GAAGAC 1 cut(s) 36
Bbv12I GWGCWC 1 cut(s) 811
BbvCI CCTCAGC 1 cut(s) 234
BbvI GCAGC 5 cut(s) 187, 238, 309, 336, 850
BccI CCATC 2 cut(s) 138, 698
BciT130I CCWGG 1 cut(s) 278
BciVI GTATCC 1 cut(s) 288
BcnI CCSGG 3 cut(s) 10, 147, 804
BcoDI GTCTC 3 cut(s) 251, 513, 952
BfmI CTRYAG 5 cut(s) 261, 323, 376, 951, 1047
BfuI GTATCC 1 cut(s) 288
BglII AGATCT 1 cut(s) 712
BisI GCNGC 5 cut(s) 201, 252, 323, 350, 839
BlsI GCNGC 5 cut(s) 202, 253, 324, 351, 840
BmcAI AGTACT 2 cut(s) 536, 882
Bme1390I CCNGG 4 cut(s) 10, 147, 278, 804
Bme18I GGWCC 2 cut(s) 187, 899
BmgT120I GGNCC 3 cut(s) 187, 899, 1040
BmiI GGNNCC 2 cut(s) 969, 1042
BmrFI CCNGG 4 cut(s) 10, 147, 278, 804
BmrI ACTGGG 1 cut(s) 602
BmsI GCATC 3 cut(s) 85, 309, 738
BmuI ACTGGG 1 cut(s) 602
BpiI GAAGAC 1 cut(s) 36
BpmI CTGGAG 1 cut(s) 743
Bpu10I CCTNAGC 2 cut(s) 234, 675
BpuEI CTTGAG 1 cut(s) 480
BpuMI CCSGG 3 cut(s) 10, 147, 804
BsaJI CCNNGG 5 cut(s) 289, 334, 354, 446, 1012
BsaXI ACNNNNNCTCC 2 cut(s) 798, 828
Bsc4I CCNNNNNNNGG 2 cut(s) 616, 1049
Bse1I ACTGG 3 cut(s) 179, 597, 778
BseBI CCWGG 1 cut(s) 278
BseDI CCNNGG 5 cut(s) 289, 334, 354, 446, 1012
BseGI GGATG 3 cut(s) 126, 130, 923
BseLI CCNNNNNNNGG 2 cut(s) 616, 1049
BseMII CTCAG 6 cut(s) 225, 471, 498, 576, 666, 739
BseNI ACTGG 3 cut(s) 179, 597, 778
BseRI GAGGAG 1 cut(s) 329
BseSI GKGCMC 1 cut(s) 804
BseXI GCAGC 5 cut(s) 187, 238, 309, 336, 850
BshFI GGCC 4 cut(s) 8, 56, 150, 1041
BsiHKAI GWGCWC 1 cut(s) 811
BsiSI CCGG 4 cut(s) 9, 147, 244, 804
BslFI GGGAC 3 cut(s) 467, 603, 776
BslI CCNNNNNNNGG 2 cut(s) 616, 1049
BsmAI GTCTC 3 cut(s) 251, 513, 952
BsmFI GGGAC 3 cut(s) 467, 603, 776
BsnI GGCC 4 cut(s) 8, 56, 150, 1041
Bsp1286I GDGCHC 4 cut(s) 90, 600, 804, 811
Bsp143I GATC 4 cut(s) 142, 330, 490, 712
Bsp19I CCATGG 2 cut(s) 289, 446
BspACI CCGC 5 cut(s) 134, 203, 224, 247, 254
BspANI GGCC 4 cut(s) 8, 56, 150, 1041
BspCNI CTCAG 6 cut(s) 226, 472, 499, 577, 667, 738
BspHI TCATGA 1 cut(s) 343
BspLI GGNNCC 2 cut(s) 969, 1042
BspMAI CTGCAG 2 cut(s) 327, 955
BspPI GGATC 3 cut(s) 137, 325, 485
BsrI ACTGG 3 cut(s) 179, 597, 778
BssECI CCNNGG 5 cut(s) 289, 334, 354, 446, 1012
BssMI GATC 4 cut(s) 142, 330, 490, 712
BssSI CACGAG 1 cut(s) 812
BssT1I CCWWGG 3 cut(s) 289, 354, 446
Bst2BI CACGAG 1 cut(s) 812
Bst2UI CCWGG 1 cut(s) 278
Bst4CI ACNGT 4 cut(s) 262, 746, 799, 1013
BstC8I GCNNGC 4 cut(s) 218, 222, 249, 327
BstDEI CTNAG 7 cut(s) 234, 300, 480, 507, 585, 675, 725
BstDSI CCRYGG 4 cut(s) 289, 334, 446, 1012
BstF5I GGATG 3 cut(s) 126, 130, 923
BstKTI GATC 4 cut(s) 145, 333, 493, 715
BstMAI GTCTC 3 cut(s) 251, 513, 952
BstMBI GATC 4 cut(s) 142, 330, 490, 712
BstMWI GCNNNNNNNGC 2 cut(s) 200, 230
BstNI CCWGG 1 cut(s) 278
BstNSI RCATGY 1 cut(s) 224
BstSCI CCNGG 4 cut(s) 8, 145, 276, 802
BstSFI CTRYAG 5 cut(s) 261, 323, 376, 951, 1047
BstSLI GKGCMC 1 cut(s) 804
BstV1I GCAGC 5 cut(s) 187, 238, 309, 336, 850
BstV2I GAAGAC 1 cut(s) 36
BstX2I RGATCY 2 cut(s) 142, 712
BstYI RGATCY 2 cut(s) 142, 712
BsuI GTATCC 1 cut(s) 288
BsuRI GGCC 4 cut(s) 8, 56, 150, 1041
BtgI CCRYGG 4 cut(s) 289, 334, 446, 1012
BtsCI GGATG 3 cut(s) 126, 130, 923
BtsIMutI CAGTG 2 cut(s) 186, 785
Cac8I GCNNGC 4 cut(s) 218, 222, 249, 327
CciI TCATGA 1 cut(s) 343
Cfr13I GGNCC 3 cut(s) 187, 899, 1040
CseI GACGC 1 cut(s) 206
Csp6I GTAC 3 cut(s) 535, 734, 881
CspCI CAANNNNNGTGG 2 cut(s) 761, 796
CviAII CATG 8 cut(s) 211, 221, 290, 344, 447, 472, 669, 871
CviQI GTAC 3 cut(s) 535, 734, 881
DdeI CTNAG 7 cut(s) 234, 300, 480, 507, 585, 675, 725
DpnI GATC 4 cut(s) 144, 332, 492, 714
DpnII GATC 4 cut(s) 142, 330, 490, 712
EaeI YGGCCR 2 cut(s) 6, 148
EciI GGCGGA 1 cut(s) 123
Ecl136II GAGCTC 1 cut(s) 809
Eco130I CCWWGG 3 cut(s) 289, 354, 446
Eco147I AGGCCT 1 cut(s) 56
Eco24I GRGCYC 3 cut(s) 90, 600, 811
Eco32I GATATC 1 cut(s) 987
Eco47I GGWCC 2 cut(s) 187, 899
Eco53kI GAGCTC 1 cut(s) 809
EcoICRI GAGCTC 1 cut(s) 809
EcoO109I RGGNCCY 1 cut(s) 1040
EcoRI GAATTC 1 cut(s) 13
EcoRII CCWGG 1 cut(s) 276
EcoRV GATATC 1 cut(s) 987
EcoT14I CCWWGG 3 cut(s) 289, 354, 446
EcoT22I ATGCAT 1 cut(s) 876
EcoT38I GRGCYC 3 cut(s) 90, 600, 811
ErhI CCWWGG 3 cut(s) 289, 354, 446
FaeI CATG 8 cut(s) 214, 224, 293, 347, 450, 475, 672, 874
FalI AAGNNNNNCTT 4 cut(s) 18, 50, 21, 53
FaqI GGGAC 3 cut(s) 467, 603, 776
FatI CATG 8 cut(s) 210, 220, 289, 343, 446, 471, 668, 870
FauI CCCGC 1 cut(s) 240
Fnu4HI GCNGC 5 cut(s) 201, 252, 323, 350, 839
FokI GGATG 3 cut(s) 113, 117, 930
FriOI GRGCYC 3 cut(s) 90, 600, 811
Fsp4HI GCNGC 5 cut(s) 201, 252, 323, 350, 839
GluI GCNGC 5 cut(s) 201, 252, 323, 350, 839
GsuI CTGGAG 1 cut(s) 743
HaeIII GGCC 4 cut(s) 8, 56, 150, 1041
HapII CCGG 4 cut(s) 9, 147, 244, 804
HgaI GACGC 1 cut(s) 206
Hin1II CATG 8 cut(s) 214, 224, 293, 347, 450, 475, 672, 874
HincII GTYRAC 1 cut(s) 704
HindII GTYRAC 1 cut(s) 704
HinfI GANTC 5 cut(s) 65, 102, 240, 455, 960
HpaII CCGG 4 cut(s) 9, 147, 244, 804
HphI GGTGA 3 cut(s) 61, 295, 829
Hpy166II GTNNAC 5 cut(s) 187, 286, 431, 550, 704
Hpy188I TCNGA 3 cut(s) 481, 586, 991
Hpy188III TCNNGA 5 cut(s) 106, 344, 488, 497, 740
Hpy8I GTNNAC 5 cut(s) 187, 286, 431, 550, 704
Hpy99I CGWCG 1 cut(s) 95
HpyAV CCTTC 7 cut(s) 44, 46, 358, 391, 623, 886, 890
HpyCH4III ACNGT 4 cut(s) 262, 746, 799, 1013
HpyCH4IV ACGT 1 cut(s) 544
HpyCH4V TGCA 8 cut(s) 98, 325, 516, 632, 755, 838, 874, 953
HpyF10VI GCNNNNNNNGC 2 cut(s) 200, 230
HpyF3I CTNAG 7 cut(s) 234, 300, 480, 507, 585, 675, 725
HpySE526I ACGT 1 cut(s) 544
Hsp92II CATG 8 cut(s) 214, 224, 293, 347, 450, 475, 672, 874
Kzo9I GATC 4 cut(s) 142, 330, 490, 712
LmnI GCTCC 2 cut(s) 806, 967
Lsp1109I GCAGC 5 cut(s) 187, 238, 309, 336, 850
LweI GCATC 3 cut(s) 85, 309, 738
MaeII ACGT 1 cut(s) 544
MaeIII GTNAC 3 cut(s) 154, 467, 562
MalI GATC 4 cut(s) 144, 332, 492, 714
MboI GATC 4 cut(s) 142, 330, 490, 712
MboII GAAGA 2 cut(s) 29, 41
MflI RGATCY 2 cut(s) 142, 712
MhlI GDGCHC 4 cut(s) 90, 600, 804, 811
MluCI AATT 7 cut(s) 13, 120, 500, 554, 575, 683, 946
MlyI GAGTC 3 cut(s) 249, 449, 954
MnlI CCTC 9 cut(s) 200, 220, 229, 307, 387, 444, 495, 504, 580
Mph1103I ATGCAT 1 cut(s) 876
MroXI GAANNNNTTC 1 cut(s) 33
MseI TTAA 2 cut(s) 539, 975
MslI CAYNNNNRTG 1 cut(s) 527
MspI CCGG 4 cut(s) 9, 147, 244, 804
MspR9I CCNGG 4 cut(s) 10, 147, 278, 804
MvaI CCWGG 1 cut(s) 278
MwoI GCNNNNNNNGC 2 cut(s) 200, 230
NciI CCSGG 3 cut(s) 10, 147, 804
NcoI CCATGG 2 cut(s) 289, 446
NdeII GATC 4 cut(s) 142, 330, 490, 712
NlaIII CATG 8 cut(s) 214, 224, 293, 347, 450, 475, 672, 874
NlaIV GGNNCC 2 cut(s) 969, 1042
NmuCI GTSAC 2 cut(s) 467, 562
NsiI ATGCAT 1 cut(s) 876
NspI RCATGY 1 cut(s) 224
PaeI GCATGC 1 cut(s) 224
PagI TCATGA 1 cut(s) 343
PceI AGGCCT 1 cut(s) 56
PdmI GAANNNNTTC 1 cut(s) 33
PfeI GAWTC 2 cut(s) 65, 102
PflMI CCANNNNNTGG 1 cut(s) 616
PkrI GCNGC 5 cut(s) 202, 253, 324, 351, 840
PleI GAGTC 3 cut(s) 248, 449, 954
PpsI GAGTC 3 cut(s) 248, 449, 954
Psp124BI GAGCTC 1 cut(s) 811
Psp6I CCWGG 1 cut(s) 276
PspGI CCWGG 1 cut(s) 276
PspN4I GGNNCC 2 cut(s) 969, 1042
PspPI GGNCC 3 cut(s) 187, 899, 1040
PstI CTGCAG 2 cut(s) 327, 955
PsuI RGATCY 2 cut(s) 142, 712
RsaI GTAC 3 cut(s) 536, 735, 882
RsaNI GTAC 3 cut(s) 535, 734, 881
RseI CAYNNNNRTG 1 cut(s) 527
SacI GAGCTC 1 cut(s) 811
SaqAI TTAA 2 cut(s) 539, 975
SatI GCNGC 5 cut(s) 201, 252, 323, 350, 839
Sau3AI GATC 4 cut(s) 142, 330, 490, 712
Sau96I GGNCC 3 cut(s) 187, 899, 1040
ScaI AGTACT 2 cut(s) 536, 882
SchI GAGTC 3 cut(s) 249, 449, 954
ScrFI CCNGG 4 cut(s) 10, 147, 278, 804
SduI GDGCHC 4 cut(s) 90, 600, 804, 811
SfaNI GCATC 3 cut(s) 85, 309, 738
SfcI CTRYAG 5 cut(s) 261, 323, 376, 951, 1047
SinI GGWCC 2 cut(s) 187, 899
SmiMI CAYNNNNRTG 1 cut(s) 527
SmlI CTYRAG 1 cut(s) 495
SmoI CTYRAG 1 cut(s) 495
SphI GCATGC 1 cut(s) 224
Sse9I AATT 7 cut(s) 13, 120, 500, 554, 575, 683, 946
SseBI AGGCCT 1 cut(s) 56
SsiI CCGC 5 cut(s) 134, 203, 224, 247, 254
SspI AATATT 1 cut(s) 823
SstI GAGCTC 1 cut(s) 811
StuI AGGCCT 1 cut(s) 56
StyD4I CCNGG 4 cut(s) 8, 145, 276, 802
StyI CCWWGG 3 cut(s) 289, 354, 446
TaaI ACNGT 4 cut(s) 262, 746, 799, 1013
TaiI ACGT 1 cut(s) 547
TaqI TCGA 2 cut(s) 68, 93
TasI AATT 7 cut(s) 13, 120, 500, 554, 575, 683, 946
TatI WGTACW 2 cut(s) 534, 880
TfiI GAWTC 2 cut(s) 65, 102
Tru1I TTAA 2 cut(s) 539, 975
Tru9I TTAA 2 cut(s) 539, 975
TscAI CASTG 2 cut(s) 186, 785
TseFI GTSAC 2 cut(s) 467, 562
TseI GCWGC 5 cut(s) 200, 251, 322, 349, 838
Tsp45I GTSAC 2 cut(s) 467, 562
TspDTI ATGAA 2 cut(s) 115, 332
TspGWI ACGGA 1 cut(s) 323
TspRI CASTG 2 cut(s) 186, 785
Van91I CCANNNNNTGG 1 cut(s) 616
VpaK11BI GGWCC 2 cut(s) 187, 899
XapI RAATTY 3 cut(s) 13, 120, 946
XceI RCATGY 1 cut(s) 224
XmnI GAANNNNTTC 1 cut(s) 33
ZrmI AGTACT 2 cut(s) 536, 882
Zsp2I ATGCAT 1 cut(s) 876
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.