pycom16g17990

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
Physical Location & Seq
Forward (+)
14365432 .. 14366013
582 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom16g17990.1

Sequence Viewer

Length: 582 bp
ATGGTAGCGACCAACACAAATTACGACCGAAAAAGTGAAGTAAAAGCTTTTGATGACACAAAAGAAGGAGTTAAAGGCCTCGTTGATGCGGGCATAACGGAAGTTCCTCGAATTTTTCATCACCCGCTAGAGGAGTCGGAAACCAGCTCCGATTCAGAAGCCAGCCAGTTCAGCATTCCGGTCATAGACCTTCAAGGCCTTGAACTCGGTAGTCTAACTAAGCGCAAGGAGATTGTTGCAAAAGTCGCAGAGGTATCGGAGACTTGGGGCTTTTTTCAGATTGCAAATCATGGAATACCTGTAGATGTTTTGGAGGAGATGAAAAATGGGGCACGTGGGTTTTTTGAGCAAGACACTCAAGTGAAGAAGGAGCTTTATACTCGTGACCACTCCAGACCTTTGGTCTACAATAGCAATTTTGATCTGTATAGTGCACCGGCGACTAGTTGGAGGGATAGTTTTGGGTGTTACATGGCTCCTAATCCTCCTAAGCCGGAAGAATTGCCAGAAGTATGCAGGTATATATGCGACATGCATGATAATTTATATTTCTTTGCTACAATGGTAACTAGTTTGATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

194

Amino Acids

21.82

Weight (kDa)

4.82

Isoelectric Point (pI)

35.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 59 - 165 2e-19 non-haem dioxygenase in morphine synthesis N-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000054)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03400 AT1G03400 AT1G03410 AT1G03410 AT1G04350 AT1G06620 AT1G06620 AT1G06640 AT1G06640 AT1G06640 AT1G06645 AT1G06650 AT1G06650 AT2G25450 AT2G30830 AT2G30840 AT2G30840 AT2G30840 AT3G61400 AT3G61400 AT5G43440 AT5G43440 AT5G43450 AT5G43450 AT5G59530 AT5G59540 AT5G59540
fragaria_vesca FvH4_2g03190 FvH4_2g03220 FvH4_3g07861 FvH4_3g31880 FvH4_3g31880 FvH4_3g31880 FvH4_4g03241 FvH4_4g03250 FvH4_4g03251 FvH4_4g03260 FvH4_4g03300 FvH4_4g03301 FvH4_4g03301 FvH4_4g03301 FvH4_4g03302 FvH4_4g03303 FvH4_4g03303 FvH4_4g03304 FvH4_4g03305 FvH4_4g03323 FvH4_4g03323 FvH4_5g19290 FvH4_5g19290 FvH4_5g19290 FvH4_5g19291 FvH4_5g19291 FvH4_5g19310 FvH4_5g19310 FvH4_5g19310 FvH4_5g19320 FvH4_5g19321 FvH4_5g19321 FvH4_5g19321 FvH4_7g31470
malus_domestica MD00G1220300.v1.1 MD02G1050800.v1.1 MD02G1053200.v1.1 MD02G1053300.v1.1 MD02G1054900.v1.1 MD03G1032300.v1.1 MD03G1245000.v1.1 MD03G1245300.v1.1 MD05G1014200.v1.1 MD13G1210900.v1.1 MD13G1211000.v1.1 MD13G1211100.v1.1 MD13G1211200.v1.1 MD13G1211800.v1.1 MD13G1211900.v1.1 MD13G1212000.v1.1 MD16G1214100.v1.1 MD16G1214300.v1.1 MD16G1214400.v1.1 MD16G1214600.v1.1 MD16G1215000.v1.1 MD16G1215200.v1.1 MD16G1215300.v1.1 MD16G1215500.v1.1 MD16G1271000.v1.1
prunus_persica Prupe.1G035500_v2.0.a1 Prupe.1G035700_v2.0.a1 Prupe.1G035800_v2.0.a1 Prupe.1G035900_v2.0.a1 Prupe.1G036000_v2.0.a1 Prupe.1G036100_v2.0.a1 Prupe.1G036200_v2.0.a1 Prupe.1G036400_v2.0.a1 Prupe.1G036500_v2.0.a1 Prupe.1G036600_v2.0.a1 Prupe.1G036700_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036800_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G036900_v2.0.a1 Prupe.1G191000_v2.0.a1 Prupe.1G191100_v2.0.a1
pyrus_communis pycom13g18340 pycom13g18350 pycom13g18380 pycom16g17990 pycom16g18010 pycom16g18020
rosa_chinensis RchiOBHm_Chr2g0124051 RchiOBHm_Chr4g0391811 RchiOBHm_Chr4g0391931 RchiOBHm_Chr4g0391961 RchiOBHm_Chr4g0391971 RchiOBHm_Chr4g0391981 RchiOBHm_Chr4g0391991 RchiOBHm_Chr4g0392031 RchiOBHm_Chr4g0392051 RchiOBHm_Chr4g0392061 RchiOBHm_Chr4g0392071 RchiOBHm_Chr4g0392081 RchiOBHm_Chr4g0392091 RchiOBHm_Chr4g0392111 RchiOBHm_Chr4g0392121 RchiOBHm_Chr4g0392131 RchiOBHm_Chr4g0392141 RchiOBHm_Chr4g0392151 RchiOBHm_Chr4g0392211 RchiOBHm_Chr4g0392251 RchiOBHm_Chr4g0392261 RchiOBHm_Chr4g0392301 RchiOBHm_Chr4g0392311 RchiOBHm_Chr4g0392341 RchiOBHm_Chr4g0409221 RchiOBHm_Chr4g0410991 RchiOBHm_Chr4g0429131 RchiOBHm_Chr4g0437051 RchiOBHm_Chr5g0038681 RchiOBHm_Chr5g0047071 RchiOBHm_Chr5g0058651 RchiOBHm_Chr6g0248121 RchiOBHm_Chr6g0248141 RchiOBHm_Chr6g0248291 RchiOBHm_Chr6g0248341 RchiOBHm_Chr6g0248351
rosa_laevigata RLG00000006473 RLG00000006475 RLG00000006667 RLG00000007095 RLG00000009819 RLG00000009820 RLG00000009821 RLG00000009822 RLG00000009825 RLG00000009826 RLG00000009830 RLG00000009831 RLG00000009832 RLG00000009833 RLG00000009834 RLG00000009835 RLG00000009837 RLG00000009838 RLG00000009839 RLG00000009841 RLG00000009842 RLG00000009844 RLG00000009845 RLG00000009846 RLG00000009847 RLG00000009848 RLG00000009849 RLG00000015160 RLG00000015161 RLG00000017791 RLG00000018779 RLG00000034461 RLG00000035237
rosa_multiflora Rmu_co8253791.1_g000001 Rmu_co8348827.1_g000001 Rmu_co8400489.1_g000001 Rmu_sc0000383.1_g000003 Rmu_sc0000383.1_g000005 Rmu_sc0000383.1_g000026 Rmu_sc0000846.1_g000012 Rmu_sc0001231.1_g000013 Rmu_sc0001231.1_g000026 Rmu_sc0001231.1_g000028 Rmu_sc0001800.1_g000027 Rmu_sc0003436.1_g000022 Rmu_sc0004104.1_g000004 Rmu_sc0004295.1_g000021 Rmu_sc0004295.1_g000031 Rmu_sc0004928.1_g000002 Rmu_sc0004928.1_g000008 Rmu_sc0004928.1_g000011 Rmu_sc0004928.1_g000027 Rmu_sc0004977.1_g000007 Rmu_sc0005018.1_g000002 Rmu_sc0005091.1_g000026 Rmu_sc0005091.1_g000032 Rmu_sc0005091.1_g000033 Rmu_sc0005817.1_g000003 Rmu_sc0005817.1_g000008 Rmu_sc0012482.1_g000002 Rmu_sc0014210.1_g000001 Rmu_sc0016150.1_g000001 Rmu_sc0029701.1_g000002 Rmu_sc0036585.1_g000001 Rmu_sc0037489.1_g000002
rosa_roxburghii Rroxscaffold_1G00021790 Rroxscaffold_1G00021800 Rroxscaffold_1G00034360 Rroxscaffold_2G00120130 Rroxscaffold_5G00337210 Rroxscaffold_5G00337220 Rroxscaffold_5G00337230 Rroxscaffold_5G00337250 Rroxscaffold_5G00337260 Rroxscaffold_5G00337270 Rroxscaffold_5G00337300 Rroxscaffold_5G00337310 Rroxscaffold_5G00337320 Rroxscaffold_5G00337330 Rroxscaffold_5G00337350 Rroxscaffold_5G00337370 Rroxscaffold_5G00337390 Rroxscaffold_5G00337400 Rroxscaffold_5G00337420 Rroxscaffold_5G00337430 Rroxscaffold_5G00337450 Rroxscaffold_5G00337470 Rroxscaffold_5G00337480 Rroxscaffold_5G00337520 Rroxscaffold_5G00378130 Rroxscaffold_6G00397800 Rroxscaffold_7G00213320 Rroxscaffold_7G00213390 Rroxscaffold_7G00213420 Rroxscaffold_7G00213470
rosa_rugosa Rorug02G0070100 Rorug02G0070100 Rorug02G0070100 Rorug02G0128600 Rorug02G0128700 Rorug02G0128800 Rorug02G0128900 Rorug02G0248400 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337000 Rorug03G0337100 Rorug03G0337200 Rorug03G0337300 Rorug03G0337600 Rorug03G0337700 Rorug03G0337800 Rorug03G0337900 Rorug03G0337900 Rorug03G0338000 Rorug03G0338100 Rorug03G0338200 Rorug04G0233200.1 Rorug04G0297900 Rorug05G0233700 Rorug05G0316700 Rorug05G0530800 Rorug05G0530900
rosa_samantha Rh2AG307400 Rh2BG316500 Rh2DG331200 Rh4AG039300 Rh4AG039400 Rh4AG039600 Rh4AG039700 Rh4AG039900 Rh4AG040000 Rh4AG040100 Rh4AG040300 Rh4AG040500 Rh4AG040700 Rh4AG041000 Rh4AG041100 Rh4AG041600 Rh4AG041800 Rh4AG041900 Rh4AG352400 Rh4BG033200 Rh4BG034100 Rh4BG034300 Rh4BG034700 Rh4BG034800 Rh4BG035200 Rh4BG035400 Rh4BG036000 Rh4BG036200 Rh4BG036300 Rh4BG036500 Rh4BG036800 Rh4BG361700 Rh4CG042000 Rh4CG042200 Rh4CG042300 Rh4CG042500 Rh4CG042600 Rh4CG042800 Rh4CG043200 Rh4CG043400 Rh4CG043500 Rh4CG043700 Rh4CG043800 Rh4CG044200 Rh4CG044500 Rh4CG044700 Rh4CG177000 Rh4CG310600 Rh4CG376000 Rh4DG036300 Rh4DG036900 Rh4DG037000 Rh4DG037100 Rh4DG037200 Rh4DG037300 Rh4DG037500 Rh4DG037700 Rh4DG037800 Rh4DG037900 Rh4DG038000 Rh4DG038200 Rh4DG038500 Rh4DG038700 Rh4DG038900 Rh4DG159600 Rh5CG347900 Rh5DG409900 Rh6AG045300 Rh6AG045800 Rh6AG046000 Rh6AG046100 Rh6BG040600 Rh6BG040700 Rh6BG042200 Rh6BG042700 Rh6BG042800 Rh6DG035900 Rh6DG036100 Rh6DG036200
rosa_wichuraiana Rw0G010420 Rw2G024780 Rw4G003020 Rw4G003070 Rw4G003080 Rw4G003090 Rw4G003100 Rw4G003130 Rw4G003140 Rw4G003150 Rw4G003180 Rw4G003190 Rw4G003200 Rw4G003210 Rw4G003220 Rw4G003240 Rw4G003270 Rw4G025050 Rw4G030850 Rw6G003930 Rw6G004000 Rw6G004030 Rw6G004040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 507
AccI GTMKAC 1 cut(s) 405
AciI CCGC 2 cut(s) 89, 125
AcsI RAATTY 1 cut(s) 111
AcvI CACGTG 1 cut(s) 335
AfiI CCNNNNNNNGG 1 cut(s) 130
AgsI TTSAA 2 cut(s) 194, 203
AhdI GACNNNNNGTC 1 cut(s) 401
AhlI ACTAGT 2 cut(s) 443, 569
AleI CACNNNNGTG 1 cut(s) 359
AluBI AGCT 3 cut(s) 47, 147, 373
AluI AGCT 3 cut(s) 47, 147, 373
Alw21I GWGCWC 1 cut(s) 436
Alw26I GTCTC 1 cut(s) 254
Alw44I GTGCAC 1 cut(s) 432
AoxI GGCC 2 cut(s) 76, 196
ApaLI GTGCAC 1 cut(s) 432
ApoI RAATTY 1 cut(s) 111
AspLEI GCGC 1 cut(s) 225
AsuHPI GGTGA 1 cut(s) 113
BaeGI GKGCMC 2 cut(s) 334, 436
BauI CACGAG 1 cut(s) 381
BbrPI CACGTG 1 cut(s) 335
Bbv12I GWGCWC 1 cut(s) 436
BcgI CGANNNNNNTGC 2 cut(s) 237, 271
BcoDI GTCTC 1 cut(s) 254
BcuI ACTAGT 2 cut(s) 443, 569
BfaI CTAG 3 cut(s) 128, 444, 570
BfmI CTRYAG 1 cut(s) 300
BfuAI ACCTGC 1 cut(s) 507
BmeRI GACNNNNNGTC 1 cut(s) 401
BmiI GGNNCC 1 cut(s) 477
BmsI GCATC 1 cut(s) 76
BpmI CTGGAG 1 cut(s) 376
Bpu10I CCTNAGC 1 cut(s) 489
BpuEI CTTGAG 1 cut(s) 342
BsaAI YACGTR 1 cut(s) 335
BsaWI WCCGGW 1 cut(s) 178
BsaXI ACNNNNNCTCC 2 cut(s) 442, 472
Bsc4I CCNNNNNNNGG 1 cut(s) 130
Bse118I RCCGGY 1 cut(s) 436
Bse1I ACTGG 1 cut(s) 166
BseLI CCNNNNNNNGG 1 cut(s) 130
BseNI ACTGG 1 cut(s) 166
BseRI GAGGAG 2 cut(s) 146, 329
BseSI GKGCMC 2 cut(s) 334, 436
Bsh1285I CGRYCG 1 cut(s) 28
BshFI GGCC 2 cut(s) 78, 198
BsiEI CGRYCG 1 cut(s) 28
BsiHKAI GWGCWC 1 cut(s) 436
BsiSI CCGG 3 cut(s) 179, 437, 494
BslI CCNNNNNNNGG 1 cut(s) 130
BsmAI GTCTC 1 cut(s) 254
BsmI GAATGC 1 cut(s) 174
BsnI GGCC 2 cut(s) 78, 198
Bsp1286I GDGCHC 2 cut(s) 334, 436
Bsp143I GATC 1 cut(s) 421
BspACI CCGC 2 cut(s) 89, 125
BspANI GGCC 2 cut(s) 78, 198
BspLI GGNNCC 1 cut(s) 477
BspMI ACCTGC 1 cut(s) 507
BsrFI RCCGGY 1 cut(s) 436
BsrI ACTGG 1 cut(s) 166
BssAI RCCGGY 1 cut(s) 436
BssMI GATC 1 cut(s) 421
BssSI CACGAG 1 cut(s) 381
Bst2BI CACGAG 1 cut(s) 381
BstBAI YACGTR 1 cut(s) 335
BstC8I GCNNGC 2 cut(s) 91, 163
BstDEI CTNAG 2 cut(s) 219, 489
BstHHI GCGC 1 cut(s) 225
BstKTI GATC 1 cut(s) 424
BstMAI GTCTC 1 cut(s) 254
BstMBI GATC 1 cut(s) 421
BstMCI CGRYCG 1 cut(s) 28
BstMWI GCNNNNNNNGC 2 cut(s) 171, 245
BstNSI RCATGY 1 cut(s) 535
BstSFI CTRYAG 1 cut(s) 300
BstSLI GKGCMC 2 cut(s) 334, 436
BstXI CCANNNNNNTGG 1 cut(s) 400
BsuRI GGCC 2 cut(s) 78, 198
BveI ACCTGC 1 cut(s) 507
Cac8I GCNNGC 2 cut(s) 91, 163
CfoI GCGC 1 cut(s) 225
Cfr10I RCCGGY 1 cut(s) 436
CviAII CATG 4 cut(s) 290, 472, 532, 536
DdeI CTNAG 2 cut(s) 219, 489
DpnI GATC 1 cut(s) 423
DpnII GATC 1 cut(s) 421
DriI GACNNNNNGTC 1 cut(s) 401
Eam1105I GACNNNNNGTC 1 cut(s) 401
Eco147I AGGCCT 2 cut(s) 78, 198
Eco72I CACGTG 1 cut(s) 335
EcoT22I ATGCAT 1 cut(s) 537
FaeI CATG 4 cut(s) 293, 475, 535, 539
FatI CATG 4 cut(s) 289, 471, 531, 535
FauI CCCGC 2 cut(s) 82, 132
FblI GTMKAC 1 cut(s) 405
FspBI CTAG 3 cut(s) 128, 444, 570
GlaI GCGC 1 cut(s) 224
GsuI CTGGAG 1 cut(s) 376
HaeIII GGCC 2 cut(s) 78, 198
HapII CCGG 3 cut(s) 179, 437, 494
HhaI GCGC 1 cut(s) 225
Hin1II CATG 4 cut(s) 293, 475, 535, 539
Hin6I GCGC 1 cut(s) 223
HinP1I GCGC 1 cut(s) 223
HindIII AAGCTT 1 cut(s) 45
HinfI GANTC 2 cut(s) 134, 152
HpaII CCGG 3 cut(s) 179, 437, 494
HphI GGTGA 1 cut(s) 113
Hpy166II GTNNAC 2 cut(s) 406, 434
Hpy188I TCNGA 5 cut(s) 139, 151, 157, 259, 279
Hpy188III TCNNGA 2 cut(s) 383, 393
Hpy8I GTNNAC 2 cut(s) 406, 434
HpyAV CCTTC 3 cut(s) 59, 200, 361
HpyCH4IV ACGT 1 cut(s) 334
HpyCH4V TGCA 5 cut(s) 239, 284, 434, 516, 535
HpyF10VI GCNNNNNNNGC 2 cut(s) 171, 245
HpyF3I CTNAG 2 cut(s) 219, 489
HpySE526I ACGT 1 cut(s) 334
Hsp92II CATG 4 cut(s) 293, 475, 535, 539
HspAI GCGC 1 cut(s) 223
Kzo9I GATC 1 cut(s) 421
LmnI GCTCC 3 cut(s) 152, 370, 481
LweI GCATC 1 cut(s) 76
MaeI CTAG 3 cut(s) 128, 444, 570
MaeII ACGT 1 cut(s) 334
MaeIII GTNAC 3 cut(s) 383, 467, 565
MalI GATC 1 cut(s) 423
MboI GATC 1 cut(s) 421
MboII GAAGA 2 cut(s) 376, 509
MhlI GDGCHC 2 cut(s) 334, 436
MluCI AATT 5 cut(s) 19, 111, 415, 500, 541
MlyI GAGTC 1 cut(s) 143
MmeI TCCRAC 2 cut(s) 117, 428
MnlI CCTC 7 cut(s) 89, 117, 124, 244, 307, 444, 495
Mph1103I ATGCAT 1 cut(s) 537
MseI TTAA 1 cut(s) 72
MslI CAYNNNNRTG 1 cut(s) 359
MspI CCGG 3 cut(s) 179, 437, 494
Mva1269I GAATGC 1 cut(s) 174
MwoI GCNNNNNNNGC 2 cut(s) 171, 245
NdeII GATC 1 cut(s) 421
NlaIII CATG 4 cut(s) 293, 475, 535, 539
NlaIV GGNNCC 1 cut(s) 477
NmuCI GTSAC 1 cut(s) 383
NsiI ATGCAT 1 cut(s) 537
NspI RCATGY 1 cut(s) 535
OliI CACNNNNGTG 1 cut(s) 359
PceI AGGCCT 2 cut(s) 78, 198
PctI GAATGC 1 cut(s) 174
PfeI GAWTC 1 cut(s) 152
PleI GAGTC 1 cut(s) 142
PmaCI CACGTG 1 cut(s) 335
PmlI CACGTG 1 cut(s) 335
PpsI GAGTC 1 cut(s) 142
Ppu21I YACGTR 1 cut(s) 335
PspCI CACGTG 1 cut(s) 335
PspN4I GGNNCC 1 cut(s) 477
RseI CAYNNNNRTG 1 cut(s) 359
SaqAI TTAA 1 cut(s) 72
Sau3AI GATC 1 cut(s) 421
SchI GAGTC 1 cut(s) 143
SduI GDGCHC 2 cut(s) 334, 436
SetI ASST 9 cut(s) 49, 149, 192, 255, 301, 337, 375, 400, 521
SfaNI GCATC 1 cut(s) 76
SfcI CTRYAG 1 cut(s) 300
SgrAI CRCCGGYG 1 cut(s) 436
SmiMI CAYNNNNRTG 1 cut(s) 359
SmlI CTYRAG 1 cut(s) 357
SmoI CTYRAG 1 cut(s) 357
SpeI ACTAGT 2 cut(s) 443, 569
Sse9I AATT 5 cut(s) 19, 111, 415, 500, 541
SseBI AGGCCT 2 cut(s) 78, 198
SsiI CCGC 2 cut(s) 89, 125
SspMI CTAG 3 cut(s) 128, 444, 570
StuI AGGCCT 2 cut(s) 78, 198
TaiI ACGT 1 cut(s) 337
TaqI TCGA 1 cut(s) 109
TaqII GACCGA 1 cut(s) 42
TasI AATT 5 cut(s) 19, 111, 415, 500, 541
TfiI GAWTC 1 cut(s) 152
Tru1I TTAA 1 cut(s) 72
Tru9I TTAA 1 cut(s) 72
TseFI GTSAC 1 cut(s) 383
Tsp45I GTSAC 1 cut(s) 383
TspDTI ATGAA 2 cut(s) 107, 335
TspGWI ACGGA 1 cut(s) 113
VneI GTGCAC 1 cut(s) 432
XapI RAATTY 1 cut(s) 111
XceI RCATGY 1 cut(s) 535
XmiI GTMKAC 1 cut(s) 405
XspI CTAG 3 cut(s) 128, 444, 570
Zsp2I ATGCAT 1 cut(s) 537
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.