FvH4_6g23072

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000090
Physical Location & Seq
Reverse (-)
16894614 .. 16897248
2635 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g23072.t1

Sequence Viewer

Length: 1245 bp
ATGTCTGGGATGTTTAAAGCAACACTGAACAAGACCAAGGACAACAATACGCATATGTACCATCCACCAAACCGTCCTCTATCACGCCCTCATCCTCAACCATCTAGACAACCGTCATTATCAACTCCAAATAAGGAGAGCCAGTTTGTAGGTGGAGTTGCCCGTTCTGCGCCTAAGTTCATATCTCAGGGACATATAAAGAAAACTTATGGCAATATGCTAAGGTCAGGAAGTCATGCTGCATCCAATTCCACAAATAAGAGAACTCAAATTGAGATGGATGATGAGCAAATTAATCCAACTGGAAATTGTCGCGAGCCTGTGAAGAAAGGGTGTGGCATTTCAAAGGAGCCGAAAACTTCTGCTGTGATCAATCCAAAAAAGAAGAGAGTTGAAATCCAAATGGACTTTGAGCACTATACTCCAGATGGGAATTCTGACCCTCCTTTAGTTCCAGATCAACCTCTGAAGAAGACCCGTGGCATTACAATAGGATTGAAAGCGTCTAATATTACTAACTTTGACTTCGACTGGACTGACTTGGAGCTGAGGAGATTTGTTGAGAAGAAAATGGGAAAGGCATATGGATCTTGGAGAAACAAATTGCATGGGCATTTTAAAAAGTATGCTCATGATGTAGAATATGCTCGAGCACACCCGCTTGAAGAAAAACTTTTTGGTGAAAGATCACTAGATGAATGGGAGTGGCTATGTGACGAGGTGTTCATGGATGAATCCTATGTGAAACGAAGTCAAAAAAATGCTGAAAATCGAAATAAAAAAGAATATAATCATTGTGGAGGTTCACGGCCTTACCAAAAACATATGGAAGCTGCACTTCAGAAAGGTAAAAAGGTGACTTTTGTCGAGAATTGGACTGCAGTGCATCAACATCAGGATGGTCAATGGATCAACGAAGCAGCTGAACAAAGAGGGAACAAAATGTTAGCAGAATTGAATCAAACTAAGGAGAAGCTAGCTAAAGTTCTTGGGGCAACCTCACTTGACGAGATAGAAGTTCCAGTTTCAATGCAGCTAAATATCTTGGAAAAAGGTGTTGGAAAGGCAAAGGGTAGAGGCATTCGCGGTCTGGGTTATGGTCCACGAAAAGAATGCAACTCTTCTTCCGAGAGTGGTTATGATGTTTATGATAATGAAGATGATGATGATGTTTATGATAATGAGGATGATGATGTGAATATGTATGGGGATAGAGAAGGAGAAGAAGATGAGGGTGCAGACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

415

Amino Acids

47.02

Weight (kDa)

6.72

Isoelectric Point (pI)

44.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transposase_24 PF03004 233 - 369 1.3e-13 Plant transposase (Ptta/En/Spm family)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000090)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18340 FvH4_2g08421 FvH4_3g05430 FvH4_3g26318 FvH4_3g43970 FvH4_5g24831 FvH4_6g20331 FvH4_6g23072 FvH4_7g02471 FvH4_7g02601 FvH4_7g09790 FvH4_7g09790 FvH4_7g09790 FvH4_7g09790
malus_domestica MD09G1277700.v1.1
pyrus_communis pycom14g05970 pycom395g00100
rosa_chinensis RchiOBHm_Chr1g0329081 RchiOBHm_Chr1g0332631 RchiOBHm_Chr1g0341051 RchiOBHm_Chr1g0346821 RchiOBHm_Chr1g0346841 RchiOBHm_Chr1g0377301 RchiOBHm_Chr1g0378881 RchiOBHm_Chr1g0381361 RchiOBHm_Chr2g0094421 RchiOBHm_Chr2g0115791 RchiOBHm_Chr2g0131391 RchiOBHm_Chr3g0469161 RchiOBHm_Chr3g0477491 RchiOBHm_Chr4g0397121 RchiOBHm_Chr4g0403221 RchiOBHm_Chr4g0403811 RchiOBHm_Chr4g0418081 RchiOBHm_Chr4g0434301 RchiOBHm_Chr5g0004171 RchiOBHm_Chr5g0007651 RchiOBHm_Chr5g0025151 RchiOBHm_Chr5g0029021 RchiOBHm_Chr5g0036581 RchiOBHm_Chr5g0040531 RchiOBHm_Chr5g0041581 RchiOBHm_Chr5g0041591 RchiOBHm_Chr5g0055171 RchiOBHm_Chr5g0059931 RchiOBHm_Chr5g0070861 RchiOBHm_Chr5g0072491 RchiOBHm_Chr5g0073831 RchiOBHm_Chr5g0076701 RchiOBHm_Chr6g0264941 RchiOBHm_Chr6g0268711 RchiOBHm_Chr6g0272081 RchiOBHm_Chr7g0180801 RchiOBHm_Chr7g0206041 RchiOBHm_Chr7g0206051 RchiOBHm_Chr7g0206191 RchiOBHm_Chr7g0207401 RchiOBHm_Chr7g0208561 RchiOBHm_Chr7g0208571 RchiOBHm_Chr7g0232661 RchiOBHm_Chr7g0238901
rosa_laevigata RLG00000003152 RLG00000007513 RLG00000010392 RLG00000011803 RLG00000012560 RLG00000014764 RLG00000017712 RLG00000017809 RLG00000017860 RLG00000018875 RLG00000020741 RLG00000021294 RLG00000021737 RLG00000023224 RLG00000023340 RLG00000025142 RLG00000027945 RLG00000028772 RLG00000028775 RLG00000028776 RLG00000029536 RLG00000029993 RLG00000030256 RLG00000030594 RLG00000030697 RLG00000032707 RLG00000035344 RLG00000035458 RLG00000036306 RLG00000036953
rosa_multiflora Rmu_co8065394.1_g000001 Rmu_co8424083.1_g000001 Rmu_sc0000012.1_g000007 Rmu_sc0000073.1_g000003 Rmu_sc0000177.1_g000022 Rmu_sc0000356.1_g000009 Rmu_sc0000433.1_g000025 Rmu_sc0001229.1_g000008 Rmu_sc0001478.1_g000007 Rmu_sc0001552.1_g000046 Rmu_sc0001731.1_g000001 Rmu_sc0001731.1_g000004 Rmu_sc0001942.1_g000088 Rmu_sc0002530.1_g000034 Rmu_sc0002758.1_g000006 Rmu_sc0003033.1_g000034 Rmu_sc0003158.1_g000009 Rmu_sc0003193.1_g000001 Rmu_sc0003314.1_g000041 Rmu_sc0003756.1_g000007 Rmu_sc0003895.1_g000016 Rmu_sc0004149.1_g000005 Rmu_sc0004413.1_g000038 Rmu_sc0004509.1_g000025 Rmu_sc0005142.1_g000008 Rmu_sc0005291.1_g000005 Rmu_sc0005772.1_g000001 Rmu_sc0005962.1_g000002 Rmu_sc0006223.1_g000037 Rmu_sc0006898.1_g000018 Rmu_sc0007822.1_g000006 Rmu_sc0007822.1_g000007 Rmu_sc0015982.1_g000001 Rmu_sc0023577.1_g000001 Rmu_sc0026009.1_g000013 Rmu_ssc0000264.1_g000011 Rmu_ssc0000264.1_g000014 Rmu_ssc0000467.1_g000035
rosa_roxburghii Rroxscaffold_1G00003310 Rroxscaffold_1G00003440 Rroxscaffold_1G00025390 Rroxscaffold_1G00027650 Rroxscaffold_1G00035520 Rroxscaffold_1G00039720 Rroxscaffold_2G00096880 Rroxscaffold_2G00138110 Rroxscaffold_3G00223540 Rroxscaffold_3G00226400 Rroxscaffold_3G00249970 Rroxscaffold_3G00251230 Rroxscaffold_4G00308110 Rroxscaffold_4G00308440 Rroxscaffold_4G00308470 Rroxscaffold_4G00311680 Rroxscaffold_4G00311690 Rroxscaffold_4G00330900 Rroxscaffold_5G00342170 Rroxscaffold_5G00376290 Rroxscaffold_6G00392450 Rroxscaffold_6G00421400 Rroxscaffold_6G00430840 Rroxscaffold_7G00171590 Rroxscaffold_7G00178520 Rroxscaffold_7G00192720
rosa_rugosa Rorug01G0184200 Rorug02G0001800 Rorug02G0296300.1 Rorug02G0296400 Rorug02G0395800 Rorug03G0045600 Rorug03G0045700 Rorug03G0273100 Rorug04G0060900 Rorug04G0073900 Rorug04G0082100 Rorug04G0083700 Rorug04G0140600 Rorug04G0147600 Rorug04G0202000 Rorug04G0365300 Rorug05G0164600 Rorug05G0164700 Rorug05G0164800 Rorug05G0313400 Rorug05G0460400 Rorug05G0460500 Rorug06G0004700 Rorug06G0087800 Rorug07G0040400 Rorug07G0147000 Rorug07G0164100 Rorug07G0183900 Rorug07G0313600
rosa_samantha Rh1AG151200 Rh1AG190200 Rh1AG201300 Rh1AG409200 Rh1BG069600 Rh1BG167900 Rh1BG168100 Rh1BG221200 Rh1BG231700 Rh1BG279700 Rh1BG335200 Rh1CG100500 Rh1CG142400 Rh1CG175600 Rh1CG186200 Rh1CG348700 Rh1DG025200 Rh1DG040900 Rh1DG107900 Rh1DG108000 Rh1DG132100 Rh1DG198700 Rh1DG198900 Rh1DG248100 Rh1DG311000 Rh1DG366700 Rh2AG005300 Rh2AG262100 Rh2CG263100 Rh2CG313000 Rh2CG313100 Rh2CG335400 Rh2CG392500 Rh2CG576000 Rh2DG091000 Rh3AG032000 Rh3BG032400 Rh3CG031100 Rh3CG163600 Rh3CG311100 Rh3DG032000 Rh4AG091500 Rh4BG086500 Rh4BG111300 Rh4BG139900 Rh4CG015000 Rh4CG099800 Rh4DG210900 Rh4DG234600 Rh4DG282500 Rh5AG075100 Rh5AG228600 Rh5AG326300 Rh5AG464100 Rh5BG265900 Rh5BG284000 Rh5BG284900 Rh5CG337600 Rh5CG394700 Rh5DG206500 Rh5DG285000 Rh5DG293700 Rh5DG403900 Rh5DG469800 Rh6AG045500 Rh6AG242800 Rh6BG073100 Rh6BG202400 Rh6CG179100 Rh6CG202800 Rh6DG170800 Rh6DG194300 Rh6DG440100 Rh6DG445600 Rh6DG470700 Rh7BG262200 Rh7BG295500 Rh7BG295800 Rh7CG210600 Rh7CG421500 Rh7DG233400 Rh7DG233500 Rh7DG238100 Rh7DG238200 Rh7DG245500
rosa_wichuraiana Rw1G016920 Rw1G022060 Rw1G028030 Rw2G007760 Rw3G016140 Rw3G020210 Rw4G012320 Rw4G026900 Rw4G034750 Rw5G028220 Rw6G003840 Rw6G004130 Rw7G032360 Rw7G038920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 315, 1086
AciI CCGC 2 cut(s) 659, 1086
AclWI GGATC 2 cut(s) 595, 917
AcsI RAATTY 1 cut(s) 433
AcuI CTGAAG 2 cut(s) 488, 824
AfaI GTAC 1 cut(s) 59
AgsI TTSAA 6 cut(s) 345, 395, 499, 665, 958, 1029
AjuI GAANNNNNNNTTGG 4 cut(s) 660, 692, 1041, 1073
AluBI AGCT 6 cut(s) 547, 833, 923, 976, 980, 1036
AluI AGCT 6 cut(s) 547, 833, 923, 976, 980, 1036
Alw21I GWGCWC 2 cut(s) 417, 655
AlwI GGATC 2 cut(s) 595, 917
Ama87I CYCGRG 1 cut(s) 648
AoxI GGCC 1 cut(s) 809
ApeKI GCWGC 4 cut(s) 239, 833, 920, 1033
ApoI RAATTY 1 cut(s) 433
AseI ATTAAT 1 cut(s) 294
AspLEI GCGC 1 cut(s) 172
AspS9I GGNCC 1 cut(s) 1100
AsuHPI GGTGA 2 cut(s) 692, 868
AsuNHI GCTAGC 1 cut(s) 976
AvaI CYCGRG 1 cut(s) 648
AvaII GGWCC 1 cut(s) 1100
BbsI GAAGAC 1 cut(s) 479
Bbv12I GWGCWC 2 cut(s) 417, 655
BbvCI CCTCAGC 1 cut(s) 548
BbvI GCAGC 4 cut(s) 226, 820, 932, 1045
BccI CCATC 5 cut(s) 69, 109, 271, 422, 893
BceAI ACGGC 1 cut(s) 824
BcgI CGANNNNNNTGC 2 cut(s) 1095, 1129
BclI TGATCA 1 cut(s) 369
BfaI CTAG 4 cut(s) 105, 692, 977, 1243
BfmI CTRYAG 1 cut(s) 879
BisI GCNGC 4 cut(s) 240, 834, 921, 1034
BlsI GCNGC 4 cut(s) 241, 835, 922, 1035
Bme18I GGWCC 1 cut(s) 1100
BmeT110I CYCGRG 1 cut(s) 648
BmgT120I GGNCC 1 cut(s) 1100
BmiI GGNNCC 1 cut(s) 351
BmsI GCATC 2 cut(s) 251, 895
BmtI GCTAGC 1 cut(s) 980
BoxI GACNNNNGTC 2 cut(s) 112, 863
BpiI GAAGAC 1 cut(s) 479
BpmI CTGGAG 1 cut(s) 408
Bpu10I CCTNAGC 2 cut(s) 221, 548
BsaJI CCNNGG 2 cut(s) 36, 478
BsaXI ACNNNNNCTCC 2 cut(s) 128, 158
Bse1I ACTGG 4 cut(s) 142, 307, 536, 1022
BseDI CCNNGG 2 cut(s) 36, 478
BseGI GGATG 8 cut(s) 15, 61, 91, 242, 286, 736, 904, 1192
BseMII CTCAG 2 cut(s) 200, 539
BseNI ACTGG 4 cut(s) 142, 307, 536, 1022
BseRI GAGGAG 1 cut(s) 565
BseXI GCAGC 4 cut(s) 226, 820, 932, 1045
BsgI GTGCAG 1 cut(s) 819
Bsh1236I CGCG 2 cut(s) 315, 1086
BshFI GGCC 1 cut(s) 811
BsiHKAI GWGCWC 2 cut(s) 417, 655
BsiHKCI CYCGRG 1 cut(s) 648
BslFI GGGAC 1 cut(s) 204
BsmFI GGGAC 1 cut(s) 204
BsmI GAATGC 2 cut(s) 1080, 1118
BsnI GGCC 1 cut(s) 811
BsoBI CYCGRG 1 cut(s) 648
Bsp1286I GDGCHC 2 cut(s) 417, 655
Bsp143I GATC 5 cut(s) 369, 457, 587, 686, 909
Bsp68I TCGCGA 1 cut(s) 315
BspACI CCGC 2 cut(s) 659, 1086
BspANI GGCC 1 cut(s) 811
BspCNI CTCAG 2 cut(s) 199, 540
BspFNI CGCG 2 cut(s) 315, 1086
BspHI TCATGA 1 cut(s) 631
BspLI GGNNCC 1 cut(s) 351
BspMAI CTGCAG 1 cut(s) 883
BspOI GCTAGC 1 cut(s) 980
BspPI GGATC 2 cut(s) 595, 917
BsrI ACTGG 4 cut(s) 142, 307, 536, 1022
BssECI CCNNGG 2 cut(s) 36, 478
BssMI GATC 5 cut(s) 369, 457, 587, 686, 909
BssT1I CCWWGG 1 cut(s) 36
Bst4CI ACNGT 2 cut(s) 74, 114
Bst6I CTCTTC 2 cut(s) 380, 1126
BstC8I GCNNGC 2 cut(s) 317, 978
BstDEI CTNAG 5 cut(s) 174, 186, 221, 548, 966
BstDSI CCRYGG 1 cut(s) 478
BstF5I GGATG 8 cut(s) 15, 61, 91, 242, 286, 736, 904, 1192
BstFNI CGCG 2 cut(s) 315, 1086
BstHHI GCGC 1 cut(s) 172
BstKTI GATC 5 cut(s) 372, 460, 590, 689, 912
BstMBI GATC 5 cut(s) 369, 457, 587, 686, 909
BstMWI GCNNNNNNNGC 1 cut(s) 167
BstPAI GACNNNNGTC 2 cut(s) 112, 863
BstSFI CTRYAG 1 cut(s) 879
BstUI CGCG 2 cut(s) 315, 1086
BstV1I GCAGC 4 cut(s) 226, 820, 932, 1045
BstV2I GAAGAC 1 cut(s) 479
BstX2I RGATCY 1 cut(s) 587
BstYI RGATCY 1 cut(s) 587
BsuRI GGCC 1 cut(s) 811
BtgI CCRYGG 1 cut(s) 478
BtsCI GGATG 8 cut(s) 15, 61, 91, 242, 286, 736, 904, 1192
BtsI GCAGTG 1 cut(s) 888
BtsIMutI CAGTG 2 cut(s) 23, 888
BtuMI TCGCGA 1 cut(s) 315
Cac8I GCNNGC 2 cut(s) 317, 978
CciI TCATGA 1 cut(s) 631
CfoI GCGC 1 cut(s) 172
Cfr13I GGNCC 1 cut(s) 1100
CseI GACGC 1 cut(s) 492
Csp6I GTAC 1 cut(s) 58
CviAII CATG 4 cut(s) 236, 608, 632, 727
CviQI GTAC 1 cut(s) 58
DdeI CTNAG 5 cut(s) 174, 186, 221, 548, 966
DpnI GATC 5 cut(s) 371, 459, 589, 688, 911
DpnII GATC 5 cut(s) 369, 457, 587, 686, 909
DraI TTTAAA 2 cut(s) 16, 619
Eam1104I CTCTTC 2 cut(s) 380, 1126
EarI CTCTTC 2 cut(s) 380, 1126
Eco130I CCWWGG 1 cut(s) 36
Eco47I GGWCC 1 cut(s) 1100
Eco57I CTGAAG 2 cut(s) 488, 824
Eco88I CYCGRG 1 cut(s) 648
EcoRI GAATTC 1 cut(s) 433
EcoT14I CCWWGG 1 cut(s) 36
ErhI CCWWGG 1 cut(s) 36
FaeI CATG 4 cut(s) 239, 611, 635, 730
FalI AAGNNNNNCTT 4 cut(s) 657, 689, 822, 854
FaqI GGGAC 1 cut(s) 204
FatI CATG 4 cut(s) 235, 607, 631, 726
FauI CCCGC 1 cut(s) 666
FauNDI CATATG 3 cut(s) 54, 583, 825
FbaI TGATCA 1 cut(s) 369
Fnu4HI GCNGC 4 cut(s) 240, 834, 921, 1034
FokI GGATG 8 cut(s) 22, 48, 78, 229, 293, 743, 911, 1199
Fsp4HI GCNGC 4 cut(s) 240, 834, 921, 1034
FspBI CTAG 4 cut(s) 105, 692, 977, 1243
GlaI GCGC 1 cut(s) 171
GluI GCNGC 4 cut(s) 240, 834, 921, 1034
GsuI CTGGAG 1 cut(s) 408
HaeIII GGCC 1 cut(s) 811
HgaI GACGC 1 cut(s) 492
HhaI GCGC 1 cut(s) 172
Hin1II CATG 4 cut(s) 239, 611, 635, 730
Hin6I GCGC 1 cut(s) 170
HinP1I GCGC 1 cut(s) 170
HinfI GANTC 2 cut(s) 734, 958
HphI GGTGA 2 cut(s) 692, 868
Hpy166II GTNNAC 2 cut(s) 806, 1103
Hpy188I TCNGA 4 cut(s) 439, 468, 843, 1129
Hpy188III TCNNGA 8 cut(s) 105, 228, 314, 425, 455, 632, 868, 896
Hpy8I GTNNAC 2 cut(s) 806, 1103
HpyAV CCTTC 1 cut(s) 1211
HpyCH4III ACNGT 2 cut(s) 74, 114
HpyCH4V TGCA 8 cut(s) 242, 607, 836, 881, 886, 1033, 1116, 1238
HpyF10VI GCNNNNNNNGC 1 cut(s) 167
HpyF3I CTNAG 5 cut(s) 174, 186, 221, 548, 966
Hsp92II CATG 4 cut(s) 239, 611, 635, 730
HspAI GCGC 1 cut(s) 170
Ksp22I TGATCA 1 cut(s) 369
Kzo9I GATC 5 cut(s) 369, 457, 587, 686, 909
LmnI GCTCC 2 cut(s) 349, 544
Lsp1109I GCAGC 4 cut(s) 226, 820, 932, 1045
LweI GCATC 2 cut(s) 251, 895
MaeI CTAG 4 cut(s) 105, 692, 977, 1243
MaeIII GTNAC 2 cut(s) 713, 856
MalI GATC 5 cut(s) 371, 459, 589, 688, 911
MboI GATC 5 cut(s) 369, 457, 587, 686, 909
MflI RGATCY 1 cut(s) 587
MhlI GDGCHC 2 cut(s) 417, 655
MluCI AATT 8 cut(s) 247, 270, 291, 307, 433, 602, 871, 953
MmeI TCCRAC 2 cut(s) 323, 1039
MseI TTAA 3 cut(s) 15, 294, 618
MslI CAYNNNNRTG 1 cut(s) 897
MspA1I CMGCKG 1 cut(s) 923
Mva1269I GAATGC 2 cut(s) 1080, 1118
MvnI CGCG 2 cut(s) 315, 1086
MwoI GCNNNNNNNGC 1 cut(s) 167
NdeI CATATG 3 cut(s) 54, 583, 825
NdeII GATC 5 cut(s) 369, 457, 587, 686, 909
NheI GCTAGC 1 cut(s) 976
NlaIII CATG 4 cut(s) 239, 611, 635, 730
NlaIV GGNNCC 1 cut(s) 351
NmuCI GTSAC 2 cut(s) 713, 856
NruI TCGCGA 1 cut(s) 315
PaeR7I CTCGAG 1 cut(s) 648
PagI TCATGA 1 cut(s) 631
PctI GAATGC 2 cut(s) 1080, 1118
PfeI GAWTC 2 cut(s) 734, 958
PkrI GCNGC 4 cut(s) 241, 835, 922, 1035
PshAI GACNNNNGTC 2 cut(s) 112, 863
PshBI ATTAAT 1 cut(s) 294
PspN4I GGNNCC 1 cut(s) 351
PspPI GGNCC 1 cut(s) 1100
PspXI VCTCGAGB 1 cut(s) 648
PstI CTGCAG 1 cut(s) 883
PsuI RGATCY 1 cut(s) 587
PvuII CAGCTG 1 cut(s) 923
RruI TCGCGA 1 cut(s) 315
RsaI GTAC 1 cut(s) 59
RsaNI GTAC 1 cut(s) 58
RseI CAYNNNNRTG 1 cut(s) 897
SaqAI TTAA 3 cut(s) 15, 294, 618
SatI GCNGC 4 cut(s) 240, 834, 921, 1034
Sau3AI GATC 5 cut(s) 369, 457, 587, 686, 909
Sau96I GGNCC 1 cut(s) 1100
SduI GDGCHC 2 cut(s) 417, 655
SfaNI GCATC 2 cut(s) 251, 895
SfcI CTRYAG 1 cut(s) 879
Sfr274I CTCGAG 1 cut(s) 648
SinI GGWCC 1 cut(s) 1100
SlaI CTCGAG 1 cut(s) 648
SmiMI CAYNNNNRTG 1 cut(s) 897
SmlI CTYRAG 1 cut(s) 648
SmoI CTYRAG 1 cut(s) 648
Sse9I AATT 8 cut(s) 247, 270, 291, 307, 433, 602, 871, 953
SsiI CCGC 2 cut(s) 659, 1086
SspI AATATT 1 cut(s) 511
SspMI CTAG 4 cut(s) 105, 692, 977, 1243
StyI CCWWGG 1 cut(s) 36
TaaI ACNGT 2 cut(s) 74, 114
TaqI TCGA 4 cut(s) 528, 649, 772, 867
TasI AATT 8 cut(s) 247, 270, 291, 307, 433, 602, 871, 953
TfiI GAWTC 2 cut(s) 734, 958
Tru1I TTAA 3 cut(s) 15, 294, 618
Tru9I TTAA 3 cut(s) 15, 294, 618
TscAI CASTG 2 cut(s) 30, 888
TseFI GTSAC 2 cut(s) 713, 856
TseI GCWGC 4 cut(s) 239, 833, 920, 1033
Tsp45I GTSAC 2 cut(s) 713, 856
TspDTI ATGAA 5 cut(s) 169, 711, 715, 747, 1170
TspRI CASTG 2 cut(s) 30, 888
VpaK11BI GGWCC 1 cut(s) 1100
VspI ATTAAT 1 cut(s) 294
XapI RAATTY 1 cut(s) 433
XbaI TCTAGA 1 cut(s) 104
XcmI CCANNNNNNNNNTGG 1 cut(s) 149
XhoI CTCGAG 1 cut(s) 648
XspI CTAG 4 cut(s) 105, 692, 977, 1243
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.